Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0000934

Physical Location & Seq

Genomic Coordinates Forward (+)

518086 .. 520166

Gene Structure 2081 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG004500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGCAGGTTTATGTACTTGCTTTTTCGGAGAGTGGGTTAATCAACCTTGTTCACAAGGATTGCAGAATGGCAATCGTCCTCCTGATTGTGATGATTGTCATTATGGCTCTCTTCCTCTTTAGTTATTTTTTCCTAATGCTGGCTGCTGCCAAACGGGAGATTCAACTTTGTACCAAACTCATAAAACAAGATGAGGCAATTCGACAAGCTGAGACAAAGAGTATGAAAAAATCTGATGCAATTACAAGTGCAAGCCATGATGTTCGTAATGCTCTTGCTTGCATGACTGAATTGATCAAGATATCCTGCAATGAAGTTTCCCAGGGCTCCGAAATAAAGAAATATCTAACACAAATGGAGGCATGTACTAAACACCTCTTAGGTATTTTGAACTCTATTCTTGATAAAAGCAAAATTGAAGCGGGTAAGATGGTACTTGAAGATGAGGAATTTGACATATTCCAACTTGTTGAAGAGGTAATAGATTTCTTTCTTCCATCGGGTTTAAAGAAGGGCGTAGATGTGATGTTGGATCCATATGATAGCTCACTTCTAAAGTTTGCACATGTGAGAGGTGATAGGGGAAGGCTTAAGCAAATATTATGCAACTTATTAGGGAATGCTGTCAAATTTACTTCAGAGGGACATGTAACCGTTCGTGCTTGGGTTCAGAAACCTAGTTTCATGAATTCAATCACTGCTGCTGATTCTGATCAGAATAATGGTTTCTTGAAGCATTTGTTGTGTTTTTTGAACTACAAGAACATGACCAAAGAACAGTCAGATGGCATAAAAGCAGCGAATGGTGTTCAACATGATCCAAATTATTTGGAATTTGTTTTTGAGGTGGATGATTCAGGGAGGGGAATTCCCAAGGAGAAGCAAAAAGAAGTGTTTGAAAACTATGTCCAAGTCAAAGAAAAAGCTCATGGAGAAGGAGGTACTGGCTTAGGACTTGGTATCGTTCAGTCTCTGGTACGCTTGATGCACGGAGAAATAGGAATTGTGGACAAGGAGATTGGTGAAAAAGGGACATGCTTCAGGTTTAATGTTCTCCTGAGAGCTATTAATGTGTGTGAGGATCATATAAAATTACAACAAGACCTTGAATTGGGAGGTGACCCTAGTTGTGATGACAGAGATCAACAATTGGGATTAATAGCAAATGCAAACCCCAGGTTGACCATAATTCCTAGTCCAAATCTCACACCAATTGGAAGTCCTAGGTTGAATGTATTCTGCACCACCCCTAGTAGTGCTAAGGTAGAGGAATCCACTGTTGTACTACTGATTAAAAATGAAGAGCGGCGGAGAATAGTATACCAGTTCATGAAGAGCAGCCTTGGGATAAAGGTATCAGTGGTAGAACAATGGGGACAACTAGCTCATACTCTCAAGAAAATAAAACACATGAGGATGAAGGGTCATCCTAGTTCATCTTCAGGAATATCTGATTTGGGTCTGCAGGATTGCTTGAGCAAATCTACACCATGCAACTCCGGTAATAGAGCAAAGGAGGTGCACCCTTTAATGAGTGCTATGGATGAAACGTACAATAATATGTGCTCTCTATTTAAGAAGACGACTACCAATGTTGGTGGTGCACCCGCCTTTATATTGCTAGTGATAGATACGACAGCTGGACCATATATGCAATTATGTAAGATTATAACTGAGTTCAAAAGAGGCCTTCAAAATGCTTGGTGCAGGACCGTTTGGTTAGAAAATCCAGTCTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009553 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009888 GO:0009987 GO:0010033 GO:0010087 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0018106 GO:0018193 GO:0018202 GO:0019538 GO:0023052 GO:0030054 GO:0032501 GO:0032502 GO:0032870 GO:0036211 GO:0040007 GO:0042221 GO:0042802 GO:0042803 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046983 GO:0048229 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0071704 GO:0071944 GO:0080117 GO:0080190 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HATPase_c HisKA Response_reg

