Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0000883

Physical Location & Seq

Genomic Coordinates Reverse (-)

16257570 .. 16262529

Gene Structure 4960 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG185900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGATGCAGAATGCACTGAAAGAGTATCTGAATTCTAAGATGACCCGAAACTTTGCGCAGTCTGACAACTTATTGCAACATGACGCTCAGTATCAGGCTCTTGTAGCTTCTCTCTTGAATGGGAACTTGGCAGATGGTTCTTCCAAATTTCAGCAGACCTCACATTTGGATCAAAATCGCTTCCAGACACATAAAAGGAAGCAAGAAGAGCAATGTGTTTTCACTGCTAGTCCTCAGCTAGCATTGAAGGACCACAATCCACTTCTTAATGGTGTACAACAGGAACCTATTTCCGTATGGCGAAAGCATAAGAAAGCCAGACTGGATGTCAATCAAGAGGCTGTGAACGAGCATGTATTCCAGAAGATGCTGCAGAGTGAGAACTCTGCTGAATCGGAAAGAGATCAAATACGTGCATTTTTTCAGCATAATGTGATACCAAATCAAGATCAGCAAGCTATTTTGAATGCTGCTCCACAGTTGGGAATTGATAGAGAAAAGCAGCTGCAATGGATGAGGCACCCAGTTCCACAACAGGATATTGTGCATCAAGCAACTGCAATGCACGCAGTTCCACAACAGGAGAAGGTGCATCAAGCAACTGCAATGCACCAGCCTGGTGTTTGTTCACATCGGCTAATGCAGTACCTGTATCATACTCGAAGTCGGCCAAATGACAATAGCTTGGCCTATTGGAGGCAATTTGTGGCAGAGTTTTATGACCCCTGTGCCAAAAGAAGGTGGTGTTTGTCCTGCTATGATAAAGTTGGAGACCATGCCCTTGGTATTTCCCCCGACGCAGCTATGGTATCATCATGGCCGTGTGGCATATGTAATTGTCAATCAGGGCGGGGATTCGAGGTGAGTTTTGAAGTGCTTCCAAGGCTAAGTAAAGTAACATTTGAGGGTGGTGTGGTTGATGAACTCTTGTTCCTGGATTTGCCTCGTGAGAGTAGATTTTCTTCAGGATTATTGATGCTAGAATGTGGAAGAGCAGTTCAGAAAAGTGTCTATGAGCGGCTTCAAGTTGTTCATGAAGGTCGACTTCGTATAATTTTCTCTCCTAATTTGAAGATATTGTCCTGGGAATTTTGTACACGCTCTCATGAAATTTTTCTTCGTCGAACTTCTGTTGCACCTCAGGTTTCTGAGTTGGGTAGTGCTGTACGGAATTTTCAGTGCTCTATTGATGATAGAGAATCTAATGGACTTTCATCCCAAGATGTACAAGCTAGTTGCAATAAGATCCTGGAAGCAGGAGGACAAATTGAAAAAGCTTTGAATCTACATGAGGTCGATTATTTGGGATTTTCTAAGAAATACACTCGGTTCTTACAGATAGCTGATGTTGTTGATAGTATGAAAGATCTAATGACTTTATGTCATAATAAGGGCACTAGCCCACTTGAGAGCCTGAAGAGTTATTGCAGAGGAACTCCCACCAAGCTCCAAAAAAAGAAAATAAGAGGAAAGGGTCAAAAAGAGAGTGCTCAAGGTCTGCCGAAAGACGCGAATAAGTTGATGGCTACATCTTGTGGTCAAATAAAAAGTAATGCAAATCAAAGCTGCTCATCTATCAATACTGAAGGTTTCTCAAATGTGCCAGAATATAACCCCGTTGCGAGCAGCAGAGATAGCAAGTGGCAAACTAGTTTAAACCGGTACACTTCACCATTTGAGGGTCCTAAGACCTCAAATTCAGGACTGTATAGGAATTCAGATGGAAATGGCTTGTTAAATTCAAATTCCTCTATGCATAACTTAATACAGGAATTTATGAACAGCCGAGCAGTGAATAGGCATGACAGGGACGATGTCATCTGGGGAAGTGGGAAAAGTTCACCAGCGGTAGACGTGCCGTCAGGAGTTTGGGGCCGCCCAGCAGCTGCAGCTGCCCTAGGAAATGTTTTGGGCAGTATGCCAGAAAGGACCCGTCAATCGCACTCGAATGCTGCTGCCTTTACTAGGAACTTGTCTGAAGTCGGTGGCAGCTTTCATGGAAAGGTTTTATTACCGGAATCAGGCTGCAGTACATCTAATGGTTATCATGAGCACAGTAAGTTTTATGGCAATGATAGTAACCTGAACTATGGTTGGAAGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001666 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009909 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010154 GO:0010243 GO:0010272 GO:0014070 GO:0022414 GO:0032501 GO:0032502 GO:0033554 GO:0035670 GO:0036293 GO:0042221 GO:0042493 GO:0043207 GO:0046677 GO:0046898 GO:0046982 GO:0046983 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048580 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060090 GO:0060992 GO:0061458 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0090567 GO:0097159 GO:0097305 GO:0099402 GO:1901363 GO:1901654 GO:1901698 GO:1901700 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LIM_bind

