Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0000934

Physical Location & Seq

Genomic Coordinates Reverse (-)

69084992 .. 69088854

Gene Structure 3863 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG485200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2670 bp

ATGCGGTTTTGTTTGAAGTTAAATGTGGCCGTACTTACAACTAGAAGATCGATGAAGCTCCCCTCGTTGACTGTGTTGCAGCATGTTTTTGTCATCTTTTTGGTTACAAGTGTGCTGGTACTTTCTAGTTTATTGATAGGAATCATCAAACGTATCGAGCATAATGTTTATGTACTGGCTCCCAGGGAGAGAGAGTTGATGAACTTTGTTCATAACCATTGCAGTGAGTCACTTATCCTCATTTTTGTGATGATTGCTACAATGGGTGTCTTCATCTTCAGTTACTCTTTCATAATGCTAACTGTCGCGAAACGGGAAATGCATCGTTATGCCACACTCATAGAACAAAGGGAGAAAACTGAGCAAGCTGAGAGAAAGAGCATGAGGAAAAGTGATGCATTTGCTAAAGCAAGCCATGACATTCGTGCCGCGCTTGCTGGAATTATTAGTTGGATCAACTTCTGTAAAGATGATATTCATGATGCGCTTGATCTTCATGCCACAAGTGCTGGAACTACCCGGCATTCTGAAATAGAGACAATCTTAACAAAAATAGATTCCAACTTAAAAAGACTGGATGTTCATGCAGAAGATCTTTTAGGTATATTGAACTCTGTCCTTGATAAAAGCAAAATTGAAGCAGGTAAGATGGTACTTGAAAATGAAGAATTTGATGTGGCTCAGCTTGTTGAAGAGGTAGTGGATTTGTTTCTTCCAACAGCATCAATGAAGGGATTAGATGTGGTGTTGGATCCTTGCGATGGATCTGTTATAAAGTTTGCACGTGTGAGAGGTGACAGGGGAAGGCTTAAGCAGATACTAAACAACTTGCTAAGCAATGCTGTTAAATTTACGTCAGAAGGGCAAATCACAATCCGCACCTGGGTCCGAAAACCAAGTTTTAAGAAGTCAATAACTGCTTCTCGTGAGCGGACTAATGGTTTCTTGAAACAGTTCTTGTGCTTCTTTAATTACAAGAACATGAACAATGATGACAAGGAAGTAGTGGATGGTTCTCAACGTGATCCAAATGCTTTGGAATTTGTTTTTGAGGTGGATGATACTGGTAGGGGAATTCTCAAGGAGAGGCAAAAATCGGTGTTCGAGGACTATGTCCAAGTCAAAGAAAAAGCACTTGGAGAAGGTGGTACCGGCTTAGGACTGGGAATTGTTCAATCTCTGGTGCGTTTGATGCATGGAGAAATAGGAATTGTGGACAAGGAGATTGGGGAAAGAGGGACATGCTTCAGGTTCAATGTACTGCTAAGTACTATTAATGCCTGTGAGGATAGCATAAAAGTAGAACCAGACATTGAAATGGGAATTAGTGACTTAAACCCTAGTCCCGGGCCGACTGTCAATCAAACACCAATTGCAAGCCCCAAGTTGAACATTCGCAGTACCACCGCGAGTCCTAAGGTCGAGGGATCCTATGTTGTAATGCTGATTAAAAATGCAGAGCGCAGGAGAGTTATACAGAAGTTTATGGAGAGACTTGGGATAAAAGTATCAGTAGCAGAACGATGGGAACAACTTGCTCGTACTCTCCAGAACATAAAAAACAAGAAGGTTTACCATTCTCAACATAATTCCATATCAGGAATACCCGATTTGGGTCTGCAGGATTGCTTGATCAAATCCGCCTCATGCAACTCCAACTTCAGCTTTAATAGAGCAAAGGAAGCGTCTTTCATGAGTTCCATGGATGGATCAACAGATAACAACATTCTTCCTCTCTTTCATAAGAAGAGTAGTAGTAGTAATCTTCGTGGAGCATATGATCGCTTCATAATGCTACTTATTGATACTACAGGTGGACCACTCCCAGAACTATGCAAGATTGTGAATGATTTCAAAAGAGGCCTCCAAAATGGTTGGTACTGCAAGGTTGTTTGGTTATCAAGTCCATTTACTCATAGCAATTTAAGCTTCAACAGAGATATGTTGGATGGCGACGATGTTATCAAACACAAGCCTCTACATGGTACTTGTCTATATGAAGTTGTAAGACTTCTTCCGGAGTGCGGGGGCGCATTACCAAAAAGATCATCAGGTCAGGTTGCACCAAAACTAGTTTCCACAGCTCCTGGTTCATCAAGAAATCGGTACATTCATACCGATGATGACAACTCCTCTGACCAGATAGTACAAGAGAGTAATTCACCAACTCTTCGACATCATCAATCTCCTAATAATATTGGCTCCAAATCAGCAAGTCAATCAGCCCCAGCAGACCATGGCAACAAACCCTTGACTGGGAAGAAAATCTTGGTTGCAGAGGACACAGCATCGTTACGCATGGTGGCTATGCAGGTTTTGTCACGATTGGGTGCAACTGTGAAGCTTTGTGAAAATGGAAGAGAAGCTTTGGATCTAATTCGCAATGATCTACTCAATCAAAGGAAACATGTCTATGACTATATACTGATGGATTGCCAGATGCCAGAAATGGATGGGTTCGAAGCGACCAGGGAAATCAGGAAAGAGGAGAAATCTTACAATGTTCGCATTCCGATCATCGCATTAACAGCTCATGCAAAAGGAGGCGAGGAAACAAGAAGGATGATGGAGGCTGGTATGGACGAACATTTAGAGAAAACCTCCATAGTGACTAGTCTAGGGGAAACACTAGCAAAGATTGATCATAGTACTAAAGCAATAACTAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009553 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009888 GO:0009987 GO:0010033 GO:0010087 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0018106 GO:0018193 GO:0018202 GO:0019538 GO:0023052 GO:0030054 GO:0032501 GO:0032502 GO:0032870 GO:0036211 GO:0040007 GO:0042221 GO:0042802 GO:0042803 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046983 GO:0048229 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0071704 GO:0071944 GO:0080117 GO:0080190 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HATPase_c HisKA Response_reg

Protein Analysis

889

Amino Acids

99.41

Weight (kDa)

8.59

Isoelectric Point (pI)

39.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c	PF02518	347 - 420	3.7e-12	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response_reg	PF00072	756 - 868	2.2e-19	Response regulator receiver domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000934)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02090
fragaria_vesca	FvH4_2g00520 FvH4_5g39340 FvH4_5g39350
malus_domestica	MD03G1295900.v1.1 MD03G1296400.v1.1 MD11G1315000.v1.1 MD11G1315800.v1.1
prunus_persica	Prupe.8G031600_v2.0.a1 Prupe.8G270900_v2.0.a1 Prupe.8G271500_v2.0.a1
pyrus_communis	pycom03g23400 pycom03g23460 pycom11g27520 pycom11g27570
rosa_chinensis	RchiOBHm_Chr6g0250521 RchiOBHm_Chr6g0250591 RchiOBHm_Chr6g0250601 RchiOBHm_Chr6g0250841 RchiOBHm_Chr7g0241621 RchiOBHm_Chr7g0241631
rosa_laevigata	RLG00000000559 RLG00000000560 RLG00000015494 RLG00000015498 RLG00000015520 RLG00000015530 RLG00000015533 RLG00000015535
