Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000681

Physical Location & Seq

Genomic Coordinates Reverse (-)

81845140 .. 81848683

Gene Structure 3544 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G054150.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGTTTTACTCACAGTGTCTCTTATCAAGAAAAGGGCGTTTAGGCTCCATATGGGTTGCTGCCTATTGTTTCAAAAAGCTCAAGAAGGCCCAGGTCGCTGAAACTGACATTTCAGCCTCTGTTGATAAAATTTTGAAGGATGATTGGGATGTCATCGCATATAGGGTACTAGCCTACCTTCTTCTTGGTGTTGTTCGAATATACTCAAAAAAAGTTGAATACCTTTTTGATGACTGCCACGAAGTGCTAACTGAAATCAACAAGTTTGTTGTTAGCACAAAAGAGAAGGGAGACACAGATACATTTTGTGCGCCTTATGACTCTGTTACCCTACCAGAGAGGTTTGAACTTGATGCATTTGATTTGGGCCTCCCTGAAGATGTCAGTGGAGGAAATGAAGTATCCTACGAAGCTATCACACTTAAAGATTGTCCAAAGGGAAATGTAGGACAATTTTCATCAGATATGTATGATTACGAGGAATTTGGTGCCTGCCGTGGTATCTTTTCTGCCAATTACATTCCACGCAGAGATGTACTTTCATTTGACGGGATGGAATTGGATATGGAGTTAAGGACGTCAAGGAATGGAGCTAACCCAGAAGTAAACATGGAGAATCCTCAAGAGAGTAGGTTCTCTCAAGTAGAAACTAATGGAGAACAGATAAAGGTTCCGGATATAGCATTGTCTGAAGATGGGACTCTAGGAGAAGCAAGGCAGGAAAAGCTTCCAGACCTTAGGTCTGAGGAAAAAGGTCTGAACCATGAAATATTTTTTGGCATTGAAGAAGAGCCCCTAAACCAAGTTGAACCATTTGGTGAAGATCACGAAACTAATGGGGAGCAAATAAAGGCTCCTGCTGTAGTCCAGTCTGTTGATGGAATTCAAGAGGCAAGCCTGGAACCTTCCTGTCATGTTACATCATCTGGTGAAGATCACCACATTATTCGAGAGGAGATTATCATGCAATCAGAAAATCAAATGTGTCCAGTTACAAGAGAAGACCACAATCTAAGCAACTTGGAAGCTGACAGGGGAAACCTGAAAAGTTGTACACCTGCTCAAGAAGAGAACATGGACCTTGATAAGTCTTGTGACTTAAAGAAACCTGAAAAACCTGTTTGTTCATATGGGGAAGAGAATCATAAGGATGGAGAGCCAACAAAGTTACAGGACACGATTCCACCAGATAATGTGAATTGTCAAATTACTGCTGGAAAAGATTCAGAGGCTTTAGTTGTTACTACACCAAAGTTAAGGAGGGTTATTCCCACACCAGCTATGAGGAAGGCTGCTCAAATCTCTAGGAAAAGGAAAAGGAAATGTACCTTTGATGAAATGGTAGTGCTGCCTAATACGGTAATCAAGCAAAGCATAAATGATGCGAGTGACTTGGTTTCAAAAAGAAGAAAGGTTCCTGAAACTGCCCTTGCTGCCTGGAAAACCTGTCAGCTTAGAAACCTATCCCGGAATTTCTTGGAACCATTGATACCTAGTGTTTCAGAGGAGCTTAGGTCGCTCTTCCACAAAAGCATAATAGAATCTGCTGAAACTGTTGAACCTCCAGAAAAGCTAGATGTGTTAGAACCTCCAAGTACTGGTAGACCAGAGCAAGTAGAAACTTCACCAGGGCCACCTGTCCTTGAGCAAATAGAAATTGAGCCTGGAACCCCTATCCTTGAGAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000278 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0008150 GO:0008152 GO:0008278 GO:0009987 GO:0016043 GO:0022402 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

562

Amino Acids

63.01

Weight (kDa)

4.77

Isoelectric Point (pI)

