FvH4_4g15805

Retrotransposon gag protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000370
Physical Location & Seq
Reverse (-)
19730039 .. 19733712
3674 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g15805.t1

Sequence Viewer

Length: 1206 bp
ATGAGGGCGGCGACCCGGTTTGCAACCCGACCGGAATTCTCCTCTCCGGCGGCGGCGACACAGCTTGGAAACGATGCAGCTGGATTTGAGGTGAGTAACATCTCACCAAGGTCCACTTTGGGACCAAATATTTATAATTATTATGATGATGATTATGATGTTGATTTTGATGATGATGATAATGATAATTGTTATGATGATAATTTTGATGATGATGAGATTAATGATGATGATGATAATGTTGATGGAAATGTTGATGATATGATGATTATGATGATAATTGTTATGATGACGATGGTGATGGATCCTCCGCAAGGGAAAGCTAGAGGCAGAGGTAGGGCCAGAGGGGCCGGTAGAGCCAGAGGGGCAGGTGGGGCCAGAGGCAGAGGTAGGGCACCACCTGTGGATGATTTCTTTGAGGAGGAGATGGTGTTAGACGTGCCAGTGCCAGTTGCAGTAGATGATGGTCTACGATTGGCCAGGCTGGCTCAGGGTATTATCAGGTTAGGAGCGCCTTCCTTTCTTAGAGGTACGGACAACCTTGTAGCGGATCACTGGATAGAGGGCATGGAGACATACTTTACCCTTATCACGTGCACGGAGATTGAGAAGATGCGTATTGCTACGTTTCTTCTCAAGGATGAGGCACGAGTATGGTGGAGCGGGGTAGAGAGAGCTAGAGATGTGACCGCTTTGTCTTGGGAGGGGTTCAAACAGCTTTTTCGGGAGAAGTATTTTCCTGATACTGTGAGGGAGCAGTTGGAGTTGGAGTTCATAGCCCTAGTGCAGGGCTTGATGAGTGTCAGGGACTATGAGGCACGTTTTCTCAGCTGTATCGATTCGCGAGAGAGATGGATGCAGTGGCATTGTCACGGAAGTTCATTCGGGGGATTGAGAGATGTGCATGGGAAAGGGAAGGCCATTGCAGGGGGTAGTGGCACTGAGGGTCATCATGGTGCGTTTGGGAAGAGGCAGTGGACTGATCAGCAGGCTCTAGCTACAGTGCCAGCTGCACCTATCCAACAGGCAGAGCCTTTGAGATGCTACCGTTGCAATGGGTTGGGTCATATTTTGAAGGAGTGCATCAAGCGGAAGACTCAAGCTTGCTATAGTTGTGGGCAAGTGGGGCACCTTGCTAGGGAGTGTACTCAACCTCAGGAGGACAGGCAGGGATACCAGCAGAGGCAGTTGCCTCCGACCCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVP_2 Retrotrans_gag zf-CCHC

Protein Analysis

402

Amino Acids

44.97

Weight (kDa)

4.97

Isoelectric Point (pI)

