Rroxscaffold_2G00077660

Sister chromatid cohesion 1 protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
1169474 .. 1180469
10996 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00077660.1

Sequence Viewer

Length: 4431 bp
ATGGTCTACTCACAGAGCTTGTTAGCAAGAAGAGGGCCTTTGGGCGCCATATGGGTCGCTGCTTACTGTTTCAAGAAGCTCAAGAAGACCCAGATCACAGAGACTGACATTTTGGCCGCTATTGATAAAATTTTAAAGGATGAATGGGATGGCGTCGCATATAGAGTACTAGCCTACCTACTTCTGGGTGTTGTTCGAATATACTCGAGAAAAGTTGAATATCTTTTTGATGACTGCAATGAAGTGCTACTAGACATCAAGAAATTTGTGTTTAGCACAAAAGACAATGCACCTGCAGAAATGCTGTGTGCGGCTTATCACTCTGTTATCATACCGGATAGATTTGAACTTGATGCTTTTGATATGGGGAGCCTTGAAGATGTCAGTGGTGAACATTTGGCGTCTCACAAAGAAATCACACTTAAAGAATGTGCAGAGTGGAATGGAATAGGACGACTTTCATCAGAAATGTATGATCATGTGGAATTTGGTGCCTGCCACAGTATTTTCTCAACTTATTACACCCCAGTCAGAAGTGTACTTTCATCTCACCTGATGGACTTTGGTATGGAGTTAATAACATCGAGTAGTGGAGCTAACTCGGAAGAAATCATAGAGCAGCTTCAATGGCATAGGTTCTCTCAAGAAGAATGTGCCGACATTGATACATTTATTGGCATTGAGAAAGAGCCTCAAAACCAAGTTAAGCAATATGGTGAAGATAATGAAACCAATGGAGAGCAGATAAAGACTCCAGATATAGCAGTGCCTGAAGATGGAATTCAGGAAGATGGTCAGAAGACTCAGAAGCCTGAGATCTTTTATGGGAATAATATAGAACCTTCCTGCCATGTGATAACTGGTGAGGATCATCAAAGTGAACGAGAGGAGATGATGGAAATAGACTTGGTGCAACCAGAAAATCAGAGTTTTCAGATTACAAAAGAAGAGCATAGTCTAAGAAACTTAGAAGCTGACATGGAGAATAGGAAAAATGCTACATTTTCTCAAGAAGAATCCCTGGACCTTGATGTGCTTTCTGGGGCCAAGAAACCTCAAGAACTTGTTTGTTCATATGGAGAAGAGAATCATAACGATGAAGAGCCGACTAAGTTACAGGACATAATTGCACCAGATACCATGAAAAATATTCCAGAAGAAGATCCAGATCCCCTTTTAGTTGCAAATGATGGCAGTCCTGACACCAAGCAGCCAGATGCTCTAGGTATTACTACACCAAAATTGATGGCTGTTCCCAGACCAGTTTCCAAGAAGTCAGCTCGGTTTTCTAGGAAAAGAAAATGTGTCTTTGATGATATAATAGTGCTGCCTAATGAGGTAGTCAGGCAAAGCATACATGATGCTAGTGATTTGGTTGCTAAAAGAAAAAAAGTTCCCAAAAATGCTCATGCTGTTTGGAAAACTTGTCAAATTGGAAATCTTGCCCAGAATTTCTTGGAGCCATTGATATCTAACGTTTCGCAAGAGCTTAGGTCCCTCTTATGCAAAAGGAAACTGAGGAAATTAAAGATCACTCCAGAGAAGTTAGATTTGTTGGACTGTCAAAGGATTGGTATATCAGAGCAAATGGAGGTTGTACATACAGAAACCATTGAACCTGCAGAAGACTTGGATGTGTTAGAATATCCATGTACTGTTGGATTAGAACAAGCAGAAATTGCACCAGACACACCTGTTCTTCGCTCAAAATCAATCAAATCATTTCATAGTCCAAGGAGTCCTGAAGTTCCTGATATGGATCTAGTACGACCTGAGACATCTGGAAGGATAGAAAAAGAACCGTCTATGGGAGCAGAGCAAACTTTCCCTTCTGGAAGTGTAGAAGAAGTACCACCATCTCTAGATAGGGATGAAGAGCATGACTTCAATTTTTTGAGTGAGGAAGCTGAATTTTGCGAAGGAGTTAATCCTGAACTTGATGGGTGTTCAGTGAGAACCAGAAAGGTGGCGAGGTATTTGCACAGGCACTTTACAATTTGCAACAGTCTCCACGTGAACTTGTTGGAGGTTGCAGAACGAAGAACCAAGAAAGAAAATGCAAGGCTATTCTATGAGACACTGGTGATGAAAACTAGAGGGTTTGTGGATGTGAAGCAAGCTGATCCCTATGGCGACATTCTAATCTGGAAACTTCCCAAATGGGATCAAATGTGGGGAGATGATACCTCCCATAGAGTCACTTCTGAAACTATGTCTCTATGTCAGGATTACTGGGATGCATGGGAATCAAAATGGTCTGTTGGGTATTCTAGACAATTTATCTCATTGAATACAACTGATAAAATTTTGAAGGATGATTGGGATGTCATCGCATATAGGGTACTAGCCTACCTTCTTCTTGGTGTTGTTCGAATATACTCAAAAAAAGTTGAATACCTTTTTGATGACTGCCATGAAGTTCTAAATGAAATCAACAAGTTTGTCGTTAGCACAAAAGAGAAGGGAGACACAGATACATTTCGTGCGCCTTATGACTCTGTTACCCTACCGGAGAGGTTTGAACTTGATGCATTTGATTTGGGGCTTCCTGAAGATGTCAGTGGAGGAAATGTAGTATCCTACGAAGCTATCACACTTAAAGATTGTCCAAAGGGAAATGTAGGACAATTTTCCTCAGATATGTATGATTACGAGGAATTTGGTGCCTGCCGTGGTATCTTTTCTGCCAATTACATTCCAGGCAGAGATGTACTTTCATTTAACGGGATGGAATTGGATATGGAGTTAAGGACGTCGAGGAATGGAGCTAACCCAGAAGTAAACATGGAGAATCCTCAAGAGAGTAGGTTCTCTCAAGTAGAAACTAATGGAGAACAGATAAAGGTTGCGGATATAGCATTGTCTGAAGATGGGACTCTAGGAGAAGCAAGGCAGGAAAAGCTTCCAGACCTTAGGTCTGAGGAAAAAGGTCTGAACCATGAAACATTTTTCGGCATTGAAGAAGAGCCCCTAAACCAAGTTGAACCATTTGGTGAAGGTCATGAAACTAATGGGGAGCAAATAAAGGCTCCTGCTGTAGTCCAGTCTGTTGATGGAATTCAAGAAGAAGCAAGCCTGGAACCTTCCTGTCATGTTACATCATCTGGTGAAGATCACCACATTATTCAAGAGGAGATTATCATGCAATCAGAAAATCAAATGTGTCCGGTTACAATAGAAGACCACAATCTAAGCAACTTGGAAGCTGACAGGGGAAACCTAAAAAGTTGTACACCTGCTCAAGAAGAGAACATGGAACTTGATAAGTCTTGTGACTTAAAGAAACCTCAAAAACCTGTTTGTTCATATGGGGAAGAGAATCATAAGGATGGAGAGCCAACAAAGTTACAGGACACAATTCCACCAGATAATGTGAATTGTCAAATTACTGCTGGAAAAGATTCAGAGGCTTTAGTTGTTACTACACCAAAGTTAAGGAGGGTTATTCCCACACCAGCTATGAGGAAGGCTGCTCAAATCTCTAGGAAAAGGAAAAGGAAAAGGAAATGTACCTTTGATGAAATGGTAGTGCTGCCTAATACGGTAATCAAGCAAAGCATAAATGATGCGAGTGACTTGGTTTCAAAAAGAAGAAAGGTTCCTGAAACTGCCCTTGCTGCCTGGAAAACCTGTCAGCTTAGAAACCTATCCCGGAATTTCTTGGAACCATTGATACCTAGTGTTTCAGAGGAGATTAGGTCGCTCTTCCACAAAAGCATAATAGAATCTGCTGAAACTGTTGAACCTCCAGAAAAGCTAGATGTGTTAGAACCTCCAAGTACTGGTAGACCAGAGCAAGTAGAAATTGCACCAGGGCCACCTGTCCTTGAGCAAATAGAAATTGAGCCTGGAACCCCTATCCTTGAGAAAATAGAAATTGCACCAGGAACGCCTGTCCTTCACTCAACATCAATGAAATCATTCAATAGTCCAAAGAGCCCCGAAGCTCCTGATATGGATATGGTGATAGCTGAGCCATCCGGAAGGATGGAGGAAGAGCCATCTATGGGAAATGAACAAGCTTACCCGTCTGAAAGTGTAGAAGTACCATATTTGGACAAGGTTCAAGAACATGATTTCAATTTATTGAATGAGGAACCTGATTTATGTGAGGGAGTTAACCCTGAACTGGATGGGTGGTCTAAGAGAACCAGAGTGGTTGCAAGGTACTTGCATATAGAATTCACAAATTGTAAAAATCGAGGAGAGGAGGAAGTGAACTTGTTGCAGGTTTCAGAAGGAAAAACCAAGAAAGAAAGTGCAAGGTTGTTCTATGAGACACTGGTGTTGAGAACTAATGGGTATGTGGATGTGAAGCAAGATGAAGCCTATGGTGACATTCTACTCCGTAAGCTCCACAAATGGGATCAAACATGGGAAGACGATATGGTCAACAGAGACAGCTTCGAACCTATGGATTCATGTGCATAG

