Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00908

Orthogroup ID

OG0000917

Physical Location & Seq

Genomic Coordinates Forward (+)

45986 .. 49758

Gene Structure 3773 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G020240.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGTCTACCTCAAGATATTCAGAGAAATTCATTTCCAAGTTGCTTGATCGTCTCGGAAAAGCCACCGCTGTCGCCAACCTAGATGTCGATGATCATAAGGTTAAATCAGACGTCAAAAAAATTGGCCAGGAGCTTGAAAACTTGAAGAAATTGGTACCCAGAGTCAAGCTCTGGGAGCAGACTCTGCTTAACCAATTCACAGACATAGAACGCGGCCTTGAAAAGATTATCTGCGGAGTTGAGCTCAACTTCGATGATGCGTTTGGACGCATGGTCAAAAATGTCAAAAAAATAAAAGAATTAGCGGTTGCCATGAACTCAATGCCCGCAGCTGAAGACACTGCGCCAGAATCATCCACTCGTACGTCTCAGTTGCGTCAAGCAGCTCAGTATCCGCTGACACAACAATGGTTAGAGCTGGACCTGGTCAGTGATGTATATGACAGATCAGCAGGACACTTGAACAGCATAAGAAGGAGCTATGAACATCTTGATAGCATTGAGTTGAAGATGTGCTTCCTTTCTTTGTCAATATTCCCCGAGGACTCTATAATAAAGAAGAGGCCACTAATTTACTGGTGGATTGGTGAGGGCTTCATTACAAGCACCCAAGACAGGACTGCCGAAGAAGTAGGGGAAGGAATCTTTGAAAACCTCTTGAGGAAGGGATTAGTTCAGCCAATTGAAACCAGTGGCAGTCCAATTGTGAATAGCTGTAAAATTCACCATTGGATTCGTCATATGTTGATCTTCGTGGCGGAGGAAGCTTTGCTCTTCAACTTTGATCGAATATGGCCAAGGACGCCATCGTTTCCTAATGATGAGTCGGGTTGTAGCCGTGCATGCTTGACTTTTGAGAAGCCAGTCCCTCTGCAGGCTCCTGAAGATCTGTGGACAGTATTCAATGTAGACGAGCAGTTTCTTGATCTGAAACGTGAATGGCTTACTAAGCTGAAGAAGGTTGCAGTTATTCAATTGGGACGGTGGCAAGGATTGCCTACTCATCACATTGAAGTGGAGGATGAAGCATTCTTAGAGGGTTTGGGAGGTCATCAGAATAAGCACTTGAAATATCTGAGCCTCCGAGGAATATCACTAATTACCGAACTACCTTCTTGTATCTTTAATATCACCAGCCTTGAAATTCTGGATCTGAGAGCATGTCACAGCTTAGAGACATTGCCTGAAGATATCTCACCACTGAGGAGACTCACCCATTTCGACATATCCGAGTGTTACTTGCTAGACAGCATGCCGAAAGGGATTGACAAACTTTCTTACCTCCAAGTACTCAAAGGTTATGTGATAGGAGATTTGAAAAGTACTCCATGCAGAATTGGTGATTTCGCCAAGTTGAATAAGTTAAGGCGCCTCAGTATACACATTGCGAATAAGGCTGTAGTTCGACAAGGGGAGTTCAATGAGTTCAAGAAAATTGAATCTCTTCGGTGCCTCAAAATTTCATGGGGAAAGGTTTCTGCACAGATAACAACCGAGTCATTGGAGGTTTCATTTCCACTGCATTTAGAAAAGTTGGCTCTTCAAGGCATCCCTCAAGTAAATGTACCCAAATGGCTGAACCCAAAGCAACTCAAAAATTTAAAGAGCCTCTATGTAGCAGGTGGAAAGCTTCGTAGCTTGGACCATGAGGAGCATGAGTGCGAGTGGGCAGTGGAAGTCTTGCGTCTCAAATACTTGAGTAATTTCGAAAATAAGAGTGACTCAGCCTTGAATCAAGAGTTTCCTAGGCTGCGCTACTTGGAGATGATAAAATGTAACAAGGTTGTCGAGAAGATAAAATGTAACAAGGTTGAAGTCGAAGATGGAATCATGGAACCGCCGAAGTGGTTCGACGCTGAAGTGGTATTTGGACCCAGGGAACGCAGAGTTCTGCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04014 map04014