45.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotrans_gag PF03732 206 - 281 1e-13 Retrotransposon gag protein
zf-CCHC PF00098 368 - 384 2.2e-07 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000370)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29481 FvH4_2g11454 FvH4_3g19661 FvH4_3g28463 FvH4_3g31691 FvH4_3g34551 FvH4_3g35241 FvH4_4g06575 FvH4_4g09082 FvH4_4g15804 FvH4_4g15805 FvH4_4g16178 FvH4_4g16282 FvH4_5g25163 FvH4_6g27413 FvH4_7g02962 FvH4_7g04361
malus_domestica MD01G1095000.v1.1 MD02G1270200.v1.1 MD02G1270300.v1.1 MD02G1270400.v1.1 MD06G1059100.v1.1 MD08G1226500.v1.1
prunus_persica Prupe.1G169500_v2.0.a1 Prupe.5G195800_v2.0.a1
pyrus_communis pycom01g00010 pycom01g00770 pycom02g23140 pycom03g11760 pycom04g06090 pycom05g06900 pycom05g08070 pycom05g14500 pycom06g03050 pycom07g06250 pycom07g07540 pycom07g10580 pycom08g04990 pycom1146g00060 pycom11g01080 pycom11g15270 pycom11g15460 pycom11g24900 pycom12419g00150 pycom12424g00120 pycom13g08740 pycom13g24950 pycom13g25960 pycom13g26030 pycom13g27820 pycom16g23270 pycom16g25020 pycom16g25960 pycom17g07780 pycom17g08210 pycom17g13100
rosa_chinensis RchiOBHm_Chr1g0329421 RchiOBHm_Chr4g0397711 RchiOBHm_Chr4g0403481 RchiOBHm_Chr5g0019091 RchiOBHm_Chr5g0049101
rosa_laevigata RLG00000029892
rosa_multiflora Rmu_sc0001866.1_g000007
rosa_roxburghii Rroxscaffold_2G00094160 Rroxscaffold_3G00229110 Rroxscaffold_4G00321100 Rroxscaffold_7G00196040 Rroxscaffold_7G00196280
rosa_rugosa Rorug05G0160500 Rorug06G0096500
rosa_samantha Rh1AG098600 Rh1AG098800 Rh1BG078200 Rh1BG078700 Rh1BG178500 Rh1CG094600 Rh1CG094900 Rh1DG101700 Rh1DG109600 Rh2AG175800 Rh2AG175900 Rh2AG511400 Rh2BG114700 Rh2CG042200 Rh2CG116600 Rh2CG317500 Rh2DG327700 Rh2DG337800 Rh4CG142700 Rh4DG113100 Rh5BG335800 Rh5CG360600 Rh5DG352000 Rh6BG071400 Rh6BG417100 Rh6CG463300 Rh6CG463400 Rh7BG186600 Rh7CG196500 Rh7CG196600 Rh7CG448900 Rh7DG228300
rosa_wichuraiana Rw4G006560 Rw4G017340 Rw5G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 135
AarI CACCTGC 1 cut(s) 359
AasI GACNNNNNNGTC 1 cut(s) 694
Acc36I ACCTGC 1 cut(s) 359
AccB1I GGYRCC 2 cut(s) 394, 1128
AccBSI CCGCTC 1 cut(s) 663
AccI GTMKAC 1 cut(s) 469
AccII CGCG 1 cut(s) 844
AciI CCGC 8 cut(s) 8, 50, 53, 311, 548, 663, 690, 1090
AclWI GGATC 3 cut(s) 299, 312, 558
AcoI YGGCCR 1 cut(s) 477
AcsI RAATTY 1 cut(s) 35
AcvI CACGTG 1 cut(s) 594
AfaI GTAC 2 cut(s) 532, 1147
AfiI CCNNNNNNNGG 5 cut(s) 314, 547, 787, 927, 1138
AgsI TTSAA 2 cut(s) 712, 1075
AjiI CACGTC 1 cut(s) 439
AjnI CCWGG 1 cut(s) 479
