Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0000883

Physical Location & Seq

Genomic Coordinates Forward (+)

934617 .. 939601

Gene Structure 4985 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g01530.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGGGAATGGGAACTTGGCAGATGCATAAAAGGAAGCAAGAAGAGCAATGTGTTTTCAGTCCTCAGCTGGCATTGAAGGACCACAATCCAATTGTTAATGGGTTACGGCAGCGAAAGCATAAGAAATCTAGAATGGATCTCAATCAAGAGGCTGTTCTGAACGGGCATGTATTCCAGAAGATGCTGCAGAGTCAGAACTCTGCTGAAGGGGAAAGAGATCAGTTACATGCATTCTCTCAGCATAATGTGATACCAAATCAAGATCAGCAAGCTATTTTGAATGCTGCTCCACAGTTGGGAGTAGATAGAGAAAAGAAGCTGCAATGGATGAGACACCCAGTTCCACAACAGGAGATCGTGCATCAAGCAACTGCAGTGCACCAGCCCGGTGTTTGTTCACATCGGCTAATGCAGTACCTGTCTTATACTCGAACTCGGCCAATTGACAATAACTTGGGCTATTGGAGGCAATTTGTGGCAGAGTTCTATGACCCCTGTGCCAAAAGAAGGTGGTGTTTGTCCTGCTATGATAAAGTTGGAGAGCATGCCCTTGGTATTTCCCTCCATGCAGCTATGGTATCATCATGGCCGTGTAGCCTATGTAATTGTCAATCAGGGCGGGGATTTGAGGTGAGTTTTGAAGTGCTTGCAAGGCTAAGTAAAATAACATTCGAGGGTGGTGTAGTTGATGAACTCTTGTTCCTGGATATGCCTCGTGAGAGTAGATTTTCTTCAGGAATATTAATGCTGGAATGTGGAAGAGCAGTTCAAGAAAGTGTCTATGAGCAGCTTCAAGTTGTGCATGAAGGTCGACTTCGAATAATATTCTCTCCTAATTTGAAGATATTGTCCTGGGAATTTTGTTCACGCTCTCATGAAATTTTTCTTCGTCGAACTTCTGTTGCACCTCAGGTTTCTGAGTTGCGTAGTGCTGTGCGGAATTATCAGTGCTCTATTGATGATAGAGGATCTAATGGAGTTTCATCCCAAGATGTACAAACTTGCAATAAGATCCTGGAAGCAGGAGGACAAATTGAAAAAGCTTTGGGTCTACATGAAGTCGATCATTTGGGATTTTCTAAGAAGTATACCCGGTTCTTGCAGATAGCTGATGTTGTTGATAGTATGAAAGATCTAATGACTTTATGTCATAATAAGGGCCCTAGCCCAATTGAGAGCCTGAAGAGTTACTGCAGAGGAACTCCTACCAAGCTCCCAAAAAAGAAAATAAAAGGAAAAGATGAAAAAGAGAGTGCTCAAGGTCTGTCGAAAGACGCTAATAAGTTGATGGCTACATCATGTGGTCTAATAAGAAGTAATGCAAATCAAAGCTGCTCATCTATCGATACTGAAGGTTTCTCAAATGTCCCAGAATATAACCCCATTGCTAGCAGAGATAGCAAGTGGCAAACGAGTTTAAACCAGTACGCTTCACCAATTGAGGGTCCTAAGACCTCAAATTCAGGACTGTACAAGAATTCAGTGGGAAATGGCTTGTTAAATTCAAATTCTTCTGTGCAGCAGGATCCTGTGCAGAACTTAATACAGGAATTTATGAACAGCCAAGCAGTGAATAGGCATGGTAGGGATGAAGGCAACTGGGGAAGAGGTAAAAGTTCAGCTGTAGACTTGACATCAGGAGTTTTGGGCCGCCCAGCAGCAGAAGCTGCCCTAGGAAATGTGTTGGGCAGTGTGCCAGTGACAACGCATCATTCTCACTCGAATCCTGCCTTGATTAGGAACTTGTCTGAAGTGGGTGGGAATTTTCATGGGAAGCTTTTATTACCGGAATCAGGCTTCAGCAGGTCTAATGGTTATCATGATCACAGTAAGTTTTATGGCAATGATAATGGCATGAACTATGGTTGGAAGGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001666 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009909 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010154 GO:0010243 GO:0010272 GO:0014070 GO:0022414 GO:0032501 GO:0032502 GO:0033554 GO:0035670 GO:0036293 GO:0042221 GO:0042493 GO:0043207 GO:0046677 GO:0046898 GO:0046982 GO:0046983 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048580 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060090 GO:0060992 GO:0061458 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0090567 GO:0097159 GO:0097305 GO:0099402 GO:1901363 GO:1901654 GO:1901698 GO:1901700 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LIM_bind

