Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0000883

Physical Location & Seq

Genomic Coordinates Forward (+)

51425568 .. 51431439

Gene Structure 5872 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00257000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGACTAAAACATCTGGAATGCCAAAGCTGATTACAACCTCCATGATGCAGAATGCACTGAAAGAGTATCTGAATTCTAAGATGACCGGAAATTTTGCGCAGTCTGACAACGTATTGCAACATGACGCGCAGTATCAGGCTCTTGTAGCTTCTCTCTTGAATGGGAACTTGGCAGATGGTTCTTCCAAATTTCAGCAGACCTCACATTTGGATCAAAATCGCTCCCAGACACATAAAAGGAAGCAAGAAGAACAATGTGTTTTCACTGCTAGTCCTCAGCTAGCATTGAAGGACCACAATCCACTTCTTAATGGTGGACAACAGGAACCTATTTCCGTATGGCGAAAGCATAAGAAAGCTAGACTGGATGTCAATCAAGAGGCTGTGAACGAGCATGTATTCCAGAAGATGCTGCAGAGTGAGAACTCTGCTGAATCGGAAAGAGATCAAATACGTGCATTTTTTCAGCATAATGTGATACCAAATCAAGATCAGCAAGCTATTTTGAATGCTGCTCCACAGTTGGGAATTGATAGAGAAAAGCAGCTGCAATGGATGAGGCACCCAGTTCCACAACAGGAGATGGTGCATCAAGCAACTGAAATGCACGCAGTTCCACAACAGGAGAAGGTGCATCAGGCAACTGCAATGCACCAGCCTGGTGTTTGTTCACATCGGCTAATGCAGTACCTGTATCATACTCGAACTCGGCCAAATGTGAGTTTCGAAGTACTTCCAAGGCTAAGTAAAGTAACATTTGAGGGTGGTGTGGTTGATGAACTCTTGTTCCTGGATTTGCCTCGTGAGAGTAGATTTTCTTCAGGATTATTGATGCTAGAATGTGGAAGAGCAGTTCAGAAAAGTGTCTATGAGCGGCTTCAAGTTGTTCATGAAGGTCGACTTCGTATAATTTTCTCTCCTAATTTGAAGATATTGTCCTGGGAATTTTGTATACGCTCTCATGAAATTTTTCTTCGTCGAACTTCTGTTGCACCTCAGGTTTCTGAGTTGGGTAGTGCTGTACGGAATTATCAGTGCTCCATTGATGATAGAGAATCTAATGGACTTTCATCCCAAGATGTACAAGCTAGTTGCAATAAAGAGCCTGAAGAGTTATTGCAGAGGAACTCCCACCAAGCTCCAAAAAAGAAAATAAGAGGAAAGGGTCAAAAAGAGAGTGCTCAAGGTCTGCCGAAAGACGCGAATAAGTTGATGGTGATGGCTACATCTTGTGGTCAAATAAAAAGTAATGCAAGTCAAAGCTGCTCATCTATCAATACTGAAGGTTTCTCAAATGTGCCAGAATATAACCCCGTTGCGAGCAGAGATAGCAAGTGGCAAACTAGTTTAAACCGGTACACTTCACCATTTGAGGGTCCTAAGACCTCAAATTCAGGACTGTATAAGAATTCAGTGGGAAATGGCTTGTTAAATTCAAATTCCTCTATGCAGCAGGATGCTATGCATAACTTAATACAGGAATTTATGAACAGCCGAGCAGTGAATAGGCATGACAGGGACGAAGTCATCTGGGGAAGTGGGAAAAGTTCAGCCGTAGACATGCCGTCAGGAGTTTGGGGCCGCCCAGCAGCTGCAGCTGCCCTAGGAAATGTTTTGGGCAGTGTGCCAGTAAGGACCCGTCAATCGCACTCGAATGCTGCCTTTACTAGGAACTTGTCTGAAGTCGGTGGCAGTTTTCATGGAAAGGTTTTATTACCGGAATCAGGCTTCAGTACATCTAATGGTTATCATGATCACAATAAGTTTTATGGCAATGATAGTAACCTGAACAATGGTTGGAAGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001666 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009909 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010154 GO:0010243 GO:0010272 GO:0014070 GO:0022414 GO:0032501 GO:0032502 GO:0033554 GO:0035670 GO:0036293 GO:0042221 GO:0042493 GO:0043207 GO:0046677 GO:0046898 GO:0046982 GO:0046983 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048580 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060090 GO:0060992 GO:0061458 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0090567 GO:0097159 GO:0097305 GO:0099402 GO:1901363 GO:1901654 GO:1901698 GO:1901700 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LIM_bind

