Encoded by
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 1390 |
| AciI | CCGC | 4 cut(s) | 202, 472, 566, 1381 |
| AclWI | GGATC | 4 cut(s) | 171, 1176, 1575, 1680 |
| AcoI | YGGCCR | 1 cut(s) | 462 |
| AcsI | RAATTY | 6 cut(s) | 26, 100, 168, 1535, 1552, 1627 |
| AcuI | CTGAAG | 2 cut(s) | 980, 1188 |
| AfaI | GTAC | 5 cut(s) | 48, 607, 736, 1596, 1643 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 64, 471 |
| AflIII | ACRYGT | 1 cut(s) | 1591 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1456 |
| AjnI | CCWGG | 1 cut(s) | 1164 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 189, 221, 1514, 1546 |
| Alw21I | GWGCWC | 2 cut(s) | 1019, 1311 |
| Alw26I | GTCTC | 6 cut(s) | 224, 1187, 1464, 1676, 1718, 1818 |
| AlwI | GGATC | 4 cut(s) | 171, 1176, 1575, 1680 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1685 |
| Ama87I | CYCGRG | 1 cut(s) | 1612 |
| AoxI | GGCC | 4 cut(s) | 427, 462, 563, 1327 |
| ApeKI | GCWGC | 2 cut(s) | 112, 1467 |
| ApoI | RAATTY | 6 cut(s) | 26, 100, 168, 1535, 1552, 1627 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 401, 433 |
| AspS9I | GGNCC | 1 cut(s) | 896 |
| AsuHPI | GGTGA | 6 cut(s) | 98, 373, 599, 647, 734, 1364 |
| AvaI | CYCGRG | 1 cut(s) | 1612 |
| AvaII | GGWCC | 1 cut(s) | 896 |
| AxyI | CCTNAGG | 1 cut(s) | 357 |
| BalI | TGGCCA | 1 cut(s) | 464 |
| BanII | GRGCYC | 1 cut(s) | 1019 |
| BbsI | GAAGAC | 1 cut(s) | 623 |
| Bbv12I | GWGCWC | 2 cut(s) | 1019, 1311 |
| BbvI | GCAGC | 2 cut(s) | 124, 1454 |
| BccI | CCATC | 3 cut(s) | 128, 1690, 1814 |
| BciT130I | CCWGG | 1 cut(s) | 1166 |
| BclI | TGATCA | 1 cut(s) | 126 |
| BcoDI | GTCTC | 6 cut(s) | 224, 1187, 1464, 1676, 1718, 1818 |
| BfaI | CTAG | 3 cut(s) | 425, 1023, 1262 |
| BfmI | CTRYAG | 5 cut(s) | 69, 431, 1342, 1416, 1772 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 207, 782 |
| BglII | AGATCT | 1 cut(s) | 642 |
| BisI | GCNGC | 5 cut(s) | 113, 202, 566, 1382, 1468 |
| BlpI | GCTNAGC | 1 cut(s) | 786 |
| BlsI | GCNGC | 5 cut(s) | 114, 203, 567, 1383, 1469 |
| Bme1390I | CCNGG | 1 cut(s) | 1166 |
| Bme18I | GGWCC | 1 cut(s) | 896 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1456 |
| BmeT110I | CYCGRG | 1 cut(s) | 1612 |
| BmgT120I | GGNCC | 1 cut(s) | 896 |
| BmiI | GGNNCC | 2 cut(s) | 372, 1527 |
| BmrFI | CCNGG | 1 cut(s) | 1166 |
| BmrI | ACTGGG | 1 cut(s) | 1076 |
| BmsI | GCATC | 4 cut(s) | 300, 322, 707, 810 |
