Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0000934

Physical Location & Seq

Genomic Coordinates Reverse (-)

29060800 .. 29064035

Gene Structure 3236 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g39340.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2538 bp

ATGGTACTTTCTAGTTTATTGATAGGAATCATCAAACGTATCGAGCATAATGTCTATGATTTGGCTCCCAGGGAGAGAGAGTTAATGAACCTTGTTCACAGTCATTGCAGTTCGTCACTAATCCTCGTCTTCCTTATGATTGCAACAATGGCTGTCTTCATCTTCAGTTACTCTTTCATAATGCTAACTGTTGCGAAACGGGAAATGCATCGTTACGCCACACTCATAGAACAAAGGGAGAAAACTGAGCAGGCTGAGAGAAAGAGCATGAGGAAAAGCGACGCATTTGCTAAAGCAAGCCATGACATTCGCGCCGCGCTTGCTGGAATTATTAGTTGGATCAACTTCTGTAAAGAAGATATTCATGATGCTCTTGATCTTCATGCCACAGATGGTAGAAGCACCCGTCATTCTGAAATAGAGACGGTCTTGACAAAAATAGATTCTAACTTAAAAAGACTGGATGTTCATGCAGAAGATCTTTTAGGTATATTGAACTCAGTTCTTGATAAAAGCAAAATTGAAGCAGGTAAGATGGTACTTGAAAATGAAGAATTTGATATGGCTCAACTCCTTGAAGAGGTAGTGGATTTGTTTCTTCCAACAGCATCAATGAAGGGATTAGATGTGGTATTGGATCCTTGTGATGGATCTGTTACGAAGTTTGCGCGTGTGAGAGGTGACAGGGGAAGGCTTAAGCAGATACTAAACAACTTGCTAAGCAATGCTGTTAAGTTTACTTCAGAAGGGCAAATCACAGTTCGCGCTTGGGTTCGAAAACCAAGTTTCAAGAAGTCAAGAAGTGCTTCTCATGAGCAGACTAGTAGCTTCTCAAAACAGCTCTTGTGCTTCTTTAATTATAAGAGCAGGAACAAAGATGACAAGGAAGCAATGGATGGTTCTGAAAGGGATCCAAATTCTTTGGAATTTGTTTTTGAGGTGGATGATACTGGTAGAGGAATTCTCAAGGAGAGGCAAAAATCTGTGTTCGAGGACTATGTCCAAGTCAAAGAAAAAGCACTTGGAGAAGGTGGTACAGGCTTAGGACTTGGAATTGTTCAATCTCTGGTTCGTTTGATGCATGGAGAAATAGGAATTGTGGACAAGGAGATTGGAGAAAACGGGACATGCTTCAGGTTTAATGTACTGCTAAGTACTATTAAGGATCCTACTATTAATGCCTGTGAGGATTCCATAAAAGCAGAAGCAGACATTGAAATGGGAGTTAGTGATAATCAAACACCAATTGCAAGCCCCAAGGTGAACACTCGTGCTACCACCGCAAGTCCTAAGCTGGAGGGATCCCATGTTGTACTGCTGATTAACAATGCAGAGCGGAGGAGAGTTACACAGAAGTTCATGGAGAAACTTGGGATAAAAGTATCGGTAGCAGAACGATGGGAGCAACTTGCTCGTACTCTCCAGAAGATAAAAAACAGGAAGGGACATTCTCCACACAATTCCATATCAGGAATATCTGACTTGGGTCTGCAGGATTGCTTGATCAAATCTGCCTCATGCAACGCCAATTTCAGCTTCAATAGAGCAAAGGAAGTGTCTCTGATGAGTTCCATGGATGGATCAACAGACAACAACATACTGCCTCTCTTTCATAAGAAGAGTAGCAGTAGTAATCTTCGTGGAGCATCTGATCGCTTCGTGATGCTACTTATTGATACTACAGCTGGACCACTCCCGGAACTATACAAGATTGTGAATGATTTCAAAAGAGGCCTCCAAAATGGTTCGTACTGCAAGGTTGTTTGGTTATCAAGTCCATTTTCTCACAGCAATTTAAGCATCAACAGGGATATGTTGGATAGCGACGATGTTATCAAACACAAGCCTCTGCACGGTACATGTCTCTATGAAGTTGTAAGGCTTCTACCAGAGTGTGGGGGTGCATTGCCAAAAAGATCATCAGGTCAGGTTGCATCAAAACTAGTTTCAACAGCTCCTAGTTCATCAAGAAATCCGTACATTCATACAGATGATGACAACTCCTCTGACCAAATAGTACAAGAGAGTAATTCACCAACTCCTCAACGCTATCAGTCTCCTAATAATGTTGGCTCAATATCAGCAAGTGTATCAGCCCCAACAGACCGTGACATCAAACCTTTGACAGGGAAGAAAATTTTGGTTGCAGAGGACAAAGCACAGTTACGAATGGTGGCTATGCGGGCTTTGTCACAATTGGGTGCAACTGTGAAGCTTTGTGAAAATGGAAGAGAAGCTTTGGATGTAATTCGCAATGATCTACTCAATCAAAGGAAACATGTTTATGACTATATACTCATGGACTGCCAGATGCCAGAAATGGATGGTTGCGAAGCGACCAGGGAAATAAGGAAAGAGGAGAAACTGTACAATGTTCGCATTCCAATCATTGCATTAACAGCTCATGAAAAAGGAGGAGAGGAAACAAGAAGGATGATGGAGGCTGGTATGGACGAACATTTAGAGAAAACCGCCATAACGACTAGTCTAGTGGAAACACTTGCAAGGATTGATCATAGTACTAAAGCAAATAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009553 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009888 GO:0009987 GO:0010033 GO:0010087 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0018106 GO:0018193 GO:0018202 GO:0019538 GO:0023052 GO:0030054 GO:0032501 GO:0032502 GO:0032870 GO:0036211 GO:0040007 GO:0042221 GO:0042802 GO:0042803 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046983 GO:0048229 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0071704 GO:0071944 GO:0080117 GO:0080190 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HATPase_c HisKA Response_reg