rosa_multiflora	Rmu_co8325851.1_g000001 Rmu_co8374241.1_g000001 Rmu_co8391029.1_g000001 Rmu_sc0002268.1_g000012 Rmu_sc0002268.1_g000013 Rmu_sc0007248.1_g000005 Rmu_sc0033402.1_g000001
rosa_roxburghii	Rroxscaffold_3G00218870 Rroxscaffold_7G00217140 Rroxscaffold_7G00217190
rosa_rugosa	Rorug07G0345700 Rorug07G0345800
rosa_samantha	Rh6AG006300 Rh6AG007200 Rh6AG007300 Rh6BG003700 Rh6BG004300 Rh6CG004500 Rh6DG004500 Rh6DG005300 Rh7AG500200 Rh7AG500300 Rh7BG471300 Rh7BG471400 Rh7CG516700 Rh7CG516800 Rh7DG485200 Rh7DG485300
rosa_wichuraiana	Rw0G020910 Rw6G000690 Rw6G000760 Rw6G000800 Rw6G000850 Rw7G042250 Rw7G042260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	773
Acc36I	ACCTGC	2 cut(s)	632, 2302
Acc65I	GGTACC	1 cut(s)	1148
AccB1I	GGYRCC	1 cut(s)	1148
AccBSI	CCGCTC	1 cut(s)	931
AccII	CGCG	3 cut(s)	308, 431, 1409
AccIII	TCCGGA	1 cut(s)	2017
AciI	CCGC	7 cut(s)	4, 429, 877, 931, 1407, 1641, 2025
AclWI	GGATC	9 cut(s)	461, 746, 759, 772, 1019, 1422, 1435, 1717, 2379
AcoI	YGGCCR	1 cut(s)	27
AcsI	RAATTY	4 cut(s)	668, 848, 1040, 1074
AcuI	CTGAAG	3 cut(s)	262, 1231, 1645
AcvI	CACGTG	1 cut(s)	785
AfiI	CCNNNNNNNGG	8 cut(s)	761, 883, 1346, 1613, 1982, 2024, 2255, 2256
AflII	CTTAAG	1 cut(s)	809
AflIII	ACRYGT	2 cut(s)	784, 2407
AhlI	ACTAGT	2 cut(s)	2071, 2612
AjnI	CCWGG	4 cut(s)	182, 881, 2086, 2468
AjuI	GAANNNNNNNTTGG	8 cut(s)	433, 465, 1119, 1151, 2059, 2091, 2252, 2284
Alw26I	GTCTC	2 cut(s)	530, 1486
AlwI	GGATC	9 cut(s)	461, 746, 759, 772, 1019, 1422, 1435, 1717, 2379
AlwNI	CAGNNNCTG	1 cut(s)	2087
Ama87I	CYCGRG	1 cut(s)	1346
Aor13HI	TCCGGA	1 cut(s)	2017
AoxI	GGCC	3 cut(s)	27, 1349, 1861
ApeKI	GCWGC	1 cut(s)	79
ApoI	RAATTY	4 cut(s)	668, 848, 1040, 1074
ArsI	GACNNNNNNTTYG	2 cut(s)	1670, 1702
AseI	ATTAAT	1 cut(s)	1275
Asp700I	GAANNNNTTC	2 cut(s)	953, 1850
Asp718I	GGTACC	1 cut(s)	1148
AspLEI	GCGC	4 cut(s)	433, 487, 1464, 2033
AspS9I	GGNCC	3 cut(s)	886, 1349, 1817
AsuC2I	CCSGG	3 cut(s)	520, 1347, 1348
AsuHPI	GGTGA	2 cut(s)	806, 2154
AsuII	TTCGAA	1 cut(s)	2460
AvaI	CYCGRG	1 cut(s)	1346
AvaII	GGWCC	2 cut(s)	886, 1817
AxyI	CCTNAGG	1 cut(s)	1416
BamHI	GGATCC	2 cut(s)	751, 1427
BanI	GGYRCC	1 cut(s)	1148
BarI	GAAGNNNNNNTAC	2 cut(s)	1998, 2030
BauI	CACGAG	1 cut(s)	924
BbrPI	CACGTG	1 cut(s)	785
