pycom13g24950
ERF Family

DNA RNA polymerases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0000370
Physical Location & Seq
Forward (+)
21920961 .. 21923919
2959 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g24950.5

Sequence Viewer

Length: 2355 bp
ATGCCATGCGTATTGATTTATGCTTCGACTATGAATTTGTATGATATTTTTGTAGATTGTTTATTGTTAGTGCTCCCGCCCGTGATTAAGGCACAGTCCTTCATGTTATGTTCACCTCATGTACCATACGCTCATCTTGGATCCAAGTTAGGTGCACATTCCTGTCGCACATACCACTATAGGTGGTTCGGACTCGTAGGTGACCCGCGATTATTTGCATATCCTGTCGTACATACCACTTTAGGTGGTTCCGACTCATGTGCAGGTATATTTGTTGAGATATCATTTGCATTGATTTATATCACCTGGCTTACATATTTTTATGCTGAGATATTTAACATGAGATATGTATTCTATTTTTTGGGAAATTATACAGGTTTTACGGTGAGGGGTTACTATTCTTTGGTAATTGAAATGGTTTTGAAAAGCTTTGTTTTTGCCCACTCACACTTTCTGTTTTGCGCCTCTCCAGGTTCTACTCTGACAGATTATCACCATTGTAGGATTACCTTTGATGTTGTATATTTAGTATTTGTCCTTCATACTTATTTCGTCTTGCACCTTAACTTATCTAGTGCTCTAGTTAGTTTGGTTTTTAATTATTCGCATTTCTTATATTATTATTGCTTCCGCACTGTGCACATGGCTATGTCACCTTCACGTGATGGCCAGCACCCTAGGTTTGGTAGTCTTGCATATTTGGTGAATATTCTAATTATTTTGGTGTCTTTTGTCGGAACTATGCTGCCTCGTAAAGAGCCACGTTGTTCAGCTAAGCCTAGTTTCCTCGATATAACTCAGTTAAGGGAAGCTATAGCTCATGCGATTCAGTCTTCGCTTCGCCCTCTTCATAGGACTCCCTTGGAGACTATGTATAACTTAAAGTTGGATAAGTTTGAGGGTCATGAAGGGCATGAAGAGGCAGAGCAGTGGCTCGAGCATCTTGAAAAGACTTTCCGAGTAATGCAAAGTCAAGGGAATTTTCCTTCTGAAAGGTGGGTCGAGACGACTACGTGGTTCTTAGGTCAAGAACCAAGGAAATTGCTGACTGGGAAGTGTTTAAACGGTTGTTTTAGAAAAAGGTTTATTCCCCCTGAGTATATTGATCACAAGAAGCAAGAATTTACTCAATTAAGACAAGGGAAGATGACGGCGAATGAGTATTATAGGAGATTCACTAACTTGTCTCGTTATTATCCGGATGTTGCTACTAATCCGGTTGAGATGCTCTGTCATTTTAGATTGGGTACTAAGAATAAGTGGAGTTCTATGAGATTTTGTTTAGGATTGAGGATTCAGAGAATATGCCTAGTGAAAGTGAGGAAGAAGAAAAGGACGGCAATCAGAAGAAAGATGATAAAGGTAAAGGTCAAGCATCTTAGGGACCTCGCAAGACTCAGAGCTTTAAGTGAAGTGGAGCTAGTTCCAGTTCTTCCAGCAGGGGTTTTAGTGCCACTGACCAGAGAAGAGGTGGTACATTTTCCGGGGGTCCTAGATTCTAGAGATAAGGGGATGCTAGCAGAGGAAGTGCTCTGTTGTGCCACAGATGTAACAATAGACGTTTTGGAGAGTGTAGGCGACGCCGCAGTGGATATTTTACTTGTGGCAAAGGCCCCATTAGCCTTCCTTACCACCACCAACGTCGATCCAGCAAGTTCTAAGGTTTGGTTGTTATGGTCAGATGGGTTGTGGTGGTGCTTACCATTATCAGGGATCCTTATTATCAGAGTGGGTATCGTCAGTATTCTGGAGGTTATATGCCGTATCCTCCCATTCCAGCTGGTGGATCTCAGTGGTATCAGTAAGGATAGCCCCAGTAAGGAGAGATTTCAAGGCCGTGGTGTGCAGGGGCGAAATAATCAAGTTAATAGTGGTCGTGGGGGACGACAACAATCCCAGGGACGTGTTAACAATATCTCTCTGCAAGATGCGGAGAATCATCCGGACTTGATCGATGGTGATTGTGGTGCTACGCATTTTGTCATTTCTCATACATTTGCACAAGTGACGCAACCTCATCCTACACCTCTAGGGTATGATTTAGAGTTTGCTATGCCTAGAGTGGAGATATGTTATGTTGATTGTGTATATCCAGGATGTCCAGTGATGGTGGAGGATATAGTTATGCTAGCTAACCTTATCCTGTTAGATATTGTTGATTTTGATGTGATTTTGGGCACATATTGGTTGCATTATAATCATGCCAATACAGATTGCTACGGGAAAATAGTTACTTTCCATCATCCTGGATTACCTGTGGTTACTTTTGTGGGTGAGCAGAGTGGGGTGAGGCATGGCGTTATTTTTGCTGTGAAAGTAAAAAGGTTATTATCAAAAGGTTGCCAGGGATATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVP_2 RVT_1 Retrotrans_gag rve zf-CCHC

Protein Analysis

785

Amino Acids

89.31

Weight (kDa)

8.74

Isoelectric Point (pI)

41.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000370)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29481 FvH4_2g11454 FvH4_3g19661 FvH4_3g28463 FvH4_3g31691 FvH4_3g34551 FvH4_3g35241 FvH4_4g06575 FvH4_4g09082 FvH4_4g15804 FvH4_4g15805 FvH4_4g16178 FvH4_4g16282 FvH4_5g25163 FvH4_6g27413 FvH4_7g02962 FvH4_7g04361
malus_domestica MD01G1095000.v1.1 MD02G1270200.v1.1 MD02G1270300.v1.1 MD02G1270400.v1.1 MD06G1059100.v1.1 MD08G1226500.v1.1
prunus_persica Prupe.1G169500_v2.0.a1 Prupe.5G195800_v2.0.a1
pyrus_communis pycom01g00010 pycom01g00770 pycom02g23140 pycom03g11760 pycom04g06090 pycom05g06900 pycom05g08070 pycom05g14500 pycom06g03050 pycom07g06250 pycom07g07540 pycom07g10580 pycom08g04990 pycom1146g00060 pycom11g01080 pycom11g15270 pycom11g15460 pycom11g24900 pycom12419g00150 pycom12424g00120 pycom13g08740 pycom13g24950 pycom13g25960 pycom13g26030 pycom13g27820 pycom16g23270 pycom16g25020 pycom16g25960 pycom17g07780 pycom17g08210 pycom17g13100
rosa_chinensis RchiOBHm_Chr1g0329421 RchiOBHm_Chr4g0397711 RchiOBHm_Chr4g0403481 RchiOBHm_Chr5g0019091 RchiOBHm_Chr5g0049101
rosa_laevigata RLG00000029892
rosa_multiflora Rmu_sc0001866.1_g000007
rosa_roxburghii Rroxscaffold_2G00094160 Rroxscaffold_3G00229110 Rroxscaffold_4G00321100 Rroxscaffold_7G00196040 Rroxscaffold_7G00196280
rosa_rugosa Rorug05G0160500 Rorug06G0096500