Protein Analysis

846

Amino Acids

94.26

Weight (kDa)

7.59

Isoelectric Point (pI)

38.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c	PF02518	309 - 382	1.1e-11	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response_reg	PF00072	713 - 833	2.6e-19	Response regulator receiver domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000934)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02090
fragaria_vesca	FvH4_2g00520 FvH4_5g39340 FvH4_5g39350
malus_domestica	MD03G1295900.v1.1 MD03G1296400.v1.1 MD11G1315000.v1.1 MD11G1315800.v1.1
prunus_persica	Prupe.8G031600_v2.0.a1 Prupe.8G270900_v2.0.a1 Prupe.8G271500_v2.0.a1
pyrus_communis	pycom03g23400 pycom03g23460 pycom11g27520 pycom11g27570
rosa_chinensis	RchiOBHm_Chr6g0250521 RchiOBHm_Chr6g0250591 RchiOBHm_Chr6g0250601 RchiOBHm_Chr6g0250841 RchiOBHm_Chr7g0241621 RchiOBHm_Chr7g0241631
rosa_laevigata	RLG00000000559 RLG00000000560 RLG00000015494 RLG00000015498 RLG00000015520 RLG00000015530 RLG00000015533 RLG00000015535
rosa_multiflora	Rmu_co8325851.1_g000001 Rmu_co8374241.1_g000001 Rmu_co8391029.1_g000001 Rmu_sc0002268.1_g000012 Rmu_sc0002268.1_g000013 Rmu_sc0007248.1_g000005 Rmu_sc0033402.1_g000001
rosa_roxburghii	Rroxscaffold_3G00218870 Rroxscaffold_7G00217140 Rroxscaffold_7G00217190
rosa_rugosa	Rorug07G0345700 Rorug07G0345800
rosa_samantha	Rh6AG006300 Rh6AG007200 Rh6AG007300 Rh6BG003700 Rh6BG004300 Rh6CG004500 Rh6DG004500 Rh6DG005300 Rh7AG500200 Rh7AG500300 Rh7BG471300 Rh7BG471400 Rh7CG516700 Rh7CG516800 Rh7DG485200 Rh7DG485300
rosa_wichuraiana	Rw0G020910 Rw6G000690 Rw6G000760 Rw6G000800 Rw6G000850 Rw7G042250 Rw7G042260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	861
Acc36I	ACCTGC	1 cut(s)	518
AccB7I	CCANNNNNTGG	1 cut(s)	1895
AccBSI	CCGCTC	1 cut(s)	1336
AccII	CGCG	4 cut(s)	312, 317, 670, 765
AciI	CCGC	5 cut(s)	315, 1281, 1336, 2182, 2472
AcsI	RAATTY	5 cut(s)	554, 916, 926, 960, 2136
AcuI	CTGAAG	3 cut(s)	148, 726, 1117
AfiI	CCNNNNNNNGG	5 cut(s)	580, 647, 1853, 1895, 2126
AflII	CTTAAG	1 cut(s)	695