BbsI	GAAGAC	1 cut(s)	262
BbvI	GCAGC	1 cut(s)	91
BccI	CCATC	9 cut(s)	643, 755, 1004, 1518, 1700, 1943, 2422, 2447, 2560
BceAI	ACGGC	1 cut(s)	14
BciT130I	CCWGG	4 cut(s)	184, 883, 2088, 2470
BclI	TGATCA	2 cut(s)	1632, 2641
BcnI	CCSGG	3 cut(s)	520, 1347, 1348
BcoDI	GTCTC	2 cut(s)	530, 1486
BcuI	ACTAGT	2 cut(s)	2071, 2612
BfaI	CTAG	9 cut(s)	42, 126, 1341, 2072, 2613, 2618, 2630, 2664, 2668
BfmI	CTRYAG	2 cut(s)	1619, 1809
BfrI	CTTAAG	1 cut(s)	809
BfuAI	ACCTGC	2 cut(s)	632, 2302
BglII	AGATCT	1 cut(s)	592
BisI	GCNGC	2 cut(s)	80, 429
BlpI	GCTNAGC	2 cut(s)	681, 833
BlsI	GCNGC	2 cut(s)	81, 430
BmcAI	AGTACT	2 cut(s)	1270, 2650
Bme1390I	CCNGG	7 cut(s)	184, 520, 883, 1347, 1348, 2088, 2470
Bme18I	GGWCC	2 cut(s)	886, 1817
BmeT110I	CYCGRG	1 cut(s)	1346
BmgT120I	GGNCC	3 cut(s)	886, 1349, 1817
BmiI	GGNNCC	6 cut(s)	180, 753, 887, 1150, 1429, 2203
BmrFI	CCNGG	7 cut(s)	184, 520, 883, 1347, 1348, 2088, 2470
BmrI	ACTGGG	2 cut(s)	1172, 2265
BmsI	GCATC	7 cut(s)	331, 385, 472, 731, 1182, 2297, 2430
BmuI	ACTGGG	2 cut(s)	1172, 2265
BpiI	GAAGAC	1 cut(s)	262
BplI	GAGNNNNNCTC	2 cut(s)	2585, 2617
BpmI	CTGGAG	1 cut(s)	1532
Bpu10I	CCTNAGC	1 cut(s)	1156
Bpu1102I	GCTNAGC	2 cut(s)	681, 833
Bpu14I	TTCGAA	1 cut(s)	2460
BpuEI	CTTGAG	1 cut(s)	1064
BpuMI	CCSGG	3 cut(s)	520, 1347, 1348
Bsa29I	ATCGAT	1 cut(s)	50
BsaAI	YACGTR	1 cut(s)	785
BsaBI	GATNNNNATC	1 cut(s)	140
BsaJI	CCNNGG	7 cut(s)	182, 183, 882, 1346, 1701, 2236, 2469
BsaWI	WCCGGW	1 cut(s)	2017
BsaXI	ACNNNNNCTCC	2 cut(s)	179, 209
Bsc4I	CCNNNNNNNGG	8 cut(s)	761, 883, 1346, 1613, 1982, 2024, 2255, 2256
Bse118I	RCCGGY	1 cut(s)	1151
Bse1I	ACTGG	5 cut(s)	180, 579, 1069, 1167, 2260
Bse21I	CCTNAGG	1 cut(s)	1416
Bse3DI	GCAATG	3 cut(s)	217, 844, 2389
Bse8I	GATNNNNATC	1 cut(s)	140
BseAI	TCCGGA	1 cut(s)	2017
BseBI	CCWGG	4 cut(s)	184, 883, 2088, 2470
BseCI	ATCGAT	1 cut(s)	50
BseDI	CCNNGG	7 cut(s)	182, 183, 882, 1346, 1701, 2236, 2469
BseGI	GGATG	7 cut(s)	583, 1015, 1063, 1711, 1954, 2458, 2568
BseJI	GATNNNNATC	1 cut(s)	140
BseLI	CCNNNNNNNGG	8 cut(s)	761, 883, 1346, 1613, 1982, 2024, 2255, 2256
BseMI	GCAATG	3 cut(s)	217, 844, 2389
BseMII	CTCAG	3 cut(s)	351, 360, 695
BseNI	ACTGG	5 cut(s)	180, 579, 1069, 1167, 2260
BseRI	GAGGAG	2 cut(s)	2122, 2501
BseXI	GCAGC	1 cut(s)	91
BseYI	CCCAGC	1 cut(s)	2227