rosa_samantha Rh1AG098600 Rh1AG098800 Rh1BG078200 Rh1BG078700 Rh1BG178500 Rh1CG094600 Rh1CG094900 Rh1DG101700 Rh1DG109600 Rh2AG175800 Rh2AG175900 Rh2AG511400 Rh2BG114700 Rh2CG042200 Rh2CG116600 Rh2CG317500 Rh2DG327700 Rh2DG337800 Rh4CG142700 Rh4DG113100 Rh5BG335800 Rh5CG360600 Rh5DG352000 Rh6BG071400 Rh6BG417100 Rh6CG463300 Rh6CG463400 Rh7BG186600 Rh7CG196500 Rh7CG196600 Rh7CG448900 Rh7DG228300
rosa_wichuraiana Rw4G006560 Rw4G017340 Rw5G030450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2196
Acc36I ACCTGC 1 cut(s) 254
AccB7I CCANNNNNTGG 1 cut(s) 1783
AccII CGCG 1 cut(s) 208
AccIII TCCGGA 2 cut(s) 1198, 1942
AciI CCGC 5 cut(s) 77, 206, 631, 1584, 1931
AclWI GGATC 6 cut(s) 135, 148, 1640, 1708, 1721, 1794
AcoI YGGCCR 1 cut(s) 667
AcsI RAATTY 3 cut(s) 34, 979, 1121
AcvI CACGTG 1 cut(s) 662
AcyI GRCGYC 1 cut(s) 1581
AfaI GTAC 4 cut(s) 123, 231, 1249, 1476
AfiI CCNNNNNNNGG 4 cut(s) 683, 1709, 1783, 1819
AflIII ACRYGT 1 cut(s) 1903
AgsI TTSAA 4 cut(s) 413, 424, 947, 1832
AjiI CACGTC 1 cut(s) 1904
AjnI CCWGG 6 cut(s) 305, 469, 1896, 2092, 2245, 2343
AluBI AGCT 8 cut(s) 429, 773, 812, 818, 1403, 1420, 1780, 2132
AluI AGCT 8 cut(s) 429, 773, 812, 818, 1403, 1420, 1780, 2132
Alw21I GWGCWC 5 cut(s) 75, 157, 580, 642, 1533
Alw26I GTCTC 3 cut(s) 860, 998, 1191
Alw44I GTGCAC 2 cut(s) 153, 638
AlwI GGATC 6 cut(s) 135, 148, 1640, 1708, 1721, 1794
Ama87I CYCGRG 1 cut(s) 935
Aor13HI TCCGGA 2 cut(s) 1198, 1942
AoxI GGCC 3 cut(s) 667, 1611, 1834
ApaLI GTGCAC 2 cut(s) 153, 638
ApeKI GCWGC 1 cut(s) 745
ApoI RAATTY 3 cut(s) 34, 979, 1121
ArsI GACNNNNNNTTYG 2 cut(s) 19, 51
AspA2I CCTAGG 1 cut(s) 677
AspLEI GCGC 1 cut(s) 464
AspS9I GGNCC 3 cut(s) 1384, 1489, 1612
AsuC2I CCSGG 1 cut(s) 1485
AsuNHI GCTAGC 2 cut(s) 1516, 2128
AvaI CYCGRG 1 cut(s) 935
AvaII GGWCC 2 cut(s) 1384, 1489
AvrII CCTAGG 1 cut(s) 677
BaeGI GKGCMC 3 cut(s) 157, 642, 2180
BalI TGGCCA 1 cut(s) 669
BamHI GGATCC 2 cut(s) 140, 1713
BarI GAAGNNNNNNTAC 4 cut(s) 522, 554, 1458, 1490
BbrPI CACGTG 1 cut(s) 662
BbsI GAAGAC 1 cut(s) 825
Bbv12I GWGCWC 5 cut(s) 75, 157, 580, 642, 1533
BbvI GCAGC 1 cut(s) 732
BccI CCATC 5 cut(s) 659, 1676, 1949, 2101, 2247
BceAI ACGGC 4 cut(s) 1167, 1353, 1746, 1821
BcgI CGANNNNNNTGC 2 cut(s) 242, 276
