FvH4_6g01730
MYB Family

Myb/SANT-like DNA-binding domain

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
984138 .. 984581
444 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g01730.t1

Sequence Viewer

Length: 339 bp
ATGATGTTAGTATGCGAGCAAAGTGTATTTATTGAGTGGGTAGAGAAAAGAAACAAAGATGTTGCTGGATTATATGGTAAGCCATTTTGGCATTACTATAATCTTGGAGAGATATATGGAAGAGATCATGCAAATGGACAAAATTTGGGAAATGCTGATGATGATGATGAAGAGGAAATTAGACGTGAGAATACCAACGCTGATCCATTCAATTTAGAGGATGAGACTCTATTTGACAATGTGAACCAAAGTGTAGATATGGAACCACAACATGAAGGGTTTGAAGATGTTGATGTATCCTTTACGCAACCTAGTCCTCAAACCCCTAGTGTCTCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

113

Amino Acids

12.92

Weight (kDa)

4.09

Isoelectric Point (pI)

57.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 197
AcsI RAATTY 1 cut(s) 142
AgsI TTSAA 2 cut(s) 211, 284
AjiI CACGTC 1 cut(s) 185
Alw26I GTCTC 1 cut(s) 218
AlwI GGATC 1 cut(s) 197
ApoI RAATTY 1 cut(s) 142
BciVI GTATCC 1 cut(s) 307
BcoDI GTCTC 1 cut(s) 218
BfaI CTAG 2 cut(s) 312, 327
BfuI GTATCC 1 cut(s) 307
BglI GCCNNNNNGGC 1 cut(s) 88
BmgBI CACGTC 1 cut(s) 185
BmiI GGNNCC 1 cut(s) 264
BseGI GGATG 1 cut(s) 226
BsmAI GTCTC 1 cut(s) 218
Bsp143I GATC 2 cut(s) 124, 202
BspLI GGNNCC 1 cut(s) 264
BspPI GGATC 1 cut(s) 197
BssMI GATC 2 cut(s) 124, 202
Bst6I CTCTTC 2 cut(s) 115, 165
BstC8I GCNNGC 1 cut(s) 17
BstF5I GGATG 1 cut(s) 226
BstKTI GATC 2 cut(s) 127, 205
BstMAI GTCTC 1 cut(s) 218
BstMBI GATC 2 cut(s) 124, 202
BstMWI GCNNNNNNNGC 1 cut(s) 88
BsuI GTATCC 1 cut(s) 307
BtrI CACGTC 1 cut(s) 185
BtsCI GGATG 1 cut(s) 226
Cac8I GCNNGC 1 cut(s) 17
CviAII CATG 2 cut(s) 128, 272
CviJI RGCY 1 cut(s) 82
CviKI_1 RGCY 1 cut(s) 82
DpnI GATC 2 cut(s) 126, 204
DpnII GATC 2 cut(s) 124, 202
Eam1104I CTCTTC 2 cut(s) 115, 165
EarI CTCTTC 2 cut(s) 115, 165
FaeI CATG 2 cut(s) 131, 275
FaiI YATR 9 cut(s) 13, 73, 75, 99, 115, 117, 129, 260, 273
FatI CATG 2 cut(s) 127, 271
FokI GGATG 1 cut(s) 233
FspBI CTAG 2 cut(s) 312, 327
Hin1II CATG 2 cut(s) 131, 275
HinfI GANTC 1 cut(s) 226
Hpy166II GTNNAC 1 cut(s) 244
Hpy8I GTNNAC 1 cut(s) 244
HpyAV CCTTC 1 cut(s) 269
HpyCH4IV ACGT 1 cut(s) 184
HpyCH4V TGCA 1 cut(s) 131
HpyF10VI GCNNNNNNNGC 1 cut(s) 88
HpySE526I ACGT 1 cut(s) 184
Hsp92II CATG 2 cut(s) 131, 275
Kzo9I GATC 2 cut(s) 124, 202
LpnPI CCDG 1 cut(s) 51
MaeI CTAG 2 cut(s) 312, 327
MaeII ACGT 1 cut(s) 184
MalI GATC 2 cut(s) 126, 204
MboI GATC 2 cut(s) 124, 202
MboII GAAGA 3 cut(s) 132, 182, 296
MluCI AATT 3 cut(s) 142, 177, 211
MlyI GAGTC 1 cut(s) 220
MnlI CCTC 3 cut(s) 166, 211, 327
MslI CAYNNNNRTG 1 cut(s) 132
MwoI GCNNNNNNNGC 1 cut(s) 88
NdeII GATC 2 cut(s) 124, 202
NlaIII CATG 2 cut(s) 131, 275
NlaIV GGNNCC 1 cut(s) 264
PleI GAGTC 1 cut(s) 220
PpsI GAGTC 1 cut(s) 220
PspN4I GGNNCC 1 cut(s) 264
RseI CAYNNNNRTG 1 cut(s) 132
Sau3AI GATC 2 cut(s) 124, 202
SchI GAGTC 1 cut(s) 220
SetI ASST 2 cut(s) 187, 313
SgeI CNNG 7 cut(s) 28, 78, 116, 140, 197, 284, 324
SmiMI CAYNNNNRTG 1 cut(s) 132
Sse9I AATT 3 cut(s) 142, 177, 211
SspMI CTAG 2 cut(s) 312, 327
TaiI ACGT 1 cut(s) 187
TasI AATT 3 cut(s) 142, 177, 211
TspDTI ATGAA 2 cut(s) 183, 288
XapI RAATTY 1 cut(s) 142
XspI CTAG 2 cut(s) 312, 327
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.