No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1076, 2207 |
| AccI | GTMKAC | 1 cut(s) | 127 |
| AccII | CGCG | 1 cut(s) | 1066 |
| AciI | CCGC | 7 cut(s) | 49, 462, 1355, 1416, 1457, 1487, 1594 |
| AclWI | GGATC | 2 cut(s) | 232, 642 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1169 |
| AflII | CTTAAG | 2 cut(s) | 131, 881 |
| AhlI | ACTAGT | 1 cut(s) | 1042 |
| AluBI | AGCT | 5 cut(s) | 1303, 1954, 2082, 2115, 2211 |
| AluI | AGCT | 5 cut(s) | 1303, 1954, 2082, 2115, 2211 |
| Alw26I | GTCTC | 4 cut(s) | 58, 212, 895, 1931 |
| AlwI | GGATC | 2 cut(s) | 232, 642 |
| Ama87I | CYCGRG | 1 cut(s) | 209 |
| AoxI | GGCC | 2 cut(s) | 430, 1680 |
| ApeKI | GCWGC | 2 cut(s) | 1454, 1484 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 277, 309, 1001, 1033, 1792, 1824 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2058 |
| AspA2I | CCTAGG | 1 cut(s) | 1736 |
| AspS9I | GGNCC | 2 cut(s) | 431, 1680 |
| AsuHPI | GGTGA | 5 cut(s) | 178, 295, 743, 1486, 1972 |
| AsuII | TTCGAA | 1 cut(s) | 147 |
| AvaI | CYCGRG | 1 cut(s) | 209 |
| AvrII | CCTAGG | 1 cut(s) | 1736 |
| BauI | CACGAG | 1 cut(s) | 1906 |
| BbsI | GAAGAC | 4 cut(s) | 16, 549, 1830, 2125 |
| BbvI | GCAGC | 2 cut(s) | 1441, 1471 |
| BccI | CCATC | 8 cut(s) | 50, 89, 832, 1324, 1418, 1440, 1471, 1813 |
| BceAI | ACGGC | 1 cut(s) | 1671 |
| BcoDI | GTCTC | 4 cut(s) | 58, 212, 895, 1931 |
| BcuI | ACTAGT | 1 cut(s) | 1042 |
| BfrI | CTTAAG | 2 cut(s) | 131, 881 |
| BisI | GCNGC | 7 cut(s) | 1356, 1417, 1455, 1458, 1485, 1488, 1595 |
| BlnI | CCTAGG | 1 cut(s) | 1736 |
| BlsI | GCNGC | 7 cut(s) | 1357, 1418, 1456, 1459, 1486, 1489, 1596 |
| BmeT110I | CYCGRG | 1 cut(s) | 209 |
| BmgT120I | GGNCC | 2 cut(s) | 431, 1680 |
| BmsI | GCATC | 2 cut(s) | 1109, 2002 |
| BpiI | GAAGAC | 4 cut(s) | 16, 549, 1830, 2125 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 103, 135, 1786, 1818 |
| Bpu10I | CCTNAGC | 1 cut(s) | 107 |
| Bpu14I | TTCGAA | 1 cut(s) | 147 |
| BpuEI | CTTGAG | 1 cut(s) | 2200 |
| Bsa29I | ATCGAT | 1 cut(s) | 979 |
| BsaAI | YACGTR | 1 cut(s) | 947 |
| BsaJI | CCNNGG | 1 cut(s) | 1736 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1169 |
| Bse1I | ACTGG | 1 cut(s) | 1127 |
| BseCI | ATCGAT | 1 cut(s) | 979 |
| BseDI | CCNNGG | 1 cut(s) | 1736 |
| BseGI | GGATG | 6 cut(s) | 422, 843, 903, 1451, 1977, 2103 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1169 |
| BseMII | CTCAG | 2 cut(s) | 339, 458 |
| BseNI | ACTGG | 1 cut(s) | 1127 |
| BseRI | GAGGAG | 2 cut(s) | 1295, 1443 |
| BseXI | GCAGC | 2 cut(s) | 1441, 1471 |
| BseYI | CCCAGC | 1 cut(s) | 218 |
| BsgI | GTGCAG | 1 cut(s) | 1276 |
