Prupe.8G271500_v2.0.a1

Histidine kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
22498656 .. 22501799
3144 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G271500.1

Sequence Viewer

Length: 1512 bp
ATGGCTTTCCCGCAAAGTTTATTGACCGGCCTTGTTCATAAGAATTGCAAAGTGGCACTCATCCTCCTTATTGTAATGATTATTATTATGGTTGTCTTCATATTCAGCTATATTTTCCTAATGCTTAGTGCGGGGAGACGAGAGATGCATCTTTGTGTCACACTGATAAAGCAAATGGAGGCAACAAGCAGAGAGAGATTGATCGAGATATCTTACGATGAAGTTGCCCCAAGTTCTGAATTAGAAACAAATTTAAGACAAATGGATTCTTGTACAAGGGACCTGTTAGGCATATTGAACTCTATTCTTGATACAAATGTGGTCGATTTGTATCATCCTGTGGGTGTAAGGAAAAGCATAGATGTGGCGTTGGGTCCTTATGATGGCTCCGTTATAAAGTTTTCGAGAGTGAAAGGTGACATGGGAAGACTTAAGCAAATATTATGCAACTTAATAAGCAATGCTGTCAAATTTACTTCGGAAGGACATGTAGCAGTCCATGCTTGGGTGGAAAACCCCAGTTTTAAGAACTCCATAGTTGCTTCTGACAGGAACATTGGTGTTATGAGACAATTGTTGTGCTTTTTTAACAAGAACATGAAAGCAAAAGCTGACAGGGAAACAATGAATGTGGTCCAAAACGGTTCAAATTATTTGGAATTTGTATTTGAGGTGGATGATACAGGGAAGGGAATTCCTAAGGAAAAGCAAATATCAGTATTTGAAAACTATGTCCAAGTCAAAGAAACTGCTCTTGGAGAAGGAGGTACTAGCTTAGGACTTGGTATTGTTGTACGTTTGATGCATGGAGAAATACGAATTGTGGACAAGGAGATTGGGGAACGAGGGACATGCTTCAGGTTTAATGTTCTCCTAGCGGTATCTACTGCATCCACTCGCACTCCTAGTACTTCCGGGCTAAGCATTCACGCACCAAGCCCCAGATTGAACATTCGAATCCCAAGTCCTAGAATTGAGGGATCAGGATCCTTTGTCGTACTGTTGATTAAGAATAAGGAGCGCGGGAGAATTTCACAAAAGTTCTTTGAGAATCTTGAGATAAAAAAGACTAATCTTCGTGGCACATCAGTCTTTGCATTATTAGTAATTGATGCTACAGCTGGACCATTCAAAATGAGCCTTACTCGGAATAGGGGGGATATTTTTTATCAAGATGATGTTGTCAAACACAAGGCACGTCACGGTAGCCGTCTATATGAAGTGGTAAGGCTTCTTCCAGAGTTTAGGCTCGGTGCAACTGTGGAGCTTTGTGAAAATGGAAGACAAGCTCTTGATCTTGTTCGTAATGCTCTTGTTAATCAAGGAAAACATGGATGCAATTATATACAAATGGACTGTGAGATGCCAGAAATGGATGGGTTTGAAGCAACAATGCAAATAAGGAAAGAGGAAGAACCTTACAATGTTCACATTCCCATCATTCCATTAACTGGTCATGCACCAGGCGAGGAAAGAAAAAAGAGGATTGAGGCTCGCATGACGACCATTTAA

Protein Analysis

504

Amino Acids

56.39

Weight (kDa)

8.91

Isoelectric Point (pI)

