Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002268.1

Orthogroup ID

OG0000934

Physical Location & Seq

Genomic Coordinates Forward (+)

53399 .. 59108

Gene Structure 5710 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002268.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2610 bp

atgagtgtcttcatcttcagttactctttcataatgctaactgttgcgaaacgggaaatgcatcgttatgccacactcatagaacaaagggagaaaactgagcaagctgagagaaagagcatgaggaaaagtgatgcatttgctaaagcaagccatgacattcgggctgcgctagctggaattattagttggatcaacttctgtaaagatgatattcatgatgcgcttgatcttcatgccacaaatgctggaactacccggcattctgaaatagagacaatcttaacaaaaatagattccaacttaaaaagactggatgttcatgcagaagatcttttaggtatattgaactctgttcttgacaaaagcaaaattgaagcaggtaagatggtacttgaaaatgaagaatttgatgtggctcagcttgttgaagaggtagtagatttgtttcttccaactgcatcaatgaagggattagatgtggtgttggatccttgtgatggatctgttataaagtttgcacgtgtgaaaggtgacaggggaaggcttaagcagatactaaacaacttactaagcaatgctgttaaatttacgtcagaagggcaaatcacaatccgcacctgggtccgaaaaccaagttttaagaagtcaataactgcttctcgtgagcggactaatggtttcttgaaacagttcttatgcttgtttaattacaagaacatgaacaatgatgacaaggaagtagtggatggttctcaacgtgatcccaatgctttggaatttgtttttgaggtggatgatactggtaggggaattctcaaggagaggcaaaaatcggtgttcgaggactatgtccaagtcaaagaaaaagcacttggagaaggtggtaccggcttaggactgggaattgttcaatctctggtgcgtttgatgcatggagaaataggaattgtggacaaggagattggggaaagagggacatgcttcaggttcaatgtactgctaagcactattaatacctgtgaggatagcataaaagtagaaccagacattgaaatgggaattagtgacttaaaccctagtcccgggccgactgtcaatcaaacaccaattgcaagccccaagttgaacattcgcagtaccaccgcgagtcctaaggtcgagggatcctatgttgtaatgctgattaaaaatgcagagcgcaggagagttatacagaagtttatggagagacttgggataaaagtatcagtagcagaacgatgggaacaacttgctcgtactctccagaacataaaaaacaagaagatttaccattctcaacataattccatatcaggaatacccgatttgggtctgcaggattgcttgatcaaatccgcctcatgcaactccaacttcagctttaatagagcaaaggaagcgtctttgatgagttccatggatggatcaacagataacaacattctttctctctttcataagaagagtagtagtagtaatcttcgtggagcatatgatcgcttcgtaatgctacttattgatactacaggtggaccactcccagaactatgcaagattgtgaatgatttcaaaagaggcctccaaaatggttggtactgcaaggttgtttggttatcaagtccatttactcatagcgatctaagcttcaacagagatatgttggatggcgatgatgttatcaaacacaagcctctacatggtacttgtctatatgaagttgtaagacttcttccagagtgcgggggcgcattaccaaaaagatcatcaggtcaggttgcatcaaaactagtttccacagctcttgtttcatcaagaaatcagtacattcataccgatgatgacaactcctctgaccaaatagtacaagagagtaattcaccgactcttcaacatcatcaacctcctaagaatattggctccaaagcagcaagtcaatcagccccagcagaccatggcaacaaacccttgactgggaagaaaatcttggttgcagaggacacagcatcgttacgcatggtggctatgcaggctttgtcacgattgggtgcgactgtgaagctttatgccagaaatggatgggttcgaagcgaccagggaaatcaggaaagaggagaaatcttacaatgttcgcattccgatcatcgcattaacagctcatgcaaaaggaggcgaggaaacaagaaggatgatggaggctgggcgaagagtccatcttcttatcgaacgccaccaacgactatcgctacaattagagcgatagccgtacctccggaaagaaaggctccgcttgcaatcacactttgtacgatggaggttcaaatccaagaatcagttgttggtaggcctcaggttaaggtgcaatttcagcttggttcagaaacatattctgtcagcggaaacaagggcatactttctgagcaactggtttcagttaaagaggagagcatggccatattgaaggacttcatcaccaaacacaatgttcctaatgatgtccctgatgaacctgttgaagactcttctgaagatgatggtgaaattcttgagaagcctcaagtcaagtcaaagaagacaaagcttacttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009553 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009888 GO:0009987 GO:0010033 GO:0010087 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0018106 GO:0018193 GO:0018202 GO:0019538 GO:0023052 GO:0030054 GO:0032501 GO:0032502 GO:0032870 GO:0036211 GO:0040007 GO:0042221 GO:0042802 GO:0042803 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046983 GO:0048229 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0071704 GO:0071944 GO:0080117 GO:0080190 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HATPase_c HisKA Response_reg