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

632

Amino Acids

72.65

Weight (kDa)

7.23

Isoelectric Point (pI)

48.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_DRP	PF23559	178 - 247	2.6e-16	Disease resistance protein Winged helix domain
LRR_14	PF23598	354 - 590	8.1e-25	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000917)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g29201 FvH4_6g29201 FvH4_6g29201
malus_domestica	MD09G1222600.v1.1
prunus_persica	Prupe.3G175600_v2.0.a1 Prupe.3G175600_v2.0.a1 Prupe.3G176100_v2.0.a1 Prupe.4G057900_v2.0.a1
pyrus_communis	pycom808g00780
rosa_chinensis	RchiOBHm_Chr2g0111461 RchiOBHm_Chr2g0112821 RchiOBHm_Chr2g0151861 RchiOBHm_Chr2g0152221
rosa_laevigata	RLG00000018013 RLG00000018014 RLG00000020584 RLG00000020617
rosa_multiflora	Rmu_co8270923.1_g000001 Rmu_sc0001687.1_g000009 Rmu_sc0002351.1_g000014 Rmu_sc0003043.1_g000010 Rmu_sc0004286.1_g000015 Rmu_sc0005294.1_g000017 Rmu_sc0005791.1_g000005 Rmu_sc0006226.1_g000001 Rmu_sc0008578.1_g000006 Rmu_sc0017895.1_g000007 Rmu_sc0023925.1_g000005 Rmu_ssc0000400.1_g000039
rosa_roxburghii	Rroxscaffold_2G00096130 Rroxscaffold_2G00131120 Rroxscaffold_4G00302580 Rroxscaffold_7G00189350
rosa_rugosa	Rorug02G0174500 Rorug02G0182800 Rorug02G0429200 Rorug02G0429600.1 Rorug02G0431300 Rorug02G0431400 Rorug02G0431500
rosa_samantha	Rh2AG227200 Rh2AG237600 Rh2AG490200 Rh2AG490400 Rh2AG492800 Rh2BG239000 Rh2BG250300 Rh2BG502600 Rh2BG505400 Rh2CG230800 Rh2CG241400 Rh2CG476500 Rh2CG476800 Rh2CG479200 Rh2DG234800 Rh2DG245100 Rh2DG513800 Rh2DG516600
rosa_wichuraiana	Rw0G018020 Rw0G020240 Rw2G018600 Rw2G040180 Rw2G040300 Rw2G040500 Rw2G040520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1610
AatII	GACGTC	1 cut(s)	114
Acc36I	ACCTGC	1 cut(s)	1610
Acc65I	GGTACC	1 cut(s)	154
AccB1I	GGYRCC	3 cut(s)	154, 1368, 1449
AccI	GTMKAC	3 cut(s)	5, 909, 1378
AccII	CGCG	1 cut(s)	213
AciI	CCGC	8 cut(s)	66, 213, 234, 305, 327, 395, 758, 1838
AclWI	GGATC	1 cut(s)	1158
AcoI	YGGCCR	2 cut(s)	124, 794
AcsI	RAATTY	5 cut(s)	26, 720, 1143, 1458, 1597
