Encoded by
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 825 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 382 |
| Acc36I | ACCTGC | 1 cut(s) | 372 |
| Acc65I | GGTACC | 1 cut(s) | 1863 |
| AccB1I | GGYRCC | 1 cut(s) | 1863 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 301, 1537 |
| AccI | GTMKAC | 2 cut(s) | 850, 1402 |
| AccIII | TCCGGA | 1 cut(s) | 1555 |
| AciI | CCGC | 4 cut(s) | 223, 273, 1393, 1471 |
| AclWI | GGATC | 5 cut(s) | 26, 69, 921, 1686, 1830 |
| AcoI | YGGCCR | 3 cut(s) | 768, 806, 898 |
| AcsI | RAATTY | 3 cut(s) | 1167, 1458, 1633 |
| AcuI | CTGAAG | 2 cut(s) | 651, 1443 |
| AfaI | GTAC | 4 cut(s) | 709, 730, 1602, 1865 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 301, 907, 1380, 1537 |
| AflII | CTTAAG | 1 cut(s) | 971 |
| AflIII | ACRYGT | 1 cut(s) | 1597 |
| AjiI | CACGTC | 1 cut(s) | 854 |
| AleI | CACNNNNGTG | 1 cut(s) | 418 |
| Alw26I | GTCTC | 7 cut(s) | 245, 390, 629, 766, 1193, 1682, 1724 |
| AlwI | GGATC | 5 cut(s) | 26, 69, 921, 1686, 1830 |
| Ama87I | CYCGRG | 2 cut(s) | 350, 670 |
| Aor13HI | TCCGGA | 1 cut(s) | 1555 |
| AoxI | GGCC | 5 cut(s) | 264, 569, 768, 806, 898 |
| ApeKI | GCWGC | 3 cut(s) | 55, 334, 357 |
| ApoI | RAATTY | 3 cut(s) | 1167, 1458, 1633 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 203 |
| Asp718I | GGTACC | 1 cut(s) | 1863 |
| AspLEI | GCGC | 2 cut(s) | 357, 1785 |
| AspS9I | GGNCC | 1 cut(s) | 423 |
| AsuHPI | GGTGA | 8 cut(s) | 208, 262, 339, 405, 653, 730, 1006, 1212 |
| AvaI | CYCGRG | 2 cut(s) | 350, 670 |
| AvaII | GGWCC | 1 cut(s) | 423 |
| AxyI | CCTNAGG | 1 cut(s) | 885 |
| BaeGI | GKGCMC | 1 cut(s) | 248 |
| BaeI | ACNNNNGTAYC | 1 cut(s) | 1855 |
| BalI | TGGCCA | 2 cut(s) | 770, 808 |
| BanI | GGYRCC | 1 cut(s) | 1863 |
| BanII | GRGCYC | 1 cut(s) | 1078 |
| BbsI | GAAGAC | 2 cut(s) | 1293, 1842 |
| BbvCI | CCTCAGC | 1 cut(s) | 1379 |
| BbvI | GCAGC | 3 cut(s) | 42, 346, 369 |
| BccI | CCATC | 3 cut(s) | 124, 275, 798 |
| BceAI | ACGGC | 3 cut(s) | 68, 328, 802 |
| BcoDI | GTCTC | 7 cut(s) | 245, 390, 629, 766, 1193, 1682, 1724 |
| BfaI | CTAG | 2 cut(s) | 1268, 1592 |
| BfmI | CTRYAG | 2 cut(s) | 711, 1354 |
| BfrI | CTTAAG | 1 cut(s) | 971 |
| BfuAI | ACCTGC | 1 cut(s) | 372 |
| BisI | GCNGC | 5 cut(s) | 56, 223, 335, 358, 1394 |
| BlpI | GCTNAGC | 1 cut(s) | 780 |
| BlsI | GCNGC | 5 cut(s) | 57, 224, 336, 359, 1395 |