| BmuI | ACTGGG | 1 cut(s) | 1076 |
| BpiI | GAAGAC | 1 cut(s) | 623 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1277, 1309 |
| BpmI | CTGGAG | 1 cut(s) | 333 |
| Bpu10I | CCTNAGC | 1 cut(s) | 772 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 786 |
| BpuEI | CTTGAG | 3 cut(s) | 512, 867, 1361 |
| BsaI | GGTCTC | 1 cut(s) | 224 |
| BsaJI | CCNNGG | 7 cut(s) | 63, 205, 396, 459, 746, 1613, 1745 |
| BsaWI | WCCGGW | 1 cut(s) | 373 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 1815 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 64, 471 |
| Bse118I | RCCGGY | 1 cut(s) | 776 |
| Bse1I | ACTGG | 2 cut(s) | 581, 1071 |
| Bse21I | CCTNAGG | 1 cut(s) | 357 |
| Bse3DI | GCAATG | 1 cut(s) | 1196 |
| BseBI | CCWGG | 1 cut(s) | 1166 |
| BseDI | CCNNGG | 7 cut(s) | 63, 205, 396, 459, 746, 1613, 1745 |
| BseGI | GGATG | 5 cut(s) | 8, 315, 707, 825, 1701 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 64, 471 |
| BseMI | GCAATG | 1 cut(s) | 1196 |
| BseMII | CTCAG | 5 cut(s) | 219, 371, 1088, 1163, 1399 |
| BseNI | ACTGG | 2 cut(s) | 581, 1071 |
| BseXI | GCAGC | 2 cut(s) | 124, 1454 |
| BshFI | GGCC | 4 cut(s) | 429, 464, 565, 1329 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1019, 1311 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1612 |
| BsiSI | CCGG | 2 cut(s) | 374, 777 |
| BslFI | GGGAC | 1 cut(s) | 1084 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 64, 471 |
| BsmAI | GTCTC | 6 cut(s) | 224, 1187, 1464, 1676, 1718, 1818 |
| BsmBI | CGTCTC | 2 cut(s) | 1464, 1718 |
| BsmFI | GGGAC | 1 cut(s) | 1084 |
| BsnI | GGCC | 4 cut(s) | 429, 464, 565, 1329 |
| Bso31I | GGTCTC | 1 cut(s) | 224 |
| BsoBI | CYCGRG | 1 cut(s) | 1612 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1019, 1311 |
| Bsp1407I | TGTACA | 2 cut(s) | 734, 1641 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 786 |
| Bsp19I | CCATGG | 1 cut(s) | 459 |
| BspACI | CCGC | 4 cut(s) | 202, 472, 566, 1381 |
| BspANI | GGCC | 4 cut(s) | 429, 464, 565, 1329 |
| BspCNI | CTCAG | 5 cut(s) | 220, 370, 1087, 1164, 1398 |
| BspHI | TCATGA | 1 cut(s) | 1795 |
| BspLI | GGNNCC | 2 cut(s) | 372, 1527 |
| BspMAI | CTGCAG | 3 cut(s) | 435, 1346, 1776 |
| BspPI | GGATC | 4 cut(s) | 171, 1176, 1575, 1680 |
| BspQI | GCTCTTC | 1 cut(s) | 797 |
| BspTNI | GGTCTC | 1 cut(s) | 224 |
| BsrDI | GCAATG | 1 cut(s) | 1196 |
