Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0000934

Physical Location & Seq

Genomic Coordinates Reverse (-)

23222148 .. 23226524

Gene Structure 4377 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g23400.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1857 bp

ATGAATAAAAGCCTTGCATTTGCTACAACAAGCCATGACATTCGTGCTGCTCTAGTCGGAATCACAGGTTTGATTGACATATCTAAAGATGAAGTTTCCTTGGGTTCTGAGTTGGAGACCAATTTAAGGCAGATGGAAACTTGTGCAAAACACCTCTTTGGTATATTGAACTCTATTCTGGATACGAGTACGATAGAATTAATTTGTATCATCTTGTGGGTTTTAAAAAAAGGCATAGAAGTGGTGTTGGATCCTAATGATAGCTCTCTTATTAAGTTTCCGCATGCAATAGGCGACAGGGGTAGACTAAAACAGATATTATGCAACTTAATGAGCAACACCGTCAAGTTTACGTCGGAGGGACTTGTCACAGTCCGCGCTTGGGTCGAAAAACTCAGTTTTAAGAACTCAATAACTGCTTCAAGCAAGACCCAAGCCGACATGGGAAGAATGAAGCATGATCCAAATGCTTTGGAATTTGTATTTGAGATGGATAATACAGGAAAAGAAAAAATCAGTGTAAGTTTGACGCACGGAGAAATAGGAATTGTGGACAAGGAGATGGGTGAAAGAAGGACATGCTTTAGGTTTAATGTTCTGCTAACTGTACGTGAGAATGTCTCCAAGGATAACACGAAAGAAGTGGACATTGAAATAAGATTTGGCCTAAGTACTTCTGATTTGGGGACAGTAACCACTCACACTCCGAGTACTCCCACATTGAGCATTCACACGCCAAGCCCCATCTTGAACATTCGAACCCCATCTAGTACTCCTAAGGTTGATGGATTAGGATCCTCTGTCGTCTTGTTGATTAAGAATGAAGAGTGTCGCAAAATTTCACAAAAGTTCATGGAAAACCTTGGGATAAAAGTATTTGTTTTGGGTTTGCAGGATTGCTTGAGCAAATCCACATCATGCAAGCTTACCAACAGAGTAAAGGAGGTGTCTTTAATCAATGCAATGGACAAGAGGGGAACCAAATACAACAACAACAACAACAACATGCTCCCTCTTTCTCTCTTTAAGAAGATGAGTCTTCGGGGTACAATGGGCTTTGTATTAGTAGTGATCGATGCCACAGCTGGACCCTTTTCAAAACCATATAAGATTGTGACCGAGGTTGTTTGGTTAGTAAGTCATAGCATCGACTTGAATGATCATGATATGTTTGATCAAGAGGACGTAATCAAACACAAGACGCTTCACAGTGGCCGTCTATACGAAGTGCTTCCACACCAGGATGGAAAAGCGTCCAGAGCTCTTGCTAGTTCCTCAATATCACATCATCATTGGTCGTATAATAATCAGTTAAATCATTCAACCGATGATGACATTGAAGTATTGCAAGACCATAGTAATATTGGTGGTAGTTCAGGTAATGAGACACCTCGCAAGAAAAAAAATTCACCAACGCTGACTCAACAATATCTGTCTCATATTGGCTCCACCACATCAAGAAACTCACAAATTCCAGGTCCTCCTAGTGATCAAACACAAGAGCATGCCAGCGATCCGAATGGGCCTTTGATTGGAAAGAAAATTTTGGTTGCTAATGACATTGAATTGAACCGCAAGCTAGCTCAGATTAATTTGACAAGGTTGGGTGCAACTGTGGAGCTTTGTGGAAATGGAAGAGAAGTTGTTGACCTCGTTCACGGTGCTCTAGCTAATCAAGGAAAACATGGATTCGATTATATACTAATGGATTGTGAGGGGAAATTAGTGGCAGTCGACTGGGTCAGTGGTGGAATTTTACGATTAGGGCTCGCAGAGGGAGAGAAAAGCTTCACACTTGACTTCCGGTCGCCGTCGATCTATTCTCCGCGCGAGATGACTGCAATTGTAACTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009553 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009888 GO:0009987 GO:0010033 GO:0010087 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0018106 GO:0018193 GO:0018202 GO:0019538 GO:0023052 GO:0030054 GO:0032501 GO:0032502 GO:0032870 GO:0036211 GO:0040007 GO:0042221 GO:0042802 GO:0042803 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046983 GO:0048229 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0071704 GO:0071944 GO:0080117 GO:0080190 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HATPase_c HisKA Response_reg