Protein Analysis

701

Amino Acids

78.54

Weight (kDa)

8.81

Isoelectric Point (pI)

50.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LIM_bind	PF01803	212 - 473	7e-57	LIM-domain binding protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000883)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g08720 FvH4_3g22621 FvH4_4g11702 FvH4_5g01520 FvH4_5g01520 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g36380 FvH4_6g01730 FvH4_6g09170 FvH4_6g20010 FvH4_6g28113
malus_domestica	MD06G1073100.v1.1
prunus_persica	Prupe.2G067700_v2.0.a1 Prupe.5G091500_v2.0.a1 Prupe.5G091500_v2.0.a1 Prupe.5G091500_v2.0.a1 Prupe.7G013000_v2.0.a1
pyrus_communis	pycom01g10330 pycom06g07250
rosa_chinensis	RchiOBHm_Chr7g0199161 RchiOBHm_Chr7g0199171
rosa_laevigata	RLG00000003809 RLG00000014802
rosa_multiflora	Rmu_sc0004791.1_g000001 Rmu_sc0006115.1_g000003 Rmu_sc0037059.1_g000001
rosa_roxburghii	Rroxscaffold_1G00015450 Rroxscaffold_1G00015460 Rroxscaffold_3G00256990 Rroxscaffold_3G00257000 Rroxscaffold_4G00326050 Rroxscaffold_7G00182010
rosa_rugosa	Rorug03G0005500 Rorug03G0273000 Rorug05G0372800 Rorug05G0372900 Rorug07G0053100
rosa_samantha	Rh1BG202800 Rh1DG102500 Rh3AG101900 Rh3AG320900 Rh3CG107700 Rh3DG355100 Rh7AG176700 Rh7AG176800 Rh7AG365300 Rh7BG180300 Rh7CG185900 Rh7CG186000 Rh7CG384200 Rh7DG179700 Rh7DG179800
rosa_wichuraiana	Rw1G014270 Rw3G028010 Rw7G015540 Rw7G015550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	57
AccB1I	GGYRCC	1 cut(s)	519
AccBSI	CCGCTC	1 cut(s)	1018
AccI	GTMKAC	2 cut(s)	1042, 1851
AccII	CGCG	1 cut(s)	1511
AciI	CCGC	4 cut(s)	850, 1018, 1847, 1876
AclWI	GGATC	2 cut(s)	177, 1240
AcoI	YGGCCR	2 cut(s)	668, 818
AcuI	CTGAAG	4 cut(s)	948, 1436, 1605, 1998
AfaI	GTAC	7 cut(s)	276, 647, 1096, 1167, 1227, 1664, 2032
AfiI	CCNNNNNNNGG	6 cut(s)	482, 696, 738, 1679, 1965, 2021
AgeI	ACCGGT	1 cut(s)	1659
AgsI	TTSAA	9 cut(s)	118, 247, 466, 872, 1025, 1072, 1271, 1282, 1743
AhdI	GACNNNNNGTC	3 cut(s)	326, 1380, 1858
AhlI	ACTAGT	1 cut(s)	1649
AjiI	CACGTC	1 cut(s)	1855
AjnI	CCWGG	4 cut(s)	616, 933, 1082, 1248
AjuI	GAANNNNNNNTTGG	2 cut(s)	110, 142
AloI	GAACNNNNNNTCC	4 cut(s)	915, 947, 981, 1013
Alw21I	GWGCWC	3 cut(s)	1184, 1492, 2055
Alw26I	GTCTC	1 cut(s)	765