Protein Analysis

602

Amino Acids

67.34

Weight (kDa)

9.07

Isoelectric Point (pI)

51.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LIM_bind	PF01803	240 - 413	1.5e-27	LIM-domain binding protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000883)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g08720 FvH4_3g22621 FvH4_4g11702 FvH4_5g01520 FvH4_5g01520 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g01530 FvH4_5g36380 FvH4_6g01730 FvH4_6g09170 FvH4_6g20010 FvH4_6g28113
malus_domestica	MD06G1073100.v1.1
prunus_persica	Prupe.2G067700_v2.0.a1 Prupe.5G091500_v2.0.a1 Prupe.5G091500_v2.0.a1 Prupe.5G091500_v2.0.a1 Prupe.7G013000_v2.0.a1
pyrus_communis	pycom01g10330 pycom06g07250
rosa_chinensis	RchiOBHm_Chr7g0199161 RchiOBHm_Chr7g0199171
rosa_laevigata	RLG00000003809 RLG00000014802
rosa_multiflora	Rmu_sc0004791.1_g000001 Rmu_sc0006115.1_g000003 Rmu_sc0037059.1_g000001
rosa_roxburghii	Rroxscaffold_1G00015450 Rroxscaffold_1G00015460 Rroxscaffold_3G00256990 Rroxscaffold_3G00257000 Rroxscaffold_4G00326050 Rroxscaffold_7G00182010
rosa_rugosa	Rorug03G0005500 Rorug03G0273000 Rorug05G0372800 Rorug05G0372900 Rorug07G0053100
rosa_samantha	Rh1BG202800 Rh1DG102500 Rh3AG101900 Rh3AG320900 Rh3CG107700 Rh3DG355100 Rh7AG176700 Rh7AG176800 Rh7AG365300 Rh7BG180300 Rh7CG185900 Rh7CG186000 Rh7CG384200 Rh7DG179700 Rh7DG179800
rosa_wichuraiana	Rw1G014270 Rw3G028010 Rw7G015540 Rw7G015550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	99
AccB1I	GGYRCC	1 cut(s)	561
AccBSI	CCGCTC	1 cut(s)	874
AccI	GTMKAC	3 cut(s)	898, 952, 1557
AccII	CGCG	2 cut(s)	128, 1202
AciI	CCGC	2 cut(s)	874, 1582
AclWI	GGATC	1 cut(s)	219
AcoI	YGGCCR	1 cut(s)	710
AcuI	CTGAAG	5 cut(s)	804, 1128, 1302, 1701, 1714
AfaI	GTAC	6 cut(s)	689, 732, 1023, 1083, 1358, 1735
AfiI	CCNNNNNNNGG	4 cut(s)	524, 1373, 1668, 1724
AgeI	ACCGGT	1 cut(s)	1353
AgsI	TTSAA	6 cut(s)	160, 289, 508, 881, 928, 1437
AhdI	GACNNNNNGTC	2 cut(s)	368, 1564
AhlI	ACTAGT	1 cut(s)	1343
AjnI	CCWGG	3 cut(s)	658, 789, 938
AjuI	GAANNNNNNNTTGG	2 cut(s)	152, 184
AloI	GAACNNNNNNTCC	4 cut(s)	771, 803, 837, 869
Alw21I	GWGCWC	2 cut(s)	1040, 1183
AlwI	GGATC	1 cut(s)	219