Protein Analysis

619

Amino Acids

68.09

Weight (kDa)

7.07

Isoelectric Point (pI)

29.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000934)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02090
fragaria_vesca	FvH4_2g00520 FvH4_5g39340 FvH4_5g39350
malus_domestica	MD03G1295900.v1.1 MD03G1296400.v1.1 MD11G1315000.v1.1 MD11G1315800.v1.1
prunus_persica	Prupe.8G031600_v2.0.a1 Prupe.8G270900_v2.0.a1 Prupe.8G271500_v2.0.a1
pyrus_communis	pycom03g23400 pycom03g23460 pycom11g27520 pycom11g27570
rosa_chinensis	RchiOBHm_Chr6g0250521 RchiOBHm_Chr6g0250591 RchiOBHm_Chr6g0250601 RchiOBHm_Chr6g0250841 RchiOBHm_Chr7g0241621 RchiOBHm_Chr7g0241631
rosa_laevigata	RLG00000000559 RLG00000000560 RLG00000015494 RLG00000015498 RLG00000015520 RLG00000015530 RLG00000015533 RLG00000015535
rosa_multiflora	Rmu_co8325851.1_g000001 Rmu_co8374241.1_g000001 Rmu_co8391029.1_g000001 Rmu_sc0002268.1_g000012 Rmu_sc0002268.1_g000013 Rmu_sc0007248.1_g000005 Rmu_sc0033402.1_g000001
rosa_roxburghii	Rroxscaffold_3G00218870 Rroxscaffold_7G00217140 Rroxscaffold_7G00217190
rosa_rugosa	Rorug07G0345700 Rorug07G0345800
rosa_samantha	Rh6AG006300 Rh6AG007200 Rh6AG007300 Rh6BG003700 Rh6BG004300 Rh6CG004500 Rh6DG004500 Rh6DG005300 Rh7AG500200 Rh7AG500300 Rh7BG471300 Rh7BG471400 Rh7CG516700 Rh7CG516800 Rh7DG485200 Rh7DG485300
rosa_wichuraiana	Rw0G020910 Rw6G000690 Rw6G000760 Rw6G000800 Rw6G000850 Rw7G042250 Rw7G042260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	304, 1734
AccII	CGCG	3 cut(s)	378, 1828, 1830
AciI	CCGC	4 cut(s)	281, 376, 1573, 1826
AclWI	GGATC	6 cut(s)	245, 258, 455, 789, 802, 1508
AcoI	YGGCCR	1 cut(s)	1213
AcsI	RAATTY	6 cut(s)	476, 837, 1405, 1470, 1542, 1752
AfaI	GTAC	6 cut(s)	190, 609, 673, 712, 772, 1048
AfiI	CCNNNNNNNGG	3 cut(s)	126, 382, 1532
AhdI	GACNNNNNGTC	1 cut(s)	1804
AjnI	CCWGG	2 cut(s)	1239, 1474
AjuI	GAANNNNNNNTTGG	2 cut(s)	645, 677
AluBI	AGCT	9 cut(s)	264, 925, 1085, 1262, 1579, 1583, 1621, 1670, 1788
AluI	AGCT	9 cut(s)	264, 925, 1085, 1262, 1579, 1583, 1621, 1670, 1788
Alw21I	GWGCWC	2 cut(s)	1264, 1666
Alw26I	GTCTC	4 cut(s)	110, 625, 1379, 1440