Protein Analysis

869

Amino Acids

96.5

Weight (kDa)

8.6

Isoelectric Point (pI)

44.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000934)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02090
fragaria_vesca	FvH4_2g00520 FvH4_5g39340 FvH4_5g39350
malus_domestica	MD03G1295900.v1.1 MD03G1296400.v1.1 MD11G1315000.v1.1 MD11G1315800.v1.1
prunus_persica	Prupe.8G031600_v2.0.a1 Prupe.8G270900_v2.0.a1 Prupe.8G271500_v2.0.a1
pyrus_communis	pycom03g23400 pycom03g23460 pycom11g27520 pycom11g27570
rosa_chinensis	RchiOBHm_Chr6g0250521 RchiOBHm_Chr6g0250591 RchiOBHm_Chr6g0250601 RchiOBHm_Chr6g0250841 RchiOBHm_Chr7g0241621 RchiOBHm_Chr7g0241631
rosa_laevigata	RLG00000000559 RLG00000000560 RLG00000015494 RLG00000015498 RLG00000015520 RLG00000015530 RLG00000015533 RLG00000015535
rosa_multiflora	Rmu_co8325851.1_g000001 Rmu_co8374241.1_g000001 Rmu_co8391029.1_g000001 Rmu_sc0002268.1_g000012 Rmu_sc0002268.1_g000013 Rmu_sc0007248.1_g000005 Rmu_sc0033402.1_g000001
rosa_roxburghii	Rroxscaffold_3G00218870 Rroxscaffold_7G00217140 Rroxscaffold_7G00217190
rosa_rugosa	Rorug07G0345700 Rorug07G0345800
rosa_samantha	Rh6AG006300 Rh6AG007200 Rh6AG007300 Rh6BG003700 Rh6BG004300 Rh6CG004500 Rh6DG004500 Rh6DG005300 Rh7AG500200 Rh7AG500300 Rh7BG471300 Rh7BG471400 Rh7CG516700 Rh7CG516800 Rh7DG485200 Rh7DG485300
rosa_wichuraiana	Rw0G020910 Rw6G000690 Rw6G000760 Rw6G000800 Rw6G000850 Rw7G042250 Rw7G042260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	512
Acc36I	ACCTGC	1 cut(s)	371
Acc65I	GGTACC	1 cut(s)	887
AccB1I	GGYRCC	1 cut(s)	887
AccBSI	CCGCTC	1 cut(s)	670
AccII	CGCG	1 cut(s)	1148
AccIII	TCCGGA	1 cut(s)	2293
AciI	CCGC	7 cut(s)	616, 670, 1146, 1380, 1764, 2309, 2418
AclWI	GGATC	8 cut(s)	200, 485, 498, 511, 758, 1161, 1174, 1456
AcoI	YGGCCR	1 cut(s)	2472
AcsI	RAATTY	5 cut(s)	407, 587, 779, 813, 2562
AcuI	CTGAAG	3 cut(s)	970, 1384, 2568
AcvI	CACGTG	1 cut(s)	524
AfiI	CCNNNNNNNGG	8 cut(s)	500, 622, 1085, 1352, 1721, 1763, 1994, 1995
AflII	CTTAAG	1 cut(s)	548
AflIII	ACRYGT	1 cut(s)	523
AhlI	ACTAGT	1 cut(s)	1810
AjnI	CCWGG	2 cut(s)	620, 2115
AjuI	GAANNNNNNNTTGG	8 cut(s)	172, 204, 858, 890, 1991, 2023, 2343, 2375
Alw26I	GTCTC	2 cut(s)	269, 1225