Protein Analysis

579

Amino Acids

64.49

Weight (kDa)

7.82

Isoelectric Point (pI)

34.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HisKA	PF00512	77 - 142	1.3e-06	His Kinase A (phospho-acceptor) domain
HATPase_c	PF02518	278 - 352	9.3e-15	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000934)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02090
fragaria_vesca	FvH4_2g00520 FvH4_5g39340 FvH4_5g39350
malus_domestica	MD03G1295900.v1.1 MD03G1296400.v1.1 MD11G1315000.v1.1 MD11G1315800.v1.1
prunus_persica	Prupe.8G031600_v2.0.a1 Prupe.8G270900_v2.0.a1 Prupe.8G271500_v2.0.a1
pyrus_communis	pycom03g23400 pycom03g23460 pycom11g27520 pycom11g27570
rosa_chinensis	RchiOBHm_Chr6g0250521 RchiOBHm_Chr6g0250591 RchiOBHm_Chr6g0250601 RchiOBHm_Chr6g0250841 RchiOBHm_Chr7g0241621 RchiOBHm_Chr7g0241631
rosa_laevigata	RLG00000000559 RLG00000000560 RLG00000015494 RLG00000015498 RLG00000015520 RLG00000015530 RLG00000015533 RLG00000015535
rosa_multiflora	Rmu_co8325851.1_g000001 Rmu_co8374241.1_g000001 Rmu_co8391029.1_g000001 Rmu_sc0002268.1_g000012 Rmu_sc0002268.1_g000013 Rmu_sc0007248.1_g000005 Rmu_sc0033402.1_g000001
rosa_roxburghii	Rroxscaffold_3G00218870 Rroxscaffold_7G00217140 Rroxscaffold_7G00217190
rosa_rugosa	Rorug07G0345700 Rorug07G0345800
rosa_samantha	Rh6AG006300 Rh6AG007200 Rh6AG007300 Rh6BG003700 Rh6BG004300 Rh6CG004500 Rh6DG004500 Rh6DG005300 Rh7AG500200 Rh7AG500300 Rh7BG471300 Rh7BG471400 Rh7CG516700 Rh7CG516800 Rh7DG485200 Rh7DG485300
rosa_wichuraiana	Rw0G020910 Rw6G000690 Rw6G000760 Rw6G000800 Rw6G000850 Rw7G042250 Rw7G042260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1670
AccBSI	CCGCTC	1 cut(s)	1306
AccI	GTMKAC	1 cut(s)	1320
AciI	CCGC	4 cut(s)	422, 1306, 1309, 1608
AclWI	GGATC	4 cut(s)	527, 540, 812, 1089
AcsI	RAATTY	5 cut(s)	449, 629, 688, 833, 867
AcuI	CTGAAG	3 cut(s)	621, 1024, 1425
AfaI	GTAC	8 cut(s)	15, 172, 367, 435, 943, 978, 1284, 1553
AfiI	CCNNNNNNNGG	2 cut(s)	139, 1111
AflII	CTTAAG	1 cut(s)	590
AflIII	ACRYGT	2 cut(s)	565, 646