| BsrFI | RCCGGY | 1 cut(s) | 776 |
| BsrGI | TGTACA | 2 cut(s) | 734, 1641 |
| BsrI | ACTGG | 2 cut(s) | 581, 1071 |
| BssAI | RCCGGY | 1 cut(s) | 776 |
| BssECI | CCNNGG | 7 cut(s) | 63, 205, 396, 459, 746, 1613, 1745 |
| BssNAI | GTATAC | 1 cut(s) | 1391 |
| BssT1I | CCWWGG | 5 cut(s) | 63, 205, 396, 459, 746 |
| Bst1107I | GTATAC | 1 cut(s) | 1391 |
| Bst2UI | CCWGG | 1 cut(s) | 1166 |
| Bst4CI | ACNGT | 6 cut(s) | 247, 306, 452, 924, 1008, 1602 |
| Bst6I | CTCTTC | 7 cut(s) | 554, 621, 633, 797, 1300, 1425, 1467 |
| BstAUI | TGTACA | 2 cut(s) | 734, 1641 |
| BstC8I | GCNNGC | 8 cut(s) | 431, 518, 761, 778, 852, 856, 1271, 1342 |
| BstDSI | CCRYGG | 1 cut(s) | 459 |
| BstF5I | GGATG | 5 cut(s) | 8, 315, 707, 825, 1701 |
| BstMAI | GTCTC | 6 cut(s) | 224, 1187, 1464, 1676, 1718, 1818 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 207, 782 |
| BstNI | CCWGG | 1 cut(s) | 1166 |
| BstNSI | RCATGY | 5 cut(s) | 763, 854, 858, 1182, 1273 |
| BstSCI | CCNGG | 1 cut(s) | 1164 |
| BstSFI | CTRYAG | 5 cut(s) | 69, 431, 1342, 1416, 1772 |
| BstV1I | GCAGC | 2 cut(s) | 124, 1454 |
| BstV2I | GAAGAC | 1 cut(s) | 623 |
| BstX2I | RGATCY | 3 cut(s) | 642, 1168, 1567 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 43 |
| BstYI | RGATCY | 3 cut(s) | 642, 1168, 1567 |
| BstZ17I | GTATAC | 1 cut(s) | 1391 |
| Bsu36I | CCTNAGG | 1 cut(s) | 357 |
| BsuRI | GGCC | 4 cut(s) | 429, 464, 565, 1329 |
| BtgI | CCRYGG | 1 cut(s) | 459 |
| BtsCI | GGATG | 5 cut(s) | 8, 315, 707, 825, 1701 |
| BtsIMutI | CAGTG | 6 cut(s) | 129, 243, 311, 729, 920, 1607 |
| Cac8I | GCNNGC | 8 cut(s) | 431, 518, 761, 778, 852, 856, 1271, 1342 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1685 |
| CciI | TCATGA | 1 cut(s) | 1795 |
| Cfr10I | RCCGGY | 1 cut(s) | 776 |
| Cfr13I | GGNCC | 1 cut(s) | 896 |
| CseI | GACGC | 1 cut(s) | 1700 |
| Csp6I | GTAC | 5 cut(s) | 47, 606, 735, 1595, 1642 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1536, 1571, 1587, 1622 |
| CviAII | CATG | 8 cut(s) | 460, 760, 851, 855, 1179, 1270, 1396, 1796 |
| CviQI | GTAC | 5 cut(s) | 47, 606, 735, 1595, 1642 |
| DraI | TTTAAA | 3 cut(s) | 105, 693, 1632 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1456 |
| EaeI | YGGCCR | 1 cut(s) | 462 |
| Eam1104I | CTCTTC | 7 cut(s) | 554, 621, 633, 797, 1300, 1425, 1467 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1456 |