Protein Analysis

1476

Amino Acids

167.07

Weight (kDa)

4.75

Isoelectric Point (pI)

52.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rad21_Rec8_N PF04825 1 - 94 1.5e-25 N terminus of Rad21 / Rec8 like protein
Rad21_Rec8 PF04824 672 - 715 1.3e-13 Conserved region of Rad21 / Rec8 like protein
Rad21_Rec8_N PF04825 766 - 821 1.6e-10 N terminus of Rad21 / Rec8 like protein
Rad21_Rec8 PF04824 1403 - 1450 6e-17 Conserved region of Rad21 / Rec8 like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 301, 3244
AasI GACNNNNNNGTC 1 cut(s) 4388
AatII GACGTC 1 cut(s) 2756
Acc36I ACCTGC 4 cut(s) 301, 1627, 3244, 4219
AccB1I GGYRCC 3 cut(s) 44, 491, 2663
AccB7I CCANNNNNTGG 1 cut(s) 3782
AccI GTMKAC 2 cut(s) 6, 3787
AccIII TCCGGA 1 cut(s) 3980
AciI CCGC 3 cut(s) 117, 311, 2849
AclI AACGTT 1 cut(s) 1476
AclWI GGATC 7 cut(s) 876, 1157, 1163, 1767, 2117, 2172, 4374
AcoI YGGCCR 1 cut(s) 114
AcuI CTGAAG 4 cut(s) 792, 1764, 2571, 2886
AcvI CACGTG 1 cut(s) 2014
AcyI GRCGYC 4 cut(s) 45, 153, 401, 2753
AfiI CCNNNNNNNGG 7 cut(s) 184, 776, 1808, 3782, 4007, 4129, 4363
AhdI GACNNNNNGTC 1 cut(s) 2914
AjnI CCWGG 7 cut(s) 1020, 2698, 3075, 3620, 3811, 3847, 3883
Alw26I GTCTC 9 cut(s) 95, 408, 1769, 2012, 2069, 2220, 2460, 4271, 4392
AlwI GGATC 7 cut(s) 876, 1157, 1163, 1767, 2117, 2172, 4374
AlwNI CAGNNNCTG 2 cut(s) 104, 770
Ama87I CYCGRG 1 cut(s) 205
Aor13HI TCCGGA 1 cut(s) 3980
AoxI GGCC 4 cut(s) 35, 114, 1044, 3815
ApeKI GCWGC 7 cut(s) 59, 619, 1210, 1327, 3470, 3532, 3617
ArsI GACNNNNNNTTYG 2 cut(s) 94, 126
Asp700I GAANNNNTTC 3 cut(s) 2901, 3400, 3920
AspLEI GCGC 2 cut(s) 47, 2488
AspS9I GGNCC 5 cut(s) 35, 1024, 1044, 1494, 3815
AsuC2I CCSGG 1 cut(s) 3652
AsuII TTCGAA 3 cut(s) 196, 2371, 4407
AvaI CYCGRG 1 cut(s) 205
AvaII GGWCC 2 cut(s) 1024, 1494
AxyI CCTNAGG 1 cut(s) 2912
BanI GGYRCC 3 cut(s) 44, 491, 2663
BanII GRGCYC 2 cut(s) 2970, 3941
BbrPI CACGTG 1 cut(s) 2014
BbsI GAAGAC 5 cut(s) 92, 806, 1632, 3186, 4386
BbvI GCAGC 7 cut(s) 46, 631, 1222, 1314, 3457, 3519, 3604
BceAI ACGGC 1 cut(s) 2655