Protein Analysis

626

Amino Acids

69.75

Weight (kDa)

8.85

Isoelectric Point (pI)

48.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LIM_bind	PF01803	135 - 395	6.3e-54	LIM-domain binding protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000883)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g08720 FvH4_3g22621 FvH4_4g11702 FvH4_5g01520 FvH4_5g01520 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g36380 FvH4_6g01730 FvH4_6g09170 FvH4_6g20010 FvH4_6g28113
malus_domestica	MD06G1073100.v1.1
prunus_persica	Prupe.2G067700_v2.0.a1 Prupe.5G091500_v2.0.a1 Prupe.5G091500_v2.0.a1 Prupe.5G091500_v2.0.a1 Prupe.7G013000_v2.0.a1
pyrus_communis	pycom01g10330 pycom06g07250
rosa_chinensis	RchiOBHm_Chr7g0199161 RchiOBHm_Chr7g0199171
rosa_laevigata	RLG00000003809 RLG00000014802
rosa_multiflora	Rmu_sc0004791.1_g000001 Rmu_sc0006115.1_g000003 Rmu_sc0037059.1_g000001
rosa_roxburghii	Rroxscaffold_1G00015450 Rroxscaffold_1G00015460 Rroxscaffold_3G00256990 Rroxscaffold_3G00257000 Rroxscaffold_4G00326050 Rroxscaffold_7G00182010
rosa_rugosa	Rorug03G0005500 Rorug03G0273000 Rorug05G0372800 Rorug05G0372900 Rorug07G0053100
rosa_samantha	Rh1BG202800 Rh1DG102500 Rh3AG101900 Rh3AG320900 Rh3CG107700 Rh3DG355100 Rh7AG176700 Rh7AG176800 Rh7AG365300 Rh7BG180300 Rh7CG185900 Rh7CG186000 Rh7CG384200 Rh7DG179700 Rh7DG179800
rosa_wichuraiana	Rw1G014270 Rw3G028010 Rw7G015540 Rw7G015550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1794
AccI	GTMKAC	4 cut(s)	811, 1051, 1088, 1626
AciI	CCGC	3 cut(s)	619, 937, 1651
AclWI	GGATC	5 cut(s)	144, 976, 1006, 1520, 1533
AcoI	YGGCCR	2 cut(s)	437, 587
AcsI	RAATTY	8 cut(s)	857, 879, 1459, 1477, 1501, 1507, 1550, 1762
AcuI	CTGAAG	6 cut(s)	225, 717, 1202, 1371, 1770, 1783
AfaI	GTAC	4 cut(s)	416, 996, 1427, 1472
AfiI	CCNNNNNNNGG	5 cut(s)	296, 507, 1442, 1737, 1793
AgsI	TTSAA	8 cut(s)	76, 280, 641, 770, 794, 841, 1037, 1506
AhdI	GACNNNNNGTC	1 cut(s)	1146
AjnI	CCWGG	3 cut(s)	702, 851, 1014
AjuI	GAANNNNNNNTTGG	1 cut(s)	30
AloI	GAACNNNNNNTCC	4 cut(s)	684, 716, 750, 782
Alw21I	GWGCWC	3 cut(s)	381, 953, 1258