| EarI | CTCTTC | 7 cut(s) | 554, 621, 633, 797, 1300, 1425, 1467 |
| Ecl136II | GAGCTC | 1 cut(s) | 1017 |
| Eco130I | CCWWGG | 5 cut(s) | 63, 205, 396, 459, 746 |
| Eco147I | AGGCCT | 1 cut(s) | 429 |
| Eco24I | GRGCYC | 1 cut(s) | 1019 |
| Eco31I | GGTCTC | 1 cut(s) | 224 |
| Eco32I | GATATC | 1 cut(s) | 1210 |
| Eco47I | GGWCC | 1 cut(s) | 896 |
| Eco53kI | GAGCTC | 1 cut(s) | 1017 |
| Eco57I | CTGAAG | 2 cut(s) | 980, 1188 |
| Eco81I | CCTNAGG | 1 cut(s) | 357 |
| Eco88I | CYCGRG | 1 cut(s) | 1612 |
| EcoICRI | GAGCTC | 1 cut(s) | 1017 |
| EcoRII | CCWGG | 1 cut(s) | 1164 |
| EcoRV | GATATC | 1 cut(s) | 1210 |
| EcoT14I | CCWWGG | 5 cut(s) | 63, 205, 396, 459, 746 |
| EcoT22I | ATGCAT | 2 cut(s) | 315, 856 |
| EcoT38I | GRGCYC | 1 cut(s) | 1019 |
| ErhI | CCWWGG | 5 cut(s) | 63, 205, 396, 459, 746 |
| Esp3I | CGTCTC | 2 cut(s) | 1464, 1718 |
| FaeI | CATG | 8 cut(s) | 463, 763, 854, 858, 1182, 1273, 1399, 1799 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 500, 532, 808, 840 |
| FaqI | GGGAC | 1 cut(s) | 1084 |
| FatI | CATG | 8 cut(s) | 459, 759, 850, 854, 1178, 1269, 1395, 1795 |
| FauNDI | CATATG | 1 cut(s) | 481 |
| FbaI | TGATCA | 1 cut(s) | 126 |
| FblI | GTMKAC | 1 cut(s) | 1390 |
| Fnu4HI | GCNGC | 5 cut(s) | 113, 202, 566, 1382, 1468 |
| FokI | GGATG | 4 cut(s) | 322, 694, 832, 1708 |
| FriOI | GRGCYC | 1 cut(s) | 1019 |
| Fsp4HI | GCNGC | 5 cut(s) | 113, 202, 566, 1382, 1468 |
| FspBI | CTAG | 3 cut(s) | 425, 1023, 1262 |
| GluI | GCNGC | 5 cut(s) | 113, 202, 566, 1382, 1468 |
| GsuI | CTGGAG | 1 cut(s) | 333 |
| HaeIII | GGCC | 4 cut(s) | 429, 464, 565, 1329 |
| HapII | CCGG | 2 cut(s) | 374, 777 |
| HgaI | GACGC | 1 cut(s) | 1700 |
| Hin1II | CATG | 8 cut(s) | 463, 763, 854, 858, 1182, 1273, 1399, 1799 |
| HinfI | GANTC | 6 cut(s) | 272, 751, 803, 833, 1072, 1347 |
| HpaII | CCGG | 2 cut(s) | 374, 777 |
| HphI | GGTGA | 6 cut(s) | 98, 373, 599, 647, 734, 1364 |
| Hpy166II | GTNNAC | 3 cut(s) | 89, 1391, 1595 |
| Hpy188I | TCNGA | 5 cut(s) | 602, 1077, 1173, 1207, 1249 |
| Hpy8I | GTNNAC | 3 cut(s) | 89, 1391, 1595 |
| Hpy99I | CGWCG | 1 cut(s) | 759 |
| HpyCH4III | ACNGT | 6 cut(s) | 247, 306, 452, 924, 1008, 1602 |
| HpyCH4IV | ACGT | 1 cut(s) | 1591 |
| HpyCH4V | TGCA | 6 cut(s) | 313, 433, 854, 940, 1344, 1774 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 207, 782 |
| HpySE526I | ACGT | 1 cut(s) | 1591 |
