MD11G1315000.v1.1

Histidine kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
42723278 .. 42727157
3880 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1315000.v1.1.491

Sequence Viewer

Length: 2706 bp
ATGAAACTCCACTCATTGAAAGTGCTTGTGAGGCATGTTTTCTTTGTCTTGCTGGCAACTTGCGTGCTGGTACTTGCATGCTTGTTGGTCGGCATCATCAAGCATATCGAGCATAATGCACAGGCTTATAATGTTCTACCGACTTCCCCTCAAATTAGGTCAATCAGTCTTGTTCTCAAGGACTGCGAGGTGGCATTCATCCTCCTCATTGTAATGATTGGCATTATGGGCTTCTTCATTTTCAGTTATATTTACGTAATGCATAGTTCGGGAAGACGAGAGATGCATTTGTGTAATACATTGATCAAGCAAATGGAGGCCACCCAACAAGCAGAGAGAAAGAGCATGAATAAAAGCCTTGCATTTGCTACTGCAAGCCATGACATTCGTGCTGCTCTAGCCGGAATCACAGGCTTGATTGAGATATCTAAAGAAGAAGTTTCCCCAGGTTCCGAGTTGGAGACAAATTTAAGGCAGATGGAAACTTGTGCTAGAGATCTCTTTGGTATATTGAACTCTATTCTTGATACGAGTAAGATTGAAGCTGGGAAAATCCAACTTGAAGAAGAGGAATTCGATGTGGCGCAACTTGTTGAAGATGTAGTTGACTTGTATCATCCTGTGGGCTTGAAAAAAGGCATAGATGTGGTGTTGGATCCTCACGATGGCTCTCTAATTAAGTTTCCGTGTGCGGTAGGTGACAGGGGAAGACTTAAGCAGATATTATGTAACTTAATAAGCAATGCTGTCAAATTTACCTCGGAGGGACATGTCACAGTCCGTGCTTGGGTCGAAAAACCCAGCTTTAAGAACTCAATAGCTGCTTCTGGCAAGGGCAATGGTGTTGCAAGACAACTGTTGTACTTGTTTAATCACAACAACAAAGCACAAGCAGACATGGGAACAATGAAGCATGACCCAAATGCCTTGGAATTTGTTTTCGAGGTGGATGATACAGGGAAGGGAATTCCAAAGGAAAAGCAAAAATCAGTGTTTGAAAACTATGTCCAAGTTAAAGAAACGGCTCTTGGAGAAGGAGGCACTGGCTTAGGACTTGGCATTGTTCAATCTCTGGTACGTTTGATGCATGGAGAGATAGGAATTGTGGACAAGGAGATGGGCGAAAGAGGCACATGCTTTAGGTTTAGTGTTCTATTAACTTTACGTGAGAATGTCTCCAAGGATAGCACGAAAGAAGTGGACATTGAAATGGGATTTGGCCCAGGTGATTTGGGGATACTAGTCACTCACACTCCGAGTACTCCCGGATTGAGCATTCACACGCCAAGCCCCAGGTTGAACATTCGAACCCCATGTAGTACTCCTAAGGTTGATGGATCAGGATCATCCGTCGTCTTGTTGATTAAGAATGAAGAGCGTCGCAGAATTTCCCAAAAATTCATGGAAAACCTTGGGATAAAAGTATTCGTGGCAGAACAATGGGAACAACTTTCTCAAACTCTAGAGAAAGTAACTAAACACAAGGGGGGTTACCATTCTCTTCATCATAGCTCTTCAAGAATATCTGAGGTGGGTTTGCAAGACTGCTTGAGCAAATCCACATCATGCAACTCTAGCAACAGAGTAAACGAGGTGCCTTTGATCAGCGCAATGGACGGGAGTGGAACTGAAAACAACAGCAGCAGCAACAACATGCTCCCTCTTTCTCTCTTTAAAAAGACGAGCCTTCGAGGTGCAACGGGGTTTGTGTTGGTAGTGGTTGATGCCACAGCTGGACCCTTTTCAGAACTATGTAAGATTGTGACTGAATTCAAAACGGATCATCACCAGAATAGTACTAGGAATTGCAATTGGTGCAGGGTTGTTTGGTTAGCAAGTCATAGCATCAATTTGAATGATCGTGATATGTTTGATCCAGAGGATGTAATCAAACACAAGGCGCTTCATGGTAGCCGCCTATACGAAGTGGTGAGACTTCTTCCGGAGTTTGGGGGTGCATTACCTAAGAGAAGGGCCACAATTCAGCAGCTTCCACACCAGGTTGGAAAAGCGTCTAGAGCTCCTGCTAGTTCCTCAATATCACATCAACATCGATCATATAATTATCAGTTTGATCATTCAACTGACGATGAAATTGAAGTATCGCAAGACCATAGTAATATTGGTGGTAGTTCAGGTAATGAGACCCCTCGCAAGAAAATATTTTCGCCAACGCTGACTCACCAATATCTGTCTCATGTTGGCTCCTCCACATCAAGAAACTCACAGATTCTAGTTCCTCCTAGAGATCAAACACAAGAACATGTCAGCAATCCGAACAGGCCCTTGATTGGAAAGAAATTTTTGGTTGCTGATGACATAGAATTGAACCGCAAGCTAGCTCAAATTAACTTGACAAGGCTGGGTGCAACTGTGGAGCTTTGTGGAAATGGAAGAGAAGCTCTAGATCTCGTTCGCGGTGCTCTCGCGAATCAAGGGAAACATGGATTCGATTATATACTAATGGATTGTGAGATGCCGGAAATGGATGGGTTCGAAGCAACAAGGCAAATAAGGAGAGAGGAGGAGCCTTATAATCTTCACATTCCCATCATTGCATTGACAGGTCACGCATCGGGAGAGGAAAGAAGCCGAAGGATGGAAGCTGGCATGGACGATCATTTGAGCAAACCGTTTCAAAGAGAACAACTGCTTGAAAAAACGAGACGCATTGACGATAGAAACAAATTAAAAGAAAAATGTTAG

Protein Analysis

902

Amino Acids

100.05

Weight (kDa)

7.23

Isoelectric Point (pI)

38.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HisKA PF00512 118 - 183 2.7e-09 His Kinase A (phospho-acceptor) domain
HATPase_c PF02518 305 - 385 2.3e-14 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response_reg PF00072 769 - 887 2.4e-23 Response regulator receiver domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 129, 2535
AccB1I GGYRCC 1 cut(s) 1594
AccII CGCG 2 cut(s) 2418, 2429
AccIII TCCGGA 1 cut(s) 1942
AciI CCGC 4 cut(s) 692, 1915, 2332, 2418
AclWI GGATC 6 cut(s) 650, 663, 1345, 1351, 1788, 1868
AcsI RAATTY 9 cut(s) 466, 572, 752, 932, 966, 1386, 1397, 1769, 2300
AfaI GTAC 6 cut(s) 72, 863, 1077, 1261, 1321, 1798
AfiI CCNNNNNNNGG 5 cut(s) 665, 787, 1949, 2291, 2599
AflII CTTAAG 1 cut(s) 713
AflIII ACRYGT 2 cut(s) 769, 2263
AhlI ACTAGT 1 cut(s) 1240
AjnI CCWGG 4 cut(s) 445, 1222, 1292, 1998
AjuI GAANNNNNNNTTGG 4 cut(s) 1011, 1043, 1200, 1232
Alw21I GWGCWC 2 cut(s) 2023, 2425
Alw26I GTCTC 6 cut(s) 455, 1180, 1927, 2138, 2199, 2659
AlwI GGATC 6 cut(s) 650, 663, 1345, 1351, 1788, 1868
Aor13HI TCCGGA 1 cut(s) 1942
AoxI GGCC 4 cut(s) 318, 1219, 1974, 2282
ApeKI GCWGC 5 cut(s) 392, 821, 1641, 1644, 1987
ApoI RAATTY 9 cut(s) 466, 572, 752, 932, 966, 1386, 1397, 1769, 2300
AspLEI GCGC 3 cut(s) 586, 1610, 1903
AspS9I GGNCC 4 cut(s) 1220, 1736, 1974, 2283
AsuC2I CCSGG 1 cut(s) 1266
AsuHPI GGTGA 5 cut(s) 710, 1238, 1778, 1942, 2174
AsuII TTCGAA 2 cut(s) 1306, 2496
AsuNHI GCTAGC 1 cut(s) 2338
AvaII GGWCC 1 cut(s) 1736
AxyI CCTNAGG 1 cut(s) 1326