| Bsh1236I | CGCG | 1 cut(s) | 1066 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1070 |
| BshFI | GGCC | 2 cut(s) | 432, 1682 |
| BshVI | ATCGAT | 1 cut(s) | 979 |
| BsiEI | CGRYCG | 1 cut(s) | 1070 |
| BsiHKCI | CYCGRG | 1 cut(s) | 209 |
| BslFI | GGGAC | 2 cut(s) | 271, 1615 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1169 |
| BsmAI | GTCTC | 4 cut(s) | 58, 212, 895, 1931 |
| BsmBI | CGTCTC | 1 cut(s) | 58 |
| BsmFI | GGGAC | 2 cut(s) | 271, 1615 |
| BsmI | GAATGC | 3 cut(s) | 358, 652, 1016 |
| BsnI | GGCC | 2 cut(s) | 432, 1682 |
| BsoBI | CYCGRG | 1 cut(s) | 209 |
| Bsp119I | TTCGAA | 1 cut(s) | 147 |
| Bsp143I | GATC | 7 cut(s) | 213, 237, 476, 634, 976, 1067, 1974 |
| BspACI | CCGC | 7 cut(s) | 49, 462, 1355, 1416, 1457, 1487, 1594 |
| BspANI | GGCC | 2 cut(s) | 432, 1682 |
| BspCNI | CTCAG | 2 cut(s) | 340, 457 |
| BspDI | ATCGAT | 1 cut(s) | 979 |
| BspFNI | CGCG | 1 cut(s) | 1066 |
| BspHI | TCATGA | 2 cut(s) | 1153, 1929 |
| BspPI | GGATC | 2 cut(s) | 232, 642 |
| BspT104I | TTCGAA | 1 cut(s) | 147 |
| BspTI | CTTAAG | 2 cut(s) | 131, 881 |
| BsrI | ACTGG | 1 cut(s) | 1127 |
| BssECI | CCNNGG | 1 cut(s) | 1736 |
| BssMI | GATC | 7 cut(s) | 213, 237, 476, 634, 976, 1067, 1974 |
| BssSI | CACGAG | 1 cut(s) | 1906 |
| BssT1I | CCWWGG | 1 cut(s) | 1736 |
| Bst2BI | CACGAG | 1 cut(s) | 1906 |
| BstAFI | CTTAAG | 2 cut(s) | 131, 881 |
| BstBAI | YACGTR | 1 cut(s) | 947 |
| BstBI | TTCGAA | 1 cut(s) | 147 |
| BstC8I | GCNNGC | 2 cut(s) | 2044, 2223 |
| BstDEI | CTNAG | 5 cut(s) | 107, 348, 444, 1122, 1884 |
| BstEII | GGTNACC | 1 cut(s) | 1718 |
| BstF5I | GGATG | 6 cut(s) | 422, 843, 903, 1451, 1977, 2103 |
| BstFNI | CGCG | 1 cut(s) | 1066 |
| BstKTI | GATC | 7 cut(s) | 216, 240, 479, 637, 979, 1070, 1977 |
| BstMAI | GTCTC | 4 cut(s) | 58, 212, 895, 1931 |
| BstMBI | GATC | 7 cut(s) | 213, 237, 476, 634, 976, 1067, 1974 |
| BstMCI | CGRYCG | 1 cut(s) | 1070 |
| BstPI | GGTNACC | 1 cut(s) | 1718 |
| BstUI | CGCG | 1 cut(s) | 1066 |
| BstV1I | GCAGC | 2 cut(s) | 1441, 1471 |
| BstV2I | GAAGAC | 4 cut(s) | 16, 549, 1830, 2125 |
| Bsu15I | ATCGAT | 1 cut(s) | 979 |
| BsuRI | GGCC | 2 cut(s) | 432, 1682 |
| BsuTUI | ATCGAT | 1 cut(s) | 979 |
| BtgZI | GCGATG | 1 cut(s) | 1343 |
| BtsCI | GGATG | 6 cut(s) | 422, 843, 903, 1451, 1977, 2103 |
| BtsI | GCAGTG | 1 cut(s) | 2128 |
| BtsIMutI | CAGTG | 1 cut(s) | 2128 |
| Cac8I | GCNNGC | 2 cut(s) | 2044, 2223 |
| CciI | TCATGA | 2 cut(s) | 1153, 1929 |
| Cfr13I | GGNCC | 2 cut(s) | 431, 1680 |
| ClaI | ATCGAT | 1 cut(s) | 979 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1347, 1382 |
| DdeI | CTNAG | 5 cut(s) | 107, 348, 444, 1122, 1884 |
| DpnI | GATC | 7 cut(s) | 215, 239, 478, 636, 978, 1069, 1976 |