| Hsp92II | CATG | 8 cut(s) | 463, 763, 854, 858, 1182, 1273, 1399, 1799 |
| KroI | GCCGGC | 1 cut(s) | 776 |
| KroNI | GCCGGC | 1 cut(s) | 778 |
| Ksp22I | TGATCA | 1 cut(s) | 126 |
| LguI | GCTCTTC | 1 cut(s) | 797 |
| LmnI | GCTCC | 1 cut(s) | 224 |
| Lsp1109I | GCAGC | 2 cut(s) | 124, 1454 |
| LweI | GCATC | 4 cut(s) | 300, 322, 707, 810 |
| MaeI | CTAG | 3 cut(s) | 425, 1023, 1262 |
| MaeII | ACGT | 1 cut(s) | 1591 |
| MaeIII | GTNAC | 3 cut(s) | 417, 1181, 1253 |
| MfeI | CAATTG | 1 cut(s) | 503 |
| MflI | RGATCY | 3 cut(s) | 642, 1168, 1567 |
| MhlI | GDGCHC | 2 cut(s) | 1019, 1311 |
| MlsI | TGGCCA | 1 cut(s) | 464 |
| MluNI | TGGCCA | 1 cut(s) | 464 |
| MlyI | GAGTC | 2 cut(s) | 1066, 1341 |
| MmeI | TCCRAC | 1 cut(s) | 366 |
| Mox20I | TGGCCA | 1 cut(s) | 464 |
| Mph1103I | ATGCAT | 2 cut(s) | 315, 856 |
| MroNI | GCCGGC | 1 cut(s) | 776 |
| MscI | TGGCCA | 1 cut(s) | 464 |
| MseI | TTAA | 7 cut(s) | 104, 326, 692, 1085, 1143, 1505, 1631 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1037, 1583 |
| Msp20I | TGGCCA | 1 cut(s) | 464 |
| MspI | CCGG | 2 cut(s) | 374, 777 |
| MspR9I | CCNGG | 1 cut(s) | 1166 |
| MunI | CAATTG | 1 cut(s) | 503 |
| MvaI | CCWGG | 1 cut(s) | 1166 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 207, 782 |
| NaeI | GCCGGC | 1 cut(s) | 778 |
| NcoI | CCATGG | 1 cut(s) | 459 |
| NdeI | CATATG | 1 cut(s) | 481 |
| NgoMIV | GCCGGC | 1 cut(s) | 776 |
| NlaIII | CATG | 8 cut(s) | 463, 763, 854, 858, 1182, 1273, 1399, 1799 |
| NlaIV | GGNNCC | 2 cut(s) | 372, 1527 |
| NmeAIII | GCCGAG | 2 cut(s) | 998, 1770 |
| NmuCI | GTSAC | 2 cut(s) | 417, 1181 |
| NsiI | ATGCAT | 2 cut(s) | 315, 856 |
| NspI | RCATGY | 5 cut(s) | 763, 854, 858, 1182, 1273 |
| PaeI | GCATGC | 4 cut(s) | 763, 854, 858, 1273 |
| PagI | TCATGA | 1 cut(s) | 1795 |
| PceI | AGGCCT | 1 cut(s) | 429 |
| PciSI | GCTCTTC | 1 cut(s) | 797 |
| PdiI | GCCGGC | 1 cut(s) | 778 |
| PfeI | GAWTC | 4 cut(s) | 272, 751, 803, 833 |
| PfoI | TCCNGGA | 1 cut(s) | 1164 |
| PkrI | GCNGC | 5 cut(s) | 114, 203, 567, 1383, 1469 |
| PleI | GAGTC | 2 cut(s) | 1066, 1341 |
| PpsI | GAGTC | 2 cut(s) | 1066, 1341 |
| Psp124BI | GAGCTC | 1 cut(s) | 1019 |
| Psp6I | CCWGG | 1 cut(s) | 1164 |
| PspGI | CCWGG | 1 cut(s) | 1164 |
| PspN4I | GGNNCC | 2 cut(s) | 372, 1527 |
| PspPI | GGNCC | 1 cut(s) | 896 |
| PstI | CTGCAG | 3 cut(s) | 435, 1346, 1776 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1685 |