BcgI CGANNNNNNTGC 2 cut(s) 1960, 1994
BciT130I CCWGG 7 cut(s) 1022, 2700, 3077, 3622, 3813, 3849, 3885
BciVI GTATCC 1 cut(s) 2587
BclI TGATCA 1 cut(s) 475
BcnI CCSGG 1 cut(s) 3652
BcoDI GTCTC 9 cut(s) 95, 408, 1769, 2012, 2069, 2220, 2460, 4271, 4392
BfmI CTRYAG 3 cut(s) 294, 1620, 3036
BfoI RGCGCY 1 cut(s) 48
BfuAI ACCTGC 4 cut(s) 301, 1627, 3244, 4219
BfuI GTATCC 1 cut(s) 2587
BglII AGATCT 1 cut(s) 816
BisI GCNGC 9 cut(s) 60, 117, 312, 620, 1211, 1328, 3471, 3533, 3618
BlpI GCTNAGC 1 cut(s) 3972
BlsI GCNGC 9 cut(s) 61, 118, 313, 621, 1212, 1329, 3472, 3534, 3619
BmcAI AGTACT 2 cut(s) 168, 3781
Bme1390I CCNGG 8 cut(s) 1022, 2700, 3077, 3622, 3652, 3813, 3849, 3885
Bme18I GGWCC 2 cut(s) 1024, 1494
BmeRI GACNNNNNGTC 1 cut(s) 2914
BmeT110I CYCGRG 1 cut(s) 205
BmgT120I GGNCC 5 cut(s) 35, 1024, 1044, 1494, 3815
BmrFI CCNGG 8 cut(s) 1022, 2700, 3077, 3622, 3652, 3813, 3849, 3885
BmrI ACTGGG 2 cut(s) 521, 2242
BmsI GCATC 6 cut(s) 343, 1207, 1351, 2227, 2518, 3556
BmuI ACTGGG 2 cut(s) 521, 2242
BpiI GAAGAC 5 cut(s) 92, 806, 1632, 3186, 4386
BpmI CTGGAG 3 cut(s) 738, 1521, 3732
Bpu10I CCTNAGC 1 cut(s) 1490
Bpu1102I GCTNAGC 1 cut(s) 3972
Bpu14I TTCGAA 3 cut(s) 196, 2371, 4407
BpuEI CTTGAG 9 cut(s) 65, 627, 993, 1041, 2781, 2799, 3225, 3848, 3884
BpuMI CCSGG 1 cut(s) 3652
BsaAI YACGTR 1 cut(s) 2014
BsaBI GATNNNNATC 2 cut(s) 1167, 1758
BsaHI GRCGYC 4 cut(s) 45, 153, 401, 2753
BsaJI CCNNGG 4 cut(s) 1020, 1733, 2671, 3812
BsaWI WCCGGW 4 cut(s) 334, 2509, 3166, 3980
BsaXI ACNNNNNCTCC 4 cut(s) 2556, 2586, 3683, 3713
Bsc4I CCNNNNNNNGG 7 cut(s) 184, 776, 1808, 3782, 4007, 4129, 4363
Bse1I ACTGG 9 cut(s) 527, 865, 1262, 2085, 2237, 3043, 3787, 4134, 4287
Bse21I CCTNAGG 1 cut(s) 2912
Bse3DI GCAATG 1 cut(s) 244
Bse8I GATNNNNATC 2 cut(s) 1167, 1758
BseAI TCCGGA 1 cut(s) 3980
BseBI CCWGG 7 cut(s) 1022, 2700, 3077, 3622, 3813, 3849, 3885
BseDI CCNNGG 4 cut(s) 1020, 1733, 2671, 3812
BseJI GATNNNNATC 2 cut(s) 1167, 1758
BseLI CCNNNNNNNGG 7 cut(s) 184, 776, 1808, 3782, 4007, 4129, 4363
BseMI GCAATG 1 cut(s) 244
BseMII CTCAG 7 cut(s) 804, 818, 1508, 1764, 2649, 2910, 3963
BseNI ACTGG 9 cut(s) 527, 865, 1262, 2085, 2237, 3043, 3787, 4134, 4287
BseRI GAGGAG 5 cut(s) 902, 3146, 3704, 4218, 4223