AcuI	CTGAAG	5 cut(s)	354, 903, 974, 1206, 1878
AcyI	GRCGYC	3 cut(s)	111, 803, 1369
AfaI	GTAC	5 cut(s)	156, 364, 1290, 1324, 1566
AfiI	CCNNNNNNNGG	2 cut(s)	615, 874
AhdI	GACNNNNNGTC	1 cut(s)	272
AjnI	CCWGG	3 cut(s)	126, 423, 1874
AjuI	GAANNNNNNNTTGG	2 cut(s)	1851, 1883
Alw21I	GWGCWC	1 cut(s)	246
Alw26I	GTCTC	5 cut(s)	56, 372, 1169, 1201, 1691
AlwI	GGATC	1 cut(s)	1158
AlwNI	CAGNNNCTG	1 cut(s)	184
Ama87I	CYCGRG	1 cut(s)	539
AoxI	GGCC	4 cut(s)	124, 214, 563, 794
ApeKI	GCWGC	3 cut(s)	329, 383, 1750
ApoI	RAATTY	5 cut(s)	26, 720, 1143, 1458, 1597
Asp700I	GAANNNNTTC	3 cut(s)	1443, 1474, 1847
Asp718I	GGTACC	1 cut(s)	154
AspA2I	CCTAGG	1 cut(s)	1745
AspLEI	GCGC	3 cut(s)	346, 1371, 1755
AspS9I	GGNCC	3 cut(s)	421, 1642, 1871
AsuHPI	GGTGA	6 cut(s)	599, 716, 1123, 1188, 1204, 1352
AsuII	TTCGAA	1 cut(s)	1707
AvaI	CYCGRG	1 cut(s)	539
AvaII	GGWCC	3 cut(s)	421, 1642, 1871
AvrII	CCTAGG	1 cut(s)	1745
BalI	TGGCCA	2 cut(s)	126, 796
BanI	GGYRCC	3 cut(s)	154, 1368, 1449
BanII	GRGCYC	1 cut(s)	246
BbsI	GAAGAC	1 cut(s)	342
Bbv12I	GWGCWC	1 cut(s)	246
BbvI	GCAGC	3 cut(s)	341, 395, 1737
BccI	CCATC	2 cut(s)	814, 1817
BceAI	ACGGC	1 cut(s)	822
BciT130I	CCWGG	3 cut(s)	128, 425, 1876
BciVI	GTATCC	1 cut(s)	402
BclI	TGATCA	1 cut(s)	91
BcoDI	GTCTC	5 cut(s)	56, 372, 1169, 1201, 1691
BfaI	CTAG	3 cut(s)	80, 1244, 1746
BfmI	CTRYAG	2 cut(s)	872, 1398
BfoI	RGCGCY	1 cut(s)	1372
BfuAI	ACCTGC	1 cut(s)	1610
BfuI	GTATCC	1 cut(s)	402
BglII	AGATCT	1 cut(s)	886
BisI	GCNGC	4 cut(s)	214, 330, 384, 1751
BlnI	CCTAGG	1 cut(s)	1745
BlsI	GCNGC	4 cut(s)	215, 331, 385, 1752
BmcAI	AGTACT	2 cut(s)	1290, 1324
Bme1390I	CCNGG	3 cut(s)	128, 425, 1876
Bme18I	GGWCC	3 cut(s)	421, 1642, 1871
BmeRI	GACNNNNNGTC	1 cut(s)	272
BmeT110I	CYCGRG	1 cut(s)	539
BmgT120I	GGNCC	3 cut(s)	421, 1642, 1871
BmiI	GGNNCC	6 cut(s)	156, 879, 1370, 1451, 1836, 1873
BmrFI	CCNGG	3 cut(s)	128, 425, 1876
BmsI	GCATC	2 cut(s)	247, 1557
BpiI	GAAGAC	1 cut(s)	342
BplI	GAGNNNNNCTC	4 cut(s)	153, 185, 228, 260
Bpu14I	TTCGAA	1 cut(s)	1707
BpuEI	CTTGAG	3 cut(s)	679, 1539, 1717