AflIII	ACRYGT	2 cut(s)	1859, 2278
AhlI	ACTAGT	3 cut(s)	821, 1942, 2483
AjnI	CCWGG	2 cut(s)	68, 2339
AjuI	GAANNNNNNNTTGG	8 cut(s)	319, 351, 1005, 1037, 1520, 1552, 2123, 2155
AluBI	AGCT	9 cut(s)	828, 841, 1294, 1536, 1685, 1955, 2215, 2237, 2402
AluI	AGCT	9 cut(s)	828, 841, 1294, 1536, 1685, 1955, 2215, 2237, 2402
Alw26I	GTCTC	4 cut(s)	416, 1563, 1868, 2061
AoxI	GGCC	1 cut(s)	1732
ApoI	RAATTY	5 cut(s)	554, 916, 926, 960, 2136
ArsI	GACNNNNNNTTYG	2 cut(s)	1541, 1573
AseI	ATTAAT	1 cut(s)	1176
Asp700I	GAANNNNTTC	3 cut(s)	360, 805, 1721
AspLEI	GCGC	4 cut(s)	314, 319, 670, 767
AspS9I	GGNCC	1 cut(s)	1688
AsuC2I	CCSGG	1 cut(s)	1697
AsuHPI	GGTGA	3 cut(s)	692, 1273, 2025
AsuII	TTCGAA	1 cut(s)	775
AvaII	GGWCC	1 cut(s)	1688
BamHI	GGATCC	4 cut(s)	637, 910, 1165, 1301
BauI	CACGAG	1 cut(s)	1269
BbsI	GAAGAC	2 cut(s)	121, 148
BccI	CCATC	8 cut(s)	386, 529, 641, 890, 1392, 1571, 2318, 2431
BcgI	CGANNNNNNTGC	4 cut(s)	269, 303, 1394, 1428
BciT130I	CCWGG	2 cut(s)	70, 2341
BclI	TGATCA	2 cut(s)	1503, 2512
BcnI	CCSGG	1 cut(s)	1697
BcoDI	GTCTC	4 cut(s)	416, 1563, 1868, 2061
BcuI	ACTAGT	3 cut(s)	821, 1942, 2483
BfaI	CTAG	6 cut(s)	12, 822, 1943, 1959, 2484, 2489
BfmI	CTRYAG	2 cut(s)	1490, 1680
BfrI	CTTAAG	1 cut(s)	695
BfuAI	ACCTGC	1 cut(s)	518
BglII	AGATCT	1 cut(s)	478
BisI	GCNGC	1 cut(s)	315
BlpI	GCTNAGC	1 cut(s)	719
BlsI	GCNGC	1 cut(s)	316
BmcAI	AGTACT	2 cut(s)	1156, 2521
Bme1390I	CCNGG	3 cut(s)	70, 1697, 2341
Bme18I	GGWCC	1 cut(s)	1688
BmgT120I	GGNCC	1 cut(s)	1688
BmiI	GGNNCC	5 cut(s)	66, 639, 912, 1167, 1303
BmrFI	CCNGG	3 cut(s)	70, 1697, 2341
BmsI	GCATC	9 cut(s)	217, 358, 617, 1068, 1653, 1655, 1809, 1943, 2301
BoxI	GACNNNNGTC	1 cut(s)	1485
BpiI	GAAGAC	2 cut(s)	121, 148
BplI	GAGNNNNNCTC	2 cut(s)	948, 980
BpmI	CTGGAG	2 cut(s)	1316, 1406
Bpu10I	CCTNAGC	2 cut(s)	1042, 1290
Bpu1102I	GCTNAGC	1 cut(s)	719
Bpu14I	TTCGAA	1 cut(s)	775
BpuEI	CTTGAG	1 cut(s)	950
BpuMI	CCSGG	1 cut(s)	1697
BsaBI	GATNNNNATC	1 cut(s)	26
BsaJI	CCNNGG	5 cut(s)	68, 69, 1257, 1572, 2340
BsaXI	ACNNNNNCTCC	4 cut(s)	65, 95, 2351, 2381
Bsc4I	CCNNNNNNNGG	5 cut(s)	580, 647, 1853, 1895, 2126
Bse1I	ACTGG	2 cut(s)	465, 955
Bse3DI	GCAATG	6 cut(s)	103, 730, 897, 1904, 2260, 2388
Bse8I	GATNNNNATC	1 cut(s)	26
BseBI	CCWGG	2 cut(s)	70, 2341
BseDI	CCNNGG	5 cut(s)	68, 69, 1257, 1572, 2340
BseGI	GGATG	7 cut(s)	469, 901, 949, 1582, 2248, 2329, 2439
BseJI	GATNNNNATC	1 cut(s)	26
BseLI	CCNNNNNNNGG	5 cut(s)	580, 647, 1853, 1895, 2126
BseMI	GCAATG	6 cut(s)	103, 730, 897, 1904, 2260, 2388
BseMII	CTCAG	3 cut(s)	237, 246, 513
BseNI	ACTGG	2 cut(s)	465, 955
BseRI	GAGGAG	5 cut(s)	1354, 1993, 2031, 2372, 2430
BsgI	GTGCAG	1 cut(s)	1835
Bsh1236I	CGCG	4 cut(s)	312, 317, 670, 765
BshFI	GGCC	1 cut(s)	1734
BsiSI	CCGG	1 cut(s)	1697
BslFI	GGGAC	2 cut(s)	1138, 1458
BslI	CCNNNNNNNGG	5 cut(s)	580, 647, 1853, 1895, 2126
BsmAI	GTCTC	4 cut(s)	416, 1563, 1868, 2061
BsmBI	CGTCTC	1 cut(s)	416
BsmFI	GGGAC	2 cut(s)	1138, 1458
BsmI	GAATGC	1 cut(s)	2379
BsnI	GGCC	1 cut(s)	1734
Bsp119I	TTCGAA	1 cut(s)	775
Bsp1407I	TGTACA	1 cut(s)	2367
Bsp1720I	GCTNAGC	1 cut(s)	719
Bsp19I	CCATGG	1 cut(s)	1572
BspACI	CCGC	5 cut(s)	315, 1281, 1336, 2182, 2472
BspANI	GGCC	1 cut(s)	1734
BspCNI	CTCAG	3 cut(s)	238, 247, 512
BspFNI	CGCG	4 cut(s)	312, 317, 670, 765
BspHI	TCATGA	3 cut(s)	364, 811, 2404
BspLI	GGNNCC	5 cut(s)	66, 639, 912, 1167, 1303
BspMAI	CTGCAG	1 cut(s)	1494
BspMI	ACCTGC	1 cut(s)	518
BspT104I	TTCGAA	1 cut(s)	775
BspTI	CTTAAG	1 cut(s)	695
BsrBI	CCGCTC	1 cut(s)	1336
BsrDI	GCAATG	6 cut(s)	103, 730, 897, 1904, 2260, 2388
BsrGI	TGTACA	1 cut(s)	2367
BsrI	ACTGG	2 cut(s)	465, 955
BssECI	CCNNGG	5 cut(s)	68, 69, 1257, 1572, 2340
BssSI	CACGAG	1 cut(s)	1269
BssT1I	CCWWGG	2 cut(s)	1257, 1572
Bst2BI	CACGAG	1 cut(s)	1269
Bst2UI	CCWGG	2 cut(s)	70, 2341
Bst4CI	ACNGT	9 cut(s)	101, 190, 427, 760, 1856, 2108, 2163, 2209, 2367
Bst6I	CTCTTC	3 cut(s)	573, 1613, 2224
BstAFI	CTTAAG	1 cut(s)	695
BstAUI	TGTACA	1 cut(s)	2367
BstBI	TTCGAA	1 cut(s)	775
BstC8I	GCNNGC	5 cut(s)	252, 298, 321, 1252, 2184
BstDEI	CTNAG	7 cut(s)	246, 255, 499, 719, 1042, 1151, 1290
BstDSI	CCRYGG	1 cut(s)	1572