36.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 395
AccB7I CCANNNNNTGG 1 cut(s) 1451
AccII CGCG 1 cut(s) 1023
AciI CCGC 4 cut(s) 11, 131, 878, 1023
AclWI GGATC 3 cut(s) 981, 988, 994
AcsI RAATTY 5 cut(s) 250, 470, 659, 693, 1029
AcuI CTGAAG 1 cut(s) 841
AfaI GTAC 5 cut(s) 274, 769, 795, 910, 999
AfiI CCNNNNNNNGG 3 cut(s) 383, 505, 1451
AflII CTTAAG 1 cut(s) 431
AflIII ACRYGT 1 cut(s) 487
AgsI TTSAA 6 cut(s) 298, 648, 725, 949, 1132, 1385
AjiI CACGTC 1 cut(s) 1199
AjnI CCWGG 1 cut(s) 1462
AjuI GAANNNNNNNTTGG 2 cut(s) 738, 770
AluBI AGCT 6 cut(s) 108, 611, 774, 1121, 1267, 1289
AluI AGCT 6 cut(s) 108, 611, 774, 1121, 1267, 1289
Alw26I GTCTC 2 cut(s) 130, 562
AlwI GGATC 3 cut(s) 981, 988, 994
AoxI GGCC 1 cut(s) 28
ApoI RAATTY 5 cut(s) 250, 470, 659, 693, 1029
ArsI GACNNNNNNTTYG 2 cut(s) 949, 981
AspLEI GCGC 1 cut(s) 1023
AspS9I GGNCC 4 cut(s) 280, 374, 634, 1124
AsuC2I CCSGG 1 cut(s) 916
AsuHPI GGTGA 1 cut(s) 428
AsuII TTCGAA 1 cut(s) 955
AvaII GGWCC 4 cut(s) 280, 374, 634, 1124
AxyI CCTNAGG 1 cut(s) 699
BaeI ACNNNNGTAYC 2 cut(s) 303, 336
BamHI GGATCC 1 cut(s) 986
BarI GAAGNNNNNNTAC 2 cut(s) 1218, 1250
BbsI GAAGAC 3 cut(s) 88, 433, 1288
BccI CCATC 3 cut(s) 377, 1370, 1445
BceAI ACGGC 1 cut(s) 1194
BcgI CGANNNNNNTGC 4 cut(s) 206, 240, 834, 868
BciT130I CCWGG 1 cut(s) 1464
BcnI CCSGG 1 cut(s) 916
BcoDI GTCTC 2 cut(s) 130, 562
BfaI CTAG 4 cut(s) 771, 875, 906, 969
BfmI CTRYAG 1 cut(s) 1116
BfrI CTTAAG 1 cut(s) 431
BlpI GCTNAGC 1 cut(s) 920
BmcAI AGTACT 1 cut(s) 910
Bme1390I CCNGG 2 cut(s) 916, 1464
Bme18I GGWCC 4 cut(s) 280, 374, 634, 1124
BmgBI CACGTC 1 cut(s) 1199
BmgT120I GGNCC 4 cut(s) 280, 374, 634, 1124
BmiI GGNNCC 4 cut(s) 281, 375, 388, 988
BmrFI CCNGG 2 cut(s) 916, 1464
BmrI ACTGGG 1 cut(s) 513
BmsI GCATC 7 cut(s) 135, 157, 792, 899, 1102, 1325, 1353
BmuI ACTGGG 1 cut(s) 513
BpiI GAAGAC 3 cut(s) 88, 433, 1288
BplI GAGNNNNNCTC 2 cut(s) 1129, 1161
Bpu10I CCTNAGC 1 cut(s) 775
Bpu1102I GCTNAGC 1 cut(s) 920
Bpu14I TTCGAA 1 cut(s) 955
BpuEI CTTGAG 1 cut(s) 1076
BpuMI CCSGG 1 cut(s) 916
BsaBI GATNNNNATC 2 cut(s) 330, 985
BsaXI ACNNNNNCTCC 4 cut(s) 48, 78, 886, 916
Bsc4I CCNNNNNNNGG 3 cut(s) 383, 505, 1451
Bse118I RCCGGY 1 cut(s) 26
Bse1I ACTGG 2 cut(s) 519, 1456