| PsuI | RGATCY | 3 cut(s) | 642, 1168, 1567 |
| RsaI | GTAC | 5 cut(s) | 48, 607, 736, 1596, 1643 |
| RsaNI | GTAC | 5 cut(s) | 47, 606, 735, 1595, 1642 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1037, 1583 |
| SacI | GAGCTC | 1 cut(s) | 1019 |
| SapI | GCTCTTC | 1 cut(s) | 797 |
| SaqAI | TTAA | 7 cut(s) | 104, 326, 692, 1085, 1143, 1505, 1631 |
| SatI | GCNGC | 5 cut(s) | 113, 202, 566, 1382, 1468 |
| Sau96I | GGNCC | 1 cut(s) | 896 |
| SbfI | CCTGCAGG | 1 cut(s) | 435 |
| SchI | GAGTC | 2 cut(s) | 1066, 1341 |
| ScrFI | CCNGG | 1 cut(s) | 1166 |
| SdaI | CCTGCAGG | 1 cut(s) | 435 |
| SduI | GDGCHC | 2 cut(s) | 1019, 1311 |
| SfaNI | GCATC | 4 cut(s) | 300, 322, 707, 810 |
| SfcI | CTRYAG | 5 cut(s) | 69, 431, 1342, 1416, 1772 |
| SinI | GGWCC | 1 cut(s) | 896 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1037, 1583 |
| SmlI | CTYRAG | 3 cut(s) | 491, 882, 1376 |
| SmoI | CTYRAG | 3 cut(s) | 491, 882, 1376 |
| SphI | GCATGC | 4 cut(s) | 763, 854, 858, 1273 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 435 |
| SseBI | AGGCCT | 1 cut(s) | 429 |
| SsiI | CCGC | 4 cut(s) | 202, 472, 566, 1381 |
| SspI | AATATT | 1 cut(s) | 679 |
| SspMI | CTAG | 3 cut(s) | 425, 1023, 1262 |
| SstI | GAGCTC | 1 cut(s) | 1019 |
| StuI | AGGCCT | 1 cut(s) | 429 |
| StyD4I | CCNGG | 1 cut(s) | 1164 |
| StyI | CCWWGG | 5 cut(s) | 63, 205, 396, 459, 746 |
| TaaI | ACNGT | 6 cut(s) | 247, 306, 452, 924, 1008, 1602 |
| TaiI | ACGT | 1 cut(s) | 1594 |
| TaqI | TCGA | 3 cut(s) | 839, 1102, 1791 |
| TatI | WGTACW | 2 cut(s) | 734, 1641 |
| TauI | GCSGC | 3 cut(s) | 204, 568, 1384 |
| TfiI | GAWTC | 4 cut(s) | 272, 751, 803, 833 |
| Tru1I | TTAA | 7 cut(s) | 104, 326, 692, 1085, 1143, 1505, 1631 |
| Tru9I | TTAA | 7 cut(s) | 104, 326, 692, 1085, 1143, 1505, 1631 |
| TscAI | CASTG | 6 cut(s) | 136, 250, 311, 729, 927, 1607 |
| TseFI | GTSAC | 2 cut(s) | 417, 1181 |
| TseI | GCWGC | 2 cut(s) | 112, 1467 |
| Tsp45I | GTSAC | 2 cut(s) | 417, 1181 |
| TspDTI | ATGAA | 7 cut(s) | 498, 586, 825, 968, 1062, 1530, 1704 |
| TspRI | CASTG | 6 cut(s) | 136, 250, 311, 729, 927, 1607 |
| VpaK11BI | GGWCC | 1 cut(s) | 896 |
| XapI | RAATTY | 6 cut(s) | 26, 100, 168, 1535, 1552, 1627 |
| XceI | RCATGY | 5 cut(s) | 763, 854, 858, 1182, 1273 |
| XmiI | GTMKAC | 1 cut(s) | 1390 |
| XspI | CTAG | 3 cut(s) | 425, 1023, 1262 |
| Zsp2I | ATGCAT | 2 cut(s) | 315, 856 |