AlwI	GGATC	8 cut(s)	200, 485, 498, 511, 758, 1161, 1174, 1456
Ama87I	CYCGRG	1 cut(s)	1085
Aor13HI	TCCGGA	1 cut(s)	2293
AoxI	GGCC	4 cut(s)	1088, 1600, 2366, 2472
ApeKI	GCWGC	2 cut(s)	167, 1949
ApoI	RAATTY	5 cut(s)	407, 587, 779, 813, 2562
ArsI	GACNNNNNNTTYG	2 cut(s)	1409, 1441
AseI	ATTAAT	1 cut(s)	1014
Asp700I	GAANNNNTTC	3 cut(s)	692, 1589, 2486
Asp718I	GGTACC	1 cut(s)	887
AspLEI	GCGC	4 cut(s)	172, 226, 1203, 1772
AspS9I	GGNCC	3 cut(s)	625, 1088, 1556
AsuC2I	CCSGG	3 cut(s)	259, 1086, 1087
AsuHPI	GGTGA	4 cut(s)	545, 1893, 2485, 2570
AsuII	TTCGAA	1 cut(s)	2107
AsuNHI	GCTAGC	1 cut(s)	172
AvaI	CYCGRG	1 cut(s)	1085
AvaII	GGWCC	2 cut(s)	625, 1556
AxyI	CCTNAGG	2 cut(s)	1155, 2370
BalI	TGGCCA	1 cut(s)	2474
BamHI	GGATCC	2 cut(s)	490, 1166
BanI	GGYRCC	1 cut(s)	887
BarI	GAAGNNNNNNTAC	2 cut(s)	1737, 1769
BauI	CACGAG	1 cut(s)	663
BbrPI	CACGTG	1 cut(s)	524
BbsI	GAAGAC	2 cut(s)	2544, 2600
BbvI	GCAGC	2 cut(s)	154, 1961
BceAI	ACGGC	1 cut(s)	2270
BciT130I	CCWGG	2 cut(s)	622, 2117
BclI	TGATCA	1 cut(s)	1371
BcnI	CCSGG	3 cut(s)	259, 1086, 1087
BcoDI	GTCTC	2 cut(s)	269, 1225
BcuI	ACTAGT	1 cut(s)	1810
BfaI	CTAG	3 cut(s)	173, 1080, 1811
BfmI	CTRYAG	2 cut(s)	1358, 1548
BfrI	CTTAAG	1 cut(s)	548
BfuAI	ACCTGC	1 cut(s)	371
BglII	AGATCT	1 cut(s)	331
BisI	GCNGC	2 cut(s)	168, 1950
BlpI	GCTNAGC	2 cut(s)	420, 1004
BlsI	GCNGC	2 cut(s)	169, 1951
Bme1390I	CCNGG	5 cut(s)	259, 622, 1086, 1087, 2117
Bme18I	GGWCC	2 cut(s)	625, 1556
BmeT110I	CYCGRG	1 cut(s)	1085
BmgT120I	GGNCC	3 cut(s)	625, 1088, 1556
BmiI	GGNNCC	6 cut(s)	492, 626, 889, 1168, 1942, 2307
BmrFI	CCNGG	5 cut(s)	259, 622, 1086, 1087, 2117
BmrI	ACTGGG	2 cut(s)	911, 2004
BmsI	GCATC	7 cut(s)	70, 124, 211, 470, 921, 1811, 2036
BmtI	GCTAGC	1 cut(s)	176
BmuI	ACTGGG	2 cut(s)	911, 2004
BpiI	GAAGAC	2 cut(s)	2544, 2600
BpmI	CTGGAG	1 cut(s)	1271
Bpu10I	CCTNAGC	1 cut(s)	895
Bpu1102I	GCTNAGC	2 cut(s)	420, 1004
Bpu14I	TTCGAA	1 cut(s)	2107
BpuEI	CTTGAG	3 cut(s)	803, 2562, 2588
BpuMI	CCSGG	3 cut(s)	259, 1086, 1087
BsaAI	YACGTR	1 cut(s)	524
BsaJI	CCNNGG	5 cut(s)	621, 1085, 1440, 1975, 2116
BsaWI	WCCGGW	1 cut(s)	2293
Bsc4I	CCNNNNNNNGG	8 cut(s)	500, 622, 1085, 1352, 1721, 1763, 1994, 1995
Bse118I	RCCGGY	1 cut(s)	890
Bse1I	ACTGG	5 cut(s)	318, 808, 906, 1999, 2451
Bse21I	CCTNAGG	2 cut(s)	1155, 2370