| BmcAI | AGTACT | 1 cut(s) | 709 |
| Bme18I | GGWCC | 1 cut(s) | 423 |
| BmeT110I | CYCGRG | 2 cut(s) | 350, 670 |
| BmgBI | CACGTC | 1 cut(s) | 854 |
| BmgT120I | GGNCC | 1 cut(s) | 423 |
| BmiI | GGNNCC | 1 cut(s) | 1865 |
| BmrI | ACTGGG | 1 cut(s) | 190 |
| BmsI | GCATC | 6 cut(s) | 330, 745, 804, 1039, 1393, 1593 |
| BmuI | ACTGGG | 1 cut(s) | 190 |
| BoxI | GACNNNNGTC | 1 cut(s) | 257 |
| BpiI | GAAGAC | 2 cut(s) | 1293, 1842 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 344, 376 |
| BpmI | CTGGAG | 1 cut(s) | 1194 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1379, 1628 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 780 |
| BpuEI | CTTGAG | 3 cut(s) | 164, 518, 1706 |
| Bsa29I | ATCGAT | 1 cut(s) | 1825 |
| BsaI | GGTCTC | 3 cut(s) | 245, 390, 766 |
| BsaJI | CCNNGG | 5 cut(s) | 669, 740, 809, 1108, 1536 |
| BsaWI | WCCGGW | 2 cut(s) | 415, 1555 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1192, 1222 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 301, 907, 1380, 1537 |
| Bse1I | ACTGG | 5 cut(s) | 185, 202, 316, 587, 1531 |
| Bse21I | CCTNAGG | 1 cut(s) | 885 |
| Bse3DI | GCAATG | 2 cut(s) | 1202, 1281 |
| BseAI | TCCGGA | 1 cut(s) | 1555 |
| BseCI | ATCGAT | 1 cut(s) | 1825 |
| BseDI | CCNNGG | 5 cut(s) | 669, 740, 809, 1108, 1536 |
| BseGI | GGATG | 4 cut(s) | 736, 819, 1584, 1771 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 301, 907, 1380, 1537 |
| BseMI | GCAATG | 2 cut(s) | 1202, 1281 |
| BseMII | CTCAG | 7 cut(s) | 59, 876, 1091, 1169, 1370, 1411, 1642 |
| BseNI | ACTGG | 5 cut(s) | 185, 202, 316, 587, 1531 |
| BseSI | GKGCMC | 1 cut(s) | 248 |
| BseXI | GCAGC | 3 cut(s) | 42, 346, 369 |
| BseYI | CCCAGC | 1 cut(s) | 1374 |
| BsgI | GTGCAG | 2 cut(s) | 76, 353 |
| BshFI | GGCC | 5 cut(s) | 266, 571, 770, 808, 900 |
| BshNI | GGYRCC | 1 cut(s) | 1863 |
| BshVI | ATCGAT | 1 cut(s) | 1825 |
| BsiHKCI | CYCGRG | 2 cut(s) | 350, 670 |
| BsiSI | CCGG | 3 cut(s) | 416, 901, 1556 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 301, 907, 1380, 1537 |
| BsmAI | GTCTC | 7 cut(s) | 245, 390, 629, 766, 1193, 1682, 1724 |
| BsmBI | CGTCTC | 1 cut(s) | 1724 |
| BsnI | GGCC | 5 cut(s) | 266, 571, 770, 808, 900 |
| Bso31I | GGTCTC | 3 cut(s) | 245, 390, 766 |
| BsoBI | CYCGRG | 2 cut(s) | 350, 670 |
| Bsp1286I | GDGCHC | 2 cut(s) | 248, 1078 |
| Bsp13I | TCCGGA | 1 cut(s) | 1555 |