BciT130I CCWGG 6 cut(s) 307, 471, 1898, 2094, 2247, 2345
BciVI GTATCC 1 cut(s) 1775
BclI TGATCA 1 cut(s) 1105
BcnI CCSGG 1 cut(s) 1485
BcoDI GTCTC 3 cut(s) 860, 998, 1191
BfmI CTRYAG 2 cut(s) 178, 813
BfuAI ACCTGC 1 cut(s) 254
BfuI GTATCC 1 cut(s) 1775
BisI GCNGC 2 cut(s) 746, 1584
BlnI CCTAGG 1 cut(s) 677
BlpI GCTNAGC 1 cut(s) 774
BlsI GCNGC 2 cut(s) 747, 1585
Bme1390I CCNGG 7 cut(s) 307, 471, 1485, 1898, 2094, 2247, 2345
Bme18I GGWCC 2 cut(s) 1384, 1489
BmeT110I CYCGRG 1 cut(s) 935
BmgBI CACGTC 1 cut(s) 1904
BmgT120I GGNCC 3 cut(s) 1384, 1489, 1612
BmiI GGNNCC 6 cut(s) 142, 250, 1385, 1490, 1614, 1715
BmrFI CCNGG 7 cut(s) 307, 471, 1485, 1898, 2094, 2247, 2345
BmrI ACTGGG 2 cut(s) 1059, 1809
BmsI GCATC 5 cut(s) 949, 1215, 1384, 1503, 1918
BmtI GCTAGC 2 cut(s) 1520, 2132
BmuI ACTGGG 2 cut(s) 1059, 1809
BpiI GAAGAC 1 cut(s) 825
BpmI CTGGAG 2 cut(s) 453, 1769
Bpu1102I GCTNAGC 1 cut(s) 774
BpuMI CCSGG 1 cut(s) 1485
Bsa29I ATCGAT 1 cut(s) 1953
BsaAI YACGTR 2 cut(s) 662, 1014
BsaBI GATNNNNATC 1 cut(s) 299
BsaHI GRCGYC 1 cut(s) 1581
BsaJI CCNNGG 8 cut(s) 677, 861, 1034, 1484, 1837, 1896, 1897, 2344
BsaWI WCCGGW 3 cut(s) 1198, 1216, 1942
BsaXI ACNNNNNCTCC 2 cut(s) 857, 887
Bsc4I CCNNNNNNNGG 4 cut(s) 683, 1709, 1783, 1819
Bse1I ACTGG 4 cut(s) 1054, 1427, 1815, 2102
Bse8I GATNNNNATC 1 cut(s) 299
BseAI TCCGGA 2 cut(s) 1198, 1942
BseBI CCWGG 6 cut(s) 307, 471, 1898, 2094, 2247, 2345
BseCI ATCGAT 1 cut(s) 1953
BseDI CCNNGG 8 cut(s) 677, 861, 1034, 1484, 1837, 1896, 1897, 2344
BseGI GGATG 6 cut(s) 1207, 1518, 1939, 2017, 2102, 2242
BseJI GATNNNNATC 1 cut(s) 299
BseLI CCNNNNNNNGG 4 cut(s) 683, 1709, 1783, 1819
BseMII CTCAG 5 cut(s) 318, 812, 1086, 1411, 1804
BseNI ACTGG 4 cut(s) 1054, 1427, 1815, 2102
BseSI GKGCMC 3 cut(s) 157, 642, 2180
BseXI GCAGC 1 cut(s) 732
BsgI GTGCAG 2 cut(s) 282, 1865
Bsh1236I CGCG 1 cut(s) 208
BshFI GGCC 3 cut(s) 669, 1613, 1836
BshVI ATCGAT 1 cut(s) 1953
BsiHKAI GWGCWC 5 cut(s) 75, 157, 580, 642, 1533
BsiHKCI CYCGRG 1 cut(s) 935
BsiSI CCGG 4 cut(s) 1199, 1217, 1484, 1943
BslFI GGGAC 3 cut(s) 1397, 1896, 1914
BslI CCNNNNNNNGG 4 cut(s) 683, 1709, 1783, 1819
