Retrotransposon gag protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 167, 180 |
| AcoI | YGGCCR | 1 cut(s) | 183 |
| AcsI | RAATTY | 1 cut(s) | 131 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 192 |
| AflIII | ACRYGT | 1 cut(s) | 261 |
| AgsI | TTSAA | 2 cut(s) | 50, 125 |
| AluBI | AGCT | 1 cut(s) | 41 |
| AluI | AGCT | 1 cut(s) | 41 |
| AlwI | GGATC | 2 cut(s) | 167, 180 |
| AoxI | GGCC | 1 cut(s) | 183 |
| ApeKI | GCWGC | 1 cut(s) | 41 |
| ApoI | RAATTY | 1 cut(s) | 131 |
| BamHI | GGATCC | 1 cut(s) | 172 |
| BbvI | GCAGC | 1 cut(s) | 28 |
| BccI | CCATC | 1 cut(s) | 175 |
| BfmI | CTRYAG | 1 cut(s) | 30 |
| BisI | GCNGC | 1 cut(s) | 42 |
| BlsI | GCNGC | 1 cut(s) | 43 |
| BmiI | GGNNCC | 1 cut(s) | 174 |
| BmsI | GCATC | 1 cut(s) | 206 |
| BsaJI | CCNNGG | 1 cut(s) | 186 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 192 |
| Bse1I | ACTGG | 2 cut(s) | 106, 152 |
| Bse3DI | GCAATG | 1 cut(s) | 273 |
| BseDI | CCNNGG | 1 cut(s) | 186 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 192 |
| BseMI | GCAATG | 1 cut(s) | 273 |
| BseNI | ACTGG | 2 cut(s) | 106, 152 |
| BseXI | GCAGC | 1 cut(s) | 28 |
| BshFI | GGCC | 1 cut(s) | 185 |
| BslFI | GGGAC | 1 cut(s) | 272 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 192 |
| BsmFI | GGGAC | 1 cut(s) | 272 |
| BsnI | GGCC | 1 cut(s) | 185 |
| Bsp143I | GATC | 1 cut(s) | 172 |
| BspANI | GGCC | 1 cut(s) | 185 |
| BspHI | TCATGA | 1 cut(s) | 114 |
| BspLI | GGNNCC | 1 cut(s) | 174 |
| BspMAI | CTGCAG | 1 cut(s) | 34 |
| BspPI | GGATC | 2 cut(s) | 167, 180 |
| BsrDI | GCAATG | 1 cut(s) | 273 |
| BsrI | ACTGG | 2 cut(s) | 106, 152 |
| BssECI | CCNNGG | 1 cut(s) | 186 |
| BssMI | GATC | 1 cut(s) | 172 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 298 |
| BstKTI | GATC | 1 cut(s) | 175 |
| BstMBI | GATC | 1 cut(s) | 172 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 38, 298 |
| BstNSI | RCATGY | 1 cut(s) | 265 |
| BstSFI | CTRYAG | 1 cut(s) | 30 |
| BstV1I | GCAGC | 1 cut(s) | 28 |
| BstX2I | RGATCY | 1 cut(s) | 172 |
| BstYI | RGATCY | 1 cut(s) | 172 |
| BsuRI | GGCC | 1 cut(s) | 185 |
| CciI | TCATGA | 1 cut(s) | 114 |
| CviAII | CATG | 4 cut(s) | 14, 115, 262, 298 |
| CviJI | RGCY | 3 cut(s) | 41, 185, 196 |
| CviKI_1 | RGCY | 3 cut(s) | 41, 185, 196 |
| DpnI | GATC | 1 cut(s) | 174 |
| DpnII | GATC | 1 cut(s) | 172 |
| DraI | TTTAAA | 1 cut(s) | 160 |
| EaeI | YGGCCR | 1 cut(s) | 183 |
| FaeI | CATG | 4 cut(s) | 17, 118, 265, 301 |