AlwNI	CAGNNNCTG	2 cut(s)	691, 1592
AoxI	GGCC	3 cut(s)	710, 1579, 1803
ArsI	GACNNNNNNTTYG	2 cut(s)	190, 222
AsiGI	ACCGGT	1 cut(s)	1353
Asp700I	GAANNNNTTC	2 cut(s)	732, 969
AspA2I	CCTAGG	1 cut(s)	1603
AspLEI	GCGC	2 cut(s)	100, 130
AspS9I	GGNCC	4 cut(s)	292, 1376, 1579, 1635
AsuHPI	GGTGA	2 cut(s)	1228, 1356
AsuII	TTCGAA	1 cut(s)	726
AsuNHI	GCTAGC	1 cut(s)	280
AvaII	GGWCC	3 cut(s)	292, 1376, 1635
AvrII	CCTAGG	1 cut(s)	1603
AxyI	CCTNAGG	1 cut(s)	996
BanI	GGYRCC	1 cut(s)	561
BarI	GAAGNNNNNNTAC	2 cut(s)	802, 834
BauI	CACGAG	1 cut(s)	801
Bbv12I	GWGCWC	2 cut(s)	1040, 1183
BbvCI	CCTCAGC	1 cut(s)	276
BccI	CCATC	4 cut(s)	170, 577, 1207, 1213
BceAI	ACGGC	2 cut(s)	1538, 1549
BciT130I	CCWGG	3 cut(s)	660, 791, 940
BclI	TGATCA	1 cut(s)	1753
BcuI	ACTAGT	1 cut(s)	1343
BfaI	CTAG	8 cut(s)	270, 281, 360, 836, 1089, 1344, 1604, 1668
BfmI	CTRYAG	2 cut(s)	413, 1593
BlnI	CCTAGG	1 cut(s)	1603
BmcAI	AGTACT	1 cut(s)	732
Bme1390I	CCNGG	3 cut(s)	660, 791, 940
Bme18I	GGWCC	3 cut(s)	292, 1376, 1635
BmeRI	GACNNNNNGTC	2 cut(s)	368, 1564
BmgT120I	GGNCC	4 cut(s)	292, 1376, 1579, 1635
BmiI	GGNNCC	5 cut(s)	327, 563, 1377, 1580, 1637
BmrFI	CCNGG	3 cut(s)	660, 791, 940
BmrI	ACTGGG	1 cut(s)	560
BmsI	GCATC	6 cut(s)	36, 399, 598, 643, 822, 1447
BmtI	GCTAGC	1 cut(s)	284
BmuI	ACTGGG	1 cut(s)	560
Bpu10I	CCTNAGC	1 cut(s)	276
Bpu14I	TTCGAA	1 cut(s)	726
BpuEI	CTTGAG	1 cut(s)	1167
BsaAI	YACGTR	1 cut(s)	455
BsaBI	GATNNNNATC	2 cut(s)	216, 372
BsaJI	CCNNGG	3 cut(s)	737, 939, 1603
BsaWI	WCCGGW	3 cut(s)	86, 1353, 1717
Bsc4I	CCNNNNNNNGG	4 cut(s)	524, 1373, 1668, 1724
Bse118I	RCCGGY	1 cut(s)	1353
Bse1I	ACTGG	3 cut(s)	369, 566, 1628
Bse21I	CCTNAGG	1 cut(s)	996
Bse3DI	GCAATG	3 cut(s)	557, 654, 1780
Bse8I	GATNNNNATC	2 cut(s)	216, 372
BseBI	CCWGG	3 cut(s)	660, 791, 940
BseDI	CCNNGG	3 cut(s)	737, 939, 1603
BseGI	GGATG	4 cut(s)	373, 561, 1070, 1462
BseJI	GATNNNNATC	2 cut(s)	216, 372
BseLI	CCNNNNNNNGG	4 cut(s)	524, 1373, 1668, 1724
BseMI	GCAATG	3 cut(s)	557, 654, 1780
BseMII	CTCAG	3 cut(s)	290, 996, 1010
BseNI	ACTGG	3 cut(s)	369, 566, 1628
BseYI	CCCAGC	1 cut(s)	1585
Bsh1236I	CGCG	2 cut(s)	128, 1202
BshFI	GGCC	3 cut(s)	712, 1581, 1805
BshNI	GGYRCC	1 cut(s)	561
