DDE superfamily endonuclease
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 624 |
| AclWI | GGATC | 1 cut(s) | 546 |
| AcsI | RAATTY | 2 cut(s) | 199, 587 |
| AcuI | CTGAAG | 1 cut(s) | 596 |
| AgsI | TTSAA | 7 cut(s) | 21, 163, 211, 230, 250, 325, 468 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 393, 425 |
| AluBI | AGCT | 3 cut(s) | 272, 461, 557 |
| AluI | AGCT | 3 cut(s) | 272, 461, 557 |
| AlwI | GGATC | 1 cut(s) | 546 |
| Ama87I | CYCGRG | 1 cut(s) | 139 |
| ApoI | RAATTY | 2 cut(s) | 199, 587 |
| AsuHPI | GGTGA | 6 cut(s) | 146, 210, 250, 506, 581, 610 |
| AvaI | CYCGRG | 1 cut(s) | 139 |
| BbsI | GAAGAC | 2 cut(s) | 248, 453 |
| BccI | CCATC | 3 cut(s) | 85, 97, 120 |
| BceAI | ACGGC | 1 cut(s) | 27 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 593, 627 |
| BciVI | GTATCC | 1 cut(s) | 149 |
| BfaI | CTAG | 1 cut(s) | 182 |
| BfuI | GTATCC | 1 cut(s) | 149 |
| BmeT110I | CYCGRG | 1 cut(s) | 139 |
| BmsI | GCATC | 2 cut(s) | 224, 325 |
| BpiI | GAAGAC | 2 cut(s) | 248, 453 |
| Bpu10I | CCTNAGC | 1 cut(s) | 650 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 305, 335 |
| BseGI | GGATG | 2 cut(s) | 340, 523 |
| BseRI | GAGGAG | 2 cut(s) | 326, 524 |
| BsiHKCI | CYCGRG | 1 cut(s) | 139 |
| BslFI | GGGAC | 1 cut(s) | 60 |
| BsmFI | GGGAC | 1 cut(s) | 60 |
| BsmI | GAATGC | 1 cut(s) | 101 |
| BsoBI | CYCGRG | 1 cut(s) | 139 |
| Bsp143I | GATC | 1 cut(s) | 538 |
| BspPI | GGATC | 1 cut(s) | 546 |
| BssMI | GATC | 1 cut(s) | 538 |
| Bst4CI | ACNGT | 1 cut(s) | 723 |
| Bst6I | CTCTTC | 1 cut(s) | 303 |
| BstC8I | GCNNGC | 1 cut(s) | 555 |
| BstDEI | CTNAG | 2 cut(s) | 72, 650 |
| BstF5I | GGATG | 2 cut(s) | 340, 523 |
| BstKTI | GATC | 1 cut(s) | 541 |
| BstMBI | GATC | 1 cut(s) | 538 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 428, 723 |
| BstV2I | GAAGAC | 2 cut(s) | 248, 453 |
| BstX2I | RGATCY | 1 cut(s) | 538 |
| BstYI | RGATCY | 1 cut(s) | 538 |
| BsuI | GTATCC | 1 cut(s) | 149 |
| BtsCI | GGATG | 2 cut(s) | 340, 523 |
| BtsIMutI | CAGTG | 1 cut(s) | 728 |
| Cac8I | GCNNGC | 1 cut(s) | 555 |
| CviAII | CATG | 2 cut(s) | 667, 713 |
| CviJI | RGCY | 7 cut(s) | 14, 144, 272, 461, 557, 632, 717 |
| CviKI_1 | RGCY | 7 cut(s) | 14, 144, 272, 461, 557, 632, 717 |
| DdeI | CTNAG | 2 cut(s) | 72, 650 |
| DpnI | GATC | 1 cut(s) | 540 |
| DpnII | GATC | 1 cut(s) | 538 |
| DraI | TTTAAA | 1 cut(s) | 148 |
| Eam1104I | CTCTTC | 1 cut(s) | 303 |
| EarI | CTCTTC | 1 cut(s) | 303 |
| Eco57I | CTGAAG | 1 cut(s) | 596 |
| Eco88I | CYCGRG | 1 cut(s) | 139 |
| EcoRI | GAATTC | 2 cut(s) | 199, 587 |
| EcoT22I | ATGCAT | 1 cut(s) | 697 |
| FaeI | CATG | 2 cut(s) | 670, 716 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 177, 209, 546, 578 |
| FaqI | GGGAC | 1 cut(s) | 60 |
| FatI | CATG | 2 cut(s) | 666, 712 |
| FokI | GGATG | 2 cut(s) | 347, 510 |
| FspBI | CTAG | 1 cut(s) | 182 |