Bse3DI	GCAATG	1 cut(s)	583
BseAI	TCCGGA	1 cut(s)	2293
BseBI	CCWGG	2 cut(s)	622, 2117
BseDI	CCNNGG	5 cut(s)	621, 1085, 1440, 1975, 2116
BseGI	GGATG	7 cut(s)	322, 754, 802, 1450, 1693, 2105, 2215
BseLI	CCNNNNNNNGG	8 cut(s)	500, 622, 1085, 1352, 1721, 1763, 1994, 1995
BseMI	GCAATG	1 cut(s)	583
BseMII	CTCAG	5 cut(s)	90, 99, 434, 2384, 2430
BseNI	ACTGG	5 cut(s)	318, 808, 906, 1999, 2451
BseRI	GAGGAG	3 cut(s)	1861, 2148, 2477
BseXI	GCAGC	2 cut(s)	154, 1961
BseYI	CCCAGC	2 cut(s)	1966, 2220
Bsh1236I	CGCG	1 cut(s)	1148
BshFI	GGCC	4 cut(s)	1090, 1602, 2368, 2474
BshNI	GGYRCC	1 cut(s)	887
BsiHKCI	CYCGRG	1 cut(s)	1085
BsiSI	CCGG	4 cut(s)	259, 891, 1086, 2294
BslFI	GGGAC	3 cut(s)	991, 1068, 2504
BslI	CCNNNNNNNGG	8 cut(s)	500, 622, 1085, 1352, 1721, 1763, 1994, 1995
BsmAI	GTCTC	2 cut(s)	269, 1225
BsmFI	GGGAC	3 cut(s)	991, 1068, 2504
BsmI	GAATGC	2 cut(s)	262, 2155
BsnI	GGCC	4 cut(s)	1090, 1602, 2368, 2474
BsoBI	CYCGRG	1 cut(s)	1085
Bsp119I	TTCGAA	1 cut(s)	2107
Bsp13I	TCCGGA	1 cut(s)	2293
Bsp1720I	GCTNAGC	2 cut(s)	420, 1004
Bsp19I	CCATGG	2 cut(s)	1440, 1975
BspACI	CCGC	7 cut(s)	616, 670, 1146, 1380, 1764, 2309, 2418
BspANI	GGCC	4 cut(s)	1090, 1602, 2368, 2474
BspCNI	CTCAG	5 cut(s)	91, 100, 433, 2383, 2431
BspEI	TCCGGA	1 cut(s)	2293
BspFNI	CGCG	1 cut(s)	1148
BspHI	TCATGA	1 cut(s)	217
BspLI	GGNNCC	6 cut(s)	492, 626, 889, 1168, 1942, 2307
BspMAI	CTGCAG	1 cut(s)	1362
BspMI	ACCTGC	1 cut(s)	371
BspOI	GCTAGC	1 cut(s)	176
BspPI	GGATC	8 cut(s)	200, 485, 498, 511, 758, 1161, 1174, 1456
BspT104I	TTCGAA	1 cut(s)	2107
BspT107I	GGYRCC	1 cut(s)	887
BspTI	CTTAAG	1 cut(s)	548
BsrBI	CCGCTC	1 cut(s)	670
BsrDI	GCAATG	1 cut(s)	583
BsrFI	RCCGGY	1 cut(s)	890
BsrI	ACTGG	5 cut(s)	318, 808, 906, 1999, 2451
BssAI	RCCGGY	1 cut(s)	890
BssECI	CCNNGG	5 cut(s)	621, 1085, 1440, 1975, 2116
BssSI	CACGAG	1 cut(s)	663
BssT1I	CCWWGG	2 cut(s)	1440, 1975
Bst2BI	CACGAG	1 cut(s)	663
Bst2UI	CCWGG	2 cut(s)	622, 2117
Bst4CI	ACNGT	4 cut(s)	43, 693, 1096, 2077
Bst6I	CTCTTC	5 cut(s)	426, 1481, 1914, 2222, 2548
BstAFI	CTTAAG	1 cut(s)	548
BstBAI	YACGTR	1 cut(s)	524
BstBI	TTCGAA	1 cut(s)	2107
BstC8I	GCNNGC	6 cut(s)	105, 151, 174, 1117, 2052, 2313
BstDSI	CCRYGG	2 cut(s)	1440, 1975