BseXI GCAGC 7 cut(s) 46, 631, 1222, 1314, 3457, 3519, 3604
BsgI GTGCAG 1 cut(s) 453
BshFI GGCC 4 cut(s) 37, 116, 1046, 3817
BshNI GGYRCC 3 cut(s) 44, 491, 2663
BsiHKCI CYCGRG 1 cut(s) 205
BsiSI CCGG 5 cut(s) 335, 2510, 3167, 3652, 3981
BslFI GGGAC 2 cut(s) 1480, 2887
BslI CCNNNNNNNGG 7 cut(s) 184, 776, 1808, 3782, 4007, 4129, 4363
BsmAI GTCTC 9 cut(s) 95, 408, 1769, 2012, 2069, 2220, 2460, 4271, 4392
BsmBI CGTCTC 1 cut(s) 408
BsmFI GGGAC 2 cut(s) 1480, 2887
BsnI GGCC 4 cut(s) 37, 116, 1046, 3817
BsoBI CYCGRG 1 cut(s) 205
Bsp119I TTCGAA 3 cut(s) 196, 2371, 4407
Bsp1286I GDGCHC 2 cut(s) 2970, 3941
Bsp13I TCCGGA 1 cut(s) 3980
Bsp1407I TGTACA 2 cut(s) 1597, 3230
Bsp1720I GCTNAGC 1 cut(s) 3972
BspACI CCGC 3 cut(s) 117, 311, 2849
BspANI GGCC 4 cut(s) 37, 116, 1046, 3817
BspCNI CTCAG 7 cut(s) 805, 817, 1509, 1765, 2648, 2911, 3964
BspEI TCCGGA 1 cut(s) 3980
BspHI TCATGA 1 cut(s) 3001
BspMAI CTGCAG 2 cut(s) 298, 1624
BspMI ACCTGC 4 cut(s) 301, 1627, 3244, 4219
BspPI GGATC 7 cut(s) 876, 1157, 1163, 1767, 2117, 2172, 4374
BspQI GCTCTTC 6 cut(s) 942, 1095, 1869, 2958, 3710, 3990
BspT104I TTCGAA 3 cut(s) 196, 2371, 4407
BspT107I GGYRCC 3 cut(s) 44, 491, 2663
BsrDI GCAATG 1 cut(s) 244
BsrGI TGTACA 2 cut(s) 1597, 3230
BsrI ACTGG 9 cut(s) 527, 865, 1262, 2085, 2237, 3043, 3787, 4134, 4287
BssECI CCNNGG 4 cut(s) 1020, 1733, 2671, 3812
BssNI GRCGYC 4 cut(s) 45, 153, 401, 2753
BssT1I CCWWGG 1 cut(s) 1733
Bst2UI CCWGG 7 cut(s) 1022, 2700, 3077, 3622, 3813, 3849, 3885
Bst4CI ACNGT 8 cut(s) 68, 503, 1562, 1657, 1803, 2006, 3544, 3739
BstACI GRCGYC 4 cut(s) 45, 153, 401, 2753
BstAPI GCANNNNNTGC 1 cut(s) 1679
BstAUI TGTACA 2 cut(s) 1597, 3230
BstBAI YACGTR 1 cut(s) 2014
BstBI TTCGAA 3 cut(s) 196, 2371, 4407
BstC8I GCNNGC 4 cut(s) 496, 2118, 2668, 3073
BstDSI CCRYGG 1 cut(s) 2671
BstH2I RGCGCY 1 cut(s) 48
BstHHI GCGC 2 cut(s) 47, 2488
BstMAI GTCTC 9 cut(s) 95, 408, 1769, 2012, 2069, 2220, 2460, 4271, 4392
BstMWI GCNNNNNNNGC 5 cut(s) 628, 1679, 2855, 2899, 3617
BstNI CCWGG 7 cut(s) 1022, 2700, 3077, 3622, 3813, 3849, 3885
BstSCI CCNGG 8 cut(s) 1020, 2698, 3075, 3620, 3650, 3811, 3847, 3883
BstSFI CTRYAG 3 cut(s) 294, 1620, 3036
BstV1I GCAGC 7 cut(s) 46, 631, 1222, 1314, 3457, 3519, 3604
BstV2I GAAGAC 5 cut(s) 92, 806, 1632, 3186, 4386