BstENI	CCTNNNNNAGG	2 cut(s)	578, 2124
BstF5I	GGATG	7 cut(s)	469, 901, 949, 1582, 2248, 2329, 2439
BstFNI	CGCG	4 cut(s)	312, 317, 670, 765
BstHHI	GCGC	4 cut(s)	314, 319, 670, 767
BstMAI	GTCTC	4 cut(s)	416, 1563, 1868, 2061
BstMWI	GCNNNNNNNGC	6 cut(s)	149, 320, 1280, 1797, 2183, 2399
BstNI	CCWGG	2 cut(s)	70, 2341
BstNSI	RCATGY	3 cut(s)	1131, 1863, 2282
BstPAI	GACNNNNGTC	1 cut(s)	1485
BstSCI	CCNGG	3 cut(s)	68, 1695, 2339
BstSFI	CTRYAG	2 cut(s)	1490, 1680
BstUI	CGCG	4 cut(s)	312, 317, 670, 765
BstV2I	GAAGAC	2 cut(s)	121, 148
BstX2I	RGATCY	6 cut(s)	478, 637, 650, 910, 1165, 1301
BstYI	RGATCY	6 cut(s)	478, 637, 650, 910, 1165, 1301
BsuRI	GGCC	1 cut(s)	1734
BtgI	CCRYGG	1 cut(s)	1572
BtsCI	GGATG	7 cut(s)	469, 901, 949, 1582, 2248, 2329, 2439
BveI	ACCTGC	1 cut(s)	518
Cac8I	GCNNGC	5 cut(s)	252, 298, 321, 1252, 2184
CciI	TCATGA	3 cut(s)	364, 811, 2404
CfoI	GCGC	4 cut(s)	314, 319, 670, 767
Cfr13I	GGNCC	1 cut(s)	1688
CseI	GACGC	1 cut(s)	290
DdeI	CTNAG	7 cut(s)	246, 255, 499, 719, 1042, 1151, 1290
Eam1104I	CTCTTC	3 cut(s)	573, 1613, 2224
EarI	CTCTTC	3 cut(s)	573, 1613, 2224
Eco130I	CCWWGG	2 cut(s)	1257, 1572
Eco147I	AGGCCT	1 cut(s)	1734
Eco47I	GGWCC	1 cut(s)	1688
Eco57I	CTGAAG	3 cut(s)	148, 726, 1117
EcoNI	CCTNNNNNAGG	2 cut(s)	578, 2124
EcoRI	GAATTC	1 cut(s)	960
EcoRII	CCWGG	2 cut(s)	68, 2339
EcoT14I	CCWWGG	2 cut(s)	1257, 1572
EcoT22I	ATGCAT	2 cut(s)	210, 1083
ErhI	CCWWGG	2 cut(s)	1257, 1572
Esp3I	CGTCTC	1 cut(s)	416
FalI	AAGNNNNNCTT	4 cut(s)	790, 822, 2221, 2253
FaqI	GGGAC	2 cut(s)	1138, 1458
FauI	CCCGC	1 cut(s)	2175
FbaI	TGATCA	2 cut(s)	1503, 2512
Fnu4HI	GCNGC	1 cut(s)	315
FokI	GGATG	7 cut(s)	476, 908, 956, 1589, 2255, 2336, 2446
Fsp4HI	GCNGC	1 cut(s)	315
FspBI	CTAG	6 cut(s)	12, 822, 1943, 1959, 2484, 2489
GlaI	GCGC	4 cut(s)	313, 318, 669, 766
GluI	GCNGC	1 cut(s)	315
GsuI	CTGGAG	2 cut(s)	1316, 1406
HaeIII	GGCC	1 cut(s)	1734
HapII	CCGG	1 cut(s)	1697
HgaI	GACGC	1 cut(s)	290
HhaI	GCGC	4 cut(s)	314, 319, 670, 767
Hin6I	GCGC	4 cut(s)	312, 317, 668, 765
HinP1I	GCGC	4 cut(s)	312, 317, 668, 765