BstF5I	GGATG	7 cut(s)	322, 754, 802, 1450, 1693, 2105, 2215
BstFNI	CGCG	1 cut(s)	1148
BstHHI	GCGC	4 cut(s)	172, 226, 1203, 1772
BstMAI	GTCTC	2 cut(s)	269, 1225
BstMWI	GCNNNNNNNGC	9 cut(s)	173, 245, 931, 1421, 1665, 2051, 2175, 2312, 2389
BstNI	CCWGG	2 cut(s)	622, 2117
BstNSI	RCATGY	1 cut(s)	984
BstSCI	CCNGG	5 cut(s)	257, 620, 1084, 1085, 2115
BstSFI	CTRYAG	2 cut(s)	1358, 1548
BstUI	CGCG	1 cut(s)	1148
BstV1I	GCAGC	2 cut(s)	154, 1961
BstV2I	GAAGAC	2 cut(s)	2544, 2600
BstX2I	RGATCY	4 cut(s)	331, 490, 503, 1166
BstXI	CCANNNNNNTGG	1 cut(s)	775
BstYI	RGATCY	4 cut(s)	331, 490, 503, 1166
Bsu36I	CCTNAGG	2 cut(s)	1155, 2370
BsuRI	GGCC	4 cut(s)	1090, 1602, 2368, 2474
BtgI	CCRYGG	2 cut(s)	1440, 1975
BtgZI	GCGATG	2 cut(s)	1707, 2150
BtsCI	GGATG	7 cut(s)	322, 754, 802, 1450, 1693, 2105, 2215
BveI	ACCTGC	1 cut(s)	371
Cac8I	GCNNGC	6 cut(s)	105, 151, 174, 1117, 2052, 2313
CciI	TCATGA	1 cut(s)	217
CfoI	GCGC	4 cut(s)	172, 226, 1203, 1772
Cfr10I	RCCGGY	1 cut(s)	890
Cfr13I	GGNCC	3 cut(s)	625, 1088, 1556
Cfr9I	CCCGGG	1 cut(s)	1085
CseI	GACGC	1 cut(s)	1413
CspCI	CAANNNNNGTGG	2 cut(s)	1807, 1842
EaeI	YGGCCR	1 cut(s)	2472
Eam1104I	CTCTTC	5 cut(s)	426, 1481, 1914, 2222, 2548
EarI	CTCTTC	5 cut(s)	426, 1481, 1914, 2222, 2548
EciI	GGCGGA	1 cut(s)	1369
Eco130I	CCWWGG	2 cut(s)	1440, 1975
Eco147I	AGGCCT	2 cut(s)	1602, 2368
Eco47I	GGWCC	2 cut(s)	625, 1556
Eco57I	CTGAAG	3 cut(s)	970, 1384, 2568
Eco72I	CACGTG	1 cut(s)	524
Eco81I	CCTNAGG	2 cut(s)	1155, 2370
Eco88I	CYCGRG	1 cut(s)	1085
EcoRI	GAATTC	1 cut(s)	813
EcoRII	CCWGG	2 cut(s)	620, 2115
EcoT14I	CCWWGG	2 cut(s)	1440, 1975
EcoT22I	ATGCAT	3 cut(s)	63, 139, 936
ErhI	CCWWGG	2 cut(s)	1440, 1975
FalI	AAGNNNNNCTT	2 cut(s)	1991, 2023
FaqI	GGGAC	3 cut(s)	991, 1068, 2504
FauI	CCCGC	1 cut(s)	1757
FauNDI	CATATG	1 cut(s)	1516
FbaI	TGATCA	1 cut(s)	1371
Fnu4HI	GCNGC	2 cut(s)	168, 1950
FokI	GGATG	7 cut(s)	329, 761, 809, 1457, 1700, 2112, 2222
Fsp4HI	GCNGC	2 cut(s)	168, 1950
FspBI	CTAG	3 cut(s)	173, 1080, 1811
GlaI	GCGC	4 cut(s)	171, 225, 1202, 1771
GluI	GCNGC	2 cut(s)	168, 1950
GsaI	CCCAGC	2 cut(s)	1970, 2224
GsuI	CTGGAG	1 cut(s)	1271
HaeIII	GGCC	4 cut(s)	1090, 1602, 2368, 2474
HapII	CCGG	4 cut(s)	259, 891, 1086, 2294
HgaI	GACGC	1 cut(s)	1413
HhaI	GCGC	4 cut(s)	172, 226, 1203, 1772
