Encoded by
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1607 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1405, 1492 |
| AccI | GTMKAC | 3 cut(s) | 323, 805, 1357 |
| AccII | CGCG | 1 cut(s) | 334 |
| AccIII | TCCGGA | 1 cut(s) | 609 |
| AciI | CCGC | 5 cut(s) | 178, 228, 241, 1348, 1508 |
| AclWI | GGATC | 5 cut(s) | 24, 876, 1536, 1641, 1785 |
| AcoI | YGGCCR | 4 cut(s) | 42, 723, 761, 853 |
| AcsI | RAATTY | 2 cut(s) | 1122, 1588 |
| AcuI | CTGAAG | 2 cut(s) | 606, 1398 |
| AfaI | GTAC | 4 cut(s) | 685, 784, 1557, 1820 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 862, 1405, 1492 |
| AflIII | ACRYGT | 1 cut(s) | 1552 |
| AjiI | CACGTC | 1 cut(s) | 809 |
| Alw26I | GTCTC | 6 cut(s) | 200, 584, 721, 1148, 1637, 1679 |
| AlwI | GGATC | 5 cut(s) | 24, 876, 1536, 1641, 1785 |
| Ama87I | CYCGRG | 2 cut(s) | 305, 625 |
| Aor13HI | TCCGGA | 1 cut(s) | 609 |
| AoxI | GGCC | 6 cut(s) | 42, 219, 524, 723, 761, 853 |
| ApeKI | GCWGC | 2 cut(s) | 289, 312 |
| ApoI | RAATTY | 2 cut(s) | 1122, 1588 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 158 |
| AspLEI | GCGC | 4 cut(s) | 177, 312, 336, 1740 |
| AspS9I | GGNCC | 1 cut(s) | 378 |
| AsuHPI | GGTGA | 8 cut(s) | 163, 217, 294, 360, 608, 961, 1167, 1331 |
| AvaI | CYCGRG | 2 cut(s) | 305, 625 |
| AvaII | GGWCC | 1 cut(s) | 378 |
| BaeGI | GKGCMC | 1 cut(s) | 203 |
| BalI | TGGCCA | 2 cut(s) | 725, 763 |
| BanII | GRGCYC | 1 cut(s) | 1033 |
| BauI | CACGAG | 1 cut(s) | 68 |
| BbsI | GAAGAC | 2 cut(s) | 1248, 1797 |
| BbvCI | CCTCAGC | 1 cut(s) | 1334 |
| BbvI | GCAGC | 2 cut(s) | 301, 324 |
| BccI | CCATC | 4 cut(s) | 79, 221, 230, 753 |
| BceAI | ACGGC | 2 cut(s) | 23, 757 |
| BcoDI | GTCTC | 6 cut(s) | 200, 584, 721, 1148, 1637, 1679 |
| BfaI | CTAG | 5 cut(s) | 284, 959, 1223, 1547, 1622 |
| BfmI | CTRYAG | 2 cut(s) | 666, 1309 |
| BfoI | RGCGCY | 1 cut(s) | 178 |
| BglII | AGATCT | 1 cut(s) | 338 |
| BisI | GCNGC | 4 cut(s) | 178, 290, 313, 1349 |
| BlpI | GCTNAGC | 1 cut(s) | 735 |
| BlsI | GCNGC | 4 cut(s) | 179, 291, 314, 1350 |
| Bme18I | GGWCC | 1 cut(s) | 378 |
| BmeT110I | CYCGRG | 2 cut(s) | 305, 625 |
| BmgBI | CACGTC | 1 cut(s) | 809 |
| BmgT120I | GGNCC | 1 cut(s) | 378 |
| BmrI | ACTGGG | 1 cut(s) | 145 |
| BmsI | GCATC | 6 cut(s) | 285, 700, 759, 994, 1348, 1548 |
| BmuI | ACTGGG | 1 cut(s) | 145 |