AlwI	GGATC	6 cut(s)	245, 258, 455, 789, 802, 1508
AoxI	GGCC	3 cut(s)	664, 1213, 1523
ApeKI	GCWGC	1 cut(s)	47
ApoI	RAATTY	6 cut(s)	476, 837, 1405, 1470, 1542, 1752
ArsI	GACNNNNNNTTYG	2 cut(s)	1462, 1494
AseI	ATTAAT	2 cut(s)	200, 1590
Asp700I	GAANNNNTTC	2 cut(s)	1230, 1787
AspLEI	GCGC	2 cut(s)	380, 1830
AspS9I	GGNCC	3 cut(s)	1088, 1478, 1523
AsuHPI	GGTGA	2 cut(s)	578, 1401
AsuII	TTCGAA	1 cut(s)	757
AsuNHI	GCTAGC	1 cut(s)	1579
AvaII	GGWCC	2 cut(s)	1088, 1478
AxyI	CCTNAGG	1 cut(s)	777
BamHI	GGATCC	2 cut(s)	250, 794
BanII	GRGCYC	2 cut(s)	1264, 1770
BbsI	GAAGAC	1 cut(s)	1031
Bbv12I	GWGCWC	2 cut(s)	1264, 1666
BbvI	GCAGC	1 cut(s)	34
BccI	CCATC	7 cut(s)	127, 484, 556, 752, 772, 779, 1238
BceAI	ACGGC	2 cut(s)	1200, 1795
BcgI	CGANNNNNNTGC	2 cut(s)	1820, 1854
BciT130I	CCWGG	2 cut(s)	1241, 1476
BciVI	GTATCC	1 cut(s)	175
BclI	TGATCA	3 cut(s)	1159, 1174, 1489
BcoDI	GTCTC	4 cut(s)	110, 625, 1379, 1440
BfaI	CTAG	6 cut(s)	53, 768, 1269, 1485, 1580, 1667
BfuI	GTATCC	1 cut(s)	175
BisI	GCNGC	1 cut(s)	48
BlsI	GCNGC	1 cut(s)	49
BmcAI	AGTACT	3 cut(s)	673, 712, 772
Bme1390I	CCNGG	2 cut(s)	1241, 1476
Bme18I	GGWCC	2 cut(s)	1088, 1478
BmeRI	GACNNNNNGTC	1 cut(s)	1804
BmgT120I	GGNCC	3 cut(s)	1088, 1478, 1523
BmiI	GGNNCC	5 cut(s)	252, 796, 979, 1090, 1447
BmrFI	CCNGG	2 cut(s)	1241, 1476
BmrI	ACTGGG	1 cut(s)	1747
BmsI	GCATC	2 cut(s)	1066, 1155
BmtI	GCTAGC	1 cut(s)	1583
BmuI	ACTGGG	1 cut(s)	1747
BpiI	GAAGAC	1 cut(s)	1031
BplI	GAGNNNNNCTC	2 cut(s)	605, 637
Bpu14I	TTCGAA	1 cut(s)	757
BpuEI	CTTGAG	1 cut(s)	922
Bsa29I	ATCGAT	1 cut(s)	1074
BsaAI	YACGTR	1 cut(s)	611
BsaBI	GATNNNNATC	1 cut(s)	793
BsaI	GGTCTC	1 cut(s)	110
BsaJI	CCNNGG	4 cut(s)	99, 624, 862, 1119
BsaWI	WCCGGW	1 cut(s)	1803
BsaXI	ACNNNNNCTCC	2 cut(s)	688, 718
Bsc4I	CCNNNNNNNGG	3 cut(s)	126, 382, 1532
Bse1I	ACTGG	1 cut(s)	1742
Bse21I	CCTNAGG	1 cut(s)	777
Bse3DI	GCAATG	1 cut(s)	969
Bse8I	GATNNNNATC	1 cut(s)	793
BseBI	CCWGG	2 cut(s)	1241, 1476
BseCI	ATCGAT	1 cut(s)	1074
BseDI	CCNNGG	4 cut(s)	99, 624, 862, 1119
BseGI	GGATG	1 cut(s)	1249
BseJI	GATNNNNATC	1 cut(s)	793
BseLI	CCNNNNNNNGG	3 cut(s)	126, 382, 1532
BseMI	GCAATG	1 cut(s)	969
BseMII	CTCAG	3 cut(s)	99, 409, 1598