BsmAI GTCTC 3 cut(s) 860, 998, 1191
BsmBI CGTCTC 1 cut(s) 998
BsmFI GGGAC 3 cut(s) 1397, 1896, 1914
BsnI GGCC 3 cut(s) 669, 1613, 1836
BsoBI CYCGRG 1 cut(s) 935
Bsp1286I GDGCHC 6 cut(s) 75, 157, 580, 642, 1533, 2180
Bsp13I TCCGGA 2 cut(s) 1198, 1942
Bsp143I GATC 6 cut(s) 140, 1105, 1645, 1713, 1786, 1950
Bsp1720I GCTNAGC 1 cut(s) 774
BspACI CCGC 5 cut(s) 77, 206, 631, 1584, 1931
BspANI GGCC 3 cut(s) 669, 1613, 1836
BspCNI CTCAG 5 cut(s) 319, 811, 1087, 1410, 1803
BspDI ATCGAT 1 cut(s) 1953
BspEI TCCGGA 2 cut(s) 1198, 1942
BspFNI CGCG 1 cut(s) 208
BspHI TCATGA 1 cut(s) 904
BspLI GGNNCC 6 cut(s) 142, 250, 1385, 1490, 1614, 1715
BspMI ACCTGC 1 cut(s) 254
BspOI GCTAGC 2 cut(s) 1520, 2132
BspPI GGATC 6 cut(s) 135, 148, 1640, 1708, 1721, 1794
BsrI ACTGG 4 cut(s) 1054, 1427, 1815, 2102
BssECI CCNNGG 8 cut(s) 677, 861, 1034, 1484, 1837, 1896, 1897, 2344
BssMI GATC 6 cut(s) 140, 1105, 1645, 1713, 1786, 1950
BssNI GRCGYC 1 cut(s) 1581
BssT1I CCWWGG 3 cut(s) 677, 861, 1034
Bst2UI CCWGG 6 cut(s) 307, 471, 1898, 2094, 2247, 2345
Bst4CI ACNGT 4 cut(s) 96, 385, 637, 1067
Bst6I CTCTTC 3 cut(s) 852, 912, 1461
BstACI GRCGYC 1 cut(s) 1581
BstBAI YACGTR 2 cut(s) 662, 1014
BstC8I GCNNGC 3 cut(s) 671, 1518, 2130
BstDSI CCRYGG 1 cut(s) 1837
BstEII GGTNACC 1 cut(s) 200
BstF5I GGATG 6 cut(s) 1207, 1518, 1939, 2017, 2102, 2242
BstFNI CGCG 1 cut(s) 208
BstHHI GCGC 1 cut(s) 464
BstKTI GATC 6 cut(s) 143, 1108, 1648, 1716, 1789, 1953
BstMAI GTCTC 3 cut(s) 860, 998, 1191
BstMBI GATC 6 cut(s) 140, 1105, 1645, 1713, 1786, 1950
BstMWI GCNNNNNNNGC 1 cut(s) 1619
BstNI CCWGG 6 cut(s) 307, 471, 1898, 2094, 2247, 2345
BstPI GGTNACC 1 cut(s) 200
BstSCI CCNGG 7 cut(s) 305, 469, 1483, 1896, 2092, 2245, 2343
BstSFI CTRYAG 2 cut(s) 178, 813
BstSLI GKGCMC 3 cut(s) 157, 642, 2180
BstUI CGCG 1 cut(s) 208
BstV1I GCAGC 1 cut(s) 732
BstV2I GAAGAC 1 cut(s) 825
BstX2I RGATCY 3 cut(s) 140, 1713, 1786
BstXI CCANNNNNNTGG 1 cut(s) 2246
BstYI RGATCY 3 cut(s) 140, 1713, 1786
Bsu15I ATCGAT 1 cut(s) 1953
BsuI GTATCC 1 cut(s) 1775
BsuRI GGCC 3 cut(s) 669, 1613, 1836
BsuTUI ATCGAT 1 cut(s) 1953
BtgI CCRYGG 1 cut(s) 1837
BtrI CACGTC 1 cut(s) 1904