54.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad21_Rec8_N	PF04825	1 - 96	1.2e-26	N terminus of Rad21 / Rec8 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0000681)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40840 AT5G40840 AT5G40840 AT5G40840 AT5G40840 AT5G40840
fragaria_vesca	FvH4_6g53040 FvH4_6g53040 FvH4_6g53050 FvH4_6g53050
malus_domestica	MD09G1015100.v1.1 MD09G1015200.v1.1 MD17G1015200.v1.1
prunus_persica	Prupe.3G302600_v2.0.a1 Prupe.3G302600_v2.0.a1 Prupe.3G302600_v2.0.a1
pyrus_communis	pycom111g01230 pycom17g01230 pycom17g01240
rosa_chinensis	RchiOBHm_Chr2g0146031 RchiOBHm_Chr2g0172041 RchiOBHm_Chr2g0172061 RchiOBHm_Chr2g0172121 RchiOBHm_Chr2g0172131 RchiOBHm_Chr2g0172161 RchiOBHm_Chr2g0173841 RchiOBHm_Chr2g0174821 RchiOBHm_Chr2g0174831
rosa_laevigata	RLG00000022078 RLG00000022079 RLG00000022228 RLG00000022298 RLG00000022299 RLG00000032768
rosa_multiflora	Rmu_co8137076.1_g000001 Rmu_sc0001716.1_g000038 Rmu_sc0003188.1_g000021 Rmu_sc0015734.1_g000001 Rmu_sc0038259.1_g000001 Rmu_sc0038259.1_g000002 Rmu_sc0040737.1_g000001 Rmu_sc0041600.1_g000001 Rmu_ssc0000252.1_g000045
rosa_roxburghii	Rroxscaffold_2G00077660 Rroxscaffold_2G00080120 Rroxscaffold_2G00080130 Rroxscaffold_2G00080290
rosa_rugosa	Rorug02G0579500 Rorug02G0579600
rosa_samantha	Rh2AG632100 Rh2AG632200 Rh2AG656700 Rh2AG656800 Rh2AG660800 Rh2AG660900 Rh2BG645600 Rh2BG645700 Rh2BG667700 Rh2BG667800 Rh2BG672200 Rh2BG672300 Rh2CG627800 Rh2CG627900 Rh2CG635000 Rh2CG635100 Rh2DG658600 Rh2DG678300 Rh2DG685300 Rh2DG685400 Rh6AG066100 Rh6BG058900
rosa_wichuraiana	Rw2G053570 Rw2G054150 Rw2G054160 Rw6G005810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1066
AatII	GACGTC	1 cut(s)	581
Acc36I	ACCTGC	1 cut(s)	1066
AccB1I	GGYRCC	1 cut(s)	488
AccB7I	CCANNNNNTGG	1 cut(s)	1598
AccI	GTMKAC	1 cut(s)	1603
AccIII	TCCGGA	1 cut(s)	673
AcsI	RAATTY	4 cut(s)	129, 482, 882, 1471
AcuI	CTGAAG	2 cut(s)	396, 711
AcyI	GRCGYC	1 cut(s)	578
AdeI	CACNNNGTG	1 cut(s)	244
AfaI	GTAC	5 cut(s)	168, 537, 1054, 1327, 1597
AfiI	CCNNNNNNNGG	1 cut(s)	1598
AgsI	TTSAA	9 cut(s)	73, 136, 218, 347, 785, 809, 887, 1401, 1559
AhdI	GACNNNNNGTC	1 cut(s)	739
AjnI	CCWGG	5 cut(s)	90, 897, 1436, 1627, 1663
AjuI	GAANNNNNNNTTGG	2 cut(s)	759, 791
AluBI	AGCT	9 cut(s)	79, 413, 593, 727, 1028, 1280, 1453, 1510, 1573