BamHI GGATCC 1 cut(s) 655
BanI GGYRCC 1 cut(s) 1594
BanII GRGCYC 1 cut(s) 2023
BbsI GAAGAC 2 cut(s) 280, 715
Bbv12I GWGCWC 2 cut(s) 2023, 2425
BbvI GCAGC 5 cut(s) 379, 808, 1653, 1656, 1999
BccI CCATC 7 cut(s) 472, 659, 1111, 1328, 2483, 2558, 2593
BceAI ACGGC 1 cut(s) 1038
BcgI CGANNNNNNTGC 2 cut(s) 98, 132
BciT130I CCWGG 4 cut(s) 447, 1224, 1294, 2000
BciVI GTATCC 1 cut(s) 1230
BclI TGATCA 3 cut(s) 303, 1602, 2074
BcnI CCSGG 1 cut(s) 1266
BcoDI GTCTC 6 cut(s) 455, 1180, 1927, 2138, 2199, 2659
BcuI ACTAGT 1 cut(s) 1240
BfoI RGCGCY 1 cut(s) 1904
BfrI CTTAAG 1 cut(s) 713
BfuI GTATCC 1 cut(s) 1230
BglII AGATCT 2 cut(s) 496, 2407
BisI GCNGC 6 cut(s) 393, 822, 1642, 1645, 1915, 1988
BlsI GCNGC 6 cut(s) 394, 823, 1643, 1646, 1916, 1989
BmcAI AGTACT 3 cut(s) 1261, 1321, 1798
Bme1390I CCNGG 5 cut(s) 447, 1224, 1266, 1294, 2000
Bme18I GGWCC 1 cut(s) 1736
BmgT120I GGNCC 4 cut(s) 1220, 1736, 1974, 2283
BmiI GGNNCC 6 cut(s) 451, 657, 1596, 1738, 2206, 2529
BmrFI CCNGG 5 cut(s) 447, 1224, 1266, 1294, 2000
BmsI GCATC 7 cut(s) 102, 273, 1074, 1714, 1854, 2466, 2582
BmtI GCTAGC 1 cut(s) 2342
BpiI GAAGAC 2 cut(s) 280, 715
BplI GAGNNNNNCTC 2 cut(s) 1160, 1192
Bpu10I CCTNAGC 1 cut(s) 1048
Bpu14I TTCGAA 2 cut(s) 1306, 2496
BpuEI CTTGAG 2 cut(s) 161, 1570
BpuMI CCSGG 1 cut(s) 1266
Bsa29I ATCGAT 1 cut(s) 2053
BsaAI YACGTR 2 cut(s) 256, 1166
BsaBI GATNNNNATC 1 cut(s) 1342
BsaI GGTCTC 1 cut(s) 2138
BsaJI CCNNGG 7 cut(s) 445, 759, 927, 1179, 1222, 1292, 1411
BsaWI WCCGGW 1 cut(s) 1942
BsaXI ACNNNNNCTCC 2 cut(s) 1237, 1267
Bsc4I CCNNNNNNNGG 5 cut(s) 665, 787, 1949, 2291, 2599
Bse1I ACTGG 1 cut(s) 1048
Bse21I CCTNAGG 1 cut(s) 1326
Bse3DI GCAATG 4 cut(s) 748, 844, 1617, 2553
Bse8I GATNNNNATC 1 cut(s) 1342
BseAI TCCGGA 1 cut(s) 1942
BseBI CCWGG 4 cut(s) 447, 1224, 1294, 2000
BseCI ATCGAT 1 cut(s) 2053
BseDI CCNNGG 7 cut(s) 445, 759, 927, 1179, 1222, 1292, 1411
BseGI GGATG 7 cut(s) 198, 616, 955, 1346, 1888, 2494, 2604
BseJI GATNNNNATC 1 cut(s) 1342
BseLI CCNNNNNNNGG 5 cut(s) 665, 787, 1949, 2291, 2599
BseMI GCAATG 4 cut(s) 748, 844, 1617, 2553
BseMII CTCAG 1 cut(s) 1518
BseNI ACTGG 1 cut(s) 1048
BseRI GAGGAG 4 cut(s) 194, 2197, 2537, 2540
BseXI GCAGC 5 cut(s) 379, 808, 1653, 1656, 1999
BseYI CCCAGC 3 cut(s) 545, 800, 2362
BsgI GTGCAG 1 cut(s) 1837