| DpnII | GATC | 7 cut(s) | 213, 237, 476, 634, 976, 1067, 1974 |
| DraI | TTTAAA | 1 cut(s) | 1869 |
| Eco130I | CCWWGG | 1 cut(s) | 1736 |
| Eco88I | CYCGRG | 1 cut(s) | 209 |
| Eco91I | GGTNACC | 1 cut(s) | 1718 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1680 |
| EcoO65I | GGTNACC | 1 cut(s) | 1718 |
| EcoRI | GAATTC | 3 cut(s) | 314, 1053, 1819 |
| EcoT14I | CCWWGG | 1 cut(s) | 1736 |
| EcoT22I | ATGCAT | 1 cut(s) | 1115 |
| ErhI | CCWWGG | 1 cut(s) | 1736 |
| Esp3I | CGTCTC | 1 cut(s) | 58 |
| FalI | AAGNNNNNCTT | 9 cut(s) | 30, 26, 58, 864, 896, 1292, 1324, 2043, 2075 |
| FaqI | GGGAC | 2 cut(s) | 271, 1615 |
| FblI | GTMKAC | 1 cut(s) | 127 |
| Fnu4HI | GCNGC | 7 cut(s) | 1356, 1417, 1455, 1458, 1485, 1488, 1595 |
| FokI | GGATG | 6 cut(s) | 409, 850, 910, 1458, 1984, 2110 |
| Fsp4HI | GCNGC | 7 cut(s) | 1356, 1417, 1455, 1458, 1485, 1488, 1595 |
| GluI | GCNGC | 7 cut(s) | 1356, 1417, 1455, 1458, 1485, 1488, 1595 |
| GsaI | CCCAGC | 1 cut(s) | 222 |
| HaeIII | GGCC | 2 cut(s) | 432, 1682 |
| HincII | GTYRAC | 4 cut(s) | 128, 367, 1009, 1744 |
| HindII | GTYRAC | 4 cut(s) | 128, 367, 1009, 1744 |
| HindIII | AAGCTT | 2 cut(s) | 2080, 2209 |
| HpaI | GTTAAC | 1 cut(s) | 1744 |
| HphI | GGTGA | 5 cut(s) | 178, 295, 743, 1486, 1972 |
| Hpy166II | GTNNAC | 6 cut(s) | 128, 367, 534, 1009, 1203, 1744 |
| Hpy188I | TCNGA | 5 cut(s) | 349, 447, 549, 1537, 1564 |
| Hpy188III | TCNNGA | 9 cut(s) | 63, 209, 211, 359, 454, 474, 483, 1154, 1930 |
| Hpy8I | GTNNAC | 6 cut(s) | 128, 367, 534, 1009, 1203, 1744 |
| HpyAV | CCTTC | 6 cut(s) | 154, 247, 878, 1163, 1444, 1627 |
| HpyCH4IV | ACGT | 2 cut(s) | 946, 1295 |
| HpyF3I | CTNAG | 5 cut(s) | 107, 348, 444, 1122, 1884 |
| HpySE526I | ACGT | 2 cut(s) | 946, 1295 |
| KspAI | GTTAAC | 1 cut(s) | 1744 |
| Kzo9I | GATC | 7 cut(s) | 213, 237, 476, 634, 976, 1067, 1974 |
| LmnI | GCTCC | 2 cut(s) | 361, 1308 |
| LpnPI | CCDG | 8 cut(s) | 70, 204, 372, 1140, 1383, 1423, 2001, 2177 |
| Lsp1109I | GCAGC | 2 cut(s) | 1441, 1471 |
| LweI | GCATC | 2 cut(s) | 1109, 2002 |
| MaeII | ACGT | 2 cut(s) | 946, 1295 |
| MaeIII | GTNAC | 6 cut(s) | 113, 283, 519, 863, 1021, 1718 |
| MalI | GATC | 7 cut(s) | 215, 239, 478, 636, 978, 1069, 1976 |
| MboI | GATC | 7 cut(s) | 213, 237, 476, 634, 976, 1067, 1974 |
| MfeI | CAATTG | 1 cut(s) | 610 |
| MlyI | GAGTC | 6 cut(s) | 121, 253, 436, 681, 751, 1795 |
| MmeI | TCCRAC | 2 cut(s) | 1187, 2075 |
| Mph1103I | ATGCAT | 1 cut(s) | 1115 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2058 |
| MslI | CAYNNNNRTG | 3 cut(s) | 484, 1108, 1970 |
| MspA1I | CMGCKG | 1 cut(s) | 49 |
| MspCI | CTTAAG | 2 cut(s) | 131, 881 |