| BpiI | GAAGAC | 2 cut(s) | 1248, 1797 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 299, 331 |
| BpmI | CTGGAG | 1 cut(s) | 1149 |
| Bpu10I | CCTNAGC | 2 cut(s) | 926, 1334 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 735 |
| BpuEI | CTTGAG | 4 cut(s) | 119, 473, 1568, 1661 |
| Bsa29I | ATCGAT | 1 cut(s) | 1780 |
| BsaI | GGTCTC | 1 cut(s) | 721 |
| BsaJI | CCNNGG | 6 cut(s) | 39, 695, 720, 764, 1063, 1491 |
| BsaWI | WCCGGW | 1 cut(s) | 609 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 857, 887, 1147, 1177 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 862, 1405, 1492 |
| Bse1I | ACTGG | 4 cut(s) | 140, 157, 542, 1486 |
| Bse3DI | GCAATG | 1 cut(s) | 1236 |
| BseAI | TCCGGA | 1 cut(s) | 609 |
| BseCI | ATCGAT | 1 cut(s) | 1780 |
| BseDI | CCNNGG | 6 cut(s) | 39, 695, 720, 764, 1063, 1491 |
| BseGI | GGATG | 5 cut(s) | 277, 691, 774, 1539, 1726 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 862, 1405, 1492 |
| BseMI | GCAATG | 1 cut(s) | 1236 |
| BseMII | CTCAG | 9 cut(s) | 14, 195, 356, 831, 1046, 1124, 1325, 1366, 1638 |
| BseNI | ACTGG | 4 cut(s) | 140, 157, 542, 1486 |
| BseSI | GKGCMC | 1 cut(s) | 203 |
| BseXI | GCAGC | 2 cut(s) | 301, 324 |
| BsgI | GTGCAG | 1 cut(s) | 308 |
| Bsh1236I | CGCG | 1 cut(s) | 334 |
| BshFI | GGCC | 6 cut(s) | 44, 221, 526, 725, 763, 855 |
| BshVI | ATCGAT | 1 cut(s) | 1780 |
| BsiHKCI | CYCGRG | 2 cut(s) | 305, 625 |
| BsiSI | CCGG | 4 cut(s) | 347, 610, 856, 1511 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 862, 1405, 1492 |
| BsmAI | GTCTC | 6 cut(s) | 200, 584, 721, 1148, 1637, 1679 |
| BsmBI | CGTCTC | 1 cut(s) | 1679 |
| BsnI | GGCC | 6 cut(s) | 44, 221, 526, 725, 763, 855 |
| Bso31I | GGTCTC | 1 cut(s) | 721 |
| BsoBI | CYCGRG | 2 cut(s) | 305, 625 |
| Bsp1286I | GDGCHC | 2 cut(s) | 203, 1033 |
| Bsp13I | TCCGGA | 1 cut(s) | 609 |
| Bsp1407I | TGTACA | 1 cut(s) | 683 |
| Bsp143I | GATC | 9 cut(s) | 16, 189, 338, 868, 1129, 1321, 1528, 1633, 1777 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 735 |
| BspACI | CCGC | 5 cut(s) | 178, 228, 241, 1348, 1508 |
| BspANI | GGCC | 6 cut(s) | 44, 221, 526, 725, 763, 855 |
| BspCNI | CTCAG | 9 cut(s) | 15, 196, 355, 832, 1045, 1125, 1326, 1365, 1639 |
| BspDI | ATCGAT | 1 cut(s) | 1780 |
| BspEI | TCCGGA | 1 cut(s) | 609 |
| BspFNI | CGCG | 1 cut(s) | 334 |
| BspHI | TCATGA | 1 cut(s) | 1762 |