BstX2I RGATCY 4 cut(s) 816, 1162, 1168, 1759
BstXI CCANNNNNNTGG 1 cut(s) 1966
BstYI RGATCY 4 cut(s) 816, 1162, 1168, 1759
Bsu36I CCTNAGG 1 cut(s) 2912
BsuI GTATCC 1 cut(s) 2587
BsuRI GGCC 4 cut(s) 37, 116, 1046, 3817
BtgI CCRYGG 1 cut(s) 2671
BtgZI GCGATG 1 cut(s) 2314
BtsI GCAGTG 1 cut(s) 771
BtsIMutI CAGTG 6 cut(s) 391, 771, 1956, 2078, 2566, 4280
BveI ACCTGC 4 cut(s) 301, 1627, 3244, 4219
Cac8I GCNNGC 4 cut(s) 496, 2118, 2668, 3073
CaiI CAGNNNCTG 2 cut(s) 104, 770
CciI TCATGA 1 cut(s) 3001
CfoI GCGC 2 cut(s) 47, 2488
Cfr13I GGNCC 5 cut(s) 35, 1024, 1044, 1494, 3815
CseI GACGC 2 cut(s) 142, 390
DinI GGCGCC 1 cut(s) 46
DraI TTTAAA 1 cut(s) 135
DrdI GACNNNNNNGTC 1 cut(s) 4388
DriI GACNNNNNGTC 1 cut(s) 2914
DseDI GACNNNNNNGTC 1 cut(s) 4388
EaeI YGGCCR 1 cut(s) 114
Eam1105I GACNNNNNGTC 1 cut(s) 2914
Eco130I CCWWGG 1 cut(s) 1733
Eco24I GRGCYC 2 cut(s) 2970, 3941
Eco32I GATATC 1 cut(s) 1470
Eco47I GGWCC 2 cut(s) 1024, 1494
Eco57I CTGAAG 4 cut(s) 792, 1764, 2571, 2886
Eco72I CACGTG 1 cut(s) 2014
Eco81I CCTNAGG 1 cut(s) 2912
Eco88I CYCGRG 1 cut(s) 205
EcoO109I RGGNCCY 2 cut(s) 35, 1494
EcoRI GAATTC 3 cut(s) 780, 3057, 4181
EcoRII CCWGG 7 cut(s) 1020, 2698, 3075, 3620, 3811, 3847, 3883
EcoRV GATATC 1 cut(s) 1470
EcoT14I CCWWGG 1 cut(s) 1733
EcoT22I ATGCAT 2 cut(s) 2242, 2533
EcoT38I GRGCYC 2 cut(s) 2970, 3941
EgeI GGCGCC 1 cut(s) 46
EheI GGCGCC 1 cut(s) 46
ErhI CCWWGG 1 cut(s) 1733
Esp3I CGTCTC 1 cut(s) 408
FalI AAGNNNNNCTT 2 cut(s) 22, 54
FaqI GGGAC 2 cut(s) 1480, 2887
FauNDI CATATG 3 cut(s) 50, 1075, 3307
FbaI TGATCA 1 cut(s) 475
FblI GTMKAC 2 cut(s) 6, 3787
Fnu4HI GCNGC 9 cut(s) 60, 117, 312, 620, 1211, 1328, 3471, 3533, 3618
FriOI GRGCYC 2 cut(s) 2970, 3941
Fsp4HI GCNGC 9 cut(s) 60, 117, 312, 620, 1211, 1328, 3471, 3533, 3618
GlaI GCGC 2 cut(s) 46, 2487
GluI GCNGC 9 cut(s) 60, 117, 312, 620, 1211, 1328, 3471, 3533, 3618
GsuI CTGGAG 3 cut(s) 738, 1521, 3732
HaeII RGCGCY 1 cut(s) 48
HaeIII GGCC 4 cut(s) 37, 116, 1046, 3817
HapII CCGG 5 cut(s) 335, 2510, 3167, 3652, 3981
HgaI GACGC 2 cut(s) 142, 390
HhaI GCGC 2 cut(s) 47, 2488
Hin1I GRCGYC 4 cut(s) 45, 153, 401, 2753
Hin6I GCGC 2 cut(s) 45, 2486
HinP1I GCGC 2 cut(s) 45, 2486
HincII GTYRAC 2 cut(s) 4120, 4393
HindII GTYRAC 2 cut(s) 4120, 4393