AlwI	GGATC	2 cut(s)	177, 1240
AlwNI	CAGNNNCTG	2 cut(s)	649, 1886
AoxI	GGCC	5 cut(s)	668, 687, 818, 1873, 2100
ArsI	GACNNNNNNTTYG	2 cut(s)	148, 180
AsiGI	ACCGGT	1 cut(s)	1659
Asp700I	GAANNNNTTC	2 cut(s)	876, 1113
AspA2I	CCTAGG	1 cut(s)	1897
AspLEI	GCGC	1 cut(s)	58
AspS9I	GGNCC	4 cut(s)	250, 1682, 1873, 1929
AsuHPI	GGTGA	3 cut(s)	874, 1662, 1833
AsuNHI	GCTAGC	1 cut(s)	238
AvaII	GGWCC	3 cut(s)	250, 1682, 1929
AvrII	CCTAGG	1 cut(s)	1897
AxyI	CCTNAGG	1 cut(s)	1140
BaeGI	GKGCMC	1 cut(s)	1397
BanI	GGYRCC	1 cut(s)	519
BarI	GAAGNNNNNNTAC	2 cut(s)	946, 978
BauI	CACGAG	1 cut(s)	945
Bbv12I	GWGCWC	3 cut(s)	1184, 1492, 2055
BbvCI	CCTCAGC	1 cut(s)	234
BccI	CCATC	3 cut(s)	128, 1516, 1715
BceAI	ACGGC	2 cut(s)	805, 1843
BciT130I	CCWGG	4 cut(s)	618, 935, 1084, 1250
BcoDI	GTCTC	1 cut(s)	765
BcuI	ACTAGT	1 cut(s)	1649
BfaI	CTAG	8 cut(s)	228, 239, 980, 1233, 1398, 1650, 1898, 1965
BfmI	CTRYAG	3 cut(s)	371, 1887, 2026
BglII	AGATCT	1 cut(s)	1366
BlnI	CCTAGG	1 cut(s)	1897
Bme1390I	CCNGG	4 cut(s)	618, 935, 1084, 1250
Bme18I	GGWCC	3 cut(s)	250, 1682, 1929
BmeRI	GACNNNNNGTC	3 cut(s)	326, 1380, 1858
BmgBI	CACGTC	1 cut(s)	1855
BmgT120I	GGNCC	4 cut(s)	250, 1682, 1873, 1929
BmiI	GGNNCC	5 cut(s)	285, 521, 1683, 1874, 1931
BmrFI	CCNGG	4 cut(s)	618, 935, 1084, 1250
BmrI	ACTGGG	1 cut(s)	518
BmsI	GCATC	4 cut(s)	357, 556, 601, 966
BmtI	GCTAGC	1 cut(s)	242
BmuI	ACTGGG	1 cut(s)	518
Bpu10I	CCTNAGC	1 cut(s)	234
BpuEI	CTTGAG	2 cut(s)	1427, 1476
BsaAI	YACGTR	1 cut(s)	413
BsaBI	GATNNNNATC	2 cut(s)	174, 330
BsaI	GGTCTC	1 cut(s)	765
BsaJI	CCNNGG	4 cut(s)	781, 881, 1083, 1897
BsaWI	WCCGGW	2 cut(s)	1659, 2014
Bsc4I	CCNNNNNNNGG	6 cut(s)	482, 696, 738, 1679, 1965, 2021
Bse118I	RCCGGY	1 cut(s)	1659
Bse1I	ACTGG	2 cut(s)	327, 524
Bse21I	CCTNAGG	1 cut(s)	1140
Bse3DI	GCAATG	5 cut(s)	218, 515, 567, 612, 2077
Bse8I	GATNNNNATC	2 cut(s)	174, 330
BseBI	CCWGG	4 cut(s)	618, 935, 1084, 1250
BseDI	CCNNGG	4 cut(s)	781, 881, 1083, 1897
BseGI	GGATG	3 cut(s)	331, 519, 1214
BseJI	GATNNNNATC	2 cut(s)	174, 330
BseLI	CCNNNNNNNGG	6 cut(s)	482, 696, 738, 1679, 1965, 2021
BseMI	GCAATG	5 cut(s)	218, 515, 567, 612, 2077
BseMII	CTCAG	4 cut(s)	101, 248, 1140, 1154
BseNI	ACTGG	2 cut(s)	327, 524
BseSI	GKGCMC	1 cut(s)	1397
BseYI	CCCAGC	1 cut(s)	1879