Alw26I	GTCTC	1 cut(s)	325
Alw44I	GTGCAC	1 cut(s)	377
AlwI	GGATC	5 cut(s)	144, 976, 1006, 1520, 1533
AlwNI	CAGNNNCTG	2 cut(s)	418, 1667
AoxI	GGCC	4 cut(s)	437, 587, 1159, 1648
ApaI	GGGCCC	1 cut(s)	1163
ApaLI	GTGCAC	1 cut(s)	377
ApoI	RAATTY	8 cut(s)	857, 879, 1459, 1477, 1501, 1507, 1550, 1762
AseI	ATTAAT	1 cut(s)	743
Asp700I	GAANNNNTTC	1 cut(s)	882
AspA2I	CCTAGG	1 cut(s)	1672
AspS9I	GGNCC	5 cut(s)	79, 1159, 1160, 1445, 1648
AsuC2I	CCSGG	2 cut(s)	387, 1093
AsuHPI	GGTGA	2 cut(s)	643, 1425
AsuII	TTCGAA	1 cut(s)	817
AsuNHI	GCTAGC	1 cut(s)	1388
AvaII	GGWCC	2 cut(s)	79, 1445
AvrII	CCTAGG	1 cut(s)	1672
AxyI	CCTNAGG	1 cut(s)	909
BaeGI	GKGCMC	2 cut(s)	381, 1163
BamHI	GGATCC	1 cut(s)	1525
BanII	GRGCYC	1 cut(s)	1163
BarI	GAAGNNNNNNTAC	2 cut(s)	715, 747
BauI	CACGAG	1 cut(s)	714
Bbv12I	GWGCWC	3 cut(s)	381, 953, 1258
BbvCI	CCTCAGC	1 cut(s)	63
BccI	CCATC	1 cut(s)	1282
BceAI	ACGGC	2 cut(s)	122, 574
BcgI	CGANNNNNNTGC	2 cut(s)	791, 825
BciT130I	CCWGG	3 cut(s)	704, 853, 1016
BclI	TGATCA	1 cut(s)	1822
BcnI	CCSGG	2 cut(s)	387, 1093
BcoDI	GTCTC	1 cut(s)	325
BfaI	CTAG	4 cut(s)	129, 1164, 1389, 1673
BfmI	CTRYAG	4 cut(s)	185, 372, 1192, 1623
BfuAI	ACCTGC	1 cut(s)	1794
BglII	AGATCT	1 cut(s)	1132
BlnI	CCTAGG	1 cut(s)	1672
Bme1390I	CCNGG	5 cut(s)	387, 704, 853, 1016, 1093
Bme18I	GGWCC	2 cut(s)	79, 1445
BmeRI	GACNNNNNGTC	1 cut(s)	1146
BmgT120I	GGNCC	5 cut(s)	79, 1159, 1160, 1445, 1648
BmiI	GGNNCC	3 cut(s)	1161, 1446, 1527
BmrFI	CCNGG	5 cut(s)	387, 704, 853, 1016, 1093
BmrI	ACTGGG	2 cut(s)	332, 1609
BmsI	GCATC	4 cut(s)	12, 171, 370, 1717
BmtI	GCTAGC	1 cut(s)	1392
BmuI	ACTGGG	2 cut(s)	332, 1609
Bpu10I	CCTNAGC	1 cut(s)	63
Bpu14I	TTCGAA	1 cut(s)	817
BpuEI	CTTGAG	1 cut(s)	1242
BpuMI	CCSGG	2 cut(s)	387, 1093
Bsa29I	ATCGAT	1 cut(s)	1344
BsaBI	GATNNNNATC	1 cut(s)	141
BsaJI	CCNNGG	3 cut(s)	550, 852, 1672
BsaWI	WCCGGW	1 cut(s)	1786
Bsc4I	CCNNNNNNNGG	5 cut(s)	296, 507, 1442, 1737, 1793
Bse1I	ACTGG	4 cut(s)	338, 1423, 1604, 1697
Bse21I	CCTNAGG	1 cut(s)	909
Bse3DI	GCAATG	4 cut(s)	53, 329, 1383, 1849
Bse8I	GATNNNNATC	1 cut(s)	141
BseBI	CCWGG	3 cut(s)	704, 853, 1016
BseCI	ATCGAT	1 cut(s)	1344