AluI	AGCT	9 cut(s)	79, 413, 593, 727, 1028, 1280, 1453, 1510, 1573
Alw26I	GTCTC	2 cut(s)	23, 285
AlwNI	CAGNNNCTG	1 cut(s)	119
Aor13HI	TCCGGA	1 cut(s)	673
AoxI	GGCC	3 cut(s)	87, 367, 1631
ApeKI	GCWGC	4 cut(s)	59, 1292, 1348, 1433
ApoI	RAATTY	4 cut(s)	129, 482, 882, 1471
Asp700I	GAANNNNTTC	2 cut(s)	726, 1222
AspLEI	GCGC	1 cut(s)	313
AspS9I	GGNCC	4 cut(s)	88, 367, 1078, 1631
AsuC2I	CCSGG	1 cut(s)	1468
AsuHPI	GGTGA	4 cut(s)	830, 929, 941, 1617
AsuII	TTCGAA	1 cut(s)	196
AvaII	GGWCC	1 cut(s)	1078
AxyI	CCTNAGG	1 cut(s)	737
BanI	GGYRCC	1 cut(s)	488
BanII	GRGCYC	1 cut(s)	795
BbsI	GAAGAC	1 cut(s)	1008
BbvI	GCAGC	4 cut(s)	46, 1279, 1335, 1420
BccI	CCATC	4 cut(s)	547, 689, 872, 1145
BceAI	ACGGC	1 cut(s)	480
BciT130I	CCWGG	5 cut(s)	92, 899, 1438, 1629, 1665
BciVI	GTATCC	1 cut(s)	412
BcnI	CCSGG	1 cut(s)	1468
BcoDI	GTCTC	2 cut(s)	23, 285
BfaI	CTAG	5 cut(s)	170, 704, 1305, 1494, 1574
BfmI	CTRYAG	1 cut(s)	861
BfuAI	ACCTGC	1 cut(s)	1066
BfuI	GTATCC	1 cut(s)	412
BisI	GCNGC	4 cut(s)	60, 1293, 1349, 1434
BlsI	GCNGC	4 cut(s)	61, 1294, 1350, 1435
BmcAI	AGTACT	1 cut(s)	1597
Bme1390I	CCNGG	6 cut(s)	92, 899, 1438, 1468, 1629, 1665
Bme18I	GGWCC	1 cut(s)	1078
BmeRI	GACNNNNNGTC	1 cut(s)	739
BmgT120I	GGNCC	4 cut(s)	88, 367, 1078, 1631
BmiI	GGNNCC	8 cut(s)	46, 490, 672, 855, 903, 1416, 1482, 1669
BmrFI	CCNGG	6 cut(s)	92, 899, 1438, 1468, 1629, 1665
BmsI	GCATC	2 cut(s)	343, 1372
BpiI	GAAGAC	1 cut(s)	1008
BpmI	CTGGAG	1 cut(s)	1548
Bpu10I	CCTNAGC	1 cut(s)	1511
Bpu14I	TTCGAA	1 cut(s)	196
BpuEI	CTTGAG	5 cut(s)	65, 606, 624, 1047, 1664
BpuMI	CCSGG	1 cut(s)	1468
BsaHI	GRCGYC	1 cut(s)	578
BsaJI	CCNNGG	3 cut(s)	90, 496, 1628
BsaWI	WCCGGW	1 cut(s)	673
BsaXI	ACNNNNNCTCC	2 cut(s)	1499, 1529
Bsc4I	CCNNNNNNNGG	1 cut(s)	1598
Bse1I	ACTGG	3 cut(s)	868, 989, 1603
Bse21I	CCTNAGG	1 cut(s)	737
BseAI	TCCGGA	1 cut(s)	673
BseBI	CCWGG	5 cut(s)	92, 899, 1438, 1629, 1665
BseDI	CCNNGG	3 cut(s)	90, 496, 1628
BseGI	GGATG	4 cut(s)	145, 154, 558, 1156
BseLI	CCNNNNNNNGG	1 cut(s)	1598
BseMII	CTCAG	1 cut(s)	735
BseNI	ACTGG	3 cut(s)	868, 989, 1603
BseRI	GAGGAG	2 cut(s)	968, 1520
BseXI	GCAGC	4 cut(s)	46, 1279, 1335, 1420
BshFI	GGCC	3 cut(s)	89, 369, 1633
BshNI	GGYRCC	1 cut(s)	488
BsiSI	CCGG	2 cut(s)	674, 1468
BslFI	GGGAC	1 cut(s)	712
BslI	CCNNNNNNNGG	1 cut(s)	1598
BsmAI	GTCTC	2 cut(s)	23, 285
BsmFI	GGGAC	1 cut(s)	712
BsnI	GGCC	3 cut(s)	89, 369, 1633
