Rh2CG627900

Sister chromatid cohesion 1 protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
80164537 .. 80165008
472 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG627900.1

Sequence Viewer

Length: 396 bp
ATGATGCTAGTGATTTGGTTGCTAAAAGAAAAAAAAGTTCCCAAAAATGCCTATGCTGTTTGGAGAACTTGTCAAAGTAGAAATCTTGCCCAGAATTTCTTGGAGCCACTGATATCTAACGTTTCGCAAGAACTTAGGTCCCTCTTATGCAAAAGGAAACTGAGGAAATTAAAGATTACTCCAGAGAAGTTAGATTTGTTGGACTGTCGAAGGACTGGTATATCAGAGCAAATAGAGGTTGTAAATACAGATACTGTTGAACCTCCAGCAGACTTCCATGTGTTGGAATATCCATGTACTGTTGGATTAGAACAGGCAGAAATTGCACCGGACACACCTGTTCTTCGCTCAAAATCAATCAAATCAAGAGTCCCGAAGTTCCTGATAAGAAATTAA

Protein Analysis

131

Amino Acids

15.11

Weight (kDa)

9.44

Isoelectric Point (pI)

53.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 283
AclI AACGTT 1 cut(s) 120
AcsI RAATTY 1 cut(s) 94
AfaI GTAC 1 cut(s) 298
AfiI CCNNNNNNNGG 1 cut(s) 283
AgsI TTSAA 1 cut(s) 260
AlwNI CAGNNNCTG 1 cut(s) 254
ApoI RAATTY 1 cut(s) 94
ArsI GACNNNNNNTTYG 2 cut(s) 354, 386
AspS9I GGNCC 1 cut(s) 138
AvaII GGWCC 1 cut(s) 138
BfaI CTAG 1 cut(s) 8
Bme18I GGWCC 1 cut(s) 138
BmgT120I GGNCC 1 cut(s) 138
BmiI GGNNCC 2 cut(s) 105, 140
BpmI CTGGAG 2 cut(s) 165, 249
BsaWI WCCGGW 1 cut(s) 328
BsaXI ACNNNNNCTCC 2 cut(s) 55, 85
Bsc4I CCNNNNNNNGG 1 cut(s) 283
Bse1I ACTGG 1 cut(s) 220
BseLI CCNNNNNNNGG 1 cut(s) 283
BseMII CTCAG 1 cut(s) 152
BseNI ACTGG 1 cut(s) 220
BsiSI CCGG 1 cut(s) 329
BslFI GGGAC 2 cut(s) 124, 356
BslI CCNNNNNNNGG 1 cut(s) 283
BsmFI GGGAC 2 cut(s) 124, 356
BspCNI CTCAG 1 cut(s) 153
BspLI GGNNCC 2 cut(s) 105, 140
BsrI ACTGG 1 cut(s) 220
Bst4CI ACNGT 3 cut(s) 206, 256, 301
BstAPI GCANNNNNTGC 1 cut(s) 323
BstDEI CTNAG 2 cut(s) 134, 161
BstMWI GCNNNNNNNGC 1 cut(s) 323
BtsIMutI CAGTG 1 cut(s) 107
CaiI CAGNNNCTG 1 cut(s) 254
Cfr13I GGNCC 1 cut(s) 138
Csp6I GTAC 1 cut(s) 297
CviAII CATG 2 cut(s) 278, 294
CviJI RGCY 1 cut(s) 106
CviKI_1 RGCY 1 cut(s) 106
CviQI GTAC 1 cut(s) 297
DdeI CTNAG 2 cut(s) 134, 161
Eco32I GATATC 1 cut(s) 114
Eco47I GGWCC 1 cut(s) 138
EcoO109I RGGNCCY 1 cut(s) 138
EcoRV GATATC 1 cut(s) 114
FaeI CATG 2 cut(s) 281, 297
FaiI YATR 5 cut(s) 54, 148, 221, 279, 295
FaqI GGGAC 2 cut(s) 124, 356
FatI CATG 2 cut(s) 277, 293
FspBI CTAG 1 cut(s) 8
GsuI CTGGAG 2 cut(s) 165, 249
HapII CCGG 1 cut(s) 329
Hin1II CATG 2 cut(s) 281, 297
HinfI GANTC 1 cut(s) 369
HpaII CCGG 1 cut(s) 329
Hpy188I TCNGA 1 cut(s) 226
Hpy188III TCNNGA 4 cut(s) 182, 366, 373, 382
HpyAV CCTTC 1 cut(s) 204
HpyCH4III ACNGT 3 cut(s) 206, 256, 301
HpyCH4IV ACGT 1 cut(s) 120
HpyCH4V TGCA 2 cut(s) 150, 326
HpyF10VI GCNNNNNNNGC 1 cut(s) 323
HpyF3I CTNAG 2 cut(s) 134, 161
HpySE526I ACGT 1 cut(s) 120
Hsp92II CATG 2 cut(s) 281, 297
LmnI GCTCC 1 cut(s) 103
LpnPI CCDG 7 cut(s) 104, 195, 201, 279, 299, 342, 351
MaeI CTAG 1 cut(s) 8
MaeII ACGT 1 cut(s) 120
MboII GAAGA 1 cut(s) 335
MluCI AATT 4 cut(s) 94, 167, 321, 391
MlyI GAGTC 1 cut(s) 378
MmeI TCCRAC 3 cut(s) 180, 264, 283
MnlI CCTC 4 cut(s) 152, 156, 229, 273
MseI TTAA 2 cut(s) 170, 394
MspI CCGG 1 cut(s) 329
MwoI GCNNNNNNNGC 1 cut(s) 323
NlaIII CATG 2 cut(s) 281, 297
NlaIV GGNNCC 2 cut(s) 105, 140
PflMI CCANNNNNTGG 1 cut(s) 283
PleI GAGTC 1 cut(s) 377
PpsI GAGTC 1 cut(s) 377
PpuMI RGGWCCY 1 cut(s) 138
Psp1406I AACGTT 1 cut(s) 120
Psp5II RGGWCCY 1 cut(s) 138
PspN4I GGNNCC 2 cut(s) 105, 140
PspPI GGNCC 1 cut(s) 138
PspPPI RGGWCCY 1 cut(s) 138
PstNI CAGNNNCTG 1 cut(s) 254
RsaI GTAC 1 cut(s) 298
RsaNI GTAC 1 cut(s) 297
SaqAI TTAA 2 cut(s) 170, 394
Sau96I GGNCC 1 cut(s) 138
SchI GAGTC 1 cut(s) 378
SetI ASST 5 cut(s) 123, 140, 240, 265, 340
SinI GGWCC 1 cut(s) 138
Sse9I AATT 4 cut(s) 94, 167, 321, 391
SspMI CTAG 1 cut(s) 8
TaaI ACNGT 3 cut(s) 206, 256, 301
TaiI ACGT 1 cut(s) 123
TaqI TCGA 1 cut(s) 208
TasI AATT 4 cut(s) 94, 167, 321, 391
TatI WGTACW 1 cut(s) 296
Tru1I TTAA 2 cut(s) 170, 394
Tru9I TTAA 2 cut(s) 170, 394
TscAI CASTG 1 cut(s) 114
TspRI CASTG 1 cut(s) 114
Van91I CCANNNNNTGG 1 cut(s) 283
VpaK11BI GGWCC 1 cut(s) 138
XapI RAATTY 1 cut(s) 94
XspI CTAG 1 cut(s) 8
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.