| Bsp1407I | TGTACA | 1 cut(s) | 728 |
| Bsp143I | GATC | 8 cut(s) | 31, 61, 234, 913, 1174, 1366, 1678, 1822 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 780 |
| BspACI | CCGC | 4 cut(s) | 223, 273, 1393, 1471 |
| BspANI | GGCC | 5 cut(s) | 266, 571, 770, 808, 900 |
| BspCNI | CTCAG | 7 cut(s) | 60, 877, 1090, 1170, 1371, 1410, 1641 |
| BspDI | ATCGAT | 1 cut(s) | 1825 |
| BspEI | TCCGGA | 1 cut(s) | 1555 |
| BspHI | TCATGA | 2 cut(s) | 114, 1807 |
| BspLI | GGNNCC | 1 cut(s) | 1865 |
| BspMI | ACCTGC | 1 cut(s) | 372 |
| BspPI | GGATC | 5 cut(s) | 26, 69, 921, 1686, 1830 |
| BspT107I | GGYRCC | 1 cut(s) | 1863 |
| BspTI | CTTAAG | 1 cut(s) | 971 |
| BspTNI | GGTCTC | 3 cut(s) | 245, 390, 766 |
| BsrDI | GCAATG | 2 cut(s) | 1202, 1281 |
| BsrGI | TGTACA | 1 cut(s) | 728 |
| BsrI | ACTGG | 5 cut(s) | 185, 202, 316, 587, 1531 |
| BssECI | CCNNGG | 5 cut(s) | 669, 740, 809, 1108, 1536 |
| BssMI | GATC | 8 cut(s) | 31, 61, 234, 913, 1174, 1366, 1678, 1822 |
| BssNAI | GTATAC | 1 cut(s) | 1403 |
| BssT1I | CCWWGG | 3 cut(s) | 740, 809, 1536 |
| Bst1107I | GTATAC | 1 cut(s) | 1403 |
| Bst4CI | ACNGT | 7 cut(s) | 733, 925, 945, 1011, 1299, 1485, 1805 |
| Bst6I | CTCTTC | 2 cut(s) | 560, 627 |
| BstAFI | CTTAAG | 1 cut(s) | 971 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 340, 1523 |
| BstAUI | TGTACA | 1 cut(s) | 728 |
| BstC8I | GCNNGC | 4 cut(s) | 91, 161, 777, 1186 |
| BstF5I | GGATG | 4 cut(s) | 736, 819, 1584, 1771 |
| BstHHI | GCGC | 2 cut(s) | 357, 1785 |
| BstKTI | GATC | 8 cut(s) | 34, 64, 237, 916, 1177, 1369, 1681, 1825 |
| BstMAI | GTCTC | 7 cut(s) | 245, 390, 629, 766, 1193, 1682, 1724 |
| BstMBI | GATC | 8 cut(s) | 31, 61, 234, 913, 1174, 1366, 1678, 1822 |
| BstNSI | RCATGY | 5 cut(s) | 292, 779, 861, 1188, 1601 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 257 |
| BstSFI | CTRYAG | 2 cut(s) | 711, 1354 |
| BstSLI | GKGCMC | 1 cut(s) | 248 |
| BstV1I | GCAGC | 3 cut(s) | 42, 346, 369 |
| BstV2I | GAAGAC | 2 cut(s) | 1293, 1842 |
| BstX2I | RGATCY | 2 cut(s) | 31, 913 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 58 |
| BstYI | RGATCY | 2 cut(s) | 31, 913 |
| BstZ17I | GTATAC | 1 cut(s) | 1403 |
| Bsu15I | ATCGAT | 1 cut(s) | 1825 |
| Bsu36I | CCTNAGG | 1 cut(s) | 885 |
| BsuRI | GGCC | 5 cut(s) | 266, 571, 770, 808, 900 |
| BsuTUI | ATCGAT | 1 cut(s) | 1825 |