| BspMAI | CTGCAG | 1 cut(s) | 1313 |
| BspPI | GGATC | 5 cut(s) | 24, 876, 1536, 1641, 1785 |
| BspTNI | GGTCTC | 1 cut(s) | 721 |
| BsrDI | GCAATG | 1 cut(s) | 1236 |
| BsrGI | TGTACA | 1 cut(s) | 683 |
| BsrI | ACTGG | 4 cut(s) | 140, 157, 542, 1486 |
| BssECI | CCNNGG | 6 cut(s) | 39, 695, 720, 764, 1063, 1491 |
| BssMI | GATC | 9 cut(s) | 16, 189, 338, 868, 1129, 1321, 1528, 1633, 1777 |
| BssNAI | GTATAC | 1 cut(s) | 1358 |
| BssSI | CACGAG | 1 cut(s) | 68 |
| BssT1I | CCWWGG | 4 cut(s) | 695, 720, 764, 1491 |
| Bst1107I | GTATAC | 1 cut(s) | 1358 |
| Bst2BI | CACGAG | 1 cut(s) | 68 |
| Bst4CI | ACNGT | 6 cut(s) | 688, 880, 900, 966, 1660, 1760 |
| Bst6I | CTCTTC | 4 cut(s) | 515, 582, 1266, 1428 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 295, 1478 |
| BstAUI | TGTACA | 1 cut(s) | 683 |
| BstC8I | GCNNGC | 3 cut(s) | 116, 732, 1141 |
| BstDSI | CCRYGG | 1 cut(s) | 39 |
| BstF5I | GGATG | 5 cut(s) | 277, 691, 774, 1539, 1726 |
| BstFNI | CGCG | 1 cut(s) | 334 |
| BstH2I | RGCGCY | 1 cut(s) | 178 |
| BstHHI | GCGC | 4 cut(s) | 177, 312, 336, 1740 |
| BstKTI | GATC | 9 cut(s) | 19, 192, 341, 871, 1132, 1324, 1531, 1636, 1780 |
| BstMAI | GTCTC | 6 cut(s) | 200, 584, 721, 1148, 1637, 1679 |
| BstMBI | GATC | 9 cut(s) | 16, 189, 338, 868, 1129, 1321, 1528, 1633, 1777 |
| BstNSI | RCATGY | 4 cut(s) | 247, 816, 1143, 1556 |
| BstSFI | CTRYAG | 2 cut(s) | 666, 1309 |
| BstSLI | GKGCMC | 1 cut(s) | 203 |
| BstUI | CGCG | 1 cut(s) | 334 |
| BstV1I | GCAGC | 2 cut(s) | 301, 324 |
| BstV2I | GAAGAC | 2 cut(s) | 1248, 1797 |
| BstX2I | RGATCY | 3 cut(s) | 338, 868, 1528 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 13, 40 |
| BstYI | RGATCY | 3 cut(s) | 338, 868, 1528 |
| BstZ17I | GTATAC | 1 cut(s) | 1358 |
| Bsu15I | ATCGAT | 1 cut(s) | 1780 |
| BsuRI | GGCC | 6 cut(s) | 44, 221, 526, 725, 763, 855 |
| BsuTUI | ATCGAT | 1 cut(s) | 1780 |
| BtgI | CCRYGG | 1 cut(s) | 39 |
| BtrI | CACGTC | 1 cut(s) | 809 |
| BtsCI | GGATG | 5 cut(s) | 277, 691, 774, 1539, 1726 |
| BtsIMutI | CAGTG | 4 cut(s) | 133, 201, 693, 885 |
| Cac8I | GCNNGC | 3 cut(s) | 116, 732, 1141 |
| CciI | TCATGA | 1 cut(s) | 1762 |
| CfoI | GCGC | 4 cut(s) | 177, 312, 336, 1740 |
| Cfr13I | GGNCC | 1 cut(s) | 378 |
| ClaI | ATCGAT | 1 cut(s) | 1780 |
| CseI | GACGC | 2 cut(s) | 340, 1661 |