BshTI	ACCGGT	1 cut(s)	1353
BsiHKAI	GWGCWC	2 cut(s)	1040, 1183
BsiSI	CCGG	3 cut(s)	87, 1354, 1718
BslFI	GGGAC	1 cut(s)	1532
BslI	CCNNNNNNNGG	4 cut(s)	524, 1373, 1668, 1724
BsmFI	GGGAC	1 cut(s)	1532
BsmI	GAATGC	4 cut(s)	24, 58, 514, 1660
BsnI	GGCC	3 cut(s)	712, 1581, 1805
Bsp119I	TTCGAA	1 cut(s)	726
Bsp1286I	GDGCHC	2 cut(s)	1040, 1183
Bsp1407I	TGTACA	1 cut(s)	1081
Bsp143I	GATC	4 cut(s)	211, 445, 490, 1753
BspACI	CCGC	2 cut(s)	874, 1582
BspANI	GGCC	3 cut(s)	712, 1581, 1805
BspCNI	CTCAG	3 cut(s)	289, 997, 1009
BspFNI	CGCG	2 cut(s)	128, 1202
BspHI	TCATGA	3 cut(s)	889, 961, 1750
BspLI	GGNNCC	5 cut(s)	327, 563, 1377, 1580, 1637
BspMAI	CTGCAG	2 cut(s)	417, 1597
BspOI	GCTAGC	1 cut(s)	284
BspPI	GGATC	1 cut(s)	219
BspQI	GCTCTTC	1 cut(s)	841
BspT104I	TTCGAA	1 cut(s)	726
BspT107I	GGYRCC	1 cut(s)	561
BsrBI	CCGCTC	1 cut(s)	874
BsrDI	GCAATG	3 cut(s)	557, 654, 1780
BsrFI	RCCGGY	1 cut(s)	1353
BsrGI	TGTACA	1 cut(s)	1081
BsrI	ACTGG	3 cut(s)	369, 566, 1628
BssAI	RCCGGY	1 cut(s)	1353
BssECI	CCNNGG	3 cut(s)	737, 939, 1603
BssMI	GATC	4 cut(s)	211, 445, 490, 1753
BssNAI	GTATAC	1 cut(s)	953
BssSI	CACGAG	1 cut(s)	801
BssT1I	CCWWGG	2 cut(s)	737, 1603
Bst1107I	GTATAC	1 cut(s)	953
Bst2BI	CACGAG	1 cut(s)	801
Bst2UI	CCWGG	3 cut(s)	660, 791, 940
Bst4CI	ACNGT	2 cut(s)	522, 1401
Bst6I	CTCTTC	2 cut(s)	841, 1104
BstAUI	TGTACA	1 cut(s)	1081
BstBAI	YACGTR	1 cut(s)	455
BstBI	TTCGAA	1 cut(s)	726
BstC8I	GCNNGC	4 cut(s)	282, 498, 609, 1321
BstDEI	CTNAG	6 cut(s)	78, 276, 743, 996, 1005, 1380
BstENI	CCTNNNNNAGG	1 cut(s)	1666
BstF5I	GGATG	4 cut(s)	373, 561, 1070, 1462
BstFNI	CGCG	2 cut(s)	128, 1202
BstHHI	GCGC	2 cut(s)	100, 130
BstKTI	GATC	4 cut(s)	214, 448, 493, 1756
BstMBI	GATC	4 cut(s)	211, 445, 490, 1753
BstMWI	GCNNNNNNNGC	4 cut(s)	146, 1329, 1595, 1598
BstNI	CCWGG	3 cut(s)	660, 791, 940
BstNSI	RCATGY	2 cut(s)	398, 1564
BstSCI	CCNGG	3 cut(s)	658, 789, 938
BstSFI	CTRYAG	2 cut(s)	413, 1593
BstUI	CGCG	2 cut(s)	128, 1202
BstZ17I	GTATAC	1 cut(s)	953
Bsu36I	CCTNAGG	1 cut(s)	996
BsuRI	GGCC	3 cut(s)	712, 1581, 1805
BtsCI	GGATG	4 cut(s)	373, 561, 1070, 1462
BtsI	GCAGTG	3 cut(s)	264, 1506, 1627
BtsIMutI	CAGTG	6 cut(s)	56, 264, 1040, 1419, 1506, 1627