Bse21I CCTNAGG 1 cut(s) 699
Bse3DI GCAATG 1 cut(s) 466
Bse8I GATNNNNATC 2 cut(s) 330, 985
BseBI CCWGG 1 cut(s) 1464
BseGI GGATG 6 cut(s) 60, 334, 682, 890, 1340, 1381
BseJI GATNNNNATC 2 cut(s) 330, 985
BseLI CCNNNNNNNGG 3 cut(s) 383, 505, 1451
BseMI GCAATG 1 cut(s) 466
BseNI ACTGG 2 cut(s) 519, 1456
Bsh1236I CGCG 1 cut(s) 1023
BshFI GGCC 1 cut(s) 30
BsiSI CCGG 2 cut(s) 27, 915
BslFI GGGAC 2 cut(s) 293, 862
BslI CCNNNNNNNGG 3 cut(s) 383, 505, 1451
BsmAI GTCTC 2 cut(s) 130, 562
BsmBI CGTCTC 1 cut(s) 130
BsmFI GGGAC 2 cut(s) 293, 862
BsmI GAATGC 1 cut(s) 924
BsnI GGCC 1 cut(s) 30
Bsp119I TTCGAA 1 cut(s) 955
Bsp1407I TGTACA 1 cut(s) 272
Bsp143I GATC 4 cut(s) 201, 980, 986, 1294
Bsp1720I GCTNAGC 1 cut(s) 920
BspACI CCGC 4 cut(s) 11, 131, 878, 1023
BspANI GGCC 1 cut(s) 30
BspFNI CGCG 1 cut(s) 1023
BspLI GGNNCC 4 cut(s) 281, 375, 388, 988
BspPI GGATC 3 cut(s) 981, 988, 994
BspT104I TTCGAA 1 cut(s) 955
BspTI CTTAAG 1 cut(s) 431
BsrDI GCAATG 1 cut(s) 466
BsrFI RCCGGY 1 cut(s) 26
BsrGI TGTACA 1 cut(s) 272
BsrI ACTGG 2 cut(s) 519, 1456
BssAI RCCGGY 1 cut(s) 26
BssMI GATC 4 cut(s) 201, 980, 986, 1294
Bst2UI CCWGG 1 cut(s) 1464
Bst4CI ACNGT 5 cut(s) 644, 1002, 1205, 1261, 1358
BstAFI CTTAAG 1 cut(s) 431
BstAPI GCANNNNNTGC 1 cut(s) 500
BstAUI TGTACA 1 cut(s) 272
BstBI TTCGAA 1 cut(s) 955
BstC8I GCNNGC 1 cut(s) 1495
BstDEI CTNAG 4 cut(s) 125, 699, 775, 920
BstF5I GGATG 6 cut(s) 60, 334, 682, 890, 1340, 1381
BstFNI CGCG 1 cut(s) 1023
BstHHI GCGC 1 cut(s) 1023
BstKTI GATC 4 cut(s) 204, 983, 989, 1297
BstMAI GTCTC 2 cut(s) 130, 562
BstMBI GATC 4 cut(s) 201, 980, 986, 1294
BstMWI GCNNNNNNNGC 1 cut(s) 500
BstNI CCWGG 1 cut(s) 1464
BstNSI RCATGY 2 cut(s) 491, 855
BstSCI CCNGG 2 cut(s) 914, 1462
BstSFI CTRYAG 1 cut(s) 1116
BstUI CGCG 1 cut(s) 1023
BstV2I GAAGAC 3 cut(s) 88, 433, 1288
BstX2I RGATCY 1 cut(s) 986
BstYI RGATCY 1 cut(s) 986
Bsu36I CCTNAGG 1 cut(s) 699
BsuRI GGCC 1 cut(s) 30
BtrI CACGTC 1 cut(s) 1199
BtsCI GGATG 6 cut(s) 60, 334, 682, 890, 1340, 1381
BtsIMutI CAGTG 1 cut(s) 161
Cac8I GCNNGC 1 cut(s) 1495
CfoI GCGC 1 cut(s) 1023
Cfr10I RCCGGY 1 cut(s) 26
Cfr13I GGNCC 4 cut(s) 280, 374, 634, 1124
Csp6I GTAC 5 cut(s) 273, 768, 794, 909, 998
CspCI CAANNNNNGTGG 2 cut(s) 612, 647
