Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 301 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 163, 164, 201, 202 |
| AgsI | TTSAA | 1 cut(s) | 349 |
| AluBI | AGCT | 1 cut(s) | 332 |
| AluI | AGCT | 1 cut(s) | 332 |
| AlwI | GGATC | 1 cut(s) | 301 |
| AoxI | GGCC | 2 cut(s) | 37, 355 |
| ApeKI | GCWGC | 2 cut(s) | 98, 248 |
| AspS9I | GGNCC | 1 cut(s) | 38 |
| AsuHPI | GGTGA | 2 cut(s) | 72, 179 |
| BbvCI | CCTCAGC | 1 cut(s) | 5 |
| BbvI | GCAGC | 2 cut(s) | 85, 235 |
| BccI | CCATC | 3 cut(s) | 91, 158, 347 |
| BceAI | ACGGC | 1 cut(s) | 238 |
| BclI | TGATCA | 1 cut(s) | 22 |
| BisI | GCNGC | 2 cut(s) | 99, 249 |
| BlsI | GCNGC | 2 cut(s) | 100, 250 |
| BmgT120I | GGNCC | 1 cut(s) | 38 |
| BmiI | GGNNCC | 1 cut(s) | 280 |
| Bpu10I | CCTNAGC | 1 cut(s) | 5 |
| BsaJI | CCNNGG | 1 cut(s) | 310 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 163, 164, 201, 202 |
| BseDI | CCNNGG | 1 cut(s) | 310 |
| BseGI | GGATG | 5 cut(s) | 83, 146, 341, 358, 361 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 163, 164, 201, 202 |
| BseXI | GCAGC | 2 cut(s) | 85, 235 |
| Bsh1285I | CGRYCG | 1 cut(s) | 111 |
| BshFI | GGCC | 2 cut(s) | 39, 357 |
| BsiEI | CGRYCG | 1 cut(s) | 111 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 163, 164, 201, 202 |
| BsmI | GAATGC | 1 cut(s) | 341 |
| BsnI | GGCC | 2 cut(s) | 39, 357 |
| Bsp143I | GATC | 4 cut(s) | 22, 60, 108, 306 |
| Bsp19I | CCATGG | 1 cut(s) | 310 |
| BspANI | GGCC | 2 cut(s) | 39, 357 |
| BspLI | GGNNCC | 1 cut(s) | 280 |
| BspPI | GGATC | 1 cut(s) | 301 |
| BssECI | CCNNGG | 1 cut(s) | 310 |
| BssMI | GATC | 4 cut(s) | 22, 60, 108, 306 |
| BssT1I | CCWWGG | 1 cut(s) | 310 |
| Bst4CI | ACNGT | 1 cut(s) | 137 |
| BstDEI | CTNAG | 3 cut(s) | 5, 177, 263 |
| BstDSI | CCRYGG | 1 cut(s) | 310 |
| BstF5I | GGATG | 5 cut(s) | 83, 146, 341, 358, 361 |
| BstKTI | GATC | 4 cut(s) | 25, 63, 111, 309 |
| BstMBI | GATC | 4 cut(s) | 22, 60, 108, 306 |
| BstMCI | CGRYCG | 1 cut(s) | 111 |
| BstV1I | GCAGC | 2 cut(s) | 85, 235 |
| BstX2I | RGATCY | 1 cut(s) | 306 |
| BstYI | RGATCY | 1 cut(s) | 306 |
| BsuRI | GGCC | 2 cut(s) | 39, 357 |
| BtgI | CCRYGG | 1 cut(s) | 310 |
| BtsCI | GGATG | 5 cut(s) | 83, 146, 341, 358, 361 |
| Cfr13I | GGNCC | 1 cut(s) | 38 |
| CviAII | CATG | 2 cut(s) | 95, 311 |
| CviJI | RGCY | 5 cut(s) | 15, 39, 225, 332, 357 |
| CviKI_1 | RGCY | 5 cut(s) | 15, 39, 225, 332, 357 |
| DdeI | CTNAG | 3 cut(s) | 5, 177, 263 |
| DpnI | GATC | 4 cut(s) | 24, 62, 110, 308 |
| DpnII | GATC | 4 cut(s) | 22, 60, 108, 306 |
| Eco130I | CCWWGG | 1 cut(s) | 310 |
| EcoT14I | CCWWGG | 1 cut(s) | 310 |
| ErhI | CCWWGG | 1 cut(s) | 310 |
| FaeI | CATG | 2 cut(s) | 98, 314 |