| BtrI | CACGTC | 1 cut(s) | 854 |
| BtsCI | GGATG | 4 cut(s) | 736, 819, 1584, 1771 |
| BtsIMutI | CAGTG | 2 cut(s) | 178, 738 |
| BveI | ACCTGC | 1 cut(s) | 372 |
| Cac8I | GCNNGC | 4 cut(s) | 91, 161, 777, 1186 |
| CciI | TCATGA | 2 cut(s) | 114, 1807 |
| CfoI | GCGC | 2 cut(s) | 357, 1785 |
| Cfr13I | GGNCC | 1 cut(s) | 423 |
| ClaI | ATCGAT | 1 cut(s) | 1825 |
| CseI | GACGC | 1 cut(s) | 1706 |
| Csp6I | GTAC | 4 cut(s) | 708, 729, 1601, 1864 |
| CviQI | GTAC | 4 cut(s) | 708, 729, 1601, 1864 |
| DpnI | GATC | 8 cut(s) | 33, 63, 236, 915, 1176, 1368, 1680, 1824 |
| DpnII | GATC | 8 cut(s) | 31, 61, 234, 913, 1174, 1366, 1678, 1822 |
| DraI | TTTAAA | 1 cut(s) | 1638 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 382 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 382 |
| EaeI | YGGCCR | 3 cut(s) | 768, 806, 898 |
| Eam1104I | CTCTTC | 2 cut(s) | 560, 627 |
| EarI | CTCTTC | 2 cut(s) | 560, 627 |
| EciI | GGCGGA | 1 cut(s) | 1460 |
| Eco130I | CCWWGG | 3 cut(s) | 740, 809, 1536 |
| Eco147I | AGGCCT | 1 cut(s) | 571 |
| Eco24I | GRGCYC | 1 cut(s) | 1078 |
| Eco31I | GGTCTC | 3 cut(s) | 245, 390, 766 |
| Eco32I | GATATC | 2 cut(s) | 1116, 1216 |
| Eco47I | GGWCC | 1 cut(s) | 423 |
| Eco57I | CTGAAG | 2 cut(s) | 651, 1443 |
| Eco81I | CCTNAGG | 1 cut(s) | 885 |
| Eco88I | CYCGRG | 2 cut(s) | 350, 670 |
| EcoRV | GATATC | 2 cut(s) | 1116, 1216 |
| EcoT14I | CCWWGG | 3 cut(s) | 740, 809, 1536 |
| EcoT22I | ATGCAT | 1 cut(s) | 703 |
| EcoT38I | GRGCYC | 1 cut(s) | 1078 |
| ErhI | CCWWGG | 3 cut(s) | 740, 809, 1536 |
| Esp3I | CGTCTC | 1 cut(s) | 1724 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 126, 158, 224, 256 |
| FauNDI | CATATG | 1 cut(s) | 753 |
| FblI | GTMKAC | 2 cut(s) | 850, 1402 |
| Fnu4HI | GCNGC | 5 cut(s) | 56, 223, 335, 358, 1394 |
| FokI | GGATG | 4 cut(s) | 723, 826, 1571, 1778 |
| FriOI | GRGCYC | 1 cut(s) | 1078 |
| Fsp4HI | GCNGC | 5 cut(s) | 56, 223, 335, 358, 1394 |
| FspBI | CTAG | 2 cut(s) | 1268, 1592 |
| GlaI | GCGC | 2 cut(s) | 356, 1784 |
| GluI | GCNGC | 5 cut(s) | 56, 223, 335, 358, 1394 |
| GsaI | CCCAGC | 1 cut(s) | 1378 |
| GsuI | CTGGAG | 1 cut(s) | 1194 |
| HaeIII | GGCC | 5 cut(s) | 266, 571, 770, 808, 900 |
| HapII | CCGG | 3 cut(s) | 416, 901, 1556 |
| HgaI | GACGC | 1 cut(s) | 1706 |
| HhaI | GCGC | 2 cut(s) | 357, 1785 |
| Hin6I | GCGC | 2 cut(s) | 355, 1783 |
| HinP1I | GCGC | 2 cut(s) | 355, 1783 |