Bsh1236I	CGCG	1 cut(s)	1511
BshFI	GGCC	5 cut(s)	670, 689, 820, 1875, 2102
BshNI	GGYRCC	1 cut(s)	519
BshTI	ACCGGT	1 cut(s)	1659
BsiHKAI	GWGCWC	3 cut(s)	1184, 1492, 2055
BsiSI	CCGG	2 cut(s)	1660, 2015
BslFI	GGGAC	1 cut(s)	1823
BslI	CCNNNNNNNGG	6 cut(s)	482, 696, 738, 1679, 1965, 2021
BsmAI	GTCTC	1 cut(s)	765
BsmFI	GGGAC	1 cut(s)	1823
BsmI	GAATGC	3 cut(s)	16, 472, 1954
BsnI	GGCC	5 cut(s)	670, 689, 820, 1875, 2102
Bso31I	GGTCTC	1 cut(s)	765
Bsp1286I	GDGCHC	4 cut(s)	1184, 1397, 1492, 2055
Bsp1407I	TGTACA	3 cut(s)	274, 1094, 1225
Bsp143I	GATC	5 cut(s)	169, 403, 448, 1245, 1366
BspACI	CCGC	4 cut(s)	850, 1018, 1847, 1876
BspANI	GGCC	5 cut(s)	670, 689, 820, 1875, 2102
BspCNI	CTCAG	4 cut(s)	100, 247, 1141, 1153
BspFNI	CGCG	1 cut(s)	1511
BspHI	TCATGA	3 cut(s)	1033, 1105, 2047
BspLI	GGNNCC	5 cut(s)	285, 521, 1683, 1874, 1931
BspMAI	CTGCAG	3 cut(s)	375, 1891, 2030
BspOI	GCTAGC	1 cut(s)	242
BspPI	GGATC	2 cut(s)	177, 1240
BspQI	GCTCTTC	2 cut(s)	201, 985
BspT107I	GGYRCC	1 cut(s)	519
BspTNI	GGTCTC	1 cut(s)	765
BsrBI	CCGCTC	1 cut(s)	1018
BsrDI	GCAATG	5 cut(s)	218, 515, 567, 612, 2077
BsrFI	RCCGGY	1 cut(s)	1659
BsrGI	TGTACA	3 cut(s)	274, 1094, 1225
BsrI	ACTGG	2 cut(s)	327, 524
BssAI	RCCGGY	1 cut(s)	1659
BssECI	CCNNGG	4 cut(s)	781, 881, 1083, 1897
BssMI	GATC	5 cut(s)	169, 403, 448, 1245, 1366
BssSI	CACGAG	1 cut(s)	945
BssT1I	CCWWGG	3 cut(s)	781, 881, 1897
Bst2BI	CACGAG	1 cut(s)	945
Bst2UI	CCWGG	4 cut(s)	618, 935, 1084, 1250
Bst4CI	ACNGT	3 cut(s)	480, 1707, 2057
Bst6I	CTCTTC	3 cut(s)	201, 985, 1412
BstAUI	TGTACA	3 cut(s)	274, 1094, 1225
BstBAI	YACGTR	1 cut(s)	413
BstC8I	GCNNGC	4 cut(s)	240, 456, 567, 1624
BstDEI	CTNAG	8 cut(s)	36, 87, 234, 887, 1140, 1149, 1314, 1686
BstENI	CCTNNNNNAGG	2 cut(s)	694, 1963
BstF5I	GGATG	3 cut(s)	331, 519, 1214
BstFNI	CGCG	1 cut(s)	1511
BstHHI	GCGC	1 cut(s)	58
BstKTI	GATC	5 cut(s)	172, 406, 451, 1248, 1369
BstMAI	GTCTC	1 cut(s)	765
BstMBI	GATC	5 cut(s)	169, 403, 448, 1245, 1366
BstMWI	GCNNNNNNNGC	7 cut(s)	104, 208, 566, 883, 1635, 1889, 1892
BstNI	CCWGG	4 cut(s)	618, 935, 1084, 1250
BstNSI	RCATGY	1 cut(s)	356
BstSCI	CCNGG	4 cut(s)	616, 933, 1082, 1248
BstSFI	CTRYAG	3 cut(s)	371, 1887, 2026
BstSLI	GKGCMC	1 cut(s)	1397
BstUI	CGCG	1 cut(s)	1511
BstX2I	RGATCY	2 cut(s)	1245, 1366