Bsh1236I	CGCG	3 cut(s)	308, 431, 1409
BshFI	GGCC	3 cut(s)	29, 1351, 1863
BshNI	GGYRCC	1 cut(s)	1148
BshVI	ATCGAT	1 cut(s)	50
BsiHKCI	CYCGRG	1 cut(s)	1346
BsiSI	CCGG	4 cut(s)	520, 1152, 1347, 2018
BslFI	GGGAC	2 cut(s)	1252, 1329
BslI	CCNNNNNNNGG	8 cut(s)	761, 883, 1346, 1613, 1982, 2024, 2255, 2256
BsmAI	GTCTC	2 cut(s)	530, 1486
BsmFI	GGGAC	2 cut(s)	1252, 1329
BsmI	GAATGC	2 cut(s)	523, 2508
BsnI	GGCC	3 cut(s)	29, 1351, 1863
BsoBI	CYCGRG	1 cut(s)	1346
Bsp119I	TTCGAA	1 cut(s)	2460
Bsp13I	TCCGGA	1 cut(s)	2017
Bsp1720I	GCTNAGC	2 cut(s)	681, 833
Bsp19I	CCATGG	2 cut(s)	1701, 2236
Bsp68I	TCGCGA	1 cut(s)	308
BspACI	CCGC	7 cut(s)	4, 429, 877, 931, 1407, 1641, 2025
BspANI	GGCC	3 cut(s)	29, 1351, 1863
BspCNI	CTCAG	3 cut(s)	352, 361, 694
BspDI	ATCGAT	1 cut(s)	50
BspEI	TCCGGA	1 cut(s)	2017
BspFNI	CGCG	3 cut(s)	308, 431, 1409
BspHI	TCATGA	2 cut(s)	478, 1692
BspLI	GGNNCC	6 cut(s)	180, 753, 887, 1150, 1429, 2203
BspMAI	CTGCAG	1 cut(s)	1623
BspMI	ACCTGC	2 cut(s)	632, 2302
BspPI	GGATC	9 cut(s)	461, 746, 759, 772, 1019, 1422, 1435, 1717, 2379
BspT104I	TTCGAA	1 cut(s)	2460
BspT107I	GGYRCC	1 cut(s)	1148
BspTI	CTTAAG	1 cut(s)	809
BsrBI	CCGCTC	1 cut(s)	931
BsrDI	GCAATG	3 cut(s)	217, 844, 2389
BsrFI	RCCGGY	1 cut(s)	1151
BsrI	ACTGG	5 cut(s)	180, 579, 1069, 1167, 2260
BssAI	RCCGGY	1 cut(s)	1151
BssECI	CCNNGG	7 cut(s)	182, 183, 882, 1346, 1701, 2236, 2469
BssSI	CACGAG	1 cut(s)	924
BssT1I	CCWWGG	2 cut(s)	1701, 2236
Bst2BI	CACGAG	1 cut(s)	924
Bst2UI	CCWGG	4 cut(s)	184, 883, 2088, 2470
Bst4CI	ACNGT	5 cut(s)	73, 304, 954, 1357, 2338
Bst6I	CTCTTC	4 cut(s)	687, 1742, 2175, 2353
BstAFI	CTTAAG	1 cut(s)	809
BstBAI	YACGTR	1 cut(s)	785
BstBI	TTCGAA	1 cut(s)	2460
BstC8I	GCNNGC	4 cut(s)	366, 412, 435, 1378
BstDEI	CTNAG	7 cut(s)	360, 369, 681, 833, 1156, 1265, 1416
BstDSI	CCRYGG	2 cut(s)	1701, 2236
BstF5I	GGATG	7 cut(s)	583, 1015, 1063, 1711, 1954, 2458, 2568
BstFNI	CGCG	3 cut(s)	308, 431, 1409
BstHHI	GCGC	4 cut(s)	433, 487, 1464, 2033
BstMAI	GTCTC	2 cut(s)	530, 1486
BstMWI	GCNNNNNNNGC	6 cut(s)	434, 506, 1192, 1682, 1926, 2528
BstNI	CCWGG	4 cut(s)	184, 883, 2088, 2470
BstNSI	RCATGY	3 cut(s)	86, 1245, 2411
BstSCI	CCNGG	7 cut(s)	182, 518, 881, 1345, 1346, 2086, 2468
BstSFI	CTRYAG	2 cut(s)	1619, 1809
BstUI	CGCG	3 cut(s)	308, 431, 1409
BstV1I	GCAGC	1 cut(s)	91