Bsh1236I CGCG 2 cut(s) 2418, 2429
BshFI GGCC 4 cut(s) 320, 1221, 1976, 2284
BshNI GGYRCC 1 cut(s) 1594
BshVI ATCGAT 1 cut(s) 2053
BsiHKAI GWGCWC 2 cut(s) 2023, 2425
BsiSI CCGG 4 cut(s) 402, 1266, 1943, 2480
BslFI GGGAC 1 cut(s) 780
BslI CCNNNNNNNGG 5 cut(s) 665, 787, 1949, 2291, 2599
BsmAI GTCTC 6 cut(s) 455, 1180, 1927, 2138, 2199, 2659
BsmBI CGTCTC 1 cut(s) 2659
BsmFI GGGAC 1 cut(s) 780
BsmI GAATGC 2 cut(s) 194, 1275
BsnI GGCC 4 cut(s) 320, 1221, 1976, 2284
Bso31I GGTCTC 1 cut(s) 2138
Bsp119I TTCGAA 2 cut(s) 1306, 2496
Bsp1286I GDGCHC 2 cut(s) 2023, 2425
Bsp13I TCCGGA 1 cut(s) 1942
Bsp68I TCGCGA 1 cut(s) 2429
BspACI CCGC 4 cut(s) 692, 1915, 2332, 2418
BspANI GGCC 4 cut(s) 320, 1221, 1976, 2284
BspCNI CTCAG 1 cut(s) 1519
BspDI ATCGAT 1 cut(s) 2053
BspEI TCCGGA 1 cut(s) 1942
BspFNI CGCG 2 cut(s) 2418, 2429
BspLI GGNNCC 6 cut(s) 451, 657, 1596, 1738, 2206, 2529
BspOI GCTAGC 1 cut(s) 2342
BspPI GGATC 6 cut(s) 650, 663, 1345, 1351, 1788, 1868
BspQI GCTCTTC 2 cut(s) 1368, 1519
BspT104I TTCGAA 2 cut(s) 1306, 2496
BspT107I GGYRCC 1 cut(s) 1594
BspTI CTTAAG 1 cut(s) 713
BspTNI GGTCTC 1 cut(s) 2138
BsrDI GCAATG 4 cut(s) 748, 844, 1617, 2553
BsrI ACTGG 1 cut(s) 1048
BssECI CCNNGG 7 cut(s) 445, 759, 927, 1179, 1222, 1292, 1411
BssT1I CCWWGG 3 cut(s) 927, 1179, 1411
Bst2UI CCWGG 4 cut(s) 447, 1224, 1294, 2000
Bst4CI ACNGT 4 cut(s) 778, 858, 2374, 2634
Bst6I CTCTTC 5 cut(s) 561, 1368, 1506, 1519, 2389
BstAFI CTTAAG 1 cut(s) 713
BstAPI GCANNNNNTGC 1 cut(s) 1815
BstBAI YACGTR 2 cut(s) 256, 1166
BstBI TTCGAA 2 cut(s) 1306, 2496
BstC8I GCNNGC 7 cut(s) 54, 65, 79, 376, 2336, 2340, 2608
BstDEI CTNAG 4 cut(s) 1048, 1326, 1527, 1965
BstEII GGTNACC 1 cut(s) 1490
BstF5I GGATG 7 cut(s) 198, 616, 955, 1346, 1888, 2494, 2604
BstFNI CGCG 2 cut(s) 2418, 2429
BstH2I RGCGCY 1 cut(s) 1904
BstHHI GCGC 3 cut(s) 586, 1610, 1903
BstMAI GTCTC 6 cut(s) 455, 1180, 1927, 2138, 2199, 2659
BstMWI GCNNNNNNNGC 8 cut(s) 31, 109, 228, 398, 1128, 1575, 1815, 2018
BstNI CCWGG 4 cut(s) 447, 1224, 1294, 2000
BstNSI RCATGY 6 cut(s) 38, 81, 773, 1137, 1657, 2267
BstPI GGTNACC 1 cut(s) 1490
BstSCI CCNGG 5 cut(s) 445, 1222, 1264, 1292, 1998
BstSNI TACGTA 1 cut(s) 256
BstUI CGCG 2 cut(s) 2418, 2429
BstV1I GCAGC 5 cut(s) 379, 808, 1653, 1656, 1999
BstV2I GAAGAC 2 cut(s) 280, 715