BstXI	CCANNNNNNTGG	1 cut(s)	782
BstYI	RGATCY	2 cut(s)	1245, 1366
Bsu36I	CCTNAGG	1 cut(s)	1140
BsuRI	GGCC	5 cut(s)	670, 689, 820, 1875, 2102
BtrI	CACGTC	1 cut(s)	1855
BtsCI	GGATG	3 cut(s)	331, 519, 1214
BtsI	GCAGTG	2 cut(s)	222, 1797
BtsIMutI	CAGTG	4 cut(s)	14, 222, 1184, 1797
Cac8I	GCNNGC	4 cut(s)	240, 456, 567, 1624
CaiI	CAGNNNCTG	2 cut(s)	649, 1886
CciI	TCATGA	3 cut(s)	1033, 1105, 2047
CfoI	GCGC	1 cut(s)	58
Cfr10I	RCCGGY	1 cut(s)	1659
Cfr13I	GGNCC	4 cut(s)	250, 1682, 1873, 1929
CseI	GACGC	3 cut(s)	92, 806, 1517
Csp6I	GTAC	7 cut(s)	275, 646, 1095, 1166, 1226, 1663, 2031
CspAI	ACCGGT	1 cut(s)	1659
CviQI	GTAC	7 cut(s)	275, 646, 1095, 1166, 1226, 1663, 2031
DdeI	CTNAG	8 cut(s)	36, 87, 234, 887, 1140, 1149, 1314, 1686
DpnI	GATC	5 cut(s)	171, 405, 450, 1247, 1368
DpnII	GATC	5 cut(s)	169, 403, 448, 1245, 1366
DraI	TTTAAA	1 cut(s)	1656
DriI	GACNNNNNGTC	3 cut(s)	326, 1380, 1858
EaeI	YGGCCR	2 cut(s)	668, 818
Eam1104I	CTCTTC	3 cut(s)	201, 985, 1412
Eam1105I	GACNNNNNGTC	3 cut(s)	326, 1380, 1858
EarI	CTCTTC	3 cut(s)	201, 985, 1412
Eco130I	CCWWGG	3 cut(s)	781, 881, 1897
Eco147I	AGGCCT	1 cut(s)	2102
Eco31I	GGTCTC	1 cut(s)	765
Eco47I	GGWCC	3 cut(s)	250, 1682, 1929
Eco57I	CTGAAG	4 cut(s)	948, 1436, 1605, 1998
Eco81I	CCTNAGG	1 cut(s)	1140
EcoNI	CCTNNNNNAGG	2 cut(s)	694, 1963
EcoO109I	RGGNCCY	2 cut(s)	1682, 1929
EcoRI	GAATTC	2 cut(s)	31, 1714
EcoRII	CCWGG	4 cut(s)	616, 933, 1082, 1248
EcoT14I	CCWWGG	3 cut(s)	781, 881, 1897
EcoT22I	ATGCAT	1 cut(s)	1758
ErhI	CCWWGG	3 cut(s)	781, 881, 1897
FalI	AAGNNNNNCTT	2 cut(s)	1029, 1061
FaqI	GGGAC	1 cut(s)	1823
FauI	CCCGC	1 cut(s)	843
FauNDI	CATATG	1 cut(s)	830
FblI	GTMKAC	2 cut(s)	1042, 1851
FokI	GGATG	3 cut(s)	338, 526, 1201
FspBI	CTAG	8 cut(s)	228, 239, 980, 1233, 1398, 1650, 1898, 1965
FspI	TGCGCA	1 cut(s)	57
GlaI	GCGC	1 cut(s)	57
GsaI	CCCAGC	1 cut(s)	1883
HaeIII	GGCC	5 cut(s)	670, 689, 820, 1875, 2102
HapII	CCGG	2 cut(s)	1660, 2015
HgaI	GACGC	3 cut(s)	92, 806, 1517
HhaI	GCGC	1 cut(s)	58
Hin6I	GCGC	1 cut(s)	56
HinP1I	GCGC	1 cut(s)	56
HincII	GTYRAC	1 cut(s)	1043
HindII	GTYRAC	1 cut(s)	1043
HindIII	AAGCTT	1 cut(s)	1275
HinfI	GANTC	5 cut(s)	392, 855, 1199, 1282, 2018
HpaII	CCGG	2 cut(s)	1660, 2015
HphI	GGTGA	3 cut(s)	874, 1662, 1833