| Csp6I | GTAC | 4 cut(s) | 684, 783, 1556, 1819 |
| CviQI | GTAC | 4 cut(s) | 684, 783, 1556, 1819 |
| DpnI | GATC | 9 cut(s) | 18, 191, 340, 870, 1131, 1323, 1530, 1635, 1779 |
| DpnII | GATC | 9 cut(s) | 16, 189, 338, 868, 1129, 1321, 1528, 1633, 1777 |
| DraI | TTTAAA | 1 cut(s) | 1593 |
| EaeI | YGGCCR | 4 cut(s) | 42, 723, 761, 853 |
| Eam1104I | CTCTTC | 4 cut(s) | 515, 582, 1266, 1428 |
| EarI | CTCTTC | 4 cut(s) | 515, 582, 1266, 1428 |
| EciI | GGCGGA | 1 cut(s) | 1497 |
| Eco130I | CCWWGG | 4 cut(s) | 695, 720, 764, 1491 |
| Eco147I | AGGCCT | 1 cut(s) | 526 |
| Eco24I | GRGCYC | 1 cut(s) | 1033 |
| Eco31I | GGTCTC | 1 cut(s) | 721 |
| Eco32I | GATATC | 2 cut(s) | 1071, 1171 |
| Eco47I | GGWCC | 1 cut(s) | 378 |
| Eco57I | CTGAAG | 2 cut(s) | 606, 1398 |
| Eco88I | CYCGRG | 2 cut(s) | 305, 625 |
| EcoRV | GATATC | 2 cut(s) | 1071, 1171 |
| EcoT14I | CCWWGG | 4 cut(s) | 695, 720, 764, 1491 |
| EcoT22I | ATGCAT | 1 cut(s) | 658 |
| EcoT38I | GRGCYC | 1 cut(s) | 1033 |
| ErhI | CCWWGG | 4 cut(s) | 695, 720, 764, 1491 |
| Esp3I | CGTCTC | 1 cut(s) | 1679 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 81, 113, 179, 211 |
| FauNDI | CATATG | 2 cut(s) | 708, 1829 |
| FblI | GTMKAC | 3 cut(s) | 323, 805, 1357 |
| Fnu4HI | GCNGC | 4 cut(s) | 178, 290, 313, 1349 |
| FokI | GGATG | 5 cut(s) | 264, 678, 781, 1526, 1733 |
| FriOI | GRGCYC | 1 cut(s) | 1033 |
| Fsp4HI | GCNGC | 4 cut(s) | 178, 290, 313, 1349 |
| FspBI | CTAG | 5 cut(s) | 284, 959, 1223, 1547, 1622 |
| GlaI | GCGC | 4 cut(s) | 176, 311, 335, 1739 |
| GluI | GCNGC | 4 cut(s) | 178, 290, 313, 1349 |
| GsuI | CTGGAG | 1 cut(s) | 1149 |
| HaeII | RGCGCY | 1 cut(s) | 178 |
| HaeIII | GGCC | 6 cut(s) | 44, 221, 526, 725, 763, 855 |
| HapII | CCGG | 4 cut(s) | 347, 610, 856, 1511 |
| HgaI | GACGC | 2 cut(s) | 340, 1661 |
| HhaI | GCGC | 4 cut(s) | 177, 312, 336, 1740 |
| Hin6I | GCGC | 4 cut(s) | 175, 310, 334, 1738 |
| HinP1I | GCGC | 4 cut(s) | 175, 310, 334, 1738 |
| HincII | GTYRAC | 2 cut(s) | 324, 876 |
| HindII | GTYRAC | 2 cut(s) | 324, 876 |
| HindIII | AAGCTT | 3 cut(s) | 60, 737, 1106 |
| HinfI | GANTC | 7 cut(s) | 320, 355, 506, 634, 752, 952, 1186 |
| HpaII | CCGG | 4 cut(s) | 347, 610, 856, 1511 |
| HphI | GGTGA | 8 cut(s) | 163, 217, 294, 360, 608, 961, 1167, 1331 |
| Hpy166II | GTNNAC | 9 cut(s) | 154, 162, 324, 806, 876, 892, 1358, 1656, 1821 |