Bsp119I	TTCGAA	1 cut(s)	196
Bsp1286I	GDGCHC	1 cut(s)	795
Bsp13I	TCCGGA	1 cut(s)	673
Bsp1407I	TGTACA	1 cut(s)	1052
Bsp143I	GATC	2 cut(s)	823, 934
BspANI	GGCC	3 cut(s)	89, 369, 1633
BspCNI	CTCAG	1 cut(s)	736
BspEI	TCCGGA	1 cut(s)	673
BspLI	GGNNCC	8 cut(s)	46, 490, 672, 855, 903, 1416, 1482, 1669
BspMI	ACCTGC	1 cut(s)	1066
BspQI	GCTCTTC	2 cut(s)	783, 1526
BspT104I	TTCGAA	1 cut(s)	196
BspT107I	GGYRCC	1 cut(s)	488
BsrGI	TGTACA	1 cut(s)	1052
BsrI	ACTGG	3 cut(s)	868, 989, 1603
BssECI	CCNNGG	3 cut(s)	90, 496, 1628
BssMI	GATC	2 cut(s)	823, 934
BssNI	GRCGYC	1 cut(s)	578
Bst2UI	CCWGG	5 cut(s)	92, 899, 1438, 1629, 1665
Bst4CI	ACNGT	3 cut(s)	15, 1360, 1555
Bst6I	CTCTTC	4 cut(s)	783, 1062, 1131, 1526
BstACI	GRCGYC	1 cut(s)	578
BstAUI	TGTACA	1 cut(s)	1052
BstBI	TTCGAA	1 cut(s)	196
BstC8I	GCNNGC	2 cut(s)	493, 895
BstDEI	CTNAG	5 cut(s)	737, 744, 1013, 1454, 1511
BstDSI	CCRYGG	1 cut(s)	496
BstF5I	GGATG	4 cut(s)	145, 154, 558, 1156
BstHHI	GCGC	1 cut(s)	313
BstKTI	GATC	2 cut(s)	826, 937
BstMAI	GTCTC	2 cut(s)	23, 285
BstMBI	GATC	2 cut(s)	823, 934
BstMWI	GCNNNNNNNGC	4 cut(s)	95, 724, 1433, 1516
BstNI	CCWGG	5 cut(s)	92, 899, 1438, 1629, 1665
BstSCI	CCNGG	6 cut(s)	90, 897, 1436, 1466, 1627, 1663
BstSFI	CTRYAG	1 cut(s)	861
BstV1I	GCAGC	4 cut(s)	46, 1279, 1335, 1420
BstV2I	GAAGAC	1 cut(s)	1008
Bsu36I	CCTNAGG	1 cut(s)	737
BsuI	GTATCC	1 cut(s)	412
BsuRI	GGCC	3 cut(s)	89, 369, 1633
BtgI	CCRYGG	1 cut(s)	496
BtgZI	GCGATG	1 cut(s)	139
BtsCI	GGATG	4 cut(s)	145, 154, 558, 1156
BtsIMutI	CAGTG	2 cut(s)	20, 391
BveI	ACCTGC	1 cut(s)	1066
Cac8I	GCNNGC	2 cut(s)	493, 895
CaiI	CAGNNNCTG	1 cut(s)	119
CfoI	GCGC	1 cut(s)	313
Cfr13I	GGNCC	4 cut(s)	88, 367, 1078, 1631
Csp6I	GTAC	5 cut(s)	167, 536, 1053, 1326, 1596
CviAII	CATG	5 cut(s)	610, 764, 914, 964, 1075
CviQI	GTAC	5 cut(s)	167, 536, 1053, 1326, 1596
DdeI	CTNAG	5 cut(s)	737, 744, 1013, 1454, 1511
DpnI	GATC	2 cut(s)	825, 936
DpnII	GATC	2 cut(s)	823, 934
DraIII	CACNNNGTG	1 cut(s)	244
DriI	GACNNNNNGTC	1 cut(s)	739
Eam1104I	CTCTTC	4 cut(s)	783, 1062, 1131, 1526
Eam1105I	GACNNNNNGTC	1 cut(s)	739
EarI	CTCTTC	4 cut(s)	783, 1062, 1131, 1526
Eco24I	GRGCYC	1 cut(s)	795
Eco47I	GGWCC	1 cut(s)	1078
Eco57I	CTGAAG	2 cut(s)	396, 711
Eco81I	CCTNAGG	1 cut(s)	737
EcoRI	GAATTC	1 cut(s)	882
EcoRII	CCWGG	5 cut(s)	90, 897, 1436, 1627, 1663
EcoT22I	ATGCAT	1 cut(s)	358
EcoT38I	GRGCYC	1 cut(s)	795