Cac8I	GCNNGC	4 cut(s)	282, 498, 609, 1321
CaiI	CAGNNNCTG	2 cut(s)	691, 1592
CciI	TCATGA	3 cut(s)	889, 961, 1750
CfoI	GCGC	2 cut(s)	100, 130
Cfr10I	RCCGGY	1 cut(s)	1353
Cfr13I	GGNCC	4 cut(s)	292, 1376, 1579, 1635
CseI	GACGC	2 cut(s)	134, 1208
Csp6I	GTAC	6 cut(s)	688, 731, 1022, 1082, 1357, 1734
CspAI	ACCGGT	1 cut(s)	1353
CviAII	CATG	9 cut(s)	43, 122, 395, 890, 962, 1511, 1561, 1700, 1751
CviQI	GTAC	6 cut(s)	688, 731, 1022, 1082, 1357, 1734
DdeI	CTNAG	6 cut(s)	78, 276, 743, 996, 1005, 1380
DpnI	GATC	4 cut(s)	213, 447, 492, 1755
DpnII	GATC	4 cut(s)	211, 445, 490, 1753
DraI	TTTAAA	1 cut(s)	1350
DriI	GACNNNNNGTC	2 cut(s)	368, 1564
EaeI	YGGCCR	1 cut(s)	710
Eam1104I	CTCTTC	2 cut(s)	841, 1104
Eam1105I	GACNNNNNGTC	2 cut(s)	368, 1564
EarI	CTCTTC	2 cut(s)	841, 1104
Eco130I	CCWWGG	2 cut(s)	737, 1603
Eco147I	AGGCCT	1 cut(s)	1805
Eco47I	GGWCC	3 cut(s)	292, 1376, 1635
Eco57I	CTGAAG	5 cut(s)	804, 1128, 1302, 1701, 1714
Eco81I	CCTNAGG	1 cut(s)	996
EcoNI	CCTNNNNNAGG	1 cut(s)	1666
EcoO109I	RGGNCCY	2 cut(s)	1376, 1635
EcoRI	GAATTC	2 cut(s)	73, 1408
EcoRII	CCWGG	3 cut(s)	658, 789, 938
EcoT14I	CCWWGG	2 cut(s)	737, 1603
EcoT22I	ATGCAT	1 cut(s)	1467
ErhI	CCWWGG	2 cut(s)	737, 1603
FaeI	CATG	9 cut(s)	46, 125, 398, 893, 965, 1514, 1564, 1703, 1754
FalI	AAGNNNNNCTT	2 cut(s)	885, 917
FaqI	GGGAC	1 cut(s)	1532
FatI	CATG	9 cut(s)	42, 121, 394, 889, 961, 1510, 1560, 1699, 1750
FbaI	TGATCA	1 cut(s)	1753
FblI	GTMKAC	3 cut(s)	898, 952, 1557
FokI	GGATG	4 cut(s)	380, 568, 1057, 1469
FspBI	CTAG	8 cut(s)	270, 281, 360, 836, 1089, 1344, 1604, 1668
FspI	TGCGCA	1 cut(s)	99
GlaI	GCGC	2 cut(s)	99, 129
GsaI	CCCAGC	1 cut(s)	1589
HaeIII	GGCC	3 cut(s)	712, 1581, 1805
HapII	CCGG	3 cut(s)	87, 1354, 1718
HgaI	GACGC	2 cut(s)	134, 1208
HhaI	GCGC	2 cut(s)	100, 130
Hin1II	CATG	9 cut(s)	46, 125, 398, 893, 965, 1514, 1564, 1703, 1754
Hin6I	GCGC	2 cut(s)	98, 128
HinP1I	GCGC	2 cut(s)	98, 128
HincII	GTYRAC	1 cut(s)	899
HindII	GTYRAC	1 cut(s)	899
HinfI	GANTC	3 cut(s)	434, 1055, 1721
HpaII	CCGG	3 cut(s)	87, 1354, 1718
HphI	GGTGA	2 cut(s)	1228, 1356
Hpy166II	GTNNAC	7 cut(s)	317, 388, 671, 899, 953, 1359, 1558
Hpy188I	TCNGA	6 cut(s)	72, 106, 439, 858, 1006, 1681