| Hpy8I | GTNNAC | 9 cut(s) | 154, 162, 324, 806, 876, 892, 1358, 1656, 1821 |
| HpyAV | CCTTC | 5 cut(s) | 309, 1101, 1292, 1492, 1711 |
| HpyCH4III | ACNGT | 6 cut(s) | 688, 880, 900, 966, 1660, 1760 |
| HpyCH4IV | ACGT | 1 cut(s) | 808 |
| HpyCH4V | TGCA | 8 cut(s) | 289, 656, 691, 812, 1311, 1328, 1814, 1827 |
| HpySE526I | ACGT | 1 cut(s) | 808 |
| HspAI | GCGC | 4 cut(s) | 175, 310, 334, 1738 |
| Kpn2I | TCCGGA | 1 cut(s) | 609 |
| Kzo9I | GATC | 9 cut(s) | 16, 189, 338, 868, 1129, 1321, 1528, 1633, 1777 |
| LmnI | GCTCC | 5 cut(s) | 139, 172, 259, 320, 417 |
| Lsp1109I | GCAGC | 2 cut(s) | 301, 324 |
| LweI | GCATC | 6 cut(s) | 285, 700, 759, 994, 1348, 1548 |
| MaeI | CTAG | 5 cut(s) | 284, 959, 1223, 1547, 1622 |
| MaeII | ACGT | 1 cut(s) | 808 |
| MaeIII | GTNAC | 3 cut(s) | 366, 559, 1214 |
| MalI | GATC | 9 cut(s) | 18, 191, 340, 870, 1131, 1323, 1530, 1635, 1779 |
| MboI | GATC | 9 cut(s) | 16, 189, 338, 868, 1129, 1321, 1528, 1633, 1777 |
| MflI | RGATCY | 3 cut(s) | 338, 868, 1528 |
| MhlI | GDGCHC | 2 cut(s) | 203, 1033 |
| MlsI | TGGCCA | 2 cut(s) | 725, 763 |
| MluNI | TGGCCA | 2 cut(s) | 725, 763 |
| MlyI | GAGTC | 2 cut(s) | 329, 364 |
| Mox20I | TGGCCA | 2 cut(s) | 725, 763 |
| Mph1103I | ATGCAT | 1 cut(s) | 658 |
| MroI | TCCGGA | 1 cut(s) | 609 |
| MroXI | GAANNNNTTC | 1 cut(s) | 158 |
| MscI | TGGCCA | 2 cut(s) | 725, 763 |
| MseI | TTAA | 1 cut(s) | 1592 |
| MslI | CAYNNNNRTG | 1 cut(s) | 373 |
| Msp20I | TGGCCA | 2 cut(s) | 725, 763 |
| MspA1I | CMGCKG | 3 cut(s) | 292, 584, 1333 |
| MspI | CCGG | 4 cut(s) | 347, 610, 856, 1511 |
| MvnI | CGCG | 1 cut(s) | 334 |
| NdeI | CATATG | 2 cut(s) | 708, 1829 |
| NdeII | GATC | 9 cut(s) | 16, 189, 338, 868, 1129, 1321, 1528, 1633, 1777 |
| NmeAIII | GCCGAG | 1 cut(s) | 956 |
| NmuCI | GTSAC | 1 cut(s) | 366 |
| NsiI | ATGCAT | 1 cut(s) | 658 |
| NspI | RCATGY | 4 cut(s) | 247, 816, 1143, 1556 |
| PaeI | GCATGC | 1 cut(s) | 1143 |
| PagI | TCATGA | 1 cut(s) | 1762 |
| PceI | AGGCCT | 1 cut(s) | 526 |
| PciI | ACATGT | 1 cut(s) | 1552 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1206 |
| PdmI | GAANNNNTTC | 1 cut(s) | 158 |
| PfeI | GAWTC | 5 cut(s) | 506, 634, 752, 952, 1186 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1405, 1492 |
| PkrI | GCNGC | 4 cut(s) | 179, 291, 314, 1350 |
| PleI | GAGTC | 2 cut(s) | 328, 363 |