AjnI	CCWGG	2 cut(s)	321, 1175
AluBI	AGCT	6 cut(s)	209, 546, 926, 1064, 1385, 1640
AluI	AGCT	6 cut(s)	209, 546, 926, 1064, 1385, 1640
Alw21I	GWGCWC	3 cut(s)	1524, 1568, 1606
Alw26I	GTCTC	2 cut(s)	206, 975
Alw44I	GTGCAC	2 cut(s)	1520, 1602
AlwI	GGATC	4 cut(s)	527, 540, 812, 1089
AlwNI	CAGNNNCTG	1 cut(s)	973
AoxI	GGCC	1 cut(s)	1687
ApaLI	GTGCAC	2 cut(s)	1520, 1602
ApeKI	GCWGC	5 cut(s)	143, 146, 701, 797, 1338
ApoI	RAATTY	5 cut(s)	449, 629, 688, 833, 867
AseI	ATTAAT	2 cut(s)	1068, 1157
Asp700I	GAANNNNTTC	1 cut(s)	1235
AspA2I	CCTAGG	1 cut(s)	1223
AspS9I	GGNCC	2 cut(s)	1643, 1710
AsuHPI	GGTGA	3 cut(s)	587, 1034, 1130
AvaII	GGWCC	2 cut(s)	1643, 1710
AvrII	CCTAGG	1 cut(s)	1223
BaeGI	GKGCMC	2 cut(s)	1524, 1606
BamHI	GGATCC	1 cut(s)	532
BanII	GRGCYC	1 cut(s)	329
BbsI	GAAGAC	1 cut(s)	1586
Bbv12I	GWGCWC	3 cut(s)	1524, 1568, 1606
BbvI	GCAGC	5 cut(s)	130, 133, 688, 809, 1350
BccI	CCATC	3 cut(s)	424, 505, 779
BciT130I	CCWGG	2 cut(s)	323, 1177
BclI	TGATCA	2 cut(s)	294, 712
BcoDI	GTCTC	2 cut(s)	206, 975
BfaI	CTAG	8 cut(s)	678, 1125, 1194, 1224, 1251, 1382, 1431, 1622
BfmI	CTRYAG	1 cut(s)	1463
BfrI	CTTAAG	1 cut(s)	590
BisI	GCNGC	6 cut(s)	144, 147, 702, 798, 1307, 1339
BlnI	CCTAGG	1 cut(s)	1223
BlsI	GCNGC	6 cut(s)	145, 148, 703, 799, 1308, 1340
Bme1390I	CCNGG	2 cut(s)	323, 1177
Bme18I	GGWCC	2 cut(s)	1643, 1710
BmgT120I	GGNCC	2 cut(s)	1643, 1710
BmiI	GGNNCC	2 cut(s)	328, 534
BmrFI	CCNGG	2 cut(s)	323, 1177
BmsI	GCATC	2 cut(s)	226, 975
BpiI	GAAGAC	1 cut(s)	1586
Bpu10I	CCTNAGC	2 cut(s)	949, 1260
BpuEI	CTTGAG	2 cut(s)	1379, 1495
BsaBI	GATNNNNATC	1 cut(s)	711
BsaJI	CCNNGG	6 cut(s)	321, 322, 873, 1175, 1223, 1342
BsaWI	WCCGGW	1 cut(s)	1499
BsaXI	ACNNNNNCTCC	2 cut(s)	20, 50
Bsc4I	CCNNNNNNNGG	2 cut(s)	139, 1111
Bse1I	ACTGG	3 cut(s)	949, 1324, 1730
Bse3DI	GCAATG	1 cut(s)	316
Bse8I	GATNNNNATC	1 cut(s)	711
BseBI	CCWGG	2 cut(s)	323, 1177
BseDI	CCNNGG	6 cut(s)	321, 322, 873, 1175, 1223, 1342
BseGI	GGATG	4 cut(s)	856, 1422, 1426, 1549
BseJI	GATNNNNATC	1 cut(s)	711