| Hin1II | CATG | 2 cut(s) | 670, 716 |
| HinfI | GANTC | 3 cut(s) | 137, 230, 464 |
| HphI | GGTGA | 6 cut(s) | 146, 210, 250, 506, 581, 610 |
| Hpy166II | GTNNAC | 1 cut(s) | 572 |
| Hpy188I | TCNGA | 2 cut(s) | 198, 480 |
| Hpy8I | GTNNAC | 1 cut(s) | 572 |
| HpyAV | CCTTC | 4 cut(s) | 36, 205, 244, 529 |
| HpyCH4III | ACNGT | 1 cut(s) | 723 |
| HpyCH4IV | ACGT | 3 cut(s) | 403, 450, 624 |
| HpyCH4V | TGCA | 6 cut(s) | 278, 338, 377, 553, 604, 695 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 428, 723 |
| HpyF3I | CTNAG | 2 cut(s) | 72, 650 |
| HpySE526I | ACGT | 3 cut(s) | 403, 450, 624 |
| Hsp92II | CATG | 2 cut(s) | 670, 716 |
| Kzo9I | GATC | 1 cut(s) | 538 |
| LmnI | GCTCC | 1 cut(s) | 709 |
| LpnPI | CCDG | 2 cut(s) | 189, 408 |
| LweI | GCATC | 2 cut(s) | 224, 325 |
| MaeI | CTAG | 1 cut(s) | 182 |
| MaeII | ACGT | 3 cut(s) | 403, 450, 624 |
| MaeIII | GTNAC | 1 cut(s) | 134 |
| MalI | GATC | 1 cut(s) | 540 |
| MboI | GATC | 1 cut(s) | 538 |
| MboII | GAAGA | 6 cut(s) | 253, 320, 455, 458, 589, 689 |
| MfeI | CAATTG | 1 cut(s) | 124 |
| MflI | RGATCY | 1 cut(s) | 538 |
| MluCI | AATT | 4 cut(s) | 124, 167, 199, 587 |
| MlyI | GAGTC | 1 cut(s) | 131 |
| MmeI | TCCRAC | 1 cut(s) | 44 |
| MnlI | CCTC | 5 cut(s) | 32, 70, 125, 304, 502 |
| Mph1103I | ATGCAT | 1 cut(s) | 697 |
| MseI | TTAA | 2 cut(s) | 147, 699 |
| MslI | CAYNNNNRTG | 3 cut(s) | 89, 372, 528 |
| MunI | CAATTG | 1 cut(s) | 124 |
| Mva1269I | GAATGC | 1 cut(s) | 101 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 428, 723 |
| NdeII | GATC | 1 cut(s) | 538 |
| NlaIII | CATG | 2 cut(s) | 670, 716 |
| NmuCI | GTSAC | 1 cut(s) | 134 |
| NsiI | ATGCAT | 1 cut(s) | 697 |
| PctI | GAATGC | 1 cut(s) | 101 |
| PfeI | GAWTC | 2 cut(s) | 230, 464 |
| PleI | GAGTC | 1 cut(s) | 131 |
| PpsI | GAGTC | 1 cut(s) | 131 |
| Psp1406I | AACGTT | 1 cut(s) | 624 |
| PsuI | RGATCY | 1 cut(s) | 538 |
| RseI | CAYNNNNRTG | 3 cut(s) | 89, 372, 528 |
| SaqAI | TTAA | 2 cut(s) | 147, 699 |
| Sau3AI | GATC | 1 cut(s) | 538 |
| SchI | GAGTC | 1 cut(s) | 131 |
| SetI | ASST | 7 cut(s) | 136, 274, 406, 453, 463, 559, 627 |
| SfaNI | GCATC | 2 cut(s) | 224, 325 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 89, 372, 528 |
| Sse9I | AATT | 4 cut(s) | 124, 167, 199, 587 |
| SspMI | CTAG | 1 cut(s) | 182 |
| TaaI | ACNGT | 1 cut(s) | 723 |
| TaiI | ACGT | 3 cut(s) | 406, 453, 627 |
| TasI | AATT | 4 cut(s) | 124, 167, 199, 587 |
| TfiI | GAWTC | 2 cut(s) | 230, 464 |
| Tru1I | TTAA | 2 cut(s) | 147, 699 |
| Tru9I | TTAA | 2 cut(s) | 147, 699 |
| TscAI | CASTG | 1 cut(s) | 728 |
| TseFI | GTSAC | 1 cut(s) | 134 |
| Tsp45I | GTSAC | 1 cut(s) | 134 |
| TspDTI | ATGAA | 4 cut(s) | 321, 456, 464, 690 |
| TspGWI | ACGGA | 1 cut(s) | 408 |
| TspRI | CASTG | 1 cut(s) | 728 |
| XapI | RAATTY | 2 cut(s) | 199, 587 |
| XspI | CTAG | 1 cut(s) | 182 |
| Zsp2I | ATGCAT | 1 cut(s) | 697 |