BseDI	CCNNGG	3 cut(s)	550, 852, 1672
BseGI	GGATG	3 cut(s)	333, 983, 1594
BseJI	GATNNNNATC	1 cut(s)	141
BseLI	CCNNNNNNNGG	5 cut(s)	296, 507, 1442, 1737, 1793
BseMI	GCAATG	4 cut(s)	53, 329, 1383, 1849
BseMII	CTCAG	4 cut(s)	77, 251, 909, 923
BseNI	ACTGG	4 cut(s)	338, 1423, 1604, 1697
BseSI	GKGCMC	2 cut(s)	381, 1163
BseYI	CCCAGC	1 cut(s)	1654
BsgI	GTGCAG	2 cut(s)	1538, 1553
BshFI	GGCC	4 cut(s)	439, 589, 1161, 1650
BshVI	ATCGAT	1 cut(s)	1344
BsiHKAI	GWGCWC	3 cut(s)	381, 953, 1258
BsiSI	CCGG	3 cut(s)	387, 1093, 1787
BslFI	GGGAC	1 cut(s)	1352
BslI	CCNNNNNNNGG	5 cut(s)	296, 507, 1442, 1737, 1793
BsmAI	GTCTC	1 cut(s)	325
BsmFI	GGGAC	1 cut(s)	1352
BsmI	GAATGC	2 cut(s)	230, 286
BsnI	GGCC	4 cut(s)	439, 589, 1161, 1650
Bsp119I	TTCGAA	1 cut(s)	817
Bsp120I	GGGCCC	1 cut(s)	1159
Bsp1286I	GDGCHC	4 cut(s)	381, 953, 1163, 1258
Bsp1407I	TGTACA	2 cut(s)	994, 1470
BspACI	CCGC	3 cut(s)	619, 937, 1651
BspANI	GGCC	4 cut(s)	439, 589, 1161, 1650
BspCNI	CTCAG	4 cut(s)	76, 250, 910, 922
BspDI	ATCGAT	1 cut(s)	1344
BspHI	TCATGA	2 cut(s)	874, 1819
BspLI	GGNNCC	3 cut(s)	1161, 1446, 1527
BspMAI	CTGCAG	3 cut(s)	189, 376, 1196
BspMI	ACCTGC	1 cut(s)	1794
BspOI	GCTAGC	1 cut(s)	1392
BspPI	GGATC	5 cut(s)	144, 976, 1006, 1520, 1533
BspQI	GCTCTTC	2 cut(s)	36, 754
BspT104I	TTCGAA	1 cut(s)	817
BsrDI	GCAATG	4 cut(s)	53, 329, 1383, 1849
BsrGI	TGTACA	2 cut(s)	994, 1470
BsrI	ACTGG	4 cut(s)	338, 1423, 1604, 1697
BssECI	CCNNGG	3 cut(s)	550, 852, 1672
BssNAI	GTATAC	1 cut(s)	1089
BssSI	CACGAG	1 cut(s)	714
BssT1I	CCWWGG	2 cut(s)	550, 1672
Bst1107I	GTATAC	1 cut(s)	1089
Bst2BI	CACGAG	1 cut(s)	714
Bst2UI	CCWGG	3 cut(s)	704, 853, 1016
Bst4CI	ACNGT	3 cut(s)	294, 1470, 1829
Bst6I	CTCTTC	4 cut(s)	36, 754, 1178, 1600
BstAPI	GCANNNNNTGC	1 cut(s)	1667
BstAUI	TGTACA	2 cut(s)	994, 1470
BstBI	TTCGAA	1 cut(s)	817
BstC8I	GCNNGC	5 cut(s)	69, 270, 546, 648, 1390
BstDEI	CTNAG	7 cut(s)	63, 237, 656, 909, 918, 1080, 1449
BstENI	CCTNNNNNAGG	1 cut(s)	1735
BstF5I	GGATG	3 cut(s)	333, 983, 1594
BstMAI	GTCTC	1 cut(s)	325
BstMWI	GCNNNNNNNGC	6 cut(s)	43, 115, 652, 1398, 1664, 1667
BstNI	CCWGG	3 cut(s)	704, 853, 1016