BsaHI	GRCGYC	3 cut(s)	111, 803, 1369
BsaJI	CCNNGG	6 cut(s)	540, 797, 1084, 1745, 1874, 1875
BsaXI	ACNNNNNCTCC	2 cut(s)	1643, 1673
Bsc4I	CCNNNNNNNGG	2 cut(s)	615, 874
Bse1I	ACTGG	3 cut(s)	581, 690, 863
Bse3DI	GCAATG	2 cut(s)	1178, 1383
BseBI	CCWGG	3 cut(s)	128, 425, 1876
BseDI	CCNNGG	6 cut(s)	540, 797, 1084, 1745, 1874, 1875
BseGI	GGATG	3 cut(s)	353, 1027, 1548
BseLI	CCNNNNNNNGG	2 cut(s)	615, 874
BseMI	GCAATG	2 cut(s)	1178, 1383
BseMII	CTCAG	7 cut(s)	383, 401, 1067, 1145, 1193, 1387, 1737
BseNI	ACTGG	3 cut(s)	581, 690, 863
BseRI	GAGGAG	2 cut(s)	1219, 1664
BseXI	GCAGC	3 cut(s)	341, 395, 1737
BsgI	GTGCAG	1 cut(s)	1464
Bsh1236I	CGCG	1 cut(s)	213
BshFI	GGCC	4 cut(s)	126, 216, 565, 796
BshNI	GGYRCC	3 cut(s)	154, 1368, 1449
BsiHKAI	GWGCWC	1 cut(s)	246
BsiHKCI	CYCGRG	1 cut(s)	539
BsiWI	CGTACG	1 cut(s)	362
BslFI	GGGAC	2 cut(s)	851, 993
BslI	CCNNNNNNNGG	2 cut(s)	615, 874
BsmAI	GTCTC	5 cut(s)	56, 372, 1169, 1201, 1691
BsmBI	CGTCTC	3 cut(s)	56, 372, 1691
BsmFI	GGGAC	2 cut(s)	851, 993
BsmI	GAATGC	1 cut(s)	1028
BsnI	GGCC	4 cut(s)	126, 216, 565, 796
BsoBI	CYCGRG	1 cut(s)	539
Bsp119I	TTCGAA	1 cut(s)	1707
Bsp1286I	GDGCHC	1 cut(s)	246
Bsp143I	GATC	8 cut(s)	46, 91, 446, 747, 784, 886, 925, 1150
BspACI	CCGC	8 cut(s)	66, 213, 234, 305, 327, 395, 758, 1838
BspANI	GGCC	4 cut(s)	126, 216, 565, 796
BspCNI	CTCAG	7 cut(s)	382, 400, 1068, 1146, 1194, 1386, 1736
BspFNI	CGCG	1 cut(s)	213
BspLI	GGNNCC	6 cut(s)	156, 879, 1370, 1451, 1836, 1873
BspMAI	CTGCAG	1 cut(s)	876
BspMI	ACCTGC	1 cut(s)	1610
BspPI	GGATC	1 cut(s)	1158
BspQI	GCTCTTC	2 cut(s)	779, 1545
BspT104I	TTCGAA	1 cut(s)	1707
BspT107I	GGYRCC	3 cut(s)	154, 1368, 1449
BsrDI	GCAATG	2 cut(s)	1178, 1383
BsrI	ACTGG	3 cut(s)	581, 690, 863
BssECI	CCNNGG	6 cut(s)	540, 797, 1084, 1745, 1874, 1875
BssMI	GATC	8 cut(s)	46, 91, 446, 747, 784, 886, 925, 1150
BssNAI	GTATAC	1 cut(s)	1379
BssNI	GRCGYC	3 cut(s)	111, 803, 1369
BssT1I	CCWWGG	2 cut(s)	797, 1745
Bst1107I	GTATAC	1 cut(s)	1379
Bst2UI	CCWGG	3 cut(s)	128, 425, 1876
Bst4CI	ACNGT	2 cut(s)	898, 984
Bst6I	CTCTTC	4 cut(s)	554, 779, 1449, 1545
BstACI	GRCGYC	3 cut(s)	111, 803, 1369
BstAPI	GCANNNNNTGC	2 cut(s)	184, 994
BstBI	TTCGAA	1 cut(s)	1707
BstC8I	GCNNGC	4 cut(s)	327, 844, 876, 1253
BstF5I	GGATG	3 cut(s)	353, 1027, 1548
BstFNI	CGCG	1 cut(s)	213
BstH2I	RGCGCY	1 cut(s)	1372
BstHHI	GCGC	3 cut(s)	346, 1371, 1755
BstKTI	GATC	8 cut(s)	49, 94, 449, 750, 787, 889, 928, 1153
BstMAI	GTCTC	5 cut(s)	56, 372, 1169, 1201, 1691
BstMBI	GATC	8 cut(s)	46, 91, 446, 747, 784, 886, 925, 1150
BstMWI	GCNNNNNNNGC	8 cut(s)	175, 184, 764, 802, 843, 949, 994, 1394
BstNI	CCWGG	3 cut(s)	128, 425, 1876
BstNSI	RCATGY	3 cut(s)	846, 1164, 1255
BstSCI	CCNGG	3 cut(s)	126, 423, 1874
BstSFI	CTRYAG	2 cut(s)	872, 1398
BstUI	CGCG	1 cut(s)	213
BstV1I	GCAGC	3 cut(s)	341, 395, 1737
BstV2I	GAAGAC	1 cut(s)	342
BstX2I	RGATCY	2 cut(s)	886, 1150
BstYI	RGATCY	2 cut(s)	886, 1150
BstZ17I	GTATAC	1 cut(s)	1379
BsuI	GTATCC	1 cut(s)	402
BsuRI	GGCC	4 cut(s)	126, 216, 565, 796
BtsCI	GGATG	3 cut(s)	353, 1027, 1548
BtsI	GCAGTG	3 cut(s)	339, 1517, 1677
BtsIMutI	CAGTG	6 cut(s)	339, 436, 697, 1199, 1517, 1677
BveI	ACCTGC	1 cut(s)	1610
Cac8I	GCNNGC	4 cut(s)	327, 844, 876, 1253
CaiI	CAGNNNCTG	1 cut(s)	184
CfoI	GCGC	3 cut(s)	346, 1371, 1755
Cfr13I	GGNCC	3 cut(s)	421, 1642, 1871
CseI	GACGC	5 cut(s)	276, 365, 811, 1673, 1862
CsiI	ACCWGGT	1 cut(s)	423
Csp6I	GTAC	5 cut(s)	155, 363, 1289, 1323, 1565
CviQI	GTAC	5 cut(s)	155, 363, 1289, 1323, 1565
DinI	GGCGCC	1 cut(s)	1370
DpnI	GATC	8 cut(s)	48, 93, 448, 749, 786, 888, 927, 1152
DpnII	GATC	8 cut(s)	46, 91, 446, 747, 784, 886, 925, 1150
DraI	TTTAAA	1 cut(s)	1602
DriI	GACNNNNNGTC	1 cut(s)	272
EaeI	YGGCCR	2 cut(s)	124, 794
Eam1104I	CTCTTC	4 cut(s)	554, 779, 1449, 1545
Eam1105I	GACNNNNNGTC	1 cut(s)	272
EarI	CTCTTC	4 cut(s)	554, 779, 1449, 1545
EciI	GGCGGA	1 cut(s)	773
Ecl136II	GAGCTC	1 cut(s)	244
Eco130I	CCWWGG	2 cut(s)	797, 1745
Eco24I	GRGCYC	1 cut(s)	246
Eco32I	GATATC	1 cut(s)	1192
Eco47I	GGWCC	3 cut(s)	421, 1642, 1871
Eco53kI	GAGCTC	1 cut(s)	244
Eco57I	CTGAAG	5 cut(s)	354, 903, 974, 1206, 1878
Eco88I	CYCGRG	1 cut(s)	539
EcoICRI	GAGCTC	1 cut(s)	244
EcoRII	CCWGG	3 cut(s)	126, 423, 1874