FaeI	CATG	5 cut(s)	613, 767, 917, 967, 1078
FaqI	GGGAC	1 cut(s)	712
FatI	CATG	5 cut(s)	609, 763, 913, 963, 1074
FauNDI	CATATG	2 cut(s)	50, 1129
FblI	GTMKAC	1 cut(s)	1603
Fnu4HI	GCNGC	4 cut(s)	60, 1293, 1349, 1434
FokI	GGATG	4 cut(s)	152, 161, 565, 1163
FriOI	GRGCYC	1 cut(s)	795
Fsp4HI	GCNGC	4 cut(s)	60, 1293, 1349, 1434
FspBI	CTAG	5 cut(s)	170, 704, 1305, 1494, 1574
GlaI	GCGC	1 cut(s)	312
GluI	GCNGC	4 cut(s)	60, 1293, 1349, 1434
GsuI	CTGGAG	1 cut(s)	1548
HaeIII	GGCC	3 cut(s)	89, 369, 1633
HapII	CCGG	2 cut(s)	674, 1468
HhaI	GCGC	1 cut(s)	313
Hin1I	GRCGYC	1 cut(s)	578
Hin1II	CATG	5 cut(s)	613, 767, 917, 967, 1078
Hin6I	GCGC	1 cut(s)	311
HinP1I	GCGC	1 cut(s)	311
HindIII	AAGCTT	1 cut(s)	725
HinfI	GANTC	7 cut(s)	320, 616, 700, 1141, 1180, 1223, 1541
HpaII	CCGG	2 cut(s)	674, 1468
HphI	GGTGA	4 cut(s)	830, 929, 941, 1617
Hpy166II	GTNNAC	3 cut(s)	607, 1055, 1604
Hpy188I	TCNGA	7 cut(s)	463, 691, 745, 759, 973, 1228, 1504
Hpy8I	GTNNAC	3 cut(s)	607, 1055, 1604
HpyAV	CCTTC	6 cut(s)	79, 130, 188, 280, 915, 1282
HpyCH4III	ACNGT	3 cut(s)	15, 1360, 1555
HpyCH4IV	ACGT	1 cut(s)	578
HpyCH4V	TGCA	2 cut(s)	356, 967
HpyF10VI	GCNNNNNNNGC	4 cut(s)	95, 724, 1433, 1516
HpyF3I	CTNAG	5 cut(s)	737, 744, 1013, 1454, 1511
HpySE526I	ACGT	1 cut(s)	578
Hsp92I	GRCGYC	1 cut(s)	578
Hsp92II	CATG	5 cut(s)	613, 767, 917, 967, 1078
HspAI	GCGC	1 cut(s)	311
Kpn2I	TCCGGA	1 cut(s)	673
Kzo9I	GATC	2 cut(s)	823, 934
LguI	GCTCTTC	2 cut(s)	783, 1526
LmnI	GCTCC	5 cut(s)	50, 590, 841, 859, 1507
Lsp1109I	GCAGC	4 cut(s)	46, 1279, 1335, 1420
LweI	GCATC	2 cut(s)	343, 1372
MaeI	CTAG	5 cut(s)	170, 704, 1305, 1494, 1574
MaeII	ACGT	1 cut(s)	578
MaeIII	GTNAC	7 cut(s)	325, 916, 991, 1094, 1167, 1240, 1388
MalI	GATC	2 cut(s)	825, 936
MboI	GATC	2 cut(s)	823, 934
MhlI	GDGCHC	1 cut(s)	795
MlyI	GAGTC	2 cut(s)	314, 694
Mph1103I	ATGCAT	1 cut(s)	358
MroI	TCCGGA	1 cut(s)	673
MroXI	GAANNNNTTC	2 cut(s)	726, 1222
MseI	TTAA	4 cut(s)	423, 572, 1100, 1256
MslI	CAYNNNNRTG	1 cut(s)	1149
MspI	CCGG	2 cut(s)	674, 1468
MspR9I	CCNGG	6 cut(s)	92, 899, 1438, 1468, 1629, 1665
MvaI	CCWGG	5 cut(s)	92, 899, 1438, 1629, 1665
MwoI	GCNNNNNNNGC	4 cut(s)	95, 724, 1433, 1516
NciI	CCSGG	1 cut(s)	1468
NdeI	CATATG	2 cut(s)	50, 1129
NdeII	GATC	2 cut(s)	823, 934
NlaIII	CATG	5 cut(s)	613, 767, 917, 967, 1078
NlaIV	GGNNCC	8 cut(s)	46, 490, 672, 855, 903, 1416, 1482, 1669
