No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotrans_gag | PF03732 | 32 - 108 | 4.2e-10 | Retrotransposon gag protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 323 |
| AccBSI | CCGCTC | 1 cut(s) | 58 |
| AciI | CCGC | 4 cut(s) | 53, 58, 184, 296 |
| AcsI | RAATTY | 2 cut(s) | 197, 418 |
| AfaI | GTAC | 1 cut(s) | 239 |
| AgsI | TTSAA | 1 cut(s) | 13 |
| AjnI | CCWGG | 1 cut(s) | 375 |
| AluBI | AGCT | 2 cut(s) | 113, 223 |
| AluI | AGCT | 2 cut(s) | 113, 223 |
| Alw26I | GTCTC | 2 cut(s) | 205, 267 |
| ApoI | RAATTY | 2 cut(s) | 197, 418 |
| AsuII | TTCGAA | 1 cut(s) | 27 |
| BanI | GGYRCC | 1 cut(s) | 323 |
| BbsI | GAAGAC | 2 cut(s) | 86, 125 |
| BccI | CCATC | 1 cut(s) | 340 |
| BciT130I | CCWGG | 1 cut(s) | 377 |
| BcoDI | GTCTC | 2 cut(s) | 205, 267 |
| BfaI | CTAG | 3 cut(s) | 65, 275, 460 |
| BmcAI | AGTACT | 1 cut(s) | 239 |
| Bme1390I | CCNGG | 1 cut(s) | 377 |
| BmiI | GGNNCC | 1 cut(s) | 325 |
| BmrFI | CCNGG | 1 cut(s) | 377 |
| BmsI | GCATC | 1 cut(s) | 291 |
| BpiI | GAAGAC | 2 cut(s) | 86, 125 |
| BpmI | CTGGAG | 2 cut(s) | 93, 265 |
| Bpu14I | TTCGAA | 1 cut(s) | 27 |
| Bse1I | ACTGG | 1 cut(s) | 248 |
| BseBI | CCWGG | 1 cut(s) | 377 |
| BseGI | GGATG | 2 cut(s) | 136, 445 |
| BseMII | CTCAG | 3 cut(s) | 105, 162, 195 |
| BseNI | ACTGG | 1 cut(s) | 248 |
| BshNI | GGYRCC | 1 cut(s) | 323 |
| BsmAI | GTCTC | 2 cut(s) | 205, 267 |
| BsmI | GAATGC | 1 cut(s) | 340 |
| Bsp119I | TTCGAA | 1 cut(s) | 27 |
| BspACI | CCGC | 4 cut(s) | 53, 58, 184, 296 |
| BspCNI | CTCAG | 3 cut(s) | 106, 163, 196 |
| BspLI | GGNNCC | 1 cut(s) | 325 |
| BspT104I | TTCGAA | 1 cut(s) | 27 |
| BspT107I | GGYRCC | 1 cut(s) | 323 |
| BsrBI | CCGCTC | 1 cut(s) | 58 |
| BsrI | ACTGG | 1 cut(s) | 248 |
| Bst2UI | CCWGG | 1 cut(s) | 377 |
| Bst4CI | ACNGT | 1 cut(s) | 455 |
| Bst6I | CTCTTC | 1 cut(s) | 438 |
| BstBI | TTCGAA | 1 cut(s) | 27 |
| BstC8I | GCNNGC | 1 cut(s) | 286 |
| BstDEI | CTNAG | 3 cut(s) | 114, 171, 204 |
| BstF5I | GGATG | 2 cut(s) | 136, 445 |
| BstMAI | GTCTC | 2 cut(s) | 205, 267 |
| BstNI | CCWGG | 1 cut(s) | 377 |
| BstSCI | CCNGG | 1 cut(s) | 375 |
| BstV2I | GAAGAC | 2 cut(s) | 86, 125 |
| BtsCI | GGATG | 2 cut(s) | 136, 445 |
| BtsIMutI | CAGTG | 1 cut(s) | 201 |
| Cac8I | GCNNGC | 1 cut(s) | 286 |
| Csp6I | GTAC | 1 cut(s) | 238 |
| CviJI | RGCY | 3 cut(s) | 64, 113, 223 |
| CviKI_1 | RGCY | 3 cut(s) | 64, 113, 223 |
| CviQI | GTAC | 1 cut(s) | 238 |
| DdeI | CTNAG | 3 cut(s) | 114, 171, 204 |
| Eam1104I | CTCTTC | 1 cut(s) | 438 |
| EarI | CTCTTC | 1 cut(s) | 438 |
| EcoRI | GAATTC | 1 cut(s) | 197 |
| EcoRII | CCWGG | 1 cut(s) | 375 |
| FaiI | YATR | 4 cut(s) | 6, 72, 177, 387 |
| FokI | GGATG | 2 cut(s) | 143, 452 |