EcoRV	GATATC	1 cut(s)	1192
EcoT14I	CCWWGG	2 cut(s)	797, 1745
EcoT38I	GRGCYC	1 cut(s)	246
EgeI	GGCGCC	1 cut(s)	1370
EheI	GGCGCC	1 cut(s)	1370
ErhI	CCWWGG	2 cut(s)	797, 1745
Esp3I	CGTCTC	3 cut(s)	56, 372, 1691
FalI	AAGNNNNNCTT	2 cut(s)	500, 532
FaqI	GGGAC	2 cut(s)	851, 993
FauI	CCCGC	1 cut(s)	334
FauNDI	CATATG	1 cut(s)	741
FbaI	TGATCA	1 cut(s)	91
FblI	GTMKAC	3 cut(s)	5, 909, 1378
Fnu4HI	GCNGC	4 cut(s)	214, 330, 384, 1751
FokI	GGATG	3 cut(s)	340, 1034, 1535
FriOI	GRGCYC	1 cut(s)	246
Fsp4HI	GCNGC	4 cut(s)	214, 330, 384, 1751
FspBI	CTAG	3 cut(s)	80, 1244, 1746
GlaI	GCGC	3 cut(s)	345, 1370, 1754
GluI	GCNGC	4 cut(s)	214, 330, 384, 1751
HaeII	RGCGCY	1 cut(s)	1372
HaeIII	GGCC	4 cut(s)	126, 216, 565, 796
HgaI	GACGC	5 cut(s)	276, 365, 811, 1673, 1862
HhaI	GCGC	3 cut(s)	346, 1371, 1755
Hin1I	GRCGYC	3 cut(s)	111, 803, 1369
Hin6I	GCGC	3 cut(s)	344, 1369, 1753
HinP1I	GCGC	3 cut(s)	344, 1369, 1753
HindIII	AAGCTT	2 cut(s)	765, 1628
HphI	GGTGA	6 cut(s)	599, 716, 1123, 1188, 1204, 1352
Hpy166II	GTNNAC	4 cut(s)	6, 894, 910, 1379
Hpy188I	TCNGA	9 cut(s)	22, 56, 109, 930, 1056, 1077, 1085, 1155, 1231
Hpy188III	TCNNGA	9 cut(s)	12, 491, 658, 881, 923, 1148, 1429, 1736, 1789
Hpy8I	GTNNAC	4 cut(s)	6, 894, 910, 1379
Hpy99I	CGWCG	1 cut(s)	1856
HpyAV	CCTTC	5 cut(s)	468, 632, 658, 952, 1122
HpyCH4III	ACNGT	2 cut(s)	898, 984
HpyCH4IV	ACGT	3 cut(s)	111, 365, 934
HpyCH4V	TGCA	6 cut(s)	842, 874, 965, 1332, 1481, 1522
HpyF10VI	GCNNNNNNNGC	8 cut(s)	175, 184, 764, 802, 843, 949, 994, 1394
HpySE526I	ACGT	3 cut(s)	111, 365, 934
Hsp92I	GRCGYC	3 cut(s)	111, 803, 1369
HspAI	GCGC	3 cut(s)	344, 1369, 1753
KasI	GGCGCC	1 cut(s)	1368
KpnI	GGTACC	1 cut(s)	158
Ksp22I	TGATCA	1 cut(s)	91
Kzo9I	GATC	8 cut(s)	46, 91, 446, 747, 784, 886, 925, 1150
LguI	GCTCTTC	2 cut(s)	779, 1545
LmnI	GCTCC	5 cut(s)	130, 175, 477, 883, 1651
Lsp1109I	GCAGC	3 cut(s)	341, 395, 1737
LweI	GCATC	2 cut(s)	247, 1557
MabI	ACCWGGT	1 cut(s)	423
MaeI	CTAG	3 cut(s)	80, 1244, 1746
MaeII	ACGT	3 cut(s)	111, 365, 934
MaeIII	GTNAC	5 cut(s)	1163, 1235, 1718, 1775, 1802