BstV2I	GAAGAC	1 cut(s)	262
BstX2I	RGATCY	5 cut(s)	592, 751, 764, 1427, 2371
BstYI	RGATCY	5 cut(s)	592, 751, 764, 1427, 2371
Bsu15I	ATCGAT	1 cut(s)	50
Bsu36I	CCTNAGG	1 cut(s)	1416
BsuRI	GGCC	3 cut(s)	29, 1351, 1863
BsuTUI	ATCGAT	1 cut(s)	50
BtgI	CCRYGG	2 cut(s)	1701, 2236
BtgZI	GCGATG	2 cut(s)	774, 2503
BtsCI	GGATG	7 cut(s)	583, 1015, 1063, 1711, 1954, 2458, 2568
BtsI	GCAGTG	1 cut(s)	229
BtsIMutI	CAGTG	1 cut(s)	229
BtuMI	TCGCGA	1 cut(s)	308
BveI	ACCTGC	2 cut(s)	632, 2302
Cac8I	GCNNGC	4 cut(s)	366, 412, 435, 1378
CaiI	CAGNNNCTG	1 cut(s)	2087
CciI	TCATGA	2 cut(s)	478, 1692
CfoI	GCGC	4 cut(s)	433, 487, 1464, 2033
Cfr10I	RCCGGY	1 cut(s)	1151
Cfr13I	GGNCC	3 cut(s)	886, 1349, 1817
Cfr9I	CCCGGG	1 cut(s)	1346
ClaI	ATCGAT	1 cut(s)	50
CseI	GACGC	1 cut(s)	1674
DdeI	CTNAG	7 cut(s)	360, 369, 681, 833, 1156, 1265, 1416
EaeI	YGGCCR	1 cut(s)	27
Eam1104I	CTCTTC	4 cut(s)	687, 1742, 2175, 2353
EarI	CTCTTC	4 cut(s)	687, 1742, 2175, 2353
EciI	GGCGGA	1 cut(s)	1630
Eco130I	CCWWGG	2 cut(s)	1701, 2236
Eco147I	AGGCCT	1 cut(s)	1863
Eco47I	GGWCC	2 cut(s)	886, 1817
Eco57I	CTGAAG	3 cut(s)	262, 1231, 1645
Eco72I	CACGTG	1 cut(s)	785
Eco81I	CCTNAGG	1 cut(s)	1416
Eco88I	CYCGRG	1 cut(s)	1346
EcoRI	GAATTC	1 cut(s)	1074
EcoRII	CCWGG	4 cut(s)	182, 881, 2086, 2468
EcoT14I	CCWWGG	2 cut(s)	1701, 2236
EcoT22I	ATGCAT	3 cut(s)	324, 400, 1197
ErhI	CCWWGG	2 cut(s)	1701, 2236
FalI	AAGNNNNNCTT	4 cut(s)	2252, 2284, 2350, 2382
FaqI	GGGAC	2 cut(s)	1252, 1329
FauI	CCCGC	1 cut(s)	2018
FauNDI	CATATG	1 cut(s)	1777
FbaI	TGATCA	2 cut(s)	1632, 2641
Fnu4HI	GCNGC	2 cut(s)	80, 429
FokI	GGATG	7 cut(s)	590, 1022, 1070, 1718, 1961, 2465, 2575
Fsp4HI	GCNGC	2 cut(s)	80, 429
FspBI	CTAG	9 cut(s)	42, 126, 1341, 2072, 2613, 2618, 2630, 2664, 2668
GlaI	GCGC	4 cut(s)	432, 486, 1463, 2032
GluI	GCNGC	2 cut(s)	80, 429
GsaI	CCCAGC	1 cut(s)	2231
GsuI	CTGGAG	1 cut(s)	1532
HaeIII	GGCC	3 cut(s)	29, 1351, 1863
HapII	CCGG	4 cut(s)	520, 1152, 1347, 2018
HgaI	GACGC	1 cut(s)	1674
HhaI	GCGC	4 cut(s)	433, 487, 1464, 2033
Hin6I	GCGC	4 cut(s)	431, 485, 1462, 2031
HinP1I	GCGC	4 cut(s)	431, 485, 1462, 2031
HincII	GTYRAC	1 cut(s)	69
HindII	GTYRAC	1 cut(s)	69
HindIII	AAGCTT	3 cut(s)	1927, 2342, 2364
HinfI	GANTC	4 cut(s)	141, 227, 557, 1411
HpaII	CCGG	4 cut(s)	520, 1152, 1347, 2018
HphI	GGTGA	2 cut(s)	806, 2154