Hpy8I	GTNNAC	7 cut(s)	317, 388, 671, 899, 953, 1359, 1558
Hpy99I	CGWCG	1 cut(s)	981
HpyAV	CCTTC	5 cut(s)	283, 622, 887, 1277, 1795
HpyCH4III	ACNGT	2 cut(s)	522, 1401
HpyCH4IV	ACGT	2 cut(s)	111, 454
HpyF10VI	GCNNNNNNNGC	4 cut(s)	146, 1329, 1595, 1598
HpyF3I	CTNAG	6 cut(s)	78, 276, 743, 996, 1005, 1380
HpySE526I	ACGT	2 cut(s)	111, 454
Hsp92II	CATG	9 cut(s)	46, 125, 398, 893, 965, 1514, 1564, 1703, 1754
HspAI	GCGC	2 cut(s)	98, 128
Ksp22I	TGATCA	1 cut(s)	1753
Kzo9I	GATC	4 cut(s)	211, 445, 490, 1753
LguI	GCTCTTC	1 cut(s)	841
LmnI	GCTCC	4 cut(s)	227, 520, 1043, 1144
LweI	GCATC	6 cut(s)	36, 399, 598, 643, 822, 1447
MaeI	CTAG	8 cut(s)	270, 281, 360, 836, 1089, 1344, 1604, 1668
MaeII	ACGT	2 cut(s)	111, 454
MaeIII	GTNAC	2 cut(s)	751, 1781
MalI	GATC	4 cut(s)	213, 447, 492, 1755
MbiI	CCGCTC	1 cut(s)	874
MboI	GATC	4 cut(s)	211, 445, 490, 1753
MboII	GAAGA	8 cut(s)	174, 260, 418, 810, 858, 940, 965, 1121
MhlI	GDGCHC	2 cut(s)	1040, 1183
MmeI	TCCRAC	1 cut(s)	1778
Mph1103I	ATGCAT	1 cut(s)	1467
MroXI	GAANNNNTTC	2 cut(s)	732, 969
MseI	TTAA	4 cut(s)	309, 1349, 1430, 1472
MslI	CAYNNNNRTG	1 cut(s)	1653
MspA1I	CMGCKG	3 cut(s)	547, 1592, 1598
MspI	CCGG	3 cut(s)	87, 1354, 1718
MspR9I	CCNGG	3 cut(s)	660, 791, 940
MssI	GTTTAAAC	1 cut(s)	1350
Mva1269I	GAATGC	4 cut(s)	24, 58, 514, 1660
MvaI	CCWGG	3 cut(s)	660, 791, 940
MvnI	CGCG	2 cut(s)	128, 1202
MwoI	GCNNNNNNNGC	4 cut(s)	146, 1329, 1595, 1598
NdeII	GATC	4 cut(s)	211, 445, 490, 1753
NheI	GCTAGC	1 cut(s)	280
NlaIII	CATG	9 cut(s)	46, 125, 398, 893, 965, 1514, 1564, 1703, 1754
NlaIV	GGNNCC	5 cut(s)	327, 563, 1377, 1580, 1637
NmeAIII	GCCGAG	2 cut(s)	688, 1520
NsbI	TGCGCA	1 cut(s)	99
NsiI	ATGCAT	1 cut(s)	1467
NspI	RCATGY	2 cut(s)	398, 1564
NspV	TTCGAA	1 cut(s)	726
PagI	TCATGA	3 cut(s)	889, 961, 1750
PceI	AGGCCT	1 cut(s)	1805
PciSI	GCTCTTC	1 cut(s)	841
PctI	GAATGC	4 cut(s)	24, 58, 514, 1660
PdmI	GAANNNNTTC	2 cut(s)	732, 969
PfeI	GAWTC	3 cut(s)	434, 1055, 1721
PflFI	GACNNNGTC	1 cut(s)	1523
PfoI	TCCNGGA	1 cut(s)	789
PinAI	ACCGGT	1 cut(s)	1353
PmeI	GTTTAAAC	1 cut(s)	1350
Ppu21I	YACGTR	1 cut(s)	455
PpuMI	RGGWCCY	2 cut(s)	1376, 1635
Psp5II	RGGWCCY	2 cut(s)	1376, 1635