| PpsI | GAGTC | 2 cut(s) | 328, 363 |
| PscI | ACATGT | 1 cut(s) | 1552 |
| PsiI | TTATAA | 1 cut(s) | 1607 |
| PspPI | GGNCC | 1 cut(s) | 378 |
| PstI | CTGCAG | 1 cut(s) | 1313 |
| PsuI | RGATCY | 3 cut(s) | 338, 868, 1528 |
| PvuII | CAGCTG | 3 cut(s) | 292, 584, 1333 |
| RsaI | GTAC | 4 cut(s) | 685, 784, 1557, 1820 |
| RsaNI | GTAC | 4 cut(s) | 684, 783, 1556, 1819 |
| RseI | CAYNNNNRTG | 1 cut(s) | 373 |
| SalI | GTCGAC | 1 cut(s) | 322 |
| SaqAI | TTAA | 1 cut(s) | 1592 |
| SatI | GCNGC | 4 cut(s) | 178, 290, 313, 1349 |
| Sau3AI | GATC | 9 cut(s) | 16, 189, 338, 868, 1129, 1321, 1528, 1633, 1777 |
| Sau96I | GGNCC | 1 cut(s) | 378 |
| SchI | GAGTC | 2 cut(s) | 329, 364 |
| SduI | GDGCHC | 2 cut(s) | 203, 1033 |
| SfaNI | GCATC | 6 cut(s) | 285, 700, 759, 994, 1348, 1548 |
| SfcI | CTRYAG | 2 cut(s) | 666, 1309 |
| SinI | GGWCC | 1 cut(s) | 378 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 373 |
| SmlI | CTYRAG | 4 cut(s) | 98, 452, 1583, 1676 |
| SmoI | CTYRAG | 4 cut(s) | 98, 452, 1583, 1676 |
| SphI | GCATGC | 1 cut(s) | 1143 |
| SseBI | AGGCCT | 1 cut(s) | 526 |
| SsiI | CCGC | 5 cut(s) | 178, 228, 241, 1348, 1508 |
| SspI | AATATT | 1 cut(s) | 495 |
| SspMI | CTAG | 5 cut(s) | 284, 959, 1223, 1547, 1622 |
| StuI | AGGCCT | 1 cut(s) | 526 |
| StyI | CCWWGG | 4 cut(s) | 695, 720, 764, 1491 |
| TaaI | ACNGT | 6 cut(s) | 688, 880, 900, 966, 1660, 1760 |
| TaiI | ACGT | 1 cut(s) | 811 |
| TaqI | TCGA | 9 cut(s) | 183, 216, 323, 393, 744, 750, 999, 1200, 1780 |
| TatI | WGTACW | 3 cut(s) | 683, 782, 1818 |
| TauI | GCSGC | 2 cut(s) | 180, 1351 |
| TfiI | GAWTC | 5 cut(s) | 506, 634, 752, 952, 1186 |
| Tru1I | TTAA | 1 cut(s) | 1592 |
| Tru9I | TTAA | 1 cut(s) | 1592 |
| TscAI | CASTG | 4 cut(s) | 140, 208, 693, 885 |
| TseFI | GTSAC | 1 cut(s) | 366 |
| TseI | GCWGC | 2 cut(s) | 289, 312 |
| Tsp45I | GTSAC | 1 cut(s) | 366 |
| TspDTI | ATGAA | 3 cut(s) | 459, 1431, 1803 |
| TspRI | CASTG | 4 cut(s) | 140, 208, 693, 885 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1405, 1492 |
| VpaK11BI | GGWCC | 1 cut(s) | 378 |
| XapI | RAATTY | 2 cut(s) | 1122, 1588 |
| XceI | RCATGY | 4 cut(s) | 247, 816, 1143, 1556 |
| XmiI | GTMKAC | 3 cut(s) | 323, 805, 1357 |
| XmnI | GAANNNNTTC | 1 cut(s) | 158 |
| XspI | CTAG | 5 cut(s) | 284, 959, 1223, 1547, 1622 |
| Zsp2I | ATGCAT | 1 cut(s) | 658 |