HindIII AAGCTT 2 cut(s) 2900, 4020
HpaI GTTAAC 1 cut(s) 4120
HpaII CCGG 5 cut(s) 335, 2510, 3167, 3652, 3981
Hpy99I CGWCG 2 cut(s) 158, 2758
HpyCH4III ACNGT 8 cut(s) 68, 503, 1562, 1657, 1803, 2006, 3544, 3739
HpyCH4IV ACGT 3 cut(s) 1476, 2013, 2753
HpyF10VI GCNNNNNNNGC 5 cut(s) 628, 1679, 2855, 2899, 3617
HpySE526I ACGT 3 cut(s) 1476, 2013, 2753
Hsp92I GRCGYC 4 cut(s) 45, 153, 401, 2753
HspAI GCGC 2 cut(s) 45, 2486
KasI GGCGCC 1 cut(s) 44
Kpn2I TCCGGA 1 cut(s) 3980
Ksp22I TGATCA 1 cut(s) 475
KspAI GTTAAC 1 cut(s) 4120
LguI GCTCTTC 6 cut(s) 942, 1095, 1869, 2958, 3710, 3990
LmnI GCTCC 9 cut(s) 369, 593, 1459, 1811, 2765, 3016, 3034, 3952, 4359
Lsp1109I GCAGC 7 cut(s) 46, 631, 1222, 1314, 3457, 3519, 3604
LweI GCATC 6 cut(s) 343, 1207, 1351, 2227, 2518, 3556
MaeII ACGT 3 cut(s) 1476, 2013, 2753
MflI RGATCY 4 cut(s) 816, 1162, 1168, 1759
MhlI GDGCHC 2 cut(s) 2970, 3941
Mly113I GGCGCC 1 cut(s) 45
MlyI GAGTC 6 cut(s) 745, 796, 1747, 2205, 2489, 2869
MmeI TCCRAC 3 cut(s) 1536, 1639, 2004
Mph1103I ATGCAT 2 cut(s) 2242, 2533
MroI TCCGGA 1 cut(s) 3980
MroXI GAANNNNTTC 3 cut(s) 2901, 3400, 3920
MslI CAYNNNNRTG 3 cut(s) 876, 1095, 3327
MspI CCGG 5 cut(s) 335, 2510, 3167, 3652, 3981
MspR9I CCNGG 8 cut(s) 1022, 2700, 3077, 3622, 3652, 3813, 3849, 3885
MvaI CCWGG 7 cut(s) 1022, 2700, 3077, 3622, 3813, 3849, 3885
MwoI GCNNNNNNNGC 5 cut(s) 628, 1679, 2855, 2899, 3617
NarI GGCGCC 1 cut(s) 45
NciI CCSGG 1 cut(s) 3652
NdeI CATATG 3 cut(s) 50, 1075, 3307
NmuCI GTSAC 4 cut(s) 2197, 3272, 3572, 4334
NsiI ATGCAT 2 cut(s) 2242, 2533
NspV TTCGAA 3 cut(s) 196, 2371, 4407
PaeR7I CTCGAG 1 cut(s) 205
PagI TCATGA 1 cut(s) 3001
PaqCI CACCTGC 2 cut(s) 301, 3244
PciSI GCTCTTC 6 cut(s) 942, 1095, 1869, 2958, 3710, 3990
PdmI GAANNNNTTC 3 cut(s) 2901, 3400, 3920
PfeI GAWTC 8 cut(s) 1016, 1087, 2246, 2791, 3319, 3401, 3725, 4418
PflMI CCANNNNNTGG 1 cut(s) 3782
PfoI TCCNGGA 1 cut(s) 3650
PkrI GCNGC 9 cut(s) 61, 118, 313, 621, 1212, 1329, 3472, 3534, 3619
PleI GAGTC 6 cut(s) 745, 796, 1746, 2204, 2489, 2869
PluTI GGCGCC 1 cut(s) 48
PmaCI CACGTG 1 cut(s) 2014
PmlI CACGTG 1 cut(s) 2014
PpsI GAGTC 6 cut(s) 745, 796, 1746, 2204, 2489, 2869
Ppu21I YACGTR 1 cut(s) 2014
PpuMI RGGWCCY 1 cut(s) 1494
Psp1406I AACGTT 1 cut(s) 1476