Hpy166II	GTNNAC	4 cut(s)	69, 1216, 1573, 1817
Hpy188I	TCNGA	5 cut(s)	529, 859, 890, 2137, 2514
Hpy8I	GTNNAC	4 cut(s)	69, 1216, 1573, 1817
Hpy99I	CGWCG	1 cut(s)	1958
HpyAV	CCTTC	6 cut(s)	724, 798, 854, 1136, 1561, 2553
HpyCH4III	ACNGT	5 cut(s)	73, 304, 954, 1357, 2338
HpyCH4IV	ACGT	4 cut(s)	151, 784, 854, 1021
HpyF10VI	GCNNNNNNNGC	6 cut(s)	434, 506, 1192, 1682, 1926, 2528
HpyF3I	CTNAG	7 cut(s)	360, 369, 681, 833, 1156, 1265, 1416
HpySE526I	ACGT	4 cut(s)	151, 784, 854, 1021
HspAI	GCGC	4 cut(s)	431, 485, 1462, 2031
Kpn2I	TCCGGA	1 cut(s)	2017
KpnI	GGTACC	1 cut(s)	1152
Ksp22I	TGATCA	2 cut(s)	1632, 2641
LmnI	GCTCC	5 cut(s)	63, 184, 1772, 2089, 2207
Lsp1109I	GCAGC	1 cut(s)	91
LweI	GCATC	7 cut(s)	331, 385, 472, 731, 1182, 2297, 2430
MaeI	CTAG	9 cut(s)	42, 126, 1341, 2072, 2613, 2618, 2630, 2664, 2668
MaeII	ACGT	4 cut(s)	151, 784, 854, 1021
MaeIII	GTNAC	8 cut(s)	103, 228, 281, 794, 1328, 2292, 2319, 2608
MbiI	CCGCTC	1 cut(s)	931
MfeI	CAATTG	1 cut(s)	1371
MflI	RGATCY	5 cut(s)	592, 751, 764, 1427, 2371
MlyI	GAGTC	2 cut(s)	236, 1420
MmeI	TCCRAC	6 cut(s)	431, 585, 729, 740, 1680, 1926
Mph1103I	ATGCAT	3 cut(s)	324, 400, 1197
MroI	TCCGGA	1 cut(s)	2017
MroXI	GAANNNNTTC	2 cut(s)	953, 1850
MslI	CAYNNNNRTG	6 cut(s)	222, 245, 327, 1316, 2118, 2412
MspCI	CTTAAG	1 cut(s)	809
MspI	CCGG	4 cut(s)	520, 1152, 1347, 2018
MspR9I	CCNGG	7 cut(s)	184, 520, 883, 1347, 1348, 2088, 2470
MunI	CAATTG	1 cut(s)	1371
Mva1269I	GAATGC	2 cut(s)	523, 2508
MvaI	CCWGG	4 cut(s)	184, 883, 2088, 2470
MvnI	CGCG	3 cut(s)	308, 431, 1409
MwoI	GCNNNNNNNGC	6 cut(s)	434, 506, 1192, 1682, 1926, 2528
NciI	CCSGG	3 cut(s)	520, 1347, 1348
NcoI	CCATGG	2 cut(s)	1701, 2236
NdeI	CATATG	1 cut(s)	1777
NlaIV	GGNNCC	6 cut(s)	180, 753, 887, 1150, 1429, 2203
NmuCI	GTSAC	5 cut(s)	228, 794, 1328, 2319, 2608
NruI	TCGCGA	1 cut(s)	308
NsiI	ATGCAT	3 cut(s)	324, 400, 1197
NspI	RCATGY	3 cut(s)	86, 1245, 2411
NspV	TTCGAA	1 cut(s)	2460
PagI	TCATGA	2 cut(s)	478, 1692
PasI	CCCWGGG	1 cut(s)	183
PceI	AGGCCT	1 cut(s)	1863
PciI	ACATGT	1 cut(s)	2407
PctI	GAATGC	2 cut(s)	523, 2508
PdmI	GAANNNNTTC	2 cut(s)	953, 1850
PfeI	GAWTC	2 cut(s)	141, 557
PflFI	GACNNNGTC	1 cut(s)	1112
PkrI	GCNGC	2 cut(s)	81, 430
PleI	GAGTC	2 cut(s)	235, 1419
PmaCI	CACGTG	1 cut(s)	785
PmlI	CACGTG	1 cut(s)	785
PpsI	GAGTC	2 cut(s)	235, 1419