BstX2I RGATCY 3 cut(s) 496, 655, 2407
BstYI RGATCY 3 cut(s) 496, 655, 2407
Bsu15I ATCGAT 1 cut(s) 2053
Bsu36I CCTNAGG 1 cut(s) 1326
BsuI GTATCC 1 cut(s) 1230
BsuRI GGCC 4 cut(s) 320, 1221, 1976, 2284
BsuTUI ATCGAT 1 cut(s) 2053
BtsCI GGATG 7 cut(s) 198, 616, 955, 1346, 1888, 2494, 2604
BtsIMutI CAGTG 2 cut(s) 996, 1041
BtuMI TCGCGA 1 cut(s) 2429
Cac8I GCNNGC 7 cut(s) 54, 65, 79, 376, 2336, 2340, 2608
CfoI GCGC 3 cut(s) 586, 1610, 1903
Cfr13I GGNCC 4 cut(s) 1220, 1736, 1974, 2283
ClaI ATCGAT 1 cut(s) 2053
CseI GACGC 3 cut(s) 1367, 2001, 2676
CsiI ACCWGGT 1 cut(s) 1998
Csp6I GTAC 6 cut(s) 71, 862, 1076, 1260, 1320, 1797
CviQI GTAC 6 cut(s) 71, 862, 1076, 1260, 1320, 1797
DdeI CTNAG 4 cut(s) 1048, 1326, 1527, 1965
DraI TTTAAA 1 cut(s) 1675
Eam1104I CTCTTC 5 cut(s) 561, 1368, 1506, 1519, 2389
EarI CTCTTC 5 cut(s) 561, 1368, 1506, 1519, 2389
Ecl136II GAGCTC 1 cut(s) 2021
Eco105I TACGTA 1 cut(s) 256
Eco130I CCWWGG 3 cut(s) 927, 1179, 1411
Eco24I GRGCYC 1 cut(s) 2023
Eco31I GGTCTC 1 cut(s) 2138
Eco32I GATATC 1 cut(s) 426
Eco47I GGWCC 1 cut(s) 1736
Eco53kI GAGCTC 1 cut(s) 2021
Eco81I CCTNAGG 1 cut(s) 1326
Eco91I GGTNACC 1 cut(s) 1490
EcoICRI GAGCTC 1 cut(s) 2021
EcoO109I RGGNCCY 1 cut(s) 2283
EcoO65I GGTNACC 1 cut(s) 1490
EcoRI GAATTC 3 cut(s) 572, 966, 1769
EcoRII CCWGG 4 cut(s) 445, 1222, 1292, 1998
EcoRV GATATC 1 cut(s) 426
EcoT14I CCWWGG 3 cut(s) 927, 1179, 1411
EcoT22I ATGCAT 3 cut(s) 264, 288, 1089
EcoT38I GRGCYC 1 cut(s) 2023
ErhI CCWWGG 3 cut(s) 927, 1179, 1411
Esp3I CGTCTC 1 cut(s) 2659
FaqI GGGAC 1 cut(s) 780
FbaI TGATCA 3 cut(s) 303, 1602, 2074
Fnu4HI GCNGC 6 cut(s) 393, 822, 1642, 1645, 1915, 1988
FokI GGATG 7 cut(s) 185, 603, 962, 1333, 1895, 2501, 2611
FriOI GRGCYC 1 cut(s) 2023
Fsp4HI GCNGC 6 cut(s) 393, 822, 1642, 1645, 1915, 1988
GlaI GCGC 3 cut(s) 585, 1609, 1902
GluI GCNGC 6 cut(s) 393, 822, 1642, 1645, 1915, 1988
GsaI CCCAGC 3 cut(s) 549, 804, 2366
HaeII RGCGCY 1 cut(s) 1904
HaeIII GGCC 4 cut(s) 320, 1221, 1976, 2284
HapII CCGG 4 cut(s) 402, 1266, 1943, 2480
HgaI GACGC 3 cut(s) 1367, 2001, 2676
HhaI GCGC 3 cut(s) 586, 1610, 1903
Hin6I GCGC 3 cut(s) 584, 1608, 1901
HinP1I GCGC 3 cut(s) 584, 1608, 1901
HincII GTYRAC 1 cut(s) 607
HindII GTYRAC 1 cut(s) 607
HinfI GANTC 5 cut(s) 405, 2179, 2230, 2431, 2448