| HindIII | AAGCTT | 2 cut(s) | 782, 1151 |
| HinfI | GANTC | 8 cut(s) | 365, 400, 551, 679, 797, 997, 1231, 1414 |
| HpaII | CCGG | 3 cut(s) | 416, 901, 1556 |
| HphI | GGTGA | 8 cut(s) | 208, 262, 339, 405, 653, 730, 1006, 1212 |
| Hpy166II | GTNNAC | 5 cut(s) | 199, 321, 851, 937, 1403 |
| Hpy188I | TCNGA | 8 cut(s) | 69, 364, 427, 462, 1080, 1109, 1179, 1255 |
| Hpy8I | GTNNAC | 5 cut(s) | 199, 321, 851, 937, 1403 |
| Hpy99I | CGWCG | 2 cut(s) | 89, 263 |
| HpyAV | CCTTC | 7 cut(s) | 1046, 1146, 1316, 1337, 1447, 1537, 1756 |
| HpyCH4III | ACNGT | 7 cut(s) | 733, 925, 945, 1011, 1299, 1485, 1805 |
| HpyCH4IV | ACGT | 1 cut(s) | 853 |
| HpyCH4V | TGCA | 6 cut(s) | 93, 334, 701, 736, 857, 1859 |
| HpySE526I | ACGT | 1 cut(s) | 853 |
| HspAI | GCGC | 2 cut(s) | 355, 1783 |
| Kpn2I | TCCGGA | 1 cut(s) | 1555 |
| KpnI | GGTACC | 1 cut(s) | 1867 |
| Kzo9I | GATC | 8 cut(s) | 31, 61, 234, 913, 1174, 1366, 1678, 1822 |
| LmnI | GCTCC | 3 cut(s) | 184, 304, 462 |
| Lsp1109I | GCAGC | 3 cut(s) | 42, 346, 369 |
| LweI | GCATC | 6 cut(s) | 330, 745, 804, 1039, 1393, 1593 |
| MaeI | CTAG | 2 cut(s) | 1268, 1592 |
| MaeII | ACGT | 1 cut(s) | 853 |
| MaeIII | GTNAC | 4 cut(s) | 345, 411, 604, 1259 |
| MalI | GATC | 8 cut(s) | 33, 63, 236, 915, 1176, 1368, 1680, 1824 |
| MboI | GATC | 8 cut(s) | 31, 61, 234, 913, 1174, 1366, 1678, 1822 |
| MboII | GAAGA | 8 cut(s) | 146, 452, 577, 644, 1058, 1131, 1293, 1847 |
| MflI | RGATCY | 2 cut(s) | 31, 913 |
| MhlI | GDGCHC | 2 cut(s) | 248, 1078 |
| MlsI | TGGCCA | 2 cut(s) | 770, 808 |
| MluNI | TGGCCA | 2 cut(s) | 770, 808 |
| MlyI | GAGTC | 2 cut(s) | 374, 409 |
| Mox20I | TGGCCA | 2 cut(s) | 770, 808 |
| Mph1103I | ATGCAT | 1 cut(s) | 703 |
| MroI | TCCGGA | 1 cut(s) | 1555 |
| MroXI | GAANNNNTTC | 1 cut(s) | 203 |
| MscI | TGGCCA | 2 cut(s) | 770, 808 |
| MseI | TTAA | 4 cut(s) | 431, 512, 972, 1637 |
| MslI | CAYNNNNRTG | 1 cut(s) | 418 |
| Msp20I | TGGCCA | 2 cut(s) | 770, 808 |
| MspA1I | CMGCKG | 3 cut(s) | 337, 629, 1378 |
| MspCI | CTTAAG | 1 cut(s) | 971 |
| MspI | CCGG | 3 cut(s) | 416, 901, 1556 |
| NdeI | CATATG | 1 cut(s) | 753 |
| NdeII | GATC | 8 cut(s) | 31, 61, 234, 913, 1174, 1366, 1678, 1822 |
| NlaIV | GGNNCC | 1 cut(s) | 1865 |
| NmeAIII | GCCGAG | 1 cut(s) | 1001 |
| NmuCI | GTSAC | 3 cut(s) | 345, 411, 604 |
| NsiI | ATGCAT | 1 cut(s) | 703 |