BseLI	CCNNNNNNNGG	2 cut(s)	139, 1111
BseMI	GCAATG	1 cut(s)	316
BseMII	CTCAG	3 cut(s)	201, 1049, 1665
BseNI	ACTGG	3 cut(s)	949, 1324, 1730
BseSI	GKGCMC	2 cut(s)	1524, 1606
BseXI	GCAGC	5 cut(s)	130, 133, 688, 809, 1350
BsgI	GTGCAG	2 cut(s)	1225, 1726
BshFI	GGCC	1 cut(s)	1689
BsiHKAI	GWGCWC	3 cut(s)	1524, 1568, 1606
BsiSI	CCGG	1 cut(s)	1500
BslFI	GGGAC	3 cut(s)	657, 1045, 1389
BslI	CCNNNNNNNGG	2 cut(s)	139, 1111
BsmAI	GTCTC	2 cut(s)	206, 975
BsmFI	GGGAC	3 cut(s)	657, 1045, 1389
BsmI	GAATGC	1 cut(s)	625
BsnI	GGCC	1 cut(s)	1689
Bsp1286I	GDGCHC	4 cut(s)	329, 1524, 1568, 1606
Bsp143I	GATC	6 cut(s)	294, 532, 712, 817, 1081, 1141
BspACI	CCGC	4 cut(s)	422, 1306, 1309, 1608
BspANI	GGCC	1 cut(s)	1689
BspCNI	CTCAG	3 cut(s)	202, 1050, 1666
BspHI	TCATGA	2 cut(s)	684, 1329
BspLI	GGNNCC	2 cut(s)	328, 534
BspMAI	CTGCAG	1 cut(s)	1467
BspPI	GGATC	4 cut(s)	527, 540, 812, 1089
BspQI	GCTCTTC	2 cut(s)	1296, 1328
BspTI	CTTAAG	1 cut(s)	590
BsrBI	CCGCTC	1 cut(s)	1306
BsrDI	GCAATG	1 cut(s)	316
BsrI	ACTGG	3 cut(s)	949, 1324, 1730
BssECI	CCNNGG	6 cut(s)	321, 322, 873, 1175, 1223, 1342
BssMI	GATC	6 cut(s)	294, 532, 712, 817, 1081, 1141
BssNAI	GTATAC	1 cut(s)	1321
BssT1I	CCWWGG	3 cut(s)	873, 1223, 1342
Bst1107I	GTATAC	1 cut(s)	1321
Bst2UI	CCWGG	2 cut(s)	323, 1177
Bst4CI	ACNGT	4 cut(s)	655, 780, 1279, 1714
Bst6I	CTCTTC	4 cut(s)	116, 468, 1296, 1328
BstAFI	CTTAAG	1 cut(s)	590
BstC8I	GCNNGC	3 cut(s)	141, 253, 280
BstDEI	CTNAG	6 cut(s)	210, 379, 949, 1058, 1260, 1674
BstEII	GGTNACC	1 cut(s)	1118
BstF5I	GGATG	4 cut(s)	856, 1422, 1426, 1549
BstKTI	GATC	6 cut(s)	297, 535, 715, 820, 1084, 1144
BstMAI	GTCTC	2 cut(s)	206, 975
BstMBI	GATC	6 cut(s)	294, 532, 712, 817, 1081, 1141
BstNI	CCWGG	2 cut(s)	323, 1177
BstNSI	RCATGY	4 cut(s)	366, 569, 650, 1038
BstPI	GGTNACC	1 cut(s)	1118
BstSCI	CCNGG	2 cut(s)	321, 1175
BstSFI	CTRYAG	1 cut(s)	1463
BstSLI	GKGCMC	2 cut(s)	1524, 1606
BstV1I	GCAGC	5 cut(s)	130, 133, 688, 809, 1350
BstV2I	GAAGAC	1 cut(s)	1586
BstX2I	RGATCY	1 cut(s)	532
BstYI	RGATCY	1 cut(s)	532