HpaII CCGG 4 cut(s) 402, 1266, 1943, 2480
HphI GGTGA 5 cut(s) 710, 1238, 1778, 1942, 2174
Hpy166II GTNNAC 4 cut(s) 607, 1108, 1201, 1588
Hpy188I TCNGA 6 cut(s) 454, 763, 1257, 1528, 1747, 2277
Hpy8I GTNNAC 4 cut(s) 607, 1108, 1201, 1588
Hpy99I CGWCG 2 cut(s) 1355, 1383
HpyAV CCTTC 5 cut(s) 955, 1028, 1697, 1965, 2589
HpyCH4III ACNGT 4 cut(s) 778, 858, 2374, 2634
HpyCH4IV ACGT 3 cut(s) 255, 1078, 1165
HpyF10VI GCNNNNNNNGC 8 cut(s) 31, 109, 228, 398, 1128, 1575, 1815, 2018
HpyF3I CTNAG 4 cut(s) 1048, 1326, 1527, 1965
HpySE526I ACGT 3 cut(s) 255, 1078, 1165
HspAI GCGC 3 cut(s) 584, 1608, 1901
Kpn2I TCCGGA 1 cut(s) 1942
Ksp22I TGATCA 3 cut(s) 303, 1602, 2074
LguI GCTCTTC 2 cut(s) 1368, 1519
LmnI GCTCC 5 cut(s) 1662, 2026, 2210, 2377, 2527
Lsp1109I GCAGC 5 cut(s) 379, 808, 1653, 1656, 1999
LweI GCATC 7 cut(s) 102, 273, 1074, 1714, 1854, 2466, 2582
MabI ACCWGGT 1 cut(s) 1998
MaeII ACGT 3 cut(s) 255, 1078, 1165
MaeIII GTNAC 8 cut(s) 698, 728, 772, 1243, 1471, 1490, 1762, 2567
MfeI CAATTG 1 cut(s) 1810
MflI RGATCY 3 cut(s) 496, 655, 2407
MhlI GDGCHC 2 cut(s) 2023, 2425
MlyI GAGTC 1 cut(s) 2173
MmeI TCCRAC 4 cut(s) 438, 580, 633, 1984
Mph1103I ATGCAT 3 cut(s) 264, 288, 1089
MroI TCCGGA 1 cut(s) 1942
MslI CAYNNNNRTG 3 cut(s) 212, 644, 1208
MspA1I CMGCKG 1 cut(s) 1733
MspCI CTTAAG 1 cut(s) 713
MspI CCGG 4 cut(s) 402, 1266, 1943, 2480
MspR9I CCNGG 5 cut(s) 447, 1224, 1266, 1294, 2000
MunI CAATTG 1 cut(s) 1810
Mva1269I GAATGC 2 cut(s) 194, 1275
MvaI CCWGG 4 cut(s) 447, 1224, 1294, 2000
MvnI CGCG 2 cut(s) 2418, 2429
MwoI GCNNNNNNNGC 8 cut(s) 31, 109, 228, 398, 1128, 1575, 1815, 2018
NciI CCSGG 1 cut(s) 1266
NheI GCTAGC 1 cut(s) 2338
NlaIV GGNNCC 6 cut(s) 451, 657, 1596, 1738, 2206, 2529
NmuCI GTSAC 5 cut(s) 698, 772, 1243, 1762, 2567
NruI TCGCGA 1 cut(s) 2429
NsiI ATGCAT 3 cut(s) 264, 288, 1089
NspI RCATGY 6 cut(s) 38, 81, 773, 1137, 1657, 2267
NspV TTCGAA 2 cut(s) 1306, 2496
PaeI GCATGC 1 cut(s) 81
PciI ACATGT 2 cut(s) 769, 2263
PciSI GCTCTTC 2 cut(s) 1368, 1519
PctI GAATGC 2 cut(s) 194, 1275
PfeI GAWTC 4 cut(s) 405, 2230, 2431, 2448
PfoI TCCNGGA 1 cut(s) 1264
PkrI GCNGC 6 cut(s) 394, 823, 1643, 1646, 1916, 1989
PleI GAGTC 1 cut(s) 2173
PpsI GAGTC 1 cut(s) 2173
Ppu21I YACGTR 2 cut(s) 256, 1166
PscI ACATGT 2 cut(s) 769, 2263