AloI GAACNNNNNNTCC 2 cut(s) 755, 787
AluBI AGCT 9 cut(s) 64, 80, 323, 677, 718, 831, 998, 1010, 1103
AluI AGCT 9 cut(s) 64, 80, 323, 677, 718, 831, 998, 1010, 1103
Alw21I GWGCWC 1 cut(s) 599
Alw26I GTCTC 1 cut(s) 566
Alw44I GTGCAC 1 cut(s) 595
AlwI GGATC 3 cut(s) 299, 312, 558
AoxI GGCC 5 cut(s) 339, 348, 375, 477, 918
ApaLI GTGCAC 1 cut(s) 595
ApeKI GCWGC 2 cut(s) 77, 1010
ApoI RAATTY 1 cut(s) 35
AseI ATTAAT 1 cut(s) 222
AspLEI GCGC 1 cut(s) 514
AspS9I GGNCC 5 cut(s) 111, 122, 339, 348, 375
AsuC2I CCSGG 1 cut(s) 16
AsuHPI GGTGA 3 cut(s) 96, 103, 310
AvaII GGWCC 2 cut(s) 111, 122
AxyI CCTNAGG 1 cut(s) 1155
BaeGI GKGCMC 3 cut(s) 397, 599, 1131
BalI TGGCCA 1 cut(s) 479
BamHI GGATCC 1 cut(s) 304
BanI GGYRCC 2 cut(s) 394, 1128
BauI CACGAG 1 cut(s) 648
BbrPI CACGTG 1 cut(s) 594
BbsI GAAGAC 1 cut(s) 1100
Bbv12I GWGCWC 1 cut(s) 599
BbvI GCAGC 2 cut(s) 89, 997
BccI CCATC 6 cut(s) 239, 289, 295, 421, 458, 846
BciT130I CCWGG 1 cut(s) 481
BciVI GTATCC 1 cut(s) 1166
BclI TGATCA 1 cut(s) 982
BcnI CCSGG 1 cut(s) 16
BcoDI GTCTC 1 cut(s) 566
BfaI CTAG 5 cut(s) 324, 678, 782, 995, 1137
BfmI CTRYAG 2 cut(s) 999, 1108
BfoI RGCGCY 1 cut(s) 515
BfuAI ACCTGC 1 cut(s) 359
BfuI GTATCC 1 cut(s) 1166
BglI GCCNNNNNGGC 3 cut(s) 347, 365, 485
BisI GCNGC 5 cut(s) 9, 51, 54, 78, 1011
BlsI GCNGC 5 cut(s) 10, 52, 55, 79, 1012
Bme1390I CCNGG 2 cut(s) 16, 481
Bme18I GGWCC 2 cut(s) 111, 122
BmgBI CACGTC 1 cut(s) 439
BmgT120I GGNCC 5 cut(s) 111, 122, 339, 348, 375
BmiI GGNNCC 6 cut(s) 123, 306, 349, 376, 396, 1130
BmrFI CCNGG 2 cut(s) 16, 481
BmrI ACTGGG 1 cut(s) 1195
BmsI GCATC 5 cut(s) 64, 603, 846, 1031, 1092
BmuI ACTGGG 1 cut(s) 1195
BpiI GAAGAC 1 cut(s) 1100
Bpu10I CCTNAGC 1 cut(s) 489
BpuEI CTTGAG 2 cut(s) 620, 1083
BpuMI CCSGG 1 cut(s) 16
Bsa29I ATCGAT 1 cut(s) 837
BsaAI YACGTR 1 cut(s) 594
BsaJI CCNNGG 1 cut(s) 107
BsaWI WCCGGW 1 cut(s) 31
BsaXI ACNNNNNCTCC 4 cut(s) 416, 446, 755, 785
Bsc4I CCNNNNNNNGG 5 cut(s) 314, 547, 787, 927, 1138
Bse118I RCCGGY 1 cut(s) 350
Bse1I ACTGG 4 cut(s) 443, 449, 560, 1201
Bse21I CCTNAGG 1 cut(s) 1155
Bse3DI GCAATG 2 cut(s) 921, 1060
BseBI CCWGG 1 cut(s) 481
BseCI ATCGAT 1 cut(s) 837
BseDI CCNNGG 1 cut(s) 107
BseGI GGATG 3 cut(s) 412, 646, 861
BseLI CCNNNNNNNGG 5 cut(s) 314, 547, 787, 927, 1138
BseMI GCAATG 2 cut(s) 921, 1060
BseMII CTCAG 4 cut(s) 503, 841, 933, 1169
BseNI ACTGG 4 cut(s) 443, 449, 560, 1201
BseRI GAGGAG 3 cut(s) 31, 434, 437
BseSI GKGCMC 3 cut(s) 397, 599, 1131
BseXI GCAGC 2 cut(s) 89, 997
BsgI GTGCAG 2 cut(s) 806, 996
Bsh1236I CGCG 1 cut(s) 844
Bsh1285I CGRYCG 1 cut(s) 32