BstZ17I	GTATAC	1 cut(s)	1321
BsuRI	GGCC	1 cut(s)	1689
BtsCI	GGATG	4 cut(s)	856, 1422, 1426, 1549
BtsI	GCAGTG	1 cut(s)	696
BtsIMutI	CAGTG	3 cut(s)	696, 1275, 1365
Cac8I	GCNNGC	3 cut(s)	141, 253, 280
CaiI	CAGNNNCTG	1 cut(s)	973
CciI	TCATGA	2 cut(s)	684, 1329
Cfr13I	GGNCC	2 cut(s)	1643, 1710
Csp6I	GTAC	8 cut(s)	14, 171, 366, 434, 942, 977, 1283, 1552
CspCI	CAANNNNNGTGG	2 cut(s)	1579, 1614
CviQI	GTAC	8 cut(s)	14, 171, 366, 434, 942, 977, 1283, 1552
DdeI	CTNAG	6 cut(s)	210, 379, 949, 1058, 1260, 1674
DpnI	GATC	6 cut(s)	296, 534, 714, 819, 1083, 1143
DpnII	GATC	6 cut(s)	294, 532, 712, 817, 1081, 1141
DraI	TTTAAA	1 cut(s)	507
Eam1104I	CTCTTC	4 cut(s)	116, 468, 1296, 1328
EarI	CTCTTC	4 cut(s)	116, 468, 1296, 1328
EciI	GGCGGA	1 cut(s)	1324
Eco130I	CCWWGG	3 cut(s)	873, 1223, 1342
Eco147I	AGGCCT	1 cut(s)	1689
Eco24I	GRGCYC	1 cut(s)	329
Eco32I	GATATC	1 cut(s)	303
Eco47I	GGWCC	2 cut(s)	1643, 1710
Eco57I	CTGAAG	3 cut(s)	621, 1024, 1425
Eco91I	GGTNACC	1 cut(s)	1118
EcoO65I	GGTNACC	1 cut(s)	1118
EcoRI	GAATTC	2 cut(s)	688, 867
EcoRII	CCWGG	2 cut(s)	321, 1175
EcoRV	GATATC	1 cut(s)	303
EcoT14I	CCWWGG	3 cut(s)	873, 1223, 1342
EcoT38I	GRGCYC	1 cut(s)	329
ErhI	CCWWGG	3 cut(s)	873, 1223, 1342
FaqI	GGGAC	3 cut(s)	657, 1045, 1389
FauI	CCCGC	2 cut(s)	415, 1615
FauNDI	CATATG	1 cut(s)	538
FbaI	TGATCA	2 cut(s)	294, 712
FblI	GTMKAC	1 cut(s)	1320
Fnu4HI	GCNGC	6 cut(s)	144, 147, 702, 798, 1307, 1339
FokI	GGATG	4 cut(s)	863, 1413, 1429, 1556
FriOI	GRGCYC	1 cut(s)	329
Fsp4HI	GCNGC	6 cut(s)	144, 147, 702, 798, 1307, 1339
FspBI	CTAG	8 cut(s)	678, 1125, 1194, 1224, 1251, 1382, 1431, 1622
GluI	GCNGC	6 cut(s)	144, 147, 702, 798, 1307, 1339
HaeIII	GGCC	1 cut(s)	1689
HapII	CCGG	1 cut(s)	1500
HincII	GTYRAC	1 cut(s)	1182
HindII	GTYRAC	1 cut(s)	1182
HinfI	GANTC	4 cut(s)	160, 707, 854, 1271
HpaII	CCGG	1 cut(s)	1500
HphI	GGTGA	3 cut(s)	587, 1034, 1130
Hpy166II	GTNNAC	6 cut(s)	52, 1009, 1182, 1321, 1522, 1604
Hpy188I	TCNGA	9 cut(s)	28, 235, 331, 640, 672, 712, 717, 784, 1453