BtsCI GGATG 6 cut(s) 1207, 1518, 1939, 2017, 2102, 2242
BtsI GCAGTG 2 cut(s) 935, 1593
BtsIMutI CAGTG 6 cut(s) 633, 935, 1454, 1593, 1798, 2109
BveI ACCTGC 1 cut(s) 254
Cac8I GCNNGC 3 cut(s) 671, 1518, 2130
CciI TCATGA 1 cut(s) 904
CfoI GCGC 1 cut(s) 464
Cfr13I GGNCC 3 cut(s) 1384, 1489, 1612
ClaI ATCGAT 1 cut(s) 1953
CseI GACGC 2 cut(s) 1589, 2017
Csp6I GTAC 4 cut(s) 122, 230, 1248, 1475
CviQI GTAC 4 cut(s) 122, 230, 1248, 1475
DpnI GATC 6 cut(s) 142, 1107, 1647, 1715, 1788, 1952
DpnII GATC 6 cut(s) 140, 1105, 1645, 1713, 1786, 1950
DraI TTTAAA 1 cut(s) 1062
EaeI YGGCCR 1 cut(s) 667
Eam1104I CTCTTC 3 cut(s) 852, 912, 1461
EarI CTCTTC 3 cut(s) 852, 912, 1461
Eco130I CCWWGG 3 cut(s) 677, 861, 1034
Eco32I GATATC 1 cut(s) 282
Eco47I GGWCC 2 cut(s) 1384, 1489
Eco72I CACGTG 1 cut(s) 662
Eco88I CYCGRG 1 cut(s) 935
Eco91I GGTNACC 1 cut(s) 200
EcoO109I RGGNCCY 3 cut(s) 1384, 1489, 1612
EcoO65I GGTNACC 1 cut(s) 200
EcoRII CCWGG 6 cut(s) 305, 469, 1896, 2092, 2245, 2343
EcoRV GATATC 1 cut(s) 282
EcoT14I CCWWGG 3 cut(s) 677, 861, 1034
ErhI CCWWGG 3 cut(s) 677, 861, 1034
Esp3I CGTCTC 1 cut(s) 998
FaqI GGGAC 3 cut(s) 1397, 1896, 1914
FauI CCCGC 2 cut(s) 84, 213
FbaI TGATCA 1 cut(s) 1105
Fnu4HI GCNGC 2 cut(s) 746, 1584
FokI GGATG 6 cut(s) 1214, 1525, 1926, 2004, 2109, 2229
Fsp4HI GCNGC 2 cut(s) 746, 1584
GlaI GCGC 1 cut(s) 463
GluI GCNGC 2 cut(s) 746, 1584
GsuI CTGGAG 2 cut(s) 453, 1769
HaeIII GGCC 3 cut(s) 669, 1613, 1836
HapII CCGG 4 cut(s) 1199, 1217, 1484, 1943
HgaI GACGC 2 cut(s) 1589, 2017
HhaI GCGC 1 cut(s) 464
Hin1I GRCGYC 1 cut(s) 1581
Hin6I GCGC 1 cut(s) 462
HinP1I GCGC 1 cut(s) 462
HincII GTYRAC 1 cut(s) 1909
HindII GTYRAC 1 cut(s) 1909
HindIII AAGCTT 1 cut(s) 427
HinfI GANTC 9 cut(s) 192, 254, 826, 856, 1173, 1294, 1395, 1496, 1936
HpaI GTTAAC 1 cut(s) 1909
HpaII CCGG 4 cut(s) 1199, 1217, 1484, 1943
Hpy166II GTNNAC 4 cut(s) 113, 155, 640, 1909
Hpy188III TCNNGA 8 cut(s) 905, 944, 1003, 1028, 1199, 1500, 1748, 1943
Hpy8I GTNNAC 4 cut(s) 113, 155, 640, 1909
Hpy99I CGWCG 2 cut(s) 1583, 1646
HpyAV CCTTC 6 cut(s) 109, 548, 666, 902, 996, 1633
HpyCH4III ACNGT 4 cut(s) 96, 385, 637, 1067