BseNI	ACTGG	1 cut(s)	1742
BseXI	GCAGC	1 cut(s)	34
Bsh1236I	CGCG	3 cut(s)	378, 1828, 1830
Bsh1285I	CGRYCG	1 cut(s)	1808
BshFI	GGCC	3 cut(s)	666, 1215, 1525
BshVI	ATCGAT	1 cut(s)	1074
BsiEI	CGRYCG	1 cut(s)	1808
BsiHKAI	GWGCWC	2 cut(s)	1264, 1666
BsiSI	CCGG	1 cut(s)	1804
BslFI	GGGAC	2 cut(s)	375, 700
BslI	CCNNNNNNNGG	3 cut(s)	126, 382, 1532
BsmAI	GTCTC	4 cut(s)	110, 625, 1379, 1440
BsmFI	GGGAC	2 cut(s)	375, 700
BsmI	GAATGC	1 cut(s)	726
BsnI	GGCC	3 cut(s)	666, 1215, 1525
Bso31I	GGTCTC	1 cut(s)	110
Bsp119I	TTCGAA	1 cut(s)	757
Bsp1286I	GDGCHC	3 cut(s)	1264, 1666, 1770
Bsp143I	GATC	9 cut(s)	250, 460, 794, 1071, 1159, 1174, 1489, 1513, 1815
BspACI	CCGC	4 cut(s)	281, 376, 1573, 1826
BspANI	GGCC	3 cut(s)	666, 1215, 1525
BspCNI	CTCAG	3 cut(s)	100, 408, 1597
BspDI	ATCGAT	1 cut(s)	1074
BspFNI	CGCG	3 cut(s)	378, 1828, 1830
BspHI	TCATGA	1 cut(s)	1162
BspLI	GGNNCC	5 cut(s)	252, 796, 979, 1090, 1447
BspOI	GCTAGC	1 cut(s)	1583
BspPI	GGATC	6 cut(s)	245, 258, 455, 789, 802, 1508
BspT104I	TTCGAA	1 cut(s)	757
BspTNI	GGTCTC	1 cut(s)	110
BsrDI	GCAATG	1 cut(s)	969
BsrI	ACTGG	1 cut(s)	1742
BssECI	CCNNGG	4 cut(s)	99, 624, 862, 1119
BssMI	GATC	9 cut(s)	250, 460, 794, 1071, 1159, 1174, 1489, 1513, 1815
BssT1I	CCWWGG	3 cut(s)	99, 624, 862
Bst2UI	CCWGG	2 cut(s)	1241, 1476
Bst4CI	ACNGT	8 cut(s)	343, 373, 607, 691, 1211, 1615, 1661, 1852
Bst6I	CTCTTC	2 cut(s)	819, 1630
BstBAI	YACGTR	1 cut(s)	611
BstBI	TTCGAA	1 cut(s)	757
BstC8I	GCNNGC	7 cut(s)	285, 923, 1506, 1510, 1577, 1581, 1770
BstDEI	CTNAG	5 cut(s)	108, 395, 668, 777, 1584
BstF5I	GGATG	1 cut(s)	1249
BstFNI	CGCG	3 cut(s)	378, 1828, 1830
BstHHI	GCGC	2 cut(s)	380, 1830
BstKTI	GATC	9 cut(s)	253, 463, 797, 1074, 1162, 1177, 1492, 1516, 1818
BstMAI	GTCTC	4 cut(s)	110, 625, 1379, 1440
BstMBI	GATC	9 cut(s)	250, 460, 794, 1071, 1159, 1174, 1489, 1513, 1815
BstMCI	CGRYCG	1 cut(s)	1808
BstMWI	GCNNNNNNNGC	1 cut(s)	1259
BstNI	CCWGG	2 cut(s)	1241, 1476
BstNSI	RCATGY	4 cut(s)	287, 582, 1009, 1508
BstSCI	CCNGG	2 cut(s)	1239, 1474
BstUI	CGCG	3 cut(s)	378, 1828, 1830
BstV1I	GCAGC	1 cut(s)	34
BstV2I	GAAGAC	1 cut(s)	1031
BstX2I	RGATCY	2 cut(s)	250, 794