MalI	GATC	8 cut(s)	48, 93, 448, 749, 786, 888, 927, 1152
MboI	GATC	8 cut(s)	46, 91, 446, 747, 784, 886, 925, 1150
MfeI	CAATTG	3 cut(s)	681, 702, 974
MflI	RGATCY	2 cut(s)	886, 1150
MhlI	GDGCHC	1 cut(s)	246
MlsI	TGGCCA	2 cut(s)	126, 796
MluNI	TGGCCA	2 cut(s)	126, 796
Mly113I	GGCGCC	1 cut(s)	1369
MlyI	GAGTC	7 cut(s)	171, 175, 539, 833, 1203, 1505, 1715
Mox20I	TGGCCA	2 cut(s)	126, 796
MroXI	GAANNNNTTC	3 cut(s)	1443, 1474, 1847
MscI	TGGCCA	2 cut(s)	126, 796
MseI	TTAA	5 cut(s)	102, 189, 1125, 1364, 1601
MslI	CAYNNNNRTG	2 cut(s)	406, 1013
Msp20I	TGGCCA	2 cut(s)	126, 796
MspA1I	CMGCKG	3 cut(s)	68, 332, 397
MspR9I	CCNGG	3 cut(s)	128, 425, 1876
MunI	CAATTG	3 cut(s)	681, 702, 974
Mva1269I	GAATGC	1 cut(s)	1028
MvaI	CCWGG	3 cut(s)	128, 425, 1876
MvnI	CGCG	1 cut(s)	213
MwoI	GCNNNNNNNGC	8 cut(s)	175, 184, 764, 802, 843, 949, 994, 1394
NarI	GGCGCC	1 cut(s)	1369
NdeI	CATATG	1 cut(s)	741
NdeII	GATC	8 cut(s)	46, 91, 446, 747, 784, 886, 925, 1150
NlaIV	GGNNCC	6 cut(s)	156, 879, 1370, 1451, 1836, 1873
NmuCI	GTSAC	2 cut(s)	1163, 1718
NspI	RCATGY	3 cut(s)	846, 1164, 1255
NspV	TTCGAA	1 cut(s)	1707
PaeI	GCATGC	2 cut(s)	846, 1255
PaqCI	CACCTGC	1 cut(s)	1610
PasI	CCCWGGG	1 cut(s)	1875
PciSI	GCTCTTC	2 cut(s)	779, 1545
PcsI	WCGNNNNNNNCGW	1 cut(s)	1227
PctI	GAATGC	1 cut(s)	1028
PdmI	GAANNNNTTC	3 cut(s)	1443, 1474, 1847
PfeI	GAWTC	6 cut(s)	350, 642, 733, 1439, 1732, 1827
Pfl23II	CGTACG	1 cut(s)	362
PflFI	GACNNNGTC	1 cut(s)	425
PkrI	GCNGC	4 cut(s)	215, 331, 385, 1752
PleI	GAGTC	7 cut(s)	170, 175, 539, 832, 1203, 1504, 1715
PluTI	GGCGCC	1 cut(s)	1372
PpsI	GAGTC	7 cut(s)	170, 175, 539, 832, 1203, 1504, 1715
Psp124BI	GAGCTC	1 cut(s)	246
Psp6I	CCWGG	3 cut(s)	126, 423, 1874
PspGI	CCWGG	3 cut(s)	126, 423, 1874
PspLI	CGTACG	1 cut(s)	362
PspN4I	GGNNCC	6 cut(s)	156, 879, 1370, 1451, 1836, 1873
PspPI	GGNCC	3 cut(s)	421, 1642, 1871
PstI	CTGCAG	1 cut(s)	876
PstNI	CAGNNNCTG	1 cut(s)	184
PsuI	RGATCY	2 cut(s)	886, 1150
PsyI	GACNNNGTC	1 cut(s)	425
PvuII	CAGCTG	1 cut(s)	332
RsaI	GTAC	5 cut(s)	156, 364, 1290, 1324, 1566
RsaNI	GTAC	5 cut(s)	155, 363, 1289, 1323, 1565