NmuCI	GTSAC	2 cut(s)	1094, 1388
NsiI	ATGCAT	1 cut(s)	358
NspV	TTCGAA	1 cut(s)	196
PaqCI	CACCTGC	1 cut(s)	1066
PciSI	GCTCTTC	2 cut(s)	783, 1526
PdmI	GAANNNNTTC	2 cut(s)	726, 1222
PfeI	GAWTC	5 cut(s)	616, 1141, 1180, 1223, 1541
PflMI	CCANNNNNTGG	1 cut(s)	1598
PfoI	TCCNGGA	1 cut(s)	1466
PkrI	GCNGC	4 cut(s)	61, 1294, 1350, 1435
PleI	GAGTC	2 cut(s)	314, 694
PpsI	GAGTC	2 cut(s)	314, 694
Psp6I	CCWGG	5 cut(s)	90, 897, 1436, 1627, 1663
PspGI	CCWGG	5 cut(s)	90, 897, 1436, 1627, 1663
PspN4I	GGNNCC	8 cut(s)	46, 490, 672, 855, 903, 1416, 1482, 1669
PspPI	GGNCC	4 cut(s)	88, 367, 1078, 1631
PsrI	GAACNNNNNNTAC	2 cut(s)	1473, 1505
PstNI	CAGNNNCTG	1 cut(s)	119
RsaI	GTAC	5 cut(s)	168, 537, 1054, 1327, 1597
RsaNI	GTAC	5 cut(s)	167, 536, 1053, 1326, 1596
RseI	CAYNNNNRTG	1 cut(s)	1149
SapI	GCTCTTC	2 cut(s)	783, 1526
SaqAI	TTAA	4 cut(s)	423, 572, 1100, 1256
SatI	GCNGC	4 cut(s)	60, 1293, 1349, 1434
Sau3AI	GATC	2 cut(s)	823, 934
Sau96I	GGNCC	4 cut(s)	88, 367, 1078, 1631
ScaI	AGTACT	1 cut(s)	1597
SchI	GAGTC	2 cut(s)	314, 694
ScrFI	CCNGG	6 cut(s)	92, 899, 1438, 1468, 1629, 1665
SduI	GDGCHC	1 cut(s)	795
SfaNI	GCATC	2 cut(s)	343, 1372
SfcI	CTRYAG	1 cut(s)	861
SfuI	TTCGAA	1 cut(s)	196
SinI	GGWCC	1 cut(s)	1078
SmiMI	CAYNNNNRTG	1 cut(s)	1149
SmlI	CTYRAG	6 cut(s)	80, 621, 639, 1062, 1643, 1679
SmoI	CTYRAG	6 cut(s)	80, 621, 639, 1062, 1643, 1679
SspI	AATATT	1 cut(s)	771
SspMI	CTAG	5 cut(s)	170, 704, 1305, 1494, 1574
StyD4I	CCNGG	6 cut(s)	90, 897, 1436, 1466, 1627, 1663
TaaI	ACNGT	3 cut(s)	15, 1360, 1555
TaiI	ACGT	1 cut(s)	581
TaqI	TCGA	2 cut(s)	196, 949
TatI	WGTACW	3 cut(s)	535, 1052, 1595
TfiI	GAWTC	5 cut(s)	616, 1141, 1180, 1223, 1541
Tru1I	TTAA	4 cut(s)	423, 572, 1100, 1256
Tru9I	TTAA	4 cut(s)	423, 572, 1100, 1256
TscAI	CASTG	2 cut(s)	20, 391
TseFI	GTSAC	2 cut(s)	1094, 1388
TseI	GCWGC	4 cut(s)	59, 1292, 1348, 1433
Tsp45I	GTSAC	2 cut(s)	1094, 1388
TspDTI	ATGAA	6 cut(s)	411, 447, 531, 780, 1116, 1350
TspRI	CASTG	2 cut(s)	20, 391
Van91I	CCANNNNNTGG	1 cut(s)	1598
VpaK11BI	GGWCC	1 cut(s)	1078
XapI	RAATTY	4 cut(s)	129, 482, 882, 1471
XcmI	CCANNNNNNNNNTGG	1 cut(s)	875
XmiI	GTMKAC	1 cut(s)	1603
XmnI	GAANNNNTTC	2 cut(s)	726, 1222
XspI	CTAG	5 cut(s)	170, 704, 1305, 1494, 1574
ZraI	GACGTC	1 cut(s)	579
ZrmI	AGTACT	1 cut(s)	1597
Zsp2I	ATGCAT	1 cut(s)	358

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.