Hpy188III	TCNNGA	9 cut(s)	82, 298, 401, 685, 730, 1057, 1330, 1396, 1443
Hpy8I	GTNNAC	6 cut(s)	52, 1009, 1182, 1321, 1522, 1604
HpyAV	CCTTC	5 cut(s)	505, 579, 929, 1414, 1700
HpyCH4III	ACNGT	4 cut(s)	655, 780, 1279, 1714
HpyCH4IV	ACGT	1 cut(s)	1550
HpyF3I	CTNAG	6 cut(s)	210, 379, 949, 1058, 1260, 1674
HpySE526I	ACGT	1 cut(s)	1550
Ksp22I	TGATCA	2 cut(s)	294, 712
Kzo9I	GATC	6 cut(s)	294, 532, 712, 817, 1081, 1141
LguI	GCTCTTC	2 cut(s)	1296, 1328
LmnI	GCTCC	1 cut(s)	332
Lsp1109I	GCAGC	5 cut(s)	130, 133, 688, 809, 1350
LweI	GCATC	2 cut(s)	226, 975
MaeI	CTAG	8 cut(s)	678, 1125, 1194, 1224, 1251, 1382, 1431, 1622
MaeII	ACGT	1 cut(s)	1550
MaeIII	GTNAC	2 cut(s)	649, 1118
MalI	GATC	6 cut(s)	296, 534, 714, 819, 1083, 1143
MbiI	CCGCTC	1 cut(s)	1306
MboI	GATC	6 cut(s)	294, 532, 712, 817, 1081, 1141
MboII	GAAGA	8 cut(s)	103, 452, 485, 485, 1313, 1345, 1431, 1591
MfeI	CAATTG	2 cut(s)	1148, 1212
MflI	RGATCY	1 cut(s)	532
MhlI	GDGCHC	4 cut(s)	329, 1524, 1568, 1606
MmeI	TCCRAC	2 cut(s)	487, 510
MroXI	GAANNNNTTC	1 cut(s)	1235
MseI	TTAA	9 cut(s)	38, 506, 591, 1047, 1068, 1157, 1293, 1529, 1575
MslI	CAYNNNNRTG	1 cut(s)	1415
MspA1I	CMGCKG	1 cut(s)	1640
MspCI	CTTAAG	1 cut(s)	590
MspI	CCGG	1 cut(s)	1500
MspR9I	CCNGG	2 cut(s)	323, 1177
MunI	CAATTG	2 cut(s)	1148, 1212
Mva1269I	GAATGC	1 cut(s)	625
MvaI	CCWGG	2 cut(s)	323, 1177
NdeI	CATATG	1 cut(s)	538
NdeII	GATC	6 cut(s)	294, 532, 712, 817, 1081, 1141
NlaIV	GGNNCC	2 cut(s)	328, 534
NmuCI	GTSAC	1 cut(s)	1118
NspI	RCATGY	4 cut(s)	366, 569, 650, 1038
PagI	TCATGA	2 cut(s)	684, 1329
PasI	CCCWGGG	1 cut(s)	322
PceI	AGGCCT	1 cut(s)	1689
PciI	ACATGT	2 cut(s)	565, 646
PciSI	GCTCTTC	2 cut(s)	1296, 1328
PctI	GAATGC	1 cut(s)	625
PdmI	GAANNNNTTC	1 cut(s)	1235
PfeI	GAWTC	4 cut(s)	160, 707, 854, 1271
PkrI	GCNGC	6 cut(s)	145, 148, 703, 799, 1308, 1340
PscI	ACATGT	2 cut(s)	565, 646
PshBI	ATTAAT	2 cut(s)	1068, 1157
PsiI	TTATAA	1 cut(s)	1670
Psp6I	CCWGG	2 cut(s)	321, 1175
PspEI	GGTNACC	1 cut(s)	1118
PspGI	CCWGG	2 cut(s)	321, 1175
PspN4I	GGNNCC	2 cut(s)	328, 534