| FspBI | CTAG | 3 cut(s) | 65, 275, 460 |
| GsuI | CTGGAG | 2 cut(s) | 93, 265 |
| HinfI | GANTC | 3 cut(s) | 106, 391, 410 |
| Hpy166II | GTNNAC | 2 cut(s) | 92, 252 |
| Hpy188I | TCNGA | 1 cut(s) | 415 |
| Hpy188III | TCNNGA | 4 cut(s) | 89, 151, 170, 275 |
| Hpy8I | GTNNAC | 2 cut(s) | 92, 252 |
| Hpy99I | CGWCG | 2 cut(s) | 102, 312 |
| HpyAV | CCTTC | 2 cut(s) | 23, 150 |
| HpyCH4III | ACNGT | 1 cut(s) | 455 |
| HpyF3I | CTNAG | 3 cut(s) | 114, 171, 204 |
| LmnI | GCTCC | 1 cut(s) | 55 |
| LpnPI | CCDG | 9 cut(s) | 123, 136, 183, 200, 229, 270, 306, 362, 389 |
| LweI | GCATC | 1 cut(s) | 291 |
| MaeI | CTAG | 3 cut(s) | 65, 275, 460 |
| MaeIII | GTNAC | 2 cut(s) | 365, 455 |
| MbiI | CCGCTC | 1 cut(s) | 58 |
| MboII | GAAGA | 4 cut(s) | 91, 130, 343, 455 |
| MluCI | AATT | 4 cut(s) | 7, 197, 402, 418 |
| MlyI | GAGTC | 1 cut(s) | 100 |
| MnlI | CCTC | 6 cut(s) | 31, 40, 177, 240, 400, 430 |
| MslI | CAYNNNNRTG | 1 cut(s) | 276 |
| MspA1I | CMGCKG | 2 cut(s) | 113, 296 |
| MspR9I | CCNGG | 1 cut(s) | 377 |
| Mva1269I | GAATGC | 1 cut(s) | 340 |
| MvaI | CCWGG | 1 cut(s) | 377 |
| NlaIV | GGNNCC | 1 cut(s) | 325 |
| NmeAIII | GCCGAG | 1 cut(s) | 450 |
| NmuCI | GTSAC | 1 cut(s) | 365 |
| NspV | TTCGAA | 1 cut(s) | 27 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 33, 94, 313 |
| PctI | GAATGC | 1 cut(s) | 340 |
| PfeI | GAWTC | 2 cut(s) | 391, 410 |
| PleI | GAGTC | 1 cut(s) | 100 |
| PpsI | GAGTC | 1 cut(s) | 100 |
| Psp6I | CCWGG | 1 cut(s) | 375 |
| PspGI | CCWGG | 1 cut(s) | 375 |
| PspN4I | GGNNCC | 1 cut(s) | 325 |
| PvuII | CAGCTG | 1 cut(s) | 113 |
| RsaI | GTAC | 1 cut(s) | 239 |
| RsaNI | GTAC | 1 cut(s) | 238 |
| RseI | CAYNNNNRTG | 1 cut(s) | 276 |
| ScaI | AGTACT | 1 cut(s) | 239 |
| SchI | GAGTC | 1 cut(s) | 100 |
| ScrFI | CCNGG | 1 cut(s) | 377 |
| SetI | ASST | 6 cut(s) | 86, 115, 161, 225, 251, 374 |
| SfaNI | GCATC | 1 cut(s) | 291 |
| SfuI | TTCGAA | 1 cut(s) | 27 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 276 |
| Sse9I | AATT | 4 cut(s) | 7, 197, 402, 418 |
| SsiI | CCGC | 4 cut(s) | 53, 58, 184, 296 |
| SspMI | CTAG | 3 cut(s) | 65, 275, 460 |
| StyD4I | CCNGG | 1 cut(s) | 375 |
| TaaI | ACNGT | 1 cut(s) | 455 |
| TaqI | TCGA | 2 cut(s) | 27, 344 |
| TasI | AATT | 4 cut(s) | 7, 197, 402, 418 |
| TatI | WGTACW | 1 cut(s) | 237 |
| TfiI | GAWTC | 2 cut(s) | 391, 410 |
| TscAI | CASTG | 1 cut(s) | 208 |
| TseFI | GTSAC | 1 cut(s) | 365 |
| Tsp45I | GTSAC | 1 cut(s) | 365 |
| TspDTI | ATGAA | 1 cut(s) | 456 |
| TspGWI | ACGGA | 1 cut(s) | 305 |
| TspRI | CASTG | 1 cut(s) | 208 |
| XapI | RAATTY | 2 cut(s) | 197, 418 |
| XbaI | TCTAGA | 1 cut(s) | 274 |
| XspI | CTAG | 3 cut(s) | 65, 275, 460 |
| ZrmI | AGTACT | 1 cut(s) | 239 |