CviAII CATG 9 cut(s) 421, 488, 500, 598, 806, 852, 1331, 1457, 1498
CviQI GTAC 5 cut(s) 273, 768, 794, 909, 998
DdeI CTNAG 4 cut(s) 125, 699, 775, 920
DpnI GATC 4 cut(s) 203, 982, 988, 1296
DpnII GATC 4 cut(s) 201, 980, 986, 1294
Eco32I GATATC 1 cut(s) 210
Eco47I GGWCC 4 cut(s) 280, 374, 634, 1124
Eco57I CTGAAG 1 cut(s) 841
Eco81I CCTNAGG 1 cut(s) 699
EcoO109I RGGNCCY 2 cut(s) 280, 374
EcoRI GAATTC 1 cut(s) 693
EcoRII CCWGG 1 cut(s) 1462
EcoRV GATATC 1 cut(s) 210
EcoT22I ATGCAT 2 cut(s) 150, 807
Esp3I CGTCTC 1 cut(s) 130
FaeI CATG 9 cut(s) 424, 491, 503, 601, 809, 855, 1334, 1460, 1501
FaqI GGGAC 2 cut(s) 293, 862
FatI CATG 9 cut(s) 420, 487, 499, 597, 805, 851, 1330, 1456, 1497
FauI CCCGC 3 cut(s) 18, 124, 1016
FokI GGATG 6 cut(s) 47, 321, 689, 877, 1347, 1388
FspBI CTAG 4 cut(s) 771, 875, 906, 969
GlaI GCGC 1 cut(s) 1022
HaeIII GGCC 1 cut(s) 30
HapII CCGG 2 cut(s) 27, 915
HhaI GCGC 1 cut(s) 1023
Hin1II CATG 9 cut(s) 424, 491, 503, 601, 809, 855, 1334, 1460, 1501
Hin6I GCGC 1 cut(s) 1021
HinP1I GCGC 1 cut(s) 1021
HinfI GANTC 3 cut(s) 266, 957, 1051
HpaII CCGG 2 cut(s) 27, 915
HphI GGTGA 1 cut(s) 428
Hpy166II GTNNAC 2 cut(s) 826, 1429
Hpy188I TCNGA 4 cut(s) 238, 481, 547, 1149
Hpy188III TCNNGA 8 cut(s) 205, 308, 405, 984, 1055, 1172, 1238, 1292
Hpy8I GTNNAC 2 cut(s) 826, 1429
HpyAV CCTTC 3 cut(s) 476, 682, 755
HpyCH4III ACNGT 5 cut(s) 644, 1002, 1205, 1261, 1358
HpyCH4IV ACGT 2 cut(s) 796, 1198
HpyF10VI GCNNNNNNNGC 1 cut(s) 500
HpyF3I CTNAG 4 cut(s) 125, 699, 775, 920
HpySE526I ACGT 2 cut(s) 796, 1198
Hsp92II CATG 9 cut(s) 424, 491, 503, 601, 809, 855, 1334, 1460, 1501
HspAI GCGC 1 cut(s) 1021
Kzo9I GATC 4 cut(s) 201, 980, 986, 1294
LmnI GCTCC 3 cut(s) 392, 1018, 1264
LweI GCATC 7 cut(s) 135, 157, 792, 899, 1102, 1325, 1353
MaeI CTAG 4 cut(s) 771, 875, 906, 969
MaeII ACGT 2 cut(s) 796, 1198
MaeIII GTNAC 3 cut(s) 157, 416, 1199
MalI GATC 4 cut(s) 203, 982, 988, 1296
MboI GATC 4 cut(s) 201, 980, 986, 1294
MboII GAAGA 6 cut(s) 88, 438, 1067, 1226, 1293, 1424
MfeI CAATTG 1 cut(s) 572
MflI RGATCY 1 cut(s) 986
Mph1103I ATGCAT 2 cut(s) 150, 807
MslI CAYNNNNRTG 2 cut(s) 153, 362
MspA1I CMGCKG 1 cut(s) 1121
MspCI CTTAAG 1 cut(s) 431
MspI CCGG 2 cut(s) 27, 915
MspR9I CCNGG 2 cut(s) 916, 1464
MunI CAATTG 1 cut(s) 572