PspPI	GGNCC	2 cut(s)	1643, 1710
PstI	CTGCAG	1 cut(s)	1467
PstNI	CAGNNNCTG	1 cut(s)	973
PsuI	RGATCY	1 cut(s)	532
PvuII	CAGCTG	1 cut(s)	1640
RsaI	GTAC	8 cut(s)	15, 172, 367, 435, 943, 978, 1284, 1553
RsaNI	GTAC	8 cut(s)	14, 171, 366, 434, 942, 977, 1283, 1552
RseI	CAYNNNNRTG	1 cut(s)	1415
SapI	GCTCTTC	2 cut(s)	1296, 1328
SaqAI	TTAA	9 cut(s)	38, 506, 591, 1047, 1068, 1157, 1293, 1529, 1575
SatI	GCNGC	6 cut(s)	144, 147, 702, 798, 1307, 1339
Sau3AI	GATC	6 cut(s)	294, 532, 712, 817, 1081, 1141
Sau96I	GGNCC	2 cut(s)	1643, 1710
ScrFI	CCNGG	2 cut(s)	323, 1177
SduI	GDGCHC	4 cut(s)	329, 1524, 1568, 1606
SfaNI	GCATC	2 cut(s)	226, 975
SfcI	CTRYAG	1 cut(s)	1463
SinI	GGWCC	2 cut(s)	1643, 1710
SmiMI	CAYNNNNRTG	1 cut(s)	1415
SmlI	CTYRAG	3 cut(s)	590, 1394, 1474
SmoI	CTYRAG	3 cut(s)	590, 1394, 1474
SseBI	AGGCCT	1 cut(s)	1689
SsiI	CCGC	4 cut(s)	422, 1306, 1309, 1608
SspI	AATATT	1 cut(s)	600
SspMI	CTAG	8 cut(s)	678, 1125, 1194, 1224, 1251, 1382, 1431, 1622
StuI	AGGCCT	1 cut(s)	1689
StyD4I	CCNGG	2 cut(s)	321, 1175
StyI	CCWWGG	3 cut(s)	873, 1223, 1342
TaaI	ACNGT	4 cut(s)	655, 780, 1279, 1714
TaiI	ACGT	1 cut(s)	1553
TaqI	TCGA	1 cut(s)	202
TatI	WGTACW	3 cut(s)	13, 365, 1282
TauI	GCSGC	1 cut(s)	1309
TfiI	GAWTC	4 cut(s)	160, 707, 854, 1271
Tru1I	TTAA	9 cut(s)	38, 506, 591, 1047, 1068, 1157, 1293, 1529, 1575
Tru9I	TTAA	9 cut(s)	38, 506, 591, 1047, 1068, 1157, 1293, 1529, 1575
TscAI	CASTG	3 cut(s)	703, 1282, 1365
TseFI	GTSAC	1 cut(s)	1118
TseI	GCWGC	5 cut(s)	143, 146, 701, 797, 1338
Tsp45I	GTSAC	1 cut(s)	1118
TspGWI	ACGGA	1 cut(s)	1005
TspRI	CASTG	3 cut(s)	703, 1282, 1365
Vha464I	CTTAAG	1 cut(s)	590
VneI	GTGCAC	2 cut(s)	1520, 1602
VpaK11BI	GGWCC	2 cut(s)	1643, 1710
VspI	ATTAAT	2 cut(s)	1068, 1157
XapI	RAATTY	5 cut(s)	449, 629, 688, 833, 867
XceI	RCATGY	4 cut(s)	366, 569, 650, 1038
XmaJI	CCTAGG	1 cut(s)	1223
XmiI	GTMKAC	1 cut(s)	1320
XmnI	GAANNNNTTC	1 cut(s)	1235
XspI	CTAG	8 cut(s)	678, 1125, 1194, 1224, 1251, 1382, 1431, 1622

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.