BshFI GGCC 5 cut(s) 341, 350, 377, 479, 920
BshNI GGYRCC 2 cut(s) 394, 1128
BshVI ATCGAT 1 cut(s) 837
BsiEI CGRYCG 1 cut(s) 32
BsiHKAI GWGCWC 1 cut(s) 599
BsiSI CCGG 4 cut(s) 16, 32, 47, 351
BslFI GGGAC 2 cut(s) 135, 821
BslI CCNNNNNNNGG 5 cut(s) 314, 547, 787, 927, 1138
BsmAI GTCTC 1 cut(s) 566
BsmFI GGGAC 2 cut(s) 135, 821
BsnI GGCC 5 cut(s) 341, 350, 377, 479, 920
Bsp1286I GDGCHC 3 cut(s) 397, 599, 1131
Bsp143I GATC 3 cut(s) 304, 550, 982
Bsp68I TCGCGA 1 cut(s) 844
BspACI CCGC 8 cut(s) 8, 50, 53, 311, 548, 663, 690, 1090
BspANI GGCC 5 cut(s) 341, 350, 377, 479, 920
BspCNI CTCAG 4 cut(s) 502, 840, 934, 1168
BspDI ATCGAT 1 cut(s) 837
BspFNI CGCG 1 cut(s) 844
BspLI GGNNCC 6 cut(s) 123, 306, 349, 376, 396, 1130
BspMI ACCTGC 1 cut(s) 359
BspPI GGATC 3 cut(s) 299, 312, 558
BspT107I GGYRCC 2 cut(s) 394, 1128
BsrBI CCGCTC 1 cut(s) 663
BsrDI GCAATG 2 cut(s) 921, 1060
BsrFI RCCGGY 1 cut(s) 350
BsrI ACTGG 4 cut(s) 443, 449, 560, 1201
BssAI RCCGGY 1 cut(s) 350
BssECI CCNNGG 1 cut(s) 107
BssMI GATC 3 cut(s) 304, 550, 982
BssSI CACGAG 1 cut(s) 648
BssT1I CCWWGG 1 cut(s) 107
Bst2BI CACGAG 1 cut(s) 648
Bst2UI CCWGG 1 cut(s) 481
Bst4CI ACNGT 3 cut(s) 748, 1003, 1049
Bst6I CTCTTC 1 cut(s) 962
BstBAI YACGTR 1 cut(s) 594
BstC8I GCNNGC 4 cut(s) 486, 990, 1008, 1105
BstDEI CTNAG 5 cut(s) 489, 524, 827, 942, 1155
BstENI CCTNNNNNAGG 2 cut(s) 312, 785
BstF5I GGATG 3 cut(s) 412, 646, 861
BstFNI CGCG 1 cut(s) 844
BstH2I RGCGCY 1 cut(s) 515
BstHHI GCGC 1 cut(s) 514
BstKTI GATC 3 cut(s) 307, 553, 985
BstMAI GTCTC 1 cut(s) 566
BstMBI GATC 3 cut(s) 304, 550, 982
BstMCI CGRYCG 1 cut(s) 32
BstMWI GCNNNNNNNGC 7 cut(s) 347, 356, 365, 374, 485, 1050, 1126
BstNI CCWGG 1 cut(s) 481
BstSCI CCNGG 2 cut(s) 14, 479
BstSFI CTRYAG 2 cut(s) 999, 1108
BstSLI GKGCMC 3 cut(s) 397, 599, 1131
BstUI CGCG 1 cut(s) 844
BstV1I GCAGC 2 cut(s) 89, 997
BstV2I GAAGAC 1 cut(s) 1100
BstX2I RGATCY 1 cut(s) 304
BstYI RGATCY 1 cut(s) 304
Bsu15I ATCGAT 1 cut(s) 837
Bsu36I CCTNAGG 1 cut(s) 1155
BsuI GTATCC 1 cut(s) 1166
BsuRI GGCC 5 cut(s) 341, 350, 377, 479, 920
BsuTUI ATCGAT 1 cut(s) 837
BtrI CACGTC 1 cut(s) 439
BtsCI GGATG 3 cut(s) 412, 646, 861
BtsI GCAGTG 2 cut(s) 866, 980
BtsIMutI CAGTG 6 cut(s) 450, 553, 866, 939, 980, 1008
BtuMI TCGCGA 1 cut(s) 844
BveI ACCTGC 1 cut(s) 359
Cac8I GCNNGC 4 cut(s) 486, 990, 1008, 1105
CfoI GCGC 1 cut(s) 514
Cfr10I RCCGGY 1 cut(s) 350
Cfr13I GGNCC 5 cut(s) 111, 122, 339, 348, 375
ClaI ATCGAT 1 cut(s) 837
Csp6I GTAC 2 cut(s) 531, 1146
CviAII CATG 3 cut(s) 568, 905, 953
CviQI GTAC 2 cut(s) 531, 1146