Mva1269I GAATGC 1 cut(s) 924
MvaI CCWGG 1 cut(s) 1464
MvnI CGCG 1 cut(s) 1023
MwoI GCNNNNNNNGC 1 cut(s) 500
NciI CCSGG 1 cut(s) 916
NdeII GATC 4 cut(s) 201, 980, 986, 1294
NlaIII CATG 9 cut(s) 424, 491, 503, 601, 809, 855, 1334, 1460, 1501
NlaIV GGNNCC 4 cut(s) 281, 375, 388, 988
NmuCI GTSAC 3 cut(s) 157, 416, 1199
NsiI ATGCAT 2 cut(s) 150, 807
NspI RCATGY 2 cut(s) 491, 855
NspV TTCGAA 1 cut(s) 955
PciI ACATGT 1 cut(s) 487
PctI GAATGC 1 cut(s) 924
PfeI GAWTC 3 cut(s) 266, 957, 1051
PflMI CCANNNNNTGG 1 cut(s) 1451
PpuMI RGGWCCY 2 cut(s) 280, 374
PscI ACATGT 1 cut(s) 487
PsiI TTATAA 1 cut(s) 395
Psp5II RGGWCCY 2 cut(s) 280, 374
Psp6I CCWGG 1 cut(s) 1462
PspGI CCWGG 1 cut(s) 1462
PspN4I GGNNCC 4 cut(s) 281, 375, 388, 988
PspPI GGNCC 4 cut(s) 280, 374, 634, 1124
PspPPI RGGWCCY 2 cut(s) 280, 374
PsuI RGATCY 1 cut(s) 986
PvuII CAGCTG 1 cut(s) 1121
RsaI GTAC 5 cut(s) 274, 769, 795, 910, 999
RsaNI GTAC 5 cut(s) 273, 768, 794, 909, 998
RseI CAYNNNNRTG 2 cut(s) 153, 362
Sau3AI GATC 4 cut(s) 201, 980, 986, 1294
Sau96I GGNCC 4 cut(s) 280, 374, 634, 1124
ScaI AGTACT 1 cut(s) 910
ScrFI CCNGG 2 cut(s) 916, 1464
SfaNI GCATC 7 cut(s) 135, 157, 792, 899, 1102, 1325, 1353
SfcI CTRYAG 1 cut(s) 1116
SfuI TTCGAA 1 cut(s) 955
SinI GGWCC 4 cut(s) 280, 374, 634, 1124
SmiMI CAYNNNNRTG 2 cut(s) 153, 362
SmlI CTYRAG 2 cut(s) 431, 1055
SmoI CTYRAG 2 cut(s) 431, 1055
SsiI CCGC 4 cut(s) 11, 131, 878, 1023
SspI AATATT 1 cut(s) 441
SspMI CTAG 4 cut(s) 771, 875, 906, 969
StyD4I CCNGG 2 cut(s) 914, 1462
TaaI ACNGT 5 cut(s) 644, 1002, 1205, 1261, 1358
TaiI ACGT 2 cut(s) 799, 1201
TaqI TCGA 4 cut(s) 204, 324, 404, 955
TatI WGTACW 2 cut(s) 272, 908
TfiI GAWTC 3 cut(s) 266, 957, 1051
TscAI CASTG 1 cut(s) 168
TseFI GTSAC 3 cut(s) 157, 416, 1199
Tsp45I GTSAC 3 cut(s) 157, 416, 1199
TspDTI ATGAA 6 cut(s) 26, 88, 234, 614, 641, 1233
TspGWI ACGGA 1 cut(s) 379
TspRI CASTG 1 cut(s) 168
Van91I CCANNNNNTGG 1 cut(s) 1451
Vha464I CTTAAG 1 cut(s) 431
VpaK11BI GGWCC 4 cut(s) 280, 374, 634, 1124
XapI RAATTY 5 cut(s) 250, 470, 659, 693, 1029
XceI RCATGY 2 cut(s) 491, 855
XspI CTAG 4 cut(s) 771, 875, 906, 969
ZrmI AGTACT 1 cut(s) 910
Zsp2I ATGCAT 2 cut(s) 150, 807
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.