HindIII	AAGCTT	2 cut(s)	2213, 2235
HinfI	GANTC	3 cut(s)	27, 443, 1190
HpaII	CCGG	1 cut(s)	1697
HphI	GGTGA	3 cut(s)	692, 1273, 2025
Hpy166II	GTNNAC	4 cut(s)	97, 738, 1102, 1264
Hpy188I	TCNGA	7 cut(s)	415, 745, 904, 1480, 1563, 1651, 2008
Hpy8I	GTNNAC	4 cut(s)	97, 738, 1102, 1264
Hpy99I	CGWCG	2 cut(s)	284, 1829
HpyAV	CCTTC	6 cut(s)	610, 684, 740, 1022, 1435, 2424
HpyCH4III	ACNGT	9 cut(s)	101, 190, 427, 760, 1856, 2108, 2163, 2209, 2367
HpyCH4IV	ACGT	1 cut(s)	37
HpyF10VI	GCNNNNNNNGC	6 cut(s)	149, 320, 1280, 1797, 2183, 2399
HpyF3I	CTNAG	7 cut(s)	246, 255, 499, 719, 1042, 1151, 1290
HpySE526I	ACGT	1 cut(s)	37
HspAI	GCGC	4 cut(s)	312, 317, 668, 765
Ksp22I	TGATCA	2 cut(s)	1503, 2512
LmnI	GCTCC	4 cut(s)	70, 1402, 1643, 1960
LweI	GCATC	9 cut(s)	217, 358, 617, 1068, 1653, 1655, 1809, 1943, 2301
MaeI	CTAG	6 cut(s)	12, 822, 1943, 1959, 2484, 2489
MaeII	ACGT	1 cut(s)	37
MaeIII	GTNAC	9 cut(s)	114, 167, 212, 655, 680, 1345, 2108, 2163, 2190
MbiI	CCGCTC	1 cut(s)	1336
MfeI	CAATTG	2 cut(s)	1245, 2195
MflI	RGATCY	6 cut(s)	478, 637, 650, 910, 1165, 1301
MmeI	TCCRAC	3 cut(s)	317, 626, 1797
Mph1103I	ATGCAT	2 cut(s)	210, 1083
MroXI	GAANNNNTTC	3 cut(s)	360, 805, 1721
MslI	CAYNNNNRTG	3 cut(s)	1217, 1989, 2283
MspA1I	CMGCKG	1 cut(s)	1685
MspCI	CTTAAG	1 cut(s)	695
MspI	CCGG	1 cut(s)	1697
MspR9I	CCNGG	3 cut(s)	70, 1697, 2341
MteI	GCGCNGCGC	1 cut(s)	315
MunI	CAATTG	2 cut(s)	1245, 2195
Mva1269I	GAATGC	1 cut(s)	2379
MvaI	CCWGG	2 cut(s)	70, 2341
MvnI	CGCG	4 cut(s)	312, 317, 670, 765
MwoI	GCNNNNNNNGC	6 cut(s)	149, 320, 1280, 1797, 2183, 2399
NciI	CCSGG	1 cut(s)	1697
NcoI	CCATGG	1 cut(s)	1572
NlaIV	GGNNCC	5 cut(s)	66, 639, 912, 1167, 1303
NmuCI	GTSAC	4 cut(s)	114, 680, 2108, 2190
NsiI	ATGCAT	2 cut(s)	210, 1083
NspI	RCATGY	3 cut(s)	1131, 1863, 2282
NspV	TTCGAA	1 cut(s)	775
PagI	TCATGA	3 cut(s)	364, 811, 2404
PasI	CCCWGGG	1 cut(s)	69
PceI	AGGCCT	1 cut(s)	1734
PciI	ACATGT	2 cut(s)	1859, 2278
PctI	GAATGC	1 cut(s)	2379
PdmI	GAANNNNTTC	3 cut(s)	360, 805, 1721
PfeI	GAWTC	3 cut(s)	27, 443, 1190