DdeI CTNAG 5 cut(s) 489, 524, 827, 942, 1155
DpnI GATC 3 cut(s) 306, 552, 984
DpnII GATC 3 cut(s) 304, 550, 982
DrdI GACNNNNNNGTC 1 cut(s) 694
DseDI GACNNNNNNGTC 1 cut(s) 694
EaeI YGGCCR 1 cut(s) 477
Eam1104I CTCTTC 1 cut(s) 962
EarI CTCTTC 1 cut(s) 962
Eco130I CCWWGG 1 cut(s) 107
Eco47I GGWCC 2 cut(s) 111, 122
Eco72I CACGTG 1 cut(s) 594
Eco81I CCTNAGG 1 cut(s) 1155
EcoNI CCTNNNNNAGG 2 cut(s) 312, 785
EcoRI GAATTC 1 cut(s) 35
EcoRII CCWGG 1 cut(s) 479
EcoT14I CCWWGG 1 cut(s) 107
ErhI CCWWGG 1 cut(s) 107
FaeI CATG 3 cut(s) 571, 908, 956
FalI AAGNNNNNCTT 2 cut(s) 100, 132
FaqI GGGAC 2 cut(s) 135, 821
FatI CATG 3 cut(s) 567, 904, 952
FauI CCCGC 1 cut(s) 656
FbaI TGATCA 1 cut(s) 982
FblI GTMKAC 1 cut(s) 469
Fnu4HI GCNGC 5 cut(s) 9, 51, 54, 78, 1011
FokI GGATG 3 cut(s) 419, 653, 868
Fsp4HI GCNGC 5 cut(s) 9, 51, 54, 78, 1011
FspBI CTAG 5 cut(s) 324, 678, 782, 995, 1137
GlaI GCGC 1 cut(s) 513
GluI GCNGC 5 cut(s) 9, 51, 54, 78, 1011
HaeII RGCGCY 1 cut(s) 515
HaeIII GGCC 5 cut(s) 341, 350, 377, 479, 920
HapII CCGG 4 cut(s) 16, 32, 47, 351
HhaI GCGC 1 cut(s) 514
Hin1II CATG 3 cut(s) 571, 908, 956
Hin6I GCGC 1 cut(s) 512
HinP1I GCGC 1 cut(s) 512
HindIII AAGCTT 1 cut(s) 1101
HinfI GANTC 2 cut(s) 839, 1096
HpaII CCGG 4 cut(s) 16, 32, 47, 351
HphI GGTGA 3 cut(s) 96, 103, 310
Hpy166II GTNNAC 5 cut(s) 114, 470, 597, 978, 1146
Hpy188I TCNGA 1 cut(s) 1197
Hpy188III TCNNGA 4 cut(s) 725, 740, 843, 1157
Hpy8I GTNNAC 5 cut(s) 114, 470, 597, 978, 1146
HpyAV CCTTC 3 cut(s) 525, 910, 1069
HpyCH4III ACNGT 3 cut(s) 748, 1003, 1049
HpyCH4IV ACGT 4 cut(s) 438, 593, 626, 820
HpyF10VI GCNNNNNNNGC 7 cut(s) 347, 356, 365, 374, 485, 1050, 1126
HpyF3I CTNAG 5 cut(s) 489, 524, 827, 942, 1155
HpySE526I ACGT 4 cut(s) 438, 593, 626, 820
Hsp92II CATG 3 cut(s) 571, 908, 956
HspAI GCGC 1 cut(s) 512
Ksp22I TGATCA 1 cut(s) 982
Kzo9I GATC 3 cut(s) 304, 550, 982
LmnI GCTCC 3 cut(s) 509, 660, 754
Lsp1109I GCAGC 2 cut(s) 89, 997
LweI GCATC 5 cut(s) 64, 603, 846, 1031, 1092
MaeI CTAG 5 cut(s) 324, 678, 782, 995, 1137
MaeII ACGT 4 cut(s) 438, 593, 626, 820
MaeIII GTNAC 3 cut(s) 95, 685, 869
MalI GATC 3 cut(s) 306, 552, 984
MbiI CCGCTC 1 cut(s) 663
MboI GATC 3 cut(s) 304, 550, 982
MboII GAAGA 4 cut(s) 622, 623, 979, 1105
MflI RGATCY 1 cut(s) 304
MhlI GDGCHC 3 cut(s) 397, 599, 1131
MlsI TGGCCA 1 cut(s) 479
MluCI AATT 5 cut(s) 35, 136, 187, 202, 279
MluNI TGGCCA 1 cut(s) 479
MlyI GAGTC 1 cut(s) 1090
MmeI TCCRAC 3 cut(s) 741, 747, 1045
Mox20I TGGCCA 1 cut(s) 479
MscI TGGCCA 1 cut(s) 479
MseI TTAA 1 cut(s) 222
MslI CAYNNNNRTG 2 cut(s) 652, 954
Msp20I TGGCCA 1 cut(s) 479