Hin6I	GCGC	4 cut(s)	170, 224, 1201, 1770
HinP1I	GCGC	4 cut(s)	170, 224, 1201, 1770
HindIII	AAGCTT	3 cut(s)	1666, 2081, 2600
HinfI	GANTC	6 cut(s)	296, 1150, 1906, 2230, 2351, 2540
HpaII	CCGG	4 cut(s)	259, 891, 1086, 2294
HphI	GGTGA	4 cut(s)	545, 1893, 2485, 2570
Hpy166II	GTNNAC	2 cut(s)	955, 1556
Hpy188I	TCNGA	8 cut(s)	268, 598, 629, 1876, 2161, 2401, 2440, 2548
Hpy8I	GTNNAC	2 cut(s)	955, 1556
HpyAV	CCTTC	6 cut(s)	463, 537, 593, 875, 2200, 2476
HpyCH4III	ACNGT	4 cut(s)	43, 693, 1096, 2077
HpyCH4IV	ACGT	3 cut(s)	523, 593, 760
HpyF10VI	GCNNNNNNNGC	9 cut(s)	173, 245, 931, 1421, 1665, 2051, 2175, 2312, 2389
HpySE526I	ACGT	3 cut(s)	523, 593, 760
HspAI	GCGC	4 cut(s)	170, 224, 1201, 1770
Kpn2I	TCCGGA	1 cut(s)	2293
KpnI	GGTACC	1 cut(s)	891
Ksp22I	TGATCA	1 cut(s)	1371
LmnI	GCTCC	3 cut(s)	1511, 1946, 2311
Lsp1109I	GCAGC	2 cut(s)	154, 1961
LweI	GCATC	7 cut(s)	70, 124, 211, 470, 921, 1811, 2036
MaeI	CTAG	3 cut(s)	173, 1080, 1811
MaeII	ACGT	3 cut(s)	523, 593, 760
MaeIII	GTNAC	5 cut(s)	20, 533, 1067, 2031, 2058
MbiI	CCGCTC	1 cut(s)	670
MfeI	CAATTG	1 cut(s)	1110
MflI	RGATCY	4 cut(s)	331, 490, 503, 1166
MlsI	TGGCCA	1 cut(s)	2474
MluNI	TGGCCA	1 cut(s)	2474
MlyI	GAGTC	4 cut(s)	1159, 1900, 2239, 2534
MmeI	TCCRAC	6 cut(s)	170, 324, 468, 479, 1419, 1665
Mox20I	TGGCCA	1 cut(s)	2474
Mph1103I	ATGCAT	3 cut(s)	63, 139, 936
MroI	TCCGGA	1 cut(s)	2293
MroXI	GAANNNNTTC	3 cut(s)	692, 1589, 2486
MscI	TGGCCA	1 cut(s)	2474
MslI	CAYNNNNRTG	3 cut(s)	66, 1055, 1857
Msp20I	TGGCCA	1 cut(s)	2474
MspA1I	CMGCKG	1 cut(s)	2418
MspCI	CTTAAG	1 cut(s)	548
MspI	CCGG	4 cut(s)	259, 891, 1086, 2294
MspR9I	CCNGG	5 cut(s)	259, 622, 1086, 1087, 2117
MunI	CAATTG	1 cut(s)	1110
Mva1269I	GAATGC	2 cut(s)	262, 2155
MvaI	CCWGG	2 cut(s)	622, 2117
MvnI	CGCG	1 cut(s)	1148
MwoI	GCNNNNNNNGC	9 cut(s)	173, 245, 931, 1421, 1665, 2051, 2175, 2312, 2389
NciI	CCSGG	3 cut(s)	259, 1086, 1087
NcoI	CCATGG	2 cut(s)	1440, 1975
NdeI	CATATG	1 cut(s)	1516
NheI	GCTAGC	1 cut(s)	172
NlaIV	GGNNCC	6 cut(s)	492, 626, 889, 1168, 1942, 2307
NmuCI	GTSAC	3 cut(s)	533, 1067, 2058
NsiI	ATGCAT	3 cut(s)	63, 139, 936
NspI	RCATGY	1 cut(s)	984
NspV	TTCGAA	1 cut(s)	2107
PagI	TCATGA	1 cut(s)	217
PceI	AGGCCT	2 cut(s)	1602, 2368