BstYI	RGATCY	2 cut(s)	250, 794
Bsu15I	ATCGAT	1 cut(s)	1074
Bsu36I	CCTNAGG	1 cut(s)	777
BsuI	GTATCC	1 cut(s)	175
BsuRI	GGCC	3 cut(s)	666, 1215, 1525
BsuTUI	ATCGAT	1 cut(s)	1074
BtsCI	GGATG	1 cut(s)	1249
BtsIMutI	CAGTG	3 cut(s)	523, 1216, 1750
Cac8I	GCNNGC	7 cut(s)	285, 923, 1506, 1510, 1577, 1581, 1770
CciI	TCATGA	1 cut(s)	1162
CfoI	GCGC	2 cut(s)	380, 1830
Cfr13I	GGNCC	3 cut(s)	1088, 1478, 1523
ClaI	ATCGAT	1 cut(s)	1074
CseI	GACGC	3 cut(s)	538, 1210, 1242
Csp6I	GTAC	6 cut(s)	189, 608, 672, 711, 771, 1047
CviQI	GTAC	6 cut(s)	189, 608, 672, 711, 771, 1047
DdeI	CTNAG	5 cut(s)	108, 395, 668, 777, 1584
DpnI	GATC	9 cut(s)	252, 462, 796, 1073, 1161, 1176, 1491, 1515, 1817
DpnII	GATC	9 cut(s)	250, 460, 794, 1071, 1159, 1174, 1489, 1513, 1815
DraI	TTTAAA	1 cut(s)	225
DriI	GACNNNNNGTC	1 cut(s)	1804
EaeI	YGGCCR	1 cut(s)	1213
Eam1104I	CTCTTC	2 cut(s)	819, 1630
Eam1105I	GACNNNNNGTC	1 cut(s)	1804
EarI	CTCTTC	2 cut(s)	819, 1630
Ecl136II	GAGCTC	1 cut(s)	1262
Eco130I	CCWWGG	3 cut(s)	99, 624, 862
Eco24I	GRGCYC	2 cut(s)	1264, 1770
Eco31I	GGTCTC	1 cut(s)	110
Eco47I	GGWCC	2 cut(s)	1088, 1478
Eco53kI	GAGCTC	1 cut(s)	1262
Eco81I	CCTNAGG	1 cut(s)	777
EcoICRI	GAGCTC	1 cut(s)	1262
EcoO109I	RGGNCCY	1 cut(s)	1478
EcoRII	CCWGG	2 cut(s)	1239, 1474
EcoT14I	CCWWGG	3 cut(s)	99, 624, 862
EcoT38I	GRGCYC	2 cut(s)	1264, 1770
ErhI	CCWWGG	3 cut(s)	99, 624, 862
FaqI	GGGAC	2 cut(s)	375, 700
FbaI	TGATCA	3 cut(s)	1159, 1174, 1489
FblI	GTMKAC	2 cut(s)	304, 1734
Fnu4HI	GCNGC	1 cut(s)	48
FokI	GGATG	1 cut(s)	1256
FriOI	GRGCYC	2 cut(s)	1264, 1770
Fsp4HI	GCNGC	1 cut(s)	48
FspBI	CTAG	6 cut(s)	53, 768, 1269, 1485, 1580, 1667
GlaI	GCGC	2 cut(s)	379, 1829
GluI	GCNGC	1 cut(s)	48
HaeIII	GGCC	3 cut(s)	666, 1215, 1525
HapII	CCGG	1 cut(s)	1804
HgaI	GACGC	3 cut(s)	538, 1210, 1242
HhaI	GCGC	2 cut(s)	380, 1830
Hin6I	GCGC	2 cut(s)	378, 1828
HinP1I	GCGC	2 cut(s)	378, 1828
HincII	GTYRAC	2 cut(s)	1648, 1735
HindII	GTYRAC	2 cut(s)	1648, 1735
HindIII	AAGCTT	2 cut(s)	923, 1786
HinfI	GANTC	4 cut(s)	60, 1036, 1420, 1689
HpaII	CCGG	1 cut(s)	1804
HphI	GGTGA	2 cut(s)	578, 1401
Hpy166II	GTNNAC	7 cut(s)	305, 351, 553, 646, 1648, 1657, 1735