MspA1I CMGCKG 3 cut(s) 80, 831, 1010
MspI CCGG 4 cut(s) 16, 32, 47, 351
MspR9I CCNGG 2 cut(s) 16, 481
MvaI CCWGG 1 cut(s) 481
MvnI CGCG 1 cut(s) 844
MwoI GCNNNNNNNGC 7 cut(s) 347, 356, 365, 374, 485, 1050, 1126
NciI CCSGG 1 cut(s) 16
NdeII GATC 3 cut(s) 304, 550, 982
NlaIII CATG 3 cut(s) 571, 908, 956
NlaIV GGNNCC 6 cut(s) 123, 306, 349, 376, 396, 1130
NmuCI GTSAC 2 cut(s) 685, 869
NruI TCGCGA 1 cut(s) 844
PaqCI CACCTGC 1 cut(s) 359
PfeI GAWTC 1 cut(s) 839
PkrI GCNGC 5 cut(s) 10, 52, 55, 79, 1012
PleI GAGTC 1 cut(s) 1090
PmaCI CACGTG 1 cut(s) 594
PmlI CACGTG 1 cut(s) 594
PpsI GAGTC 1 cut(s) 1090
Ppu21I YACGTR 1 cut(s) 594
PshBI ATTAAT 1 cut(s) 222
PsiI TTATAA 1 cut(s) 135
Psp6I CCWGG 1 cut(s) 479
PspCI CACGTG 1 cut(s) 594
PspGI CCWGG 1 cut(s) 479
PspN4I GGNNCC 6 cut(s) 123, 306, 349, 376, 396, 1130
PspPI GGNCC 5 cut(s) 111, 122, 339, 348, 375
PsuI RGATCY 1 cut(s) 304
PvuII CAGCTG 3 cut(s) 80, 831, 1010
RruI TCGCGA 1 cut(s) 844
RsaI GTAC 2 cut(s) 532, 1147
RsaNI GTAC 2 cut(s) 531, 1146
RseI CAYNNNNRTG 2 cut(s) 652, 954
SaqAI TTAA 1 cut(s) 222
SatI GCNGC 5 cut(s) 9, 51, 54, 78, 1011
Sau3AI GATC 3 cut(s) 304, 550, 982
Sau96I GGNCC 5 cut(s) 111, 122, 339, 348, 375
SchI GAGTC 1 cut(s) 1090
ScrFI CCNGG 2 cut(s) 16, 481
SduI GDGCHC 3 cut(s) 397, 599, 1131
SfaNI GCATC 5 cut(s) 64, 603, 846, 1031, 1092
SfcI CTRYAG 2 cut(s) 999, 1108
SfiI GGCCNNNNNGGCC 1 cut(s) 347
SinI GGWCC 2 cut(s) 111, 122
SmiMI CAYNNNNRTG 2 cut(s) 652, 954
SmlI CTYRAG 2 cut(s) 635, 1098
SmoI CTYRAG 2 cut(s) 635, 1098
Sse9I AATT 5 cut(s) 35, 136, 187, 202, 279
SsiI CCGC 8 cut(s) 8, 50, 53, 311, 548, 663, 690, 1090
SspI AATATT 1 cut(s) 130
SspMI CTAG 5 cut(s) 324, 678, 782, 995, 1137
StyD4I CCNGG 2 cut(s) 14, 479
StyI CCWWGG 1 cut(s) 107
TaaI ACNGT 3 cut(s) 748, 1003, 1049
TaiI ACGT 4 cut(s) 441, 596, 629, 823
TaqI TCGA 1 cut(s) 837
TasI AATT 5 cut(s) 35, 136, 187, 202, 279
TatI WGTACW 1 cut(s) 1145
TauI GCSGC 3 cut(s) 11, 53, 56
TfiI GAWTC 1 cut(s) 839
Tru1I TTAA 1 cut(s) 222
Tru9I TTAA 1 cut(s) 222
TscAI CASTG 6 cut(s) 450, 560, 866, 946, 980, 1008
TseFI GTSAC 2 cut(s) 685, 869
TseI GCWGC 2 cut(s) 77, 1010
Tsp45I GTSAC 2 cut(s) 685, 869
TspDTI ATGAA 2 cut(s) 763, 870
TspGWI ACGGA 3 cut(s) 548, 614, 888
TspRI CASTG 6 cut(s) 450, 560, 866, 946, 980, 1008
VneI GTGCAC 1 cut(s) 595
VpaK11BI GGWCC 2 cut(s) 111, 122
VspI ATTAAT 1 cut(s) 222
XagI CCTNNNNNAGG 2 cut(s) 312, 785
XapI RAATTY 1 cut(s) 35
XmiI GTMKAC 1 cut(s) 469
XspI CTAG 5 cut(s) 324, 678, 782, 995, 1137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.