Hpy166II	GTNNAC	8 cut(s)	275, 346, 629, 1043, 1097, 1665, 1841, 1852
Hpy188I	TCNGA	7 cut(s)	30, 64, 397, 1002, 1150, 1720, 1978
Hpy8I	GTNNAC	8 cut(s)	275, 346, 629, 1043, 1097, 1665, 1841, 1852
Hpy99I	CGWCG	2 cut(s)	800, 1125
HpyAV	CCTTC	6 cut(s)	241, 580, 732, 1031, 1580, 2092
HpyCH4III	ACNGT	3 cut(s)	480, 1707, 2057
HpyCH4IV	ACGT	2 cut(s)	412, 1854
HpyF10VI	GCNNNNNNNGC	7 cut(s)	104, 208, 566, 883, 1635, 1889, 1892
HpyF3I	CTNAG	8 cut(s)	36, 87, 234, 887, 1140, 1149, 1314, 1686
HpySE526I	ACGT	2 cut(s)	412, 1854
HspAI	GCGC	1 cut(s)	56
Kzo9I	GATC	5 cut(s)	169, 403, 448, 1245, 1366
LguI	GCTCTTC	2 cut(s)	201, 985
LmnI	GCTCC	2 cut(s)	478, 1452
LweI	GCATC	4 cut(s)	357, 556, 601, 966
MaeI	CTAG	8 cut(s)	228, 239, 980, 1233, 1398, 1650, 1898, 1965
MaeII	ACGT	2 cut(s)	412, 1854
MaeIII	GTNAC	2 cut(s)	895, 2078
MalI	GATC	5 cut(s)	171, 405, 450, 1247, 1368
MbiI	CCGCTC	1 cut(s)	1018
MboI	GATC	5 cut(s)	169, 403, 448, 1245, 1366
MboII	GAAGA	8 cut(s)	132, 218, 376, 954, 1002, 1084, 1109, 1429
MflI	RGATCY	2 cut(s)	1245, 1366
MhlI	GDGCHC	4 cut(s)	1184, 1397, 1492, 2055
MmeI	TCCRAC	2 cut(s)	748, 2075
Mph1103I	ATGCAT	1 cut(s)	1758
MroXI	GAANNNNTTC	2 cut(s)	876, 1113
MseI	TTAA	4 cut(s)	267, 1655, 1736, 1763
MslI	CAYNNNNRTG	2 cut(s)	820, 1947
MspA1I	CMGCKG	4 cut(s)	505, 1847, 1886, 1892
MspI	CCGG	2 cut(s)	1660, 2015
MspR9I	CCNGG	4 cut(s)	618, 935, 1084, 1250
MssI	GTTTAAAC	1 cut(s)	1656
Mva1269I	GAATGC	3 cut(s)	16, 472, 1954
MvaI	CCWGG	4 cut(s)	618, 935, 1084, 1250
MvnI	CGCG	1 cut(s)	1511
MwoI	GCNNNNNNNGC	7 cut(s)	104, 208, 566, 883, 1635, 1889, 1892
NdeI	CATATG	1 cut(s)	830
NdeII	GATC	5 cut(s)	169, 403, 448, 1245, 1366
NheI	GCTAGC	1 cut(s)	238
NlaIV	GGNNCC	5 cut(s)	285, 521, 1683, 1874, 1931
NmeAIII	GCCGAG	1 cut(s)	1811
NsbI	TGCGCA	1 cut(s)	57
NsiI	ATGCAT	1 cut(s)	1758
NspI	RCATGY	1 cut(s)	356
PagI	TCATGA	3 cut(s)	1033, 1105, 2047
PceI	AGGCCT	1 cut(s)	2102
PciSI	GCTCTTC	2 cut(s)	201, 985
PctI	GAATGC	3 cut(s)	16, 472, 1954
PdmI	GAANNNNTTC	2 cut(s)	876, 1113
PfeI	GAWTC	5 cut(s)	392, 855, 1199, 1282, 2018
PflFI	GACNNNGTC	1 cut(s)	1814
PfoI	TCCNGGA	2 cut(s)	933, 1248
PinAI	ACCGGT	1 cut(s)	1659
PmeI	GTTTAAAC	1 cut(s)	1656
Ppu21I	YACGTR	1 cut(s)	413
PpuMI	RGGWCCY	2 cut(s)	1682, 1929
Psp5II	RGGWCCY	2 cut(s)	1682, 1929