BstNSI	RCATGY	3 cut(s)	170, 230, 548
BstSCI	CCNGG	5 cut(s)	385, 702, 851, 1014, 1091
BstSFI	CTRYAG	4 cut(s)	185, 372, 1192, 1623
BstSLI	GKGCMC	2 cut(s)	381, 1163
BstX2I	RGATCY	5 cut(s)	136, 968, 1011, 1132, 1525
BstYI	RGATCY	5 cut(s)	136, 968, 1011, 1132, 1525
BstZ17I	GTATAC	1 cut(s)	1089
Bsu15I	ATCGAT	1 cut(s)	1344
Bsu36I	CCTNAGG	1 cut(s)	909
BsuRI	GGCC	4 cut(s)	439, 589, 1161, 1650
BsuTUI	ATCGAT	1 cut(s)	1344
BtsCI	GGATG	3 cut(s)	333, 983, 1594
BtsI	GCAGTG	3 cut(s)	381, 1575, 1696
BtsIMutI	CAGTG	6 cut(s)	381, 953, 1488, 1575, 1696, 1704
BveI	ACCTGC	1 cut(s)	1794
Cac8I	GCNNGC	5 cut(s)	69, 270, 546, 648, 1390
CaiI	CAGNNNCTG	2 cut(s)	418, 1667
CciI	TCATGA	2 cut(s)	874, 1819
Cfr13I	GGNCC	5 cut(s)	79, 1159, 1160, 1445, 1648
ClaI	ATCGAT	1 cut(s)	1344
CseI	GACGC	1 cut(s)	1283
Csp6I	GTAC	4 cut(s)	415, 995, 1426, 1471
CviQI	GTAC	4 cut(s)	415, 995, 1426, 1471
DdeI	CTNAG	7 cut(s)	63, 237, 656, 909, 918, 1080, 1449
DraI	TTTAAA	1 cut(s)	1419
DriI	GACNNNNNGTC	1 cut(s)	1146
EaeI	YGGCCR	2 cut(s)	437, 587
Eam1104I	CTCTTC	4 cut(s)	36, 754, 1178, 1600
Eam1105I	GACNNNNNGTC	1 cut(s)	1146
EarI	CTCTTC	4 cut(s)	36, 754, 1178, 1600
Eco130I	CCWWGG	2 cut(s)	550, 1672
Eco24I	GRGCYC	1 cut(s)	1163
Eco47I	GGWCC	2 cut(s)	79, 1445
Eco57I	CTGAAG	6 cut(s)	225, 717, 1202, 1371, 1770, 1783
Eco81I	CCTNAGG	1 cut(s)	909
EcoNI	CCTNNNNNAGG	1 cut(s)	1735
EcoO109I	RGGNCCY	3 cut(s)	1159, 1160, 1445
EcoRI	GAATTC	1 cut(s)	1477
EcoRII	CCWGG	3 cut(s)	702, 851, 1014
EcoT14I	CCWWGG	2 cut(s)	550, 1672
EcoT22I	ATGCAT	2 cut(s)	27, 232
EcoT38I	GRGCYC	1 cut(s)	1163
ErhI	CCWWGG	2 cut(s)	550, 1672
FalI	AAGNNNNNCTT	2 cut(s)	798, 830
FaqI	GGGAC	1 cut(s)	1352
FauI	CCCGC	1 cut(s)	612
FbaI	TGATCA	1 cut(s)	1822
FblI	GTMKAC	4 cut(s)	811, 1051, 1088, 1626
FokI	GGATG	3 cut(s)	340, 970, 1601
FriOI	GRGCYC	1 cut(s)	1163
FspBI	CTAG	4 cut(s)	129, 1164, 1389, 1673
GsaI	CCCAGC	1 cut(s)	1658
HaeIII	GGCC	4 cut(s)	439, 589, 1161, 1650
HapII	CCGG	3 cut(s)	387, 1093, 1787
HgaI	GACGC	1 cut(s)	1283
HincII	GTYRAC	1 cut(s)	812
HindII	GTYRAC	1 cut(s)	812
HindIII	AAGCTT	2 cut(s)	1041, 1775
HinfI	GANTC	3 cut(s)	190, 1723, 1790