RseI	CAYNNNNRTG	2 cut(s)	406, 1013
SacI	GAGCTC	1 cut(s)	246
SapI	GCTCTTC	2 cut(s)	779, 1545
SaqAI	TTAA	5 cut(s)	102, 189, 1125, 1364, 1601
SatI	GCNGC	4 cut(s)	214, 330, 384, 1751
Sau3AI	GATC	8 cut(s)	46, 91, 446, 747, 784, 886, 925, 1150
Sau96I	GGNCC	3 cut(s)	421, 1642, 1871
ScaI	AGTACT	2 cut(s)	1290, 1324
SchI	GAGTC	7 cut(s)	171, 175, 539, 833, 1203, 1505, 1715
ScrFI	CCNGG	3 cut(s)	128, 425, 1876
SduI	GDGCHC	1 cut(s)	246
SexAI	ACCWGGT	1 cut(s)	423
SfaNI	GCATC	2 cut(s)	247, 1557
SfcI	CTRYAG	2 cut(s)	872, 1398
SfoI	GGCGCC	1 cut(s)	1370
SfuI	TTCGAA	1 cut(s)	1707
SinI	GGWCC	3 cut(s)	421, 1642, 1871
SmiMI	CAYNNNNRTG	2 cut(s)	406, 1013
SmlI	CTYRAG	4 cut(s)	10, 658, 1554, 1696
SmoI	CTYRAG	4 cut(s)	10, 658, 1554, 1696
SphI	GCATGC	2 cut(s)	846, 1255
SsiI	CCGC	8 cut(s)	66, 213, 234, 305, 327, 395, 758, 1838
SspDI	GGCGCC	1 cut(s)	1368
SspI	AATATT	1 cut(s)	534
SspMI	CTAG	3 cut(s)	80, 1244, 1746
SstI	GAGCTC	1 cut(s)	246
StyD4I	CCNGG	3 cut(s)	126, 423, 1874
StyI	CCWWGG	2 cut(s)	797, 1745
TaaI	ACNGT	2 cut(s)	898, 984
TaiI	ACGT	3 cut(s)	114, 368, 937
TaqI	TCGA	9 cut(s)	87, 252, 787, 1221, 1405, 1707, 1788, 1818, 1851
TatI	WGTACW	2 cut(s)	1288, 1322
TauI	GCSGC	1 cut(s)	216
TfiI	GAWTC	6 cut(s)	350, 642, 733, 1439, 1732, 1827
Tru1I	TTAA	5 cut(s)	102, 189, 1125, 1364, 1601
Tru9I	TTAA	5 cut(s)	102, 189, 1125, 1364, 1601
TscAI	CASTG	6 cut(s)	346, 436, 697, 1206, 1524, 1677
TseFI	GTSAC	2 cut(s)	1163, 1718
TseI	GCWGC	3 cut(s)	329, 383, 1750
Tsp45I	GTSAC	2 cut(s)	1163, 1718
TspDTI	ATGAA	7 cut(s)	19, 329, 498, 586, 1038, 1452, 1500
TspRI	CASTG	6 cut(s)	346, 436, 697, 1206, 1524, 1677
Tth111I	GACNNNGTC	1 cut(s)	425
VpaK11BI	GGWCC	3 cut(s)	421, 1642, 1871
XapI	RAATTY	5 cut(s)	26, 720, 1143, 1458, 1597
XceI	RCATGY	3 cut(s)	846, 1164, 1255
XcmI	CCANNNNNNNNNTGG	1 cut(s)	573
XmaJI	CCTAGG	1 cut(s)	1745
XmiI	GTMKAC	3 cut(s)	5, 909, 1378
XmnI	GAANNNNTTC	3 cut(s)	1443, 1474, 1847
XspI	CTAG	3 cut(s)	80, 1244, 1746
ZraI	GACGTC	1 cut(s)	112
ZrmI	AGTACT	2 cut(s)	1290, 1324

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.