Rorug07G0345700

Histidine kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
38394112 .. 38394820
709 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0345700.1

Sequence Viewer

Length: 180 bp
ATGCGTGTTCAGGAGGAACATACTGCGCTGCAGGAACATGACAAAATGGAACAAAGTCTAAAAGCTAAACACAGTGAAGAGCTAAGGCAGATCCGTGAAGAGCTAAGGCAGATCCAACTTCAAGCTGAAAACAAGTTGAGAGATAGTTGGAAGAGGCAATCAGGGAGATTGAGCAACTGA

Protein Analysis

59

Amino Acids

7.18

Weight (kDa)

8.2

Isoelectric Point (pI)

93.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 85, 106
AgsI TTSAA 1 cut(s) 122
AluBI AGCT 4 cut(s) 65, 82, 103, 125
AluI AGCT 4 cut(s) 65, 82, 103, 125
AlwI GGATC 2 cut(s) 85, 106
ApeKI GCWGC 1 cut(s) 28
AspLEI GCGC 1 cut(s) 28
BbvI GCAGC 1 cut(s) 15
BfmI CTRYAG 1 cut(s) 29
BisI GCNGC 1 cut(s) 29
BlsI GCNGC 1 cut(s) 30
Bpu10I CCTNAGC 2 cut(s) 83, 104
BseXI GCAGC 1 cut(s) 15
Bsp143I GATC 2 cut(s) 90, 111
BspMAI CTGCAG 1 cut(s) 33
BspPI GGATC 2 cut(s) 85, 106
BspQI GCTCTTC 2 cut(s) 72, 93
BssMI GATC 2 cut(s) 90, 111
Bst4CI ACNGT 1 cut(s) 74
Bst6I CTCTTC 3 cut(s) 72, 93, 146
BstDEI CTNAG 2 cut(s) 83, 104
BstHHI GCGC 1 cut(s) 28
BstKTI GATC 2 cut(s) 93, 114
BstMBI GATC 2 cut(s) 90, 111
BstSFI CTRYAG 1 cut(s) 29
BstV1I GCAGC 1 cut(s) 15
BstX2I RGATCY 2 cut(s) 90, 111
BstYI RGATCY 2 cut(s) 90, 111
BtsIMutI CAGTG 1 cut(s) 79
CfoI GCGC 1 cut(s) 28
CviAII CATG 1 cut(s) 38
CviJI RGCY 4 cut(s) 65, 82, 103, 125
CviKI_1 RGCY 4 cut(s) 65, 82, 103, 125
DdeI CTNAG 2 cut(s) 83, 104
DpnI GATC 2 cut(s) 92, 113
DpnII GATC 2 cut(s) 90, 111
Eam1104I CTCTTC 3 cut(s) 72, 93, 146
EarI CTCTTC 3 cut(s) 72, 93, 146
FaeI CATG 1 cut(s) 41
FaiI YATR 2 cut(s) 21, 39
FatI CATG 1 cut(s) 37
Fnu4HI GCNGC 1 cut(s) 29
Fsp4HI GCNGC 1 cut(s) 29
GlaI GCGC 1 cut(s) 27
GluI GCNGC 1 cut(s) 29
HhaI GCGC 1 cut(s) 28
Hin1II CATG 1 cut(s) 41
Hin6I GCGC 1 cut(s) 26
HinP1I GCGC 1 cut(s) 26
Hpy188III TCNNGA 1 cut(s) 11
HpyCH4III ACNGT 1 cut(s) 74
HpyCH4V TGCA 1 cut(s) 31
HpyF3I CTNAG 2 cut(s) 83, 104
Hsp92II CATG 1 cut(s) 41
HspAI GCGC 1 cut(s) 26
Kzo9I GATC 2 cut(s) 90, 111
LguI GCTCTTC 2 cut(s) 72, 93
LpnPI CCDG 2 cut(s) 17, 147
Lsp1109I GCAGC 1 cut(s) 15
MalI GATC 2 cut(s) 92, 113
MboI GATC 2 cut(s) 90, 111
MboII GAAGA 3 cut(s) 89, 110, 163
MflI RGATCY 2 cut(s) 90, 111
MmeI TCCRAC 2 cut(s) 128, 139
MnlI CCTC 2 cut(s) 7, 147
NdeII GATC 2 cut(s) 90, 111
NlaIII CATG 1 cut(s) 41
PciSI GCTCTTC 2 cut(s) 72, 93
PkrI GCNGC 1 cut(s) 30
PstI CTGCAG 1 cut(s) 33
PsuI RGATCY 2 cut(s) 90, 111
SapI GCTCTTC 2 cut(s) 72, 93
SatI GCNGC 1 cut(s) 29
Sau3AI GATC 2 cut(s) 90, 111
SetI ASST 4 cut(s) 67, 84, 105, 127
SfcI CTRYAG 1 cut(s) 29
SgeI CNNG 8 cut(s) 17, 23, 44, 50, 107, 134, 145, 174
TaaI ACNGT 1 cut(s) 74
TscAI CASTG 1 cut(s) 79
TseI GCWGC 1 cut(s) 28
TspGWI ACGGA 1 cut(s) 83
TspRI CASTG 1 cut(s) 79
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.