Psp5II RGGWCCY 1 cut(s) 1494
Psp6I CCWGG 7 cut(s) 1020, 2698, 3075, 3620, 3811, 3847, 3883
PspCI CACGTG 1 cut(s) 2014
PspGI CCWGG 7 cut(s) 1020, 2698, 3075, 3620, 3811, 3847, 3883
PspPI GGNCC 5 cut(s) 35, 1024, 1044, 1494, 3815
PspPPI RGGWCCY 1 cut(s) 1494
PsrI GAACNNNNNNTAC 2 cut(s) 3657, 3689
PstI CTGCAG 2 cut(s) 298, 1624
PstNI CAGNNNCTG 2 cut(s) 104, 770
PsuI RGATCY 4 cut(s) 816, 1162, 1168, 1759
RseI CAYNNNNRTG 3 cut(s) 876, 1095, 3327
SapI GCTCTTC 6 cut(s) 942, 1095, 1869, 2958, 3710, 3990
SatI GCNGC 9 cut(s) 60, 117, 312, 620, 1211, 1328, 3471, 3533, 3618
Sau96I GGNCC 5 cut(s) 35, 1024, 1044, 1494, 3815
ScaI AGTACT 2 cut(s) 168, 3781
SchI GAGTC 6 cut(s) 745, 796, 1747, 2205, 2489, 2869
ScrFI CCNGG 8 cut(s) 1022, 2700, 3077, 3622, 3652, 3813, 3849, 3885
SduI GDGCHC 2 cut(s) 2970, 3941
SfaNI GCATC 6 cut(s) 343, 1207, 1351, 2227, 2518, 3556
SfcI CTRYAG 3 cut(s) 294, 1620, 3036
SfoI GGCGCC 1 cut(s) 46
Sfr274I CTCGAG 1 cut(s) 205
SfuI TTCGAA 3 cut(s) 196, 2371, 4407
SinI GGWCC 2 cut(s) 1024, 1494
SlaI CTCGAG 1 cut(s) 205
SmiMI CAYNNNNRTG 3 cut(s) 876, 1095, 3327
SsiI CCGC 3 cut(s) 117, 311, 2849
SspDI GGCGCC 1 cut(s) 44
SspI AATATT 1 cut(s) 1150
StyD4I CCNGG 8 cut(s) 1020, 2698, 3075, 3620, 3650, 3811, 3847, 3883
StyI CCWWGG 1 cut(s) 1733
TaaI ACNGT 8 cut(s) 68, 503, 1562, 1657, 1803, 2006, 3544, 3739
TaiI ACGT 3 cut(s) 1479, 2016, 2756
TaqI TCGA 7 cut(s) 196, 206, 584, 2371, 2756, 4201, 4407
TatI WGTACW 7 cut(s) 166, 538, 1597, 1652, 2710, 3230, 3779
TauI GCSGC 2 cut(s) 119, 314
TfiI GAWTC 8 cut(s) 1016, 1087, 2246, 2791, 3319, 3401, 3725, 4418
TscAI CASTG 6 cut(s) 391, 771, 1956, 2085, 2566, 4287
TseFI GTSAC 4 cut(s) 2197, 3272, 3572, 4334
TseI GCWGC 7 cut(s) 59, 619, 1210, 1327, 3470, 3532, 3617
Tsp45I GTSAC 4 cut(s) 2197, 3272, 3572, 4334
TspGWI ACGGA 1 cut(s) 4337
TspRI CASTG 6 cut(s) 391, 771, 1956, 2085, 2566, 4287
Van91I CCANNNNNTGG 1 cut(s) 3782
VpaK11BI GGWCC 2 cut(s) 1024, 1494
XbaI TCTAGA 2 cut(s) 1861, 2270
XcmI CCANNNNNNNNNTGG 2 cut(s) 857, 3050
XhoI CTCGAG 1 cut(s) 205
XmiI GTMKAC 2 cut(s) 6, 3787
XmnI GAANNNNTTC 3 cut(s) 2901, 3400, 3920
ZraI GACGTC 1 cut(s) 2754
ZrmI AGTACT 2 cut(s) 168, 3781
Zsp2I ATGCAT 2 cut(s) 2242, 2533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.