Psp6I	CCWGG	3 cut(s)	658, 789, 938
PspFI	CCCAGC	1 cut(s)	1585
PspGI	CCWGG	3 cut(s)	658, 789, 938
PspN4I	GGNNCC	5 cut(s)	327, 563, 1377, 1580, 1637
PspPI	GGNCC	4 cut(s)	292, 1376, 1579, 1635
PspPPI	RGGWCCY	2 cut(s)	1376, 1635
PstI	CTGCAG	2 cut(s)	417, 1597
PstNI	CAGNNNCTG	2 cut(s)	691, 1592
PsyI	GACNNNGTC	1 cut(s)	1523
PvuII	CAGCTG	3 cut(s)	547, 1592, 1598
RsaI	GTAC	6 cut(s)	689, 732, 1023, 1083, 1358, 1735
RsaNI	GTAC	6 cut(s)	688, 731, 1022, 1082, 1357, 1734
RseI	CAYNNNNRTG	1 cut(s)	1653
SalI	GTCGAC	1 cut(s)	897
SapI	GCTCTTC	1 cut(s)	841
SaqAI	TTAA	4 cut(s)	309, 1349, 1430, 1472
Sau3AI	GATC	4 cut(s)	211, 445, 490, 1753
Sau96I	GGNCC	4 cut(s)	292, 1376, 1579, 1635
ScaI	AGTACT	1 cut(s)	732
ScrFI	CCNGG	3 cut(s)	660, 791, 940
SduI	GDGCHC	2 cut(s)	1040, 1183
SfaNI	GCATC	6 cut(s)	36, 399, 598, 643, 822, 1447
SfcI	CTRYAG	2 cut(s)	413, 1593
SfuI	TTCGAA	1 cut(s)	726
SinI	GGWCC	3 cut(s)	292, 1376, 1635
SmiMI	CAYNNNNRTG	1 cut(s)	1653
SmlI	CTYRAG	1 cut(s)	1182
SmoI	CTYRAG	1 cut(s)	1182
SpeI	ACTAGT	1 cut(s)	1343
SseBI	AGGCCT	1 cut(s)	1805
SsiI	CCGC	2 cut(s)	874, 1582
SspMI	CTAG	8 cut(s)	270, 281, 360, 836, 1089, 1344, 1604, 1668
StuI	AGGCCT	1 cut(s)	1805
StyD4I	CCNGG	3 cut(s)	658, 789, 938
StyI	CCWWGG	2 cut(s)	737, 1603
TaaI	ACNGT	2 cut(s)	522, 1401
TaiI	ACGT	2 cut(s)	114, 457
TaqI	TCGA	5 cut(s)	703, 726, 898, 979, 1652
TatI	WGTACW	3 cut(s)	730, 1081, 1733
TauI	GCSGC	2 cut(s)	877, 1584
TfiI	GAWTC	3 cut(s)	434, 1055, 1721
Tru1I	TTAA	4 cut(s)	309, 1349, 1430, 1472
Tru9I	TTAA	4 cut(s)	309, 1349, 1430, 1472
TscAI	CASTG	6 cut(s)	63, 271, 1040, 1419, 1506, 1627
TspDTI	ATGAA	7 cut(s)	792, 878, 906, 978, 1059, 1502, 1688
TspGWI	ACGGA	2 cut(s)	325, 1039
TspRI	CASTG	6 cut(s)	63, 271, 1040, 1419, 1506, 1627
Tth111I	GACNNNGTC	1 cut(s)	1523
VpaK11BI	GGWCC	3 cut(s)	292, 1376, 1635
XagI	CCTNNNNNAGG	1 cut(s)	1666
XceI	RCATGY	2 cut(s)	398, 1564
XmaJI	CCTAGG	1 cut(s)	1603
XmiI	GTMKAC	3 cut(s)	898, 952, 1557
XmnI	GAANNNNTTC	2 cut(s)	732, 969
XspI	CTAG	8 cut(s)	270, 281, 360, 836, 1089, 1344, 1604, 1668
ZrmI	AGTACT	1 cut(s)	732
Zsp2I	ATGCAT	1 cut(s)	1467

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.