HpyCH4IV ACGT 6 cut(s) 661, 763, 1013, 1560, 1641, 1903
HpyF10VI GCNNNNNNNGC 1 cut(s) 1619
HpySE526I ACGT 6 cut(s) 661, 763, 1013, 1560, 1641, 1903
Hsp92I GRCGYC 1 cut(s) 1581
HspAI GCGC 1 cut(s) 462
Kpn2I TCCGGA 2 cut(s) 1198, 1942
Ksp22I TGATCA 1 cut(s) 1105
KspAI GTTAAC 1 cut(s) 1909
Kzo9I GATC 6 cut(s) 140, 1105, 1645, 1713, 1786, 1950
LmnI GCTCC 2 cut(s) 78, 1417
Lsp1109I GCAGC 1 cut(s) 732
LweI GCATC 5 cut(s) 949, 1215, 1384, 1503, 1918
MaeII ACGT 6 cut(s) 661, 763, 1013, 1560, 1641, 1903
MaeIII GTNAC 7 cut(s) 200, 392, 651, 1549, 2005, 2230, 2260
MalI GATC 6 cut(s) 142, 1107, 1647, 1715, 1788, 1952
MboI GATC 6 cut(s) 140, 1105, 1645, 1713, 1786, 1950
MboII GAAGA 9 cut(s) 825, 839, 929, 1156, 1336, 1339, 1359, 1424, 1478
MflI RGATCY 3 cut(s) 140, 1713, 1786
MhlI GDGCHC 6 cut(s) 75, 157, 580, 642, 1533, 2180
MlsI TGGCCA 1 cut(s) 669
MluCI AATT 9 cut(s) 34, 367, 408, 598, 714, 979, 1040, 1121, 1130
MluNI TGGCCA 1 cut(s) 669
MlyI GAGTC 4 cut(s) 186, 248, 850, 1389
MmeI TCCRAC 3 cut(s) 276, 715, 867
Mox20I TGGCCA 1 cut(s) 669
MroI TCCGGA 2 cut(s) 1198, 1942
MscI TGGCCA 1 cut(s) 669
MslI CAYNNNNRTG 1 cut(s) 647
Msp20I TGGCCA 1 cut(s) 669
MspA1I CMGCKG 1 cut(s) 1780
MspI CCGG 4 cut(s) 1199, 1217, 1484, 1943
MspR9I CCNGG 7 cut(s) 307, 471, 1485, 1898, 2094, 2247, 2345
MssI GTTTAAAC 1 cut(s) 1062
MvaI CCWGG 6 cut(s) 307, 471, 1898, 2094, 2247, 2345
MvnI CGCG 1 cut(s) 208
MwoI GCNNNNNNNGC 1 cut(s) 1619
NciI CCSGG 1 cut(s) 1485
NdeII GATC 6 cut(s) 140, 1105, 1645, 1713, 1786, 1950
NheI GCTAGC 2 cut(s) 1516, 2128
NlaIV GGNNCC 6 cut(s) 142, 250, 1385, 1490, 1614, 1715
NmuCI GTSAC 3 cut(s) 200, 651, 2005
PaeR7I CTCGAG 1 cut(s) 935
PagI TCATGA 1 cut(s) 904
PasI CCCWGGG 1 cut(s) 1897
PcsI WCGNNNNNNNCGW 1 cut(s) 1882
PfeI GAWTC 5 cut(s) 826, 1173, 1294, 1496, 1936
PflMI CCANNNNNTGG 1 cut(s) 1783
PfoI TCCNGGA 2 cut(s) 2092, 2245
PkrI GCNGC 2 cut(s) 747, 1585
PleI GAGTC 4 cut(s) 186, 248, 850, 1389
PmaCI CACGTG 1 cut(s) 662
PmeI GTTTAAAC 1 cut(s) 1062
PmlI CACGTG 1 cut(s) 662
PpsI GAGTC 4 cut(s) 186, 248, 850, 1389
Ppu21I YACGTR 2 cut(s) 662, 1014
PpuMI RGGWCCY 2 cut(s) 1384, 1489
PsiI TTATAA 1 cut(s) 2196