HpaII	CCGG	3 cut(s)	387, 1093, 1787
HphI	GGTGA	2 cut(s)	643, 1425
Hpy166II	GTNNAC	7 cut(s)	379, 398, 812, 866, 1052, 1089, 1627
Hpy188I	TCNGA	4 cut(s)	159, 195, 919, 1750
Hpy8I	GTNNAC	7 cut(s)	379, 398, 812, 866, 1052, 1089, 1627
Hpy99I	CGWCG	1 cut(s)	894
HpyAV	CCTTC	7 cut(s)	70, 200, 501, 800, 1346, 1586, 1864
HpyCH4III	ACNGT	3 cut(s)	294, 1470, 1829
HpyF10VI	GCNNNNNNNGC	6 cut(s)	43, 115, 652, 1398, 1664, 1667
HpyF3I	CTNAG	7 cut(s)	63, 237, 656, 909, 918, 1080, 1449
Ksp22I	TGATCA	1 cut(s)	1822
LguI	GCTCTTC	2 cut(s)	36, 754
LmnI	GCTCC	2 cut(s)	292, 1218
LweI	GCATC	4 cut(s)	12, 171, 370, 1717
MaeI	CTAG	4 cut(s)	129, 1164, 1389, 1673
MaeIII	GTNAC	4 cut(s)	102, 222, 1187, 1699
MboII	GAAGA	9 cut(s)	53, 190, 723, 771, 853, 878, 1195, 1503, 1617
MfeI	CAATTG	4 cut(s)	90, 441, 1170, 1437
MflI	RGATCY	5 cut(s)	136, 968, 1011, 1132, 1525
MhlI	GDGCHC	4 cut(s)	381, 953, 1163, 1258
MlyI	GAGTC	1 cut(s)	199
MmeI	TCCRAC	2 cut(s)	517, 1847
Mph1103I	ATGCAT	2 cut(s)	27, 232
MroXI	GAANNNNTTC	1 cut(s)	882
MseI	TTAA	5 cut(s)	96, 743, 1418, 1499, 1541
MslI	CAYNNNNRTG	1 cut(s)	589
MspA1I	CMGCKG	2 cut(s)	67, 1622
MspI	CCGG	3 cut(s)	387, 1093, 1787
MspR9I	CCNGG	5 cut(s)	387, 704, 853, 1016, 1093
MssI	GTTTAAAC	1 cut(s)	1419
MunI	CAATTG	4 cut(s)	90, 441, 1170, 1437
Mva1269I	GAATGC	2 cut(s)	230, 286
MvaI	CCWGG	3 cut(s)	704, 853, 1016
MwoI	GCNNNNNNNGC	6 cut(s)	43, 115, 652, 1398, 1664, 1667
NciI	CCSGG	2 cut(s)	387, 1093
NheI	GCTAGC	1 cut(s)	1388
NlaIV	GGNNCC	3 cut(s)	1161, 1446, 1527
NmeAIII	GCCGAG	1 cut(s)	415
NmuCI	GTSAC	1 cut(s)	1699
NsiI	ATGCAT	2 cut(s)	27, 232
NspI	RCATGY	3 cut(s)	170, 230, 548
NspV	TTCGAA	1 cut(s)	817
PaeI	GCATGC	1 cut(s)	548
PagI	TCATGA	2 cut(s)	874, 1819
PciSI	GCTCTTC	2 cut(s)	36, 754
PctI	GAATGC	2 cut(s)	230, 286
PdmI	GAANNNNTTC	1 cut(s)	882
PfeI	GAWTC	2 cut(s)	1723, 1790
PfoI	TCCNGGA	2 cut(s)	702, 1014
PleI	GAGTC	1 cut(s)	198
PmeI	GTTTAAAC	1 cut(s)	1419
PpsI	GAGTC	1 cut(s)	198
PpuMI	RGGWCCY	1 cut(s)	1445
PshBI	ATTAAT	1 cut(s)	743
Psp5II	RGGWCCY	1 cut(s)	1445
Psp6I	CCWGG	3 cut(s)	702, 851, 1014
PspFI	CCCAGC	1 cut(s)	1654