Ppu21I	YACGTR	1 cut(s)	785
PscI	ACATGT	1 cut(s)	2407
PshBI	ATTAAT	1 cut(s)	1275
PsiI	TTATAA	1 cut(s)	773
Psp6I	CCWGG	4 cut(s)	182, 881, 2086, 2468
PspCI	CACGTG	1 cut(s)	785
PspFI	CCCAGC	1 cut(s)	2227
PspGI	CCWGG	4 cut(s)	182, 881, 2086, 2468
PspN4I	GGNNCC	6 cut(s)	180, 753, 887, 1150, 1429, 2203
PspPI	GGNCC	3 cut(s)	886, 1349, 1817
PstI	CTGCAG	1 cut(s)	1623
PstNI	CAGNNNCTG	1 cut(s)	2087
PsuI	RGATCY	5 cut(s)	592, 751, 764, 1427, 2371
PsyI	GACNNNGTC	1 cut(s)	1112
RruI	TCGCGA	1 cut(s)	308
RseI	CAYNNNNRTG	6 cut(s)	222, 245, 327, 1316, 2118, 2412
SatI	GCNGC	2 cut(s)	80, 429
Sau96I	GGNCC	3 cut(s)	886, 1349, 1817
ScaI	AGTACT	2 cut(s)	1270, 2650
SchI	GAGTC	2 cut(s)	236, 1420
ScrFI	CCNGG	7 cut(s)	184, 520, 883, 1347, 1348, 2088, 2470
SfaNI	GCATC	7 cut(s)	331, 385, 472, 731, 1182, 2297, 2430
SfcI	CTRYAG	2 cut(s)	1619, 1809
SfuI	TTCGAA	1 cut(s)	2460
SinI	GGWCC	2 cut(s)	886, 1817
SmaI	CCCGGG	1 cut(s)	1348
SmiMI	CAYNNNNRTG	6 cut(s)	222, 245, 327, 1316, 2118, 2412
SmlI	CTYRAG	2 cut(s)	809, 1079
SmoI	CTYRAG	2 cut(s)	809, 1079
SpeI	ACTAGT	2 cut(s)	2071, 2612
SseBI	AGGCCT	1 cut(s)	1863
SsiI	CCGC	7 cut(s)	4, 429, 877, 931, 1407, 1641, 2025
SspI	AATATT	1 cut(s)	2197
SspMI	CTAG	9 cut(s)	42, 126, 1341, 2072, 2613, 2618, 2630, 2664, 2668
StuI	AGGCCT	1 cut(s)	1863
StyD4I	CCNGG	7 cut(s)	182, 518, 881, 1345, 1346, 2086, 2468
StyI	CCWWGG	2 cut(s)	1701, 2236
TaaI	ACNGT	5 cut(s)	73, 304, 954, 1357, 2338
TaiI	ACGT	4 cut(s)	154, 787, 857, 1024
TaqI	TCGA	6 cut(s)	50, 156, 1104, 1422, 2173, 2460
TatI	WGTACW	5 cut(s)	172, 1258, 1268, 2146, 2648
TauI	GCSGC	1 cut(s)	431
TfiI	GAWTC	2 cut(s)	141, 557
TscAI	CASTG	1 cut(s)	229
TseFI	GTSAC	5 cut(s)	228, 794, 1328, 2319, 2608
TseI	GCWGC	1 cut(s)	79
Tsp45I	GTSAC	5 cut(s)	228, 794, 1328, 2319, 2608
TspMI	CCCGGG	1 cut(s)	1346
TspRI	CASTG	1 cut(s)	229
Tth111I	GACNNNGTC	1 cut(s)	1112
Vha464I	CTTAAG	1 cut(s)	809
VpaK11BI	GGWCC	2 cut(s)	886, 1817
VspI	ATTAAT	1 cut(s)	1275
XapI	RAATTY	4 cut(s)	668, 848, 1040, 1074
XceI	RCATGY	3 cut(s)	86, 1245, 2411
XmaI	CCCGGG	1 cut(s)	1346
XmnI	GAANNNNTTC	2 cut(s)	953, 1850
XspI	CTAG	9 cut(s)	42, 126, 1341, 2072, 2613, 2618, 2630, 2664, 2668
ZrmI	AGTACT	2 cut(s)	1270, 2650
Zsp2I	ATGCAT	3 cut(s)	324, 400, 1197

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.