Hpy188I	TCNGA	7 cut(s)	59, 109, 358, 679, 708, 1518, 1587
Hpy188III	TCNNGA	6 cut(s)	179, 748, 1163, 1178, 1257, 1458
Hpy8I	GTNNAC	7 cut(s)	305, 351, 553, 646, 1648, 1657, 1735
Hpy99I	CGWCG	2 cut(s)	358, 1816
HpyAV	CCTTC	1 cut(s)	567
HpyCH4III	ACNGT	8 cut(s)	343, 373, 607, 691, 1211, 1615, 1661, 1852
HpyCH4IV	ACGT	3 cut(s)	353, 610, 1185
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1259
HpyF3I	CTNAG	5 cut(s)	108, 395, 668, 777, 1584
HpySE526I	ACGT	3 cut(s)	353, 610, 1185
HspAI	GCGC	2 cut(s)	378, 1828
Ksp22I	TGATCA	3 cut(s)	1159, 1174, 1489
Kzo9I	GATC	9 cut(s)	250, 460, 794, 1071, 1159, 1174, 1489, 1513, 1815
LmnI	GCTCC	3 cut(s)	1014, 1451, 1618
Lsp1109I	GCAGC	1 cut(s)	34
LweI	GCATC	2 cut(s)	1066, 1155
MaeI	CTAG	6 cut(s)	53, 768, 1269, 1485, 1580, 1667
MaeII	ACGT	3 cut(s)	353, 610, 1185
MaeIII	GTNAC	4 cut(s)	367, 691, 1114, 1846
MalI	GATC	9 cut(s)	252, 462, 796, 1073, 1161, 1176, 1491, 1515, 1817
MboI	GATC	9 cut(s)	250, 460, 794, 1071, 1159, 1174, 1489, 1513, 1815
MboII	GAAGA	5 cut(s)	459, 836, 1031, 1042, 1647
MfeI	CAATTG	1 cut(s)	1842
MflI	RGATCY	2 cut(s)	250, 794
MhlI	GDGCHC	3 cut(s)	1264, 1666, 1770
MlyI	GAGTC	2 cut(s)	1045, 1414
MmeI	TCCRAC	4 cut(s)	37, 93, 228, 336
MroXI	GAANNNNTTC	2 cut(s)	1230, 1787
MslI	CAYNNNNRTG	2 cut(s)	239, 1242
MspA1I	CMGCKG	1 cut(s)	1085
MspI	CCGG	1 cut(s)	1804
MspR9I	CCNGG	2 cut(s)	1241, 1476
MunI	CAATTG	1 cut(s)	1842
Mva1269I	GAATGC	1 cut(s)	726
MvaI	CCWGG	2 cut(s)	1241, 1476
MvnI	CGCG	3 cut(s)	378, 1828, 1830
MwoI	GCNNNNNNNGC	1 cut(s)	1259
NdeII	GATC	9 cut(s)	250, 460, 794, 1071, 1159, 1174, 1489, 1513, 1815
NheI	GCTAGC	1 cut(s)	1579
NlaIV	GGNNCC	5 cut(s)	252, 796, 979, 1090, 1447
NmuCI	GTSAC	2 cut(s)	367, 1114
NspI	RCATGY	4 cut(s)	287, 582, 1009, 1508
NspV	TTCGAA	1 cut(s)	757
PaeI	GCATGC	2 cut(s)	287, 1508
PagI	TCATGA	1 cut(s)	1162
PctI	GAATGC	1 cut(s)	726
PdmI	GAANNNNTTC	2 cut(s)	1230, 1787
PfeI	GAWTC	2 cut(s)	60, 1689
PflFI	GACNNNGTC	1 cut(s)	1739
PkrI	GCNGC	1 cut(s)	49
PleI	GAGTC	2 cut(s)	1044, 1414
PpsI	GAGTC	2 cut(s)	1044, 1414
Ppu21I	YACGTR	1 cut(s)	611
PpuMI	RGGWCCY	1 cut(s)	1478
PshBI	ATTAAT	2 cut(s)	200, 1590
Psp124BI	GAGCTC	1 cut(s)	1264