Psp5II RGGWCCY 2 cut(s) 1384, 1489
Psp6I CCWGG 6 cut(s) 305, 469, 1896, 2092, 2245, 2343
PspCI CACGTG 1 cut(s) 662
PspEI GGTNACC 1 cut(s) 200
PspGI CCWGG 6 cut(s) 305, 469, 1896, 2092, 2245, 2343
PspN4I GGNNCC 6 cut(s) 142, 250, 1385, 1490, 1614, 1715
PspPI GGNCC 3 cut(s) 1384, 1489, 1612
PspPPI RGGWCCY 2 cut(s) 1384, 1489
PspXI VCTCGAGB 1 cut(s) 935
PsuI RGATCY 3 cut(s) 140, 1713, 1786
PvuII CAGCTG 1 cut(s) 1780
RsaI GTAC 4 cut(s) 123, 231, 1249, 1476
RsaNI GTAC 4 cut(s) 122, 230, 1248, 1475
RseI CAYNNNNRTG 1 cut(s) 647
SatI GCNGC 2 cut(s) 746, 1584
Sau3AI GATC 6 cut(s) 140, 1105, 1645, 1713, 1786, 1950
Sau96I GGNCC 3 cut(s) 1384, 1489, 1612
SchI GAGTC 4 cut(s) 186, 248, 850, 1389
ScrFI CCNGG 7 cut(s) 307, 471, 1485, 1898, 2094, 2247, 2345
SduI GDGCHC 6 cut(s) 75, 157, 580, 642, 1533, 2180
SfaNI GCATC 5 cut(s) 949, 1215, 1384, 1503, 1918
SfcI CTRYAG 2 cut(s) 178, 813
Sfr274I CTCGAG 1 cut(s) 935
SinI GGWCC 2 cut(s) 1384, 1489
SlaI CTCGAG 1 cut(s) 935
SmiMI CAYNNNNRTG 1 cut(s) 647
SmlI CTYRAG 1 cut(s) 935
SmoI CTYRAG 1 cut(s) 935
Sse9I AATT 9 cut(s) 34, 367, 408, 598, 714, 979, 1040, 1121, 1130
SsiI CCGC 5 cut(s) 77, 206, 631, 1584, 1931
SspI AATATT 1 cut(s) 709
StyD4I CCNGG 7 cut(s) 305, 469, 1483, 1896, 2092, 2245, 2343
StyI CCWWGG 3 cut(s) 677, 861, 1034
TaaI ACNGT 4 cut(s) 96, 385, 637, 1067
TaiI ACGT 6 cut(s) 664, 766, 1016, 1563, 1644, 1906
TaqI TCGA 6 cut(s) 26, 789, 936, 1002, 1644, 1953
TasI AATT 9 cut(s) 34, 367, 408, 598, 714, 979, 1040, 1121, 1130
TauI GCSGC 1 cut(s) 1586
TfiI GAWTC 5 cut(s) 826, 1173, 1294, 1496, 1936
TscAI CASTG 6 cut(s) 640, 935, 1461, 1593, 1798, 2109
TseFI GTSAC 3 cut(s) 200, 651, 2005
TseI GCWGC 1 cut(s) 745
Tsp45I GTSAC 3 cut(s) 200, 651, 2005
TspDTI ATGAA 6 cut(s) 47, 91, 530, 839, 921, 930
TspRI CASTG 6 cut(s) 640, 935, 1461, 1593, 1798, 2109
Van91I CCANNNNNTGG 1 cut(s) 1783
VneI GTGCAC 2 cut(s) 153, 638
VpaK11BI GGWCC 2 cut(s) 1384, 1489
XapI RAATTY 3 cut(s) 34, 979, 1121
XbaI TCTAGA 1 cut(s) 1499
XcmI CCANNNNNNNNNTGG 1 cut(s) 1468
XhoI CTCGAG 1 cut(s) 935
XmaJI CCTAGG 1 cut(s) 677
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.