Psp6I	CCWGG	4 cut(s)	616, 933, 1082, 1248
PspFI	CCCAGC	1 cut(s)	1879
PspGI	CCWGG	4 cut(s)	616, 933, 1082, 1248
PspN4I	GGNNCC	5 cut(s)	285, 521, 1683, 1874, 1931
PspPI	GGNCC	4 cut(s)	250, 1682, 1873, 1929
PspPPI	RGGWCCY	2 cut(s)	1682, 1929
PstI	CTGCAG	3 cut(s)	375, 1891, 2030
PstNI	CAGNNNCTG	2 cut(s)	649, 1886
PsuI	RGATCY	2 cut(s)	1245, 1366
PsyI	GACNNNGTC	1 cut(s)	1814
PvuII	CAGCTG	3 cut(s)	505, 1886, 1892
RsaI	GTAC	7 cut(s)	276, 647, 1096, 1167, 1227, 1664, 2032
RsaNI	GTAC	7 cut(s)	275, 646, 1095, 1166, 1226, 1663, 2031
RseI	CAYNNNNRTG	2 cut(s)	820, 1947
SalI	GTCGAC	1 cut(s)	1041
SapI	GCTCTTC	2 cut(s)	201, 985
SaqAI	TTAA	4 cut(s)	267, 1655, 1736, 1763
Sau3AI	GATC	5 cut(s)	169, 403, 448, 1245, 1366
Sau96I	GGNCC	4 cut(s)	250, 1682, 1873, 1929
ScrFI	CCNGG	4 cut(s)	618, 935, 1084, 1250
SduI	GDGCHC	4 cut(s)	1184, 1397, 1492, 2055
SfaNI	GCATC	4 cut(s)	357, 556, 601, 966
SfcI	CTRYAG	3 cut(s)	371, 1887, 2026
SinI	GGWCC	3 cut(s)	250, 1682, 1929
SmiMI	CAYNNNNRTG	2 cut(s)	820, 1947
SmlI	CTYRAG	2 cut(s)	1406, 1491
SmoI	CTYRAG	2 cut(s)	1406, 1491
SpeI	ACTAGT	1 cut(s)	1649
SseBI	AGGCCT	1 cut(s)	2102
SsiI	CCGC	4 cut(s)	850, 1018, 1847, 1876
SspMI	CTAG	8 cut(s)	228, 239, 980, 1233, 1398, 1650, 1898, 1965
StuI	AGGCCT	1 cut(s)	2102
StyD4I	CCNGG	4 cut(s)	616, 933, 1082, 1248
StyI	CCWWGG	3 cut(s)	781, 881, 1897
TaaI	ACNGT	3 cut(s)	480, 1707, 2057
TaiI	ACGT	2 cut(s)	415, 1857
TaqI	TCGA	6 cut(s)	661, 858, 1042, 1123, 1296, 1946
TatI	WGTACW	4 cut(s)	274, 1094, 1225, 2030
TauI	GCSGC	2 cut(s)	1021, 1878
TfiI	GAWTC	5 cut(s)	392, 855, 1199, 1282, 2018
Tru1I	TTAA	4 cut(s)	267, 1655, 1736, 1763
Tru9I	TTAA	4 cut(s)	267, 1655, 1736, 1763
TscAI	CASTG	4 cut(s)	21, 229, 1184, 1797
TspDTI	ATGAA	8 cut(s)	936, 1022, 1050, 1122, 1203, 1376, 1793, 1985
TspGWI	ACGGA	2 cut(s)	283, 1183
TspRI	CASTG	4 cut(s)	21, 229, 1184, 1797
Tth111I	GACNNNGTC	1 cut(s)	1814
VpaK11BI	GGWCC	3 cut(s)	250, 1682, 1929
XagI	CCTNNNNNAGG	2 cut(s)	694, 1963
XceI	RCATGY	1 cut(s)	356
XmaJI	CCTAGG	1 cut(s)	1897
XmiI	GTMKAC	2 cut(s)	1042, 1851
XmnI	GAANNNNTTC	2 cut(s)	876, 1113
XspI	CTAG	8 cut(s)	228, 239, 980, 1233, 1398, 1650, 1898, 1965
Zsp2I	ATGCAT	1 cut(s)	1758

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.