PspGI	CCWGG	3 cut(s)	702, 851, 1014
PspN4I	GGNNCC	3 cut(s)	1161, 1446, 1527
PspOMI	GGGCCC	1 cut(s)	1159
PspPI	GGNCC	5 cut(s)	79, 1159, 1160, 1445, 1648
PspPPI	RGGWCCY	1 cut(s)	1445
PsrI	GAACNNNNNNTAC	2 cut(s)	1079, 1111
PstI	CTGCAG	3 cut(s)	189, 376, 1196
PstNI	CAGNNNCTG	2 cut(s)	418, 1667
PsuI	RGATCY	5 cut(s)	136, 968, 1011, 1132, 1525
PvuII	CAGCTG	2 cut(s)	67, 1622
RsaI	GTAC	4 cut(s)	416, 996, 1427, 1472
RsaNI	GTAC	4 cut(s)	415, 995, 1426, 1471
RseI	CAYNNNNRTG	1 cut(s)	589
SalI	GTCGAC	1 cut(s)	810
SapI	GCTCTTC	2 cut(s)	36, 754
SaqAI	TTAA	5 cut(s)	96, 743, 1418, 1499, 1541
Sau96I	GGNCC	5 cut(s)	79, 1159, 1160, 1445, 1648
SchI	GAGTC	1 cut(s)	199
ScrFI	CCNGG	5 cut(s)	387, 704, 853, 1016, 1093
SduI	GDGCHC	4 cut(s)	381, 953, 1163, 1258
SfaNI	GCATC	4 cut(s)	12, 171, 370, 1717
SfcI	CTRYAG	4 cut(s)	185, 372, 1192, 1623
SfuI	TTCGAA	1 cut(s)	817
SinI	GGWCC	2 cut(s)	79, 1445
SmiMI	CAYNNNNRTG	1 cut(s)	589
SmlI	CTYRAG	1 cut(s)	1257
SmoI	CTYRAG	1 cut(s)	1257
SphI	GCATGC	1 cut(s)	548
SsiI	CCGC	3 cut(s)	619, 937, 1651
SspI	AATATT	2 cut(s)	741, 825
SspMI	CTAG	4 cut(s)	129, 1164, 1389, 1673
StyD4I	CCNGG	5 cut(s)	385, 702, 851, 1014, 1091
StyI	CCWWGG	2 cut(s)	550, 1672
TaaI	ACNGT	3 cut(s)	294, 1470, 1829
TaqI	TCGA	9 cut(s)	430, 672, 811, 817, 892, 1062, 1268, 1344, 1721
TatI	WGTACW	2 cut(s)	994, 1470
TauI	GCSGC	1 cut(s)	1653
TfiI	GAWTC	2 cut(s)	1723, 1790
Tru1I	TTAA	5 cut(s)	96, 743, 1418, 1499, 1541
Tru9I	TTAA	5 cut(s)	96, 743, 1418, 1499, 1541
TscAI	CASTG	6 cut(s)	381, 953, 1488, 1575, 1696, 1704
TseFI	GTSAC	1 cut(s)	1699
Tsp45I	GTSAC	1 cut(s)	1699
TspRI	CASTG	6 cut(s)	381, 953, 1488, 1575, 1696, 1704
VneI	GTGCAC	1 cut(s)	377
VpaK11BI	GGWCC	2 cut(s)	79, 1445
VspI	ATTAAT	1 cut(s)	743
XagI	CCTNNNNNAGG	1 cut(s)	1735
XapI	RAATTY	8 cut(s)	857, 879, 1459, 1477, 1501, 1507, 1550, 1762
XbaI	TCTAGA	1 cut(s)	128
XceI	RCATGY	3 cut(s)	170, 230, 548
XmaJI	CCTAGG	1 cut(s)	1672
XmiI	GTMKAC	4 cut(s)	811, 1051, 1088, 1626
XmnI	GAANNNNTTC	1 cut(s)	882
XspI	CTAG	4 cut(s)	129, 1164, 1389, 1673
Zsp2I	ATGCAT	2 cut(s)	27, 232

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.