PcsI	WCGNNNNNNNCGW	1 cut(s)	2255
PctI	GAATGC	2 cut(s)	262, 2155
PdmI	GAANNNNTTC	3 cut(s)	692, 1589, 2486
PfeI	GAWTC	2 cut(s)	296, 2351
PflFI	GACNNNGTC	1 cut(s)	851
PkrI	GCNGC	2 cut(s)	169, 1951
PleI	GAGTC	4 cut(s)	1158, 1900, 2238, 2534
PmaCI	CACGTG	1 cut(s)	524
PmlI	CACGTG	1 cut(s)	524
PpsI	GAGTC	4 cut(s)	1158, 1900, 2238, 2534
Ppu21I	YACGTR	1 cut(s)	524
PshBI	ATTAAT	1 cut(s)	1014
PsiI	TTATAA	1 cut(s)	512
Psp6I	CCWGG	2 cut(s)	620, 2115
PspCI	CACGTG	1 cut(s)	524
PspFI	CCCAGC	2 cut(s)	1966, 2220
PspGI	CCWGG	2 cut(s)	620, 2115
PspN4I	GGNNCC	6 cut(s)	492, 626, 889, 1168, 1942, 2307
PspPI	GGNCC	3 cut(s)	625, 1088, 1556
PstI	CTGCAG	1 cut(s)	1362
PsuI	RGATCY	4 cut(s)	331, 490, 503, 1166
PsyI	GACNNNGTC	1 cut(s)	851
RseI	CAYNNNNRTG	3 cut(s)	66, 1055, 1857
SatI	GCNGC	2 cut(s)	168, 1950
Sau96I	GGNCC	3 cut(s)	625, 1088, 1556
SchI	GAGTC	4 cut(s)	1159, 1900, 2239, 2534
ScrFI	CCNGG	5 cut(s)	259, 622, 1086, 1087, 2117
SfaNI	GCATC	7 cut(s)	70, 124, 211, 470, 921, 1811, 2036
SfcI	CTRYAG	2 cut(s)	1358, 1548
SfuI	TTCGAA	1 cut(s)	2107
SinI	GGWCC	2 cut(s)	625, 1556
SmaI	CCCGGG	1 cut(s)	1087
SmiMI	CAYNNNNRTG	3 cut(s)	66, 1055, 1857
SmlI	CTYRAG	4 cut(s)	548, 818, 2567, 2577
SmoI	CTYRAG	4 cut(s)	548, 818, 2567, 2577
SpeI	ACTAGT	1 cut(s)	1810
SseBI	AGGCCT	2 cut(s)	1602, 2368
SsiI	CCGC	7 cut(s)	616, 670, 1146, 1380, 1764, 2309, 2418
SspI	AATATT	1 cut(s)	1936
SspMI	CTAG	3 cut(s)	173, 1080, 1811
StuI	AGGCCT	2 cut(s)	1602, 2368
StyD4I	CCNGG	5 cut(s)	257, 620, 1084, 1085, 2115
StyI	CCWWGG	2 cut(s)	1440, 1975
TaaI	ACNGT	4 cut(s)	43, 693, 1096, 2077
TaiI	ACGT	3 cut(s)	526, 596, 763
TaqI	TCGA	4 cut(s)	843, 1161, 2107, 2245
TatI	WGTACW	3 cut(s)	997, 1845, 1885
TfiI	GAWTC	2 cut(s)	296, 2351
TseFI	GTSAC	3 cut(s)	533, 1067, 2058
TseI	GCWGC	2 cut(s)	167, 1949
Tsp45I	GTSAC	3 cut(s)	533, 1067, 2058
TspMI	CCCGGG	1 cut(s)	1085
Tth111I	GACNNNGTC	1 cut(s)	851
Vha464I	CTTAAG	1 cut(s)	548
VpaK11BI	GGWCC	2 cut(s)	625, 1556
VspI	ATTAAT	1 cut(s)	1014
XapI	RAATTY	5 cut(s)	407, 587, 779, 813, 2562
XceI	RCATGY	1 cut(s)	984
XmaI	CCCGGG	1 cut(s)	1085
XmnI	GAANNNNTTC	3 cut(s)	692, 1589, 2486
XspI	CTAG	3 cut(s)	173, 1080, 1811
Zsp2I	ATGCAT	3 cut(s)	63, 139, 936

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.