PsiI TTATAA 2 cut(s) 129, 2535
Psp124BI GAGCTC 1 cut(s) 2023
Psp6I CCWGG 4 cut(s) 445, 1222, 1292, 1998
PspEI GGTNACC 1 cut(s) 1490
PspFI CCCAGC 3 cut(s) 545, 800, 2362
PspGI CCWGG 4 cut(s) 445, 1222, 1292, 1998
PspN4I GGNNCC 6 cut(s) 451, 657, 1596, 1738, 2206, 2529
PspPI GGNCC 4 cut(s) 1220, 1736, 1974, 2283
PsuI RGATCY 3 cut(s) 496, 655, 2407
PvuII CAGCTG 1 cut(s) 1733
RruI TCGCGA 1 cut(s) 2429
RsaI GTAC 6 cut(s) 72, 863, 1077, 1261, 1321, 1798
RsaNI GTAC 6 cut(s) 71, 862, 1076, 1260, 1320, 1797
RseI CAYNNNNRTG 3 cut(s) 212, 644, 1208
SacI GAGCTC 1 cut(s) 2023
SapI GCTCTTC 2 cut(s) 1368, 1519
SatI GCNGC 6 cut(s) 393, 822, 1642, 1645, 1915, 1988
Sau96I GGNCC 4 cut(s) 1220, 1736, 1974, 2283
ScaI AGTACT 3 cut(s) 1261, 1321, 1798
SchI GAGTC 1 cut(s) 2173
ScrFI CCNGG 5 cut(s) 447, 1224, 1266, 1294, 2000
SduI GDGCHC 2 cut(s) 2023, 2425
SexAI ACCWGGT 1 cut(s) 1998
SfaNI GCATC 7 cut(s) 102, 273, 1074, 1714, 1854, 2466, 2582
SfuI TTCGAA 2 cut(s) 1306, 2496
SinI GGWCC 1 cut(s) 1736
SmiMI CAYNNNNRTG 3 cut(s) 212, 644, 1208
SmlI CTYRAG 3 cut(s) 176, 713, 1549
SmoI CTYRAG 3 cut(s) 176, 713, 1549
SnaBI TACGTA 1 cut(s) 256
SpeI ACTAGT 1 cut(s) 1240
SphI GCATGC 1 cut(s) 81
SsiI CCGC 4 cut(s) 692, 1915, 2332, 2418
SspI AATATT 2 cut(s) 2122, 2163
SstI GAGCTC 1 cut(s) 2023
StyD4I CCNGG 5 cut(s) 445, 1222, 1264, 1292, 1998
StyI CCWWGG 3 cut(s) 927, 1179, 1411
TaaI ACNGT 4 cut(s) 778, 858, 2374, 2634
TaiI ACGT 3 cut(s) 258, 1081, 1168
TaqI TCGA 9 cut(s) 108, 576, 792, 942, 1306, 1690, 2053, 2451, 2496
TatI WGTACW 4 cut(s) 861, 1259, 1319, 1796
TauI GCSGC 1 cut(s) 1917
TfiI GAWTC 4 cut(s) 405, 2230, 2431, 2448
TscAI CASTG 2 cut(s) 996, 1048
TseFI GTSAC 5 cut(s) 698, 772, 1243, 1762, 2567
TseI GCWGC 5 cut(s) 392, 821, 1641, 1644, 1987
Tsp45I GTSAC 5 cut(s) 698, 772, 1243, 1762, 2567
TspGWI ACGGA 4 cut(s) 675, 770, 1339, 1793
TspRI CASTG 2 cut(s) 996, 1048
Vha464I CTTAAG 1 cut(s) 713
VpaK11BI GGWCC 1 cut(s) 1736
XapI RAATTY 9 cut(s) 466, 572, 752, 932, 966, 1386, 1397, 1769, 2300
XbaI TCTAGA 3 cut(s) 1462, 2015, 2404
XceI RCATGY 6 cut(s) 38, 81, 773, 1137, 1657, 2267
XcmI CCANNNNNNNNNTGG 1 cut(s) 2120
ZrmI AGTACT 3 cut(s) 1261, 1321, 1798
Zsp2I ATGCAT 3 cut(s) 264, 288, 1089
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.