| FaiI | YATR | 8 cut(s) | 15, 38, 56, 116, 179, 263, 294, 299 |
| FaqI | GGGAC | 1 cut(s) | 272 |
| FatI | CATG | 4 cut(s) | 13, 114, 261, 297 |
| Fnu4HI | GCNGC | 1 cut(s) | 42 |
| Fsp4HI | GCNGC | 1 cut(s) | 42 |
| GluI | GCNGC | 1 cut(s) | 42 |
| HaeIII | GGCC | 1 cut(s) | 185 |
| Hin1II | CATG | 4 cut(s) | 17, 118, 265, 301 |
| HinfI | GANTC | 2 cut(s) | 111, 121 |
| Hpy188I | TCNGA | 3 cut(s) | 138, 204, 269 |
| Hpy188III | TCNNGA | 2 cut(s) | 50, 115 |
| HpyCH4IV | ACGT | 1 cut(s) | 199 |
| HpyCH4V | TGCA | 2 cut(s) | 32, 301 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 38, 298 |
| HpySE526I | ACGT | 1 cut(s) | 199 |
| Hsp92II | CATG | 4 cut(s) | 17, 118, 265, 301 |
| Kzo9I | GATC | 1 cut(s) | 172 |
| LmnI | GCTCC | 1 cut(s) | 224 |
| LpnPI | CCDG | 2 cut(s) | 87, 165 |
| Lsp1109I | GCAGC | 1 cut(s) | 28 |
| LweI | GCATC | 1 cut(s) | 206 |
| MaeII | ACGT | 1 cut(s) | 199 |
| MalI | GATC | 1 cut(s) | 174 |
| MboI | GATC | 1 cut(s) | 172 |
| MboII | GAAGA | 3 cut(s) | 17, 29, 107 |
| MflI | RGATCY | 1 cut(s) | 172 |
| MluCI | AATT | 1 cut(s) | 131 |
| MlyI | GAGTC | 1 cut(s) | 120 |
| MnlI | CCTC | 3 cut(s) | 68, 111, 181 |
| MseI | TTAA | 1 cut(s) | 159 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 38, 298 |
| NdeII | GATC | 1 cut(s) | 172 |
| NlaIII | CATG | 4 cut(s) | 17, 118, 265, 301 |
| NlaIV | GGNNCC | 1 cut(s) | 174 |
| NmeAIII | GCCGAG | 1 cut(s) | 211 |
| NspI | RCATGY | 1 cut(s) | 265 |
| PagI | TCATGA | 1 cut(s) | 114 |
| PciI | ACATGT | 1 cut(s) | 261 |
| PfeI | GAWTC | 1 cut(s) | 121 |
| PkrI | GCNGC | 1 cut(s) | 43 |
| PleI | GAGTC | 1 cut(s) | 119 |
| PpsI | GAGTC | 1 cut(s) | 119 |
| PscI | ACATGT | 1 cut(s) | 261 |
| PspN4I | GGNNCC | 1 cut(s) | 174 |
| PstI | CTGCAG | 1 cut(s) | 34 |
| PsuI | RGATCY | 1 cut(s) | 172 |
| SaqAI | TTAA | 1 cut(s) | 159 |
| SatI | GCNGC | 1 cut(s) | 42 |
| Sau3AI | GATC | 1 cut(s) | 172 |
| SchI | GAGTC | 1 cut(s) | 120 |
| SetI | ASST | 2 cut(s) | 43, 202 |
| SfaNI | GCATC | 1 cut(s) | 206 |
| SfcI | CTRYAG | 1 cut(s) | 30 |
| Sse9I | AATT | 1 cut(s) | 131 |
| TaiI | ACGT | 1 cut(s) | 202 |
| TaqI | TCGA | 1 cut(s) | 109 |
| TasI | AATT | 1 cut(s) | 131 |
| TfiI | GAWTC | 1 cut(s) | 121 |
| Tru1I | TTAA | 1 cut(s) | 159 |
| Tru9I | TTAA | 1 cut(s) | 159 |
| TseI | GCWGC | 1 cut(s) | 41 |
| TspDTI | ATGAA | 1 cut(s) | 30 |
| XapI | RAATTY | 1 cut(s) | 131 |
| XceI | RCATGY | 1 cut(s) | 265 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 52, 98 |