DDE superfamily endonuclease
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 250, 265 |
| AfaI | GTAC | 1 cut(s) | 195 |
| AgsI | TTSAA | 2 cut(s) | 71, 215 |
| AhlI | ACTAGT | 1 cut(s) | 230 |
| Alw26I | GTCTC | 1 cut(s) | 275 |
| AlwI | GGATC | 2 cut(s) | 250, 265 |
| BccI | CCATC | 1 cut(s) | 230 |
| BcoDI | GTCTC | 1 cut(s) | 275 |
| BcuI | ACTAGT | 1 cut(s) | 230 |
| BfaI | CTAG | 1 cut(s) | 231 |
| BmsI | GCATC | 2 cut(s) | 31, 160 |
| BsaJI | CCNNGG | 1 cut(s) | 85 |
| Bse3DI | GCAATG | 1 cut(s) | 120 |
| BseDI | CCNNGG | 1 cut(s) | 85 |
| BseGI | GGATG | 2 cut(s) | 46, 175 |
| BseMI | GCAATG | 1 cut(s) | 120 |
| BseMII | CTCAG | 1 cut(s) | 260 |
| BsmAI | GTCTC | 1 cut(s) | 275 |
| BsmBI | CGTCTC | 1 cut(s) | 275 |
| Bsp1407I | TGTACA | 1 cut(s) | 193 |
| Bsp143I | GATC | 3 cut(s) | 106, 242, 257 |
| BspCNI | CTCAG | 1 cut(s) | 259 |
| BspPI | GGATC | 2 cut(s) | 250, 265 |
| BsrDI | GCAATG | 1 cut(s) | 120 |
| BsrGI | TGTACA | 1 cut(s) | 193 |
| BssECI | CCNNGG | 1 cut(s) | 85 |
| BssMI | GATC | 3 cut(s) | 106, 242, 257 |
| BssT1I | CCWWGG | 1 cut(s) | 85 |
| Bst4CI | ACNGT | 1 cut(s) | 50 |
| BstAUI | TGTACA | 1 cut(s) | 193 |
| BstDEI | CTNAG | 1 cut(s) | 246 |
| BstF5I | GGATG | 2 cut(s) | 46, 175 |
| BstKTI | GATC | 3 cut(s) | 109, 245, 260 |
| BstMAI | GTCTC | 1 cut(s) | 275 |
| BstMBI | GATC | 3 cut(s) | 106, 242, 257 |
| BstX2I | RGATCY | 1 cut(s) | 242 |
| BstYI | RGATCY | 1 cut(s) | 242 |
| BtsCI | GGATG | 2 cut(s) | 46, 175 |
| Csp6I | GTAC | 1 cut(s) | 194 |
| CviAII | CATG | 1 cut(s) | 226 |
| CviJI | RGCY | 1 cut(s) | 274 |
| CviKI_1 | RGCY | 1 cut(s) | 274 |
| CviQI | GTAC | 1 cut(s) | 194 |
| DdeI | CTNAG | 1 cut(s) | 246 |
| DpnI | GATC | 3 cut(s) | 108, 244, 259 |
| DpnII | GATC | 3 cut(s) | 106, 242, 257 |
| Eco130I | CCWWGG | 1 cut(s) | 85 |
| EcoT14I | CCWWGG | 1 cut(s) | 85 |
| ErhI | CCWWGG | 1 cut(s) | 85 |
| Esp3I | CGTCTC | 1 cut(s) | 275 |
| FaeI | CATG | 1 cut(s) | 229 |
| FaiI | YATR | 9 cut(s) | 57, 81, 97, 99, 179, 227, 252, 308, 310 |
| FatI | CATG | 1 cut(s) | 225 |
| FokI | GGATG | 2 cut(s) | 53, 182 |
| FspBI | CTAG | 1 cut(s) | 231 |
| Hin1II | CATG | 1 cut(s) | 229 |
| Hpy166II | GTNNAC | 2 cut(s) | 62, 194 |
| Hpy188III | TCNNGA | 1 cut(s) | 185 |
| Hpy8I | GTNNAC | 2 cut(s) | 62, 194 |
| HpyCH4III | ACNGT | 1 cut(s) | 50 |
| HpyCH4IV | ACGT | 1 cut(s) | 207 |
| HpyCH4V | TGCA | 3 cut(s) | 44, 113, 173 |
| HpyF3I | CTNAG | 1 cut(s) | 246 |
| HpySE526I | ACGT | 1 cut(s) | 207 |
| Hsp92II | CATG | 1 cut(s) | 229 |
| Kzo9I | GATC | 3 cut(s) | 106, 242, 257 |
| LweI | GCATC | 2 cut(s) | 31, 160 |
| MaeI | CTAG | 1 cut(s) | 231 |
| MaeII | ACGT | 1 cut(s) | 207 |
| MalI | GATC | 3 cut(s) | 108, 244, 259 |
| MboI | GATC | 3 cut(s) | 106, 242, 257 |
| MboII | GAAGA | 4 cut(s) | 161, 164, 299, 305 |
| MflI | RGATCY | 1 cut(s) | 242 |
| MluCI | AATT | 1 cut(s) | 263 |
| MmeI | TCCRAC | 1 cut(s) | 109 |
| MnlI | CCTC | 2 cut(s) | 181, 262 |
| MseI | TTAA | 1 cut(s) | 30 |
| MslI | CAYNNNNRTG | 1 cut(s) | 78 |
| NdeII | GATC | 3 cut(s) | 106, 242, 257 |
| NlaIII | CATG | 1 cut(s) | 229 |
| PsuI | RGATCY | 1 cut(s) | 242 |
| RsaI | GTAC | 1 cut(s) | 195 |
| RsaNI | GTAC | 1 cut(s) | 194 |
| RseI | CAYNNNNRTG | 1 cut(s) | 78 |
| SaqAI | TTAA | 1 cut(s) | 30 |
| Sau3AI | GATC | 3 cut(s) | 106, 242, 257 |
| SetI | ASST | 1 cut(s) | 210 |
| SfaNI | GCATC | 2 cut(s) | 31, 160 |
| SgeI | CNNG | 8 cut(s) | 98, 122, 186, 197, 209, 238, 243, 287 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 78 |
| SpeI | ACTAGT | 1 cut(s) | 230 |
| Sse9I | AATT | 1 cut(s) | 263 |
| SspMI | CTAG | 1 cut(s) | 231 |
| StyI | CCWWGG | 1 cut(s) | 85 |
| TaaI | ACNGT | 1 cut(s) | 50 |
| TaiI | ACGT | 1 cut(s) | 210 |
| TasI | AATT | 1 cut(s) | 263 |
| TatI | WGTACW | 1 cut(s) | 193 |
| Tru1I | TTAA | 1 cut(s) | 30 |
| Tru9I | TTAA | 1 cut(s) | 30 |
| TspDTI | ATGAA | 2 cut(s) | 236, 306 |
| TspGWI | ACGGA | 1 cut(s) | 299 |
| XspI | CTAG | 1 cut(s) | 231 |