Psp5II	RGGWCCY	1 cut(s)	1478
Psp6I	CCWGG	2 cut(s)	1239, 1474
PspGI	CCWGG	2 cut(s)	1239, 1474
PspN4I	GGNNCC	5 cut(s)	252, 796, 979, 1090, 1447
PspPI	GGNCC	3 cut(s)	1088, 1478, 1523
PspPPI	RGGWCCY	1 cut(s)	1478
PsuI	RGATCY	2 cut(s)	250, 794
PsyI	GACNNNGTC	1 cut(s)	1739
PvuII	CAGCTG	1 cut(s)	1085
RsaI	GTAC	6 cut(s)	190, 609, 673, 712, 772, 1048
RsaNI	GTAC	6 cut(s)	189, 608, 672, 711, 771, 1047
RseI	CAYNNNNRTG	2 cut(s)	239, 1242
SacI	GAGCTC	1 cut(s)	1264
SalI	GTCGAC	1 cut(s)	1733
SatI	GCNGC	1 cut(s)	48
Sau3AI	GATC	9 cut(s)	250, 460, 794, 1071, 1159, 1174, 1489, 1513, 1815
Sau96I	GGNCC	3 cut(s)	1088, 1478, 1523
ScaI	AGTACT	3 cut(s)	673, 712, 772
SchI	GAGTC	2 cut(s)	1045, 1414
ScrFI	CCNGG	2 cut(s)	1241, 1476
SduI	GDGCHC	3 cut(s)	1264, 1666, 1770
SfaNI	GCATC	2 cut(s)	1066, 1155
SfuI	TTCGAA	1 cut(s)	757
SinI	GGWCC	2 cut(s)	1088, 1478
SmiMI	CAYNNNNRTG	2 cut(s)	239, 1242
SmlI	CTYRAG	1 cut(s)	901
SmoI	CTYRAG	1 cut(s)	901
SphI	GCATGC	2 cut(s)	287, 1508
SsiI	CCGC	4 cut(s)	281, 376, 1573, 1826
SspI	AATATT	1 cut(s)	1363
SspMI	CTAG	6 cut(s)	53, 768, 1269, 1485, 1580, 1667
SstI	GAGCTC	1 cut(s)	1264
StyD4I	CCNGG	2 cut(s)	1239, 1474
StyI	CCWWGG	3 cut(s)	99, 624, 862
TaaI	ACNGT	8 cut(s)	343, 373, 607, 691, 1211, 1615, 1661, 1852
TaiI	ACGT	3 cut(s)	356, 613, 1188
TaqI	TCGA	7 cut(s)	387, 757, 1074, 1149, 1692, 1734, 1814
TaqII	GACCGA	1 cut(s)	1133
TatI	WGTACW	3 cut(s)	671, 710, 770
TfiI	GAWTC	2 cut(s)	60, 1689
TscAI	CASTG	3 cut(s)	523, 1216, 1750
TseFI	GTSAC	2 cut(s)	367, 1114
TseI	GCWGC	1 cut(s)	47
Tsp45I	GTSAC	2 cut(s)	367, 1114
TspDTI	ATGAA	5 cut(s)	17, 105, 467, 837, 841
TspGWI	ACGGA	1 cut(s)	549
TspRI	CASTG	3 cut(s)	523, 1216, 1750
Tth111I	GACNNNGTC	1 cut(s)	1739
VpaK11BI	GGWCC	2 cut(s)	1088, 1478
VspI	ATTAAT	2 cut(s)	200, 1590
XapI	RAATTY	6 cut(s)	476, 837, 1405, 1470, 1542, 1752
XceI	RCATGY	4 cut(s)	287, 582, 1009, 1508
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1361
XmiI	GTMKAC	2 cut(s)	304, 1734
XmnI	GAANNNNTTC	2 cut(s)	1230, 1787
XspI	CTAG	6 cut(s)	53, 768, 1269, 1485, 1580, 1667
ZrmI	AGTACT	3 cut(s)	673, 712, 772

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.