| FaiI | YATR | 4 cut(s) | 96, 140, 312, 329 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 200, 232 |
| FatI | CATG | 2 cut(s) | 94, 310 |
| FbaI | TGATCA | 1 cut(s) | 22 |
| Fnu4HI | GCNGC | 2 cut(s) | 99, 249 |
| FokI | GGATG | 5 cut(s) | 70, 133, 328, 348, 365 |
| Fsp4HI | GCNGC | 2 cut(s) | 99, 249 |
| GluI | GCNGC | 2 cut(s) | 99, 249 |
| HaeIII | GGCC | 2 cut(s) | 39, 357 |
| Hin1II | CATG | 2 cut(s) | 98, 314 |
| HinfI | GANTC | 2 cut(s) | 113, 184 |
| HphI | GGTGA | 2 cut(s) | 72, 179 |
| Hpy166II | GTNNAC | 1 cut(s) | 232 |
| Hpy188I | TCNGA | 1 cut(s) | 60 |
| Hpy188III | TCNNGA | 1 cut(s) | 26 |
| Hpy8I | GTNNAC | 1 cut(s) | 232 |
| Hpy99I | CGWCG | 1 cut(s) | 224 |
| HpyAV | CCTTC | 4 cut(s) | 29, 355, 368, 375 |
| HpyCH4III | ACNGT | 1 cut(s) | 137 |
| HpyCH4V | TGCA | 2 cut(s) | 299, 339 |
| HpyF3I | CTNAG | 3 cut(s) | 5, 177, 263 |
| Hsp92II | CATG | 2 cut(s) | 98, 314 |
| Ksp22I | TGATCA | 1 cut(s) | 22 |
| Kzo9I | GATC | 4 cut(s) | 22, 60, 108, 306 |
| LpnPI | CCDG | 3 cut(s) | 84, 204, 237 |
| Lsp1109I | GCAGC | 2 cut(s) | 85, 235 |
| MaeIII | GTNAC | 1 cut(s) | 167 |
| MalI | GATC | 4 cut(s) | 24, 62, 110, 308 |
| MboI | GATC | 4 cut(s) | 22, 60, 108, 306 |
| MboII | GAAGA | 3 cut(s) | 47, 231, 234 |
| MflI | RGATCY | 1 cut(s) | 306 |
| MluCI | AATT | 3 cut(s) | 141, 199, 288 |
| MnlI | CCTC | 2 cut(s) | 115, 198 |
| MseI | TTAA | 4 cut(s) | 132, 173, 212, 287 |
| Mva1269I | GAATGC | 1 cut(s) | 341 |
| NcoI | CCATGG | 1 cut(s) | 310 |
| NdeII | GATC | 4 cut(s) | 22, 60, 108, 306 |
| NlaIII | CATG | 2 cut(s) | 98, 314 |
| NlaIV | GGNNCC | 1 cut(s) | 280 |
| NmuCI | GTSAC | 1 cut(s) | 167 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 113 |
| PctI | GAATGC | 1 cut(s) | 341 |
| PfeI | GAWTC | 2 cut(s) | 113, 184 |
| PkrI | GCNGC | 2 cut(s) | 100, 250 |
| Ple19I | CGATCG | 1 cut(s) | 111 |
| PspN4I | GGNNCC | 1 cut(s) | 280 |
| PspPI | GGNCC | 1 cut(s) | 38 |
| PsuI | RGATCY | 1 cut(s) | 306 |
| PvuI | CGATCG | 1 cut(s) | 111 |
| SaqAI | TTAA | 4 cut(s) | 132, 173, 212, 287 |
| SatI | GCNGC | 2 cut(s) | 99, 249 |
| Sau3AI | GATC | 4 cut(s) | 22, 60, 108, 306 |
| Sau96I | GGNCC | 1 cut(s) | 38 |
| SetI | ASST | 3 cut(s) | 11, 107, 334 |
| Sse9I | AATT | 3 cut(s) | 141, 199, 288 |
| StyI | CCWWGG | 1 cut(s) | 310 |
| TaaI | ACNGT | 1 cut(s) | 137 |
| TaqI | TCGA | 3 cut(s) | 107, 111, 219 |
| TasI | AATT | 3 cut(s) | 141, 199, 288 |
| TfiI | GAWTC | 2 cut(s) | 113, 184 |
| Tru1I | TTAA | 4 cut(s) | 132, 173, 212, 287 |
| Tru9I | TTAA | 4 cut(s) | 132, 173, 212, 287 |
| TseFI | GTSAC | 1 cut(s) | 167 |
| TseI | GCWGC | 2 cut(s) | 98, 248 |
| Tsp45I | GTSAC | 1 cut(s) | 167 |
| TspDTI | ATGAA | 4 cut(s) | 66, 83, 135, 350 |