PflFI	GACNNNGTC	1 cut(s)	998
PflMI	CCANNNNNTGG	1 cut(s)	1895
PfoI	TCCNGGA	1 cut(s)	1695
PkrI	GCNGC	1 cut(s)	316
PscI	ACATGT	2 cut(s)	1859, 2278
PshAI	GACNNNNGTC	1 cut(s)	1485
PshBI	ATTAAT	1 cut(s)	1176
PsiI	TTATAA	1 cut(s)	861
Psp6I	CCWGG	2 cut(s)	68, 2339
PspGI	CCWGG	2 cut(s)	68, 2339
PspN4I	GGNNCC	5 cut(s)	66, 639, 912, 1167, 1303
PspPI	GGNCC	1 cut(s)	1688
PstI	CTGCAG	1 cut(s)	1494
PsuI	RGATCY	6 cut(s)	478, 637, 650, 910, 1165, 1301
PsyI	GACNNNGTC	1 cut(s)	998
PvuII	CAGCTG	1 cut(s)	1685
RseI	CAYNNNNRTG	3 cut(s)	1217, 1989, 2283
SatI	GCNGC	1 cut(s)	315
Sau96I	GGNCC	1 cut(s)	1688
ScaI	AGTACT	2 cut(s)	1156, 2521
ScrFI	CCNGG	3 cut(s)	70, 1697, 2341
SfaNI	GCATC	9 cut(s)	217, 358, 617, 1068, 1653, 1655, 1809, 1943, 2301
SfcI	CTRYAG	2 cut(s)	1490, 1680
SfuI	TTCGAA	1 cut(s)	775
SinI	GGWCC	1 cut(s)	1688
SmiMI	CAYNNNNRTG	3 cut(s)	1217, 1989, 2283
SmlI	CTYRAG	2 cut(s)	695, 965
SmoI	CTYRAG	2 cut(s)	695, 965
SpeI	ACTAGT	3 cut(s)	821, 1942, 2483
SseBI	AGGCCT	1 cut(s)	1734
SsiI	CCGC	5 cut(s)	315, 1281, 1336, 2182, 2472
SspMI	CTAG	6 cut(s)	12, 822, 1943, 1959, 2484, 2489
StuI	AGGCCT	1 cut(s)	1734
StyD4I	CCNGG	3 cut(s)	68, 1695, 2339
StyI	CCWWGG	2 cut(s)	1257, 1572
TaaI	ACNGT	9 cut(s)	101, 190, 427, 760, 1856, 2108, 2163, 2209, 2367
TaiI	ACGT	1 cut(s)	40
TaqI	TCGA	3 cut(s)	42, 775, 990
TatI	WGTACW	6 cut(s)	1144, 1154, 1312, 2017, 2367, 2519
TauI	GCSGC	1 cut(s)	317
TfiI	GAWTC	3 cut(s)	27, 443, 1190
TseFI	GTSAC	4 cut(s)	114, 680, 2108, 2190
Tsp45I	GTSAC	4 cut(s)	114, 680, 2108, 2190
TspGWI	ACGGA	1 cut(s)	1965
Tth111I	GACNNNGTC	1 cut(s)	998
Van91I	CCANNNNNTGG	1 cut(s)	1895
Vha464I	CTTAAG	1 cut(s)	695
VpaK11BI	GGWCC	1 cut(s)	1688
VspI	ATTAAT	1 cut(s)	1176
XagI	CCTNNNNNAGG	2 cut(s)	578, 2124
XapI	RAATTY	5 cut(s)	554, 916, 926, 960, 2136
XceI	RCATGY	3 cut(s)	1131, 1863, 2282
XmnI	GAANNNNTTC	3 cut(s)	360, 805, 1721
XspI	CTAG	6 cut(s)	12, 822, 1943, 1959, 2484, 2489
ZrmI	AGTACT	2 cut(s)	1156, 2521
Zsp2I	ATGCAT	2 cut(s)	210, 1083

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.