| MunI | CAATTG | 1 cut(s) | 610 |
| Mva1269I | GAATGC | 3 cut(s) | 358, 652, 1016 |
| MvnI | CGCG | 1 cut(s) | 1066 |
| NdeII | GATC | 7 cut(s) | 213, 237, 476, 634, 976, 1067, 1974 |
| NmuCI | GTSAC | 2 cut(s) | 113, 283 |
| NsiI | ATGCAT | 1 cut(s) | 1115 |
| NspV | TTCGAA | 1 cut(s) | 147 |
| PaeR7I | CTCGAG | 1 cut(s) | 209 |
| PagI | TCATGA | 2 cut(s) | 1153, 1929 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1017 |
| PctI | GAATGC | 3 cut(s) | 358, 652, 1016 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2058 |
| PfeI | GAWTC | 9 cut(s) | 39, 136, 183, 223, 344, 550, 1142, 1765, 1783 |
| PkrI | GCNGC | 7 cut(s) | 1357, 1418, 1456, 1459, 1486, 1489, 1596 |
| Ple19I | CGATCG | 1 cut(s) | 1070 |
| PleI | GAGTC | 6 cut(s) | 120, 253, 436, 681, 750, 1795 |
| PpsI | GAGTC | 6 cut(s) | 120, 253, 436, 681, 750, 1795 |
| Ppu21I | YACGTR | 1 cut(s) | 947 |
| PsiI | TTATAA | 2 cut(s) | 1076, 2207 |
| PspEI | GGTNACC | 1 cut(s) | 1718 |
| PspFI | CCCAGC | 1 cut(s) | 218 |
| PspPI | GGNCC | 2 cut(s) | 431, 1680 |
| PvuI | CGATCG | 1 cut(s) | 1070 |
| RseI | CAYNNNNRTG | 3 cut(s) | 484, 1108, 1970 |
| SalI | GTCGAC | 1 cut(s) | 126 |
| SatI | GCNGC | 7 cut(s) | 1356, 1417, 1455, 1458, 1485, 1488, 1595 |
| Sau3AI | GATC | 7 cut(s) | 213, 237, 476, 634, 976, 1067, 1974 |
| Sau96I | GGNCC | 2 cut(s) | 431, 1680 |
| SchI | GAGTC | 6 cut(s) | 121, 253, 436, 681, 751, 1795 |
| SfaNI | GCATC | 2 cut(s) | 1109, 2002 |
| Sfr274I | CTCGAG | 1 cut(s) | 209 |
| SfuI | TTCGAA | 1 cut(s) | 147 |
| SlaI | CTCGAG | 1 cut(s) | 209 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 484, 1108, 1970 |
| SmlI | CTYRAG | 4 cut(s) | 131, 209, 881, 2215 |
| SmoI | CTYRAG | 4 cut(s) | 131, 209, 881, 2215 |
| SpeI | ACTAGT | 1 cut(s) | 1042 |
| SsiI | CCGC | 7 cut(s) | 49, 462, 1355, 1416, 1457, 1487, 1594 |
| SspI | AATATT | 1 cut(s) | 1936 |
| StyI | CCWWGG | 1 cut(s) | 1736 |
| TaiI | ACGT | 2 cut(s) | 949, 1298 |
| TaqI | TCGA | 8 cut(s) | 62, 127, 147, 210, 436, 979, 1811, 2072 |
| TauI | GCSGC | 5 cut(s) | 1358, 1419, 1460, 1490, 1597 |
| TfiI | GAWTC | 9 cut(s) | 39, 136, 183, 223, 344, 550, 1142, 1765, 1783 |
| TscAI | CASTG | 1 cut(s) | 2128 |
| TseFI | GTSAC | 2 cut(s) | 113, 283 |
| TseI | GCWGC | 2 cut(s) | 1454, 1484 |
| Tsp45I | GTSAC | 2 cut(s) | 113, 283 |
| TspGWI | ACGGA | 2 cut(s) | 230, 519 |
| TspRI | CASTG | 1 cut(s) | 2128 |
| Vha464I | CTTAAG | 2 cut(s) | 131, 881 |
| XbaI | TCTAGA | 2 cut(s) | 473, 482 |
| XhoI | CTCGAG | 1 cut(s) | 209 |
| XmaJI | CCTAGG | 1 cut(s) | 1736 |
| XmiI | GTMKAC | 1 cut(s) | 127 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2058 |
| Zsp2I | ATGCAT | 1 cut(s) | 1115 |