| NspI | RCATGY | 5 cut(s) | 292, 779, 861, 1188, 1601 |
| OliI | CACNNNNGTG | 1 cut(s) | 418 |
| PaeI | GCATGC | 2 cut(s) | 779, 1188 |
| PagI | TCATGA | 2 cut(s) | 114, 1807 |
| PceI | AGGCCT | 1 cut(s) | 571 |
| PciI | ACATGT | 1 cut(s) | 1597 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1251 |
| PdmI | GAANNNNTTC | 1 cut(s) | 203 |
| PfeI | GAWTC | 6 cut(s) | 551, 679, 797, 997, 1231, 1414 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 301, 1537 |
| PkrI | GCNGC | 5 cut(s) | 57, 224, 336, 359, 1395 |
| PleI | GAGTC | 2 cut(s) | 373, 408 |
| PpsI | GAGTC | 2 cut(s) | 373, 408 |
| PscI | ACATGT | 1 cut(s) | 1597 |
| PshAI | GACNNNNGTC | 1 cut(s) | 257 |
| PsiI | TTATAA | 1 cut(s) | 825 |
| PspFI | CCCAGC | 1 cut(s) | 1374 |
| PspN4I | GGNNCC | 1 cut(s) | 1865 |
| PspPI | GGNCC | 1 cut(s) | 423 |
| PsuI | RGATCY | 2 cut(s) | 31, 913 |
| PvuII | CAGCTG | 3 cut(s) | 337, 629, 1378 |
| RsaI | GTAC | 4 cut(s) | 709, 730, 1602, 1865 |
| RsaNI | GTAC | 4 cut(s) | 708, 729, 1601, 1864 |
| RseI | CAYNNNNRTG | 1 cut(s) | 418 |
| SaqAI | TTAA | 4 cut(s) | 431, 512, 972, 1637 |
| SatI | GCNGC | 5 cut(s) | 56, 223, 335, 358, 1394 |
| Sau3AI | GATC | 8 cut(s) | 31, 61, 234, 913, 1174, 1366, 1678, 1822 |
| Sau96I | GGNCC | 1 cut(s) | 423 |
| ScaI | AGTACT | 1 cut(s) | 709 |
| SchI | GAGTC | 2 cut(s) | 374, 409 |
| SduI | GDGCHC | 2 cut(s) | 248, 1078 |
| SfaNI | GCATC | 6 cut(s) | 330, 745, 804, 1039, 1393, 1593 |
| SfcI | CTRYAG | 2 cut(s) | 711, 1354 |
| SinI | GGWCC | 1 cut(s) | 423 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 418 |
| SmlI | CTYRAG | 4 cut(s) | 143, 497, 971, 1721 |
| SmoI | CTYRAG | 4 cut(s) | 143, 497, 971, 1721 |
| SphI | GCATGC | 2 cut(s) | 779, 1188 |
| SseBI | AGGCCT | 1 cut(s) | 571 |
| SsiI | CCGC | 4 cut(s) | 223, 273, 1393, 1471 |
| SspI | AATATT | 1 cut(s) | 540 |
| SspMI | CTAG | 2 cut(s) | 1268, 1592 |
| StuI | AGGCCT | 1 cut(s) | 571 |
| StyI | CCWWGG | 3 cut(s) | 740, 809, 1536 |
| TaaI | ACNGT | 7 cut(s) | 733, 925, 945, 1011, 1299, 1485, 1805 |
| TaiI | ACGT | 1 cut(s) | 856 |
| TaqI | TCGA | 7 cut(s) | 228, 261, 438, 795, 1044, 1245, 1825 |
| TatI | WGTACW | 2 cut(s) | 707, 728 |
| TauI | GCSGC | 2 cut(s) | 225, 1396 |
| TfiI | GAWTC | 6 cut(s) | 551, 679, 797, 997, 1231, 1414 |
| Tru1I | TTAA | 4 cut(s) | 431, 512, 972, 1637 |
| Tru9I | TTAA | 4 cut(s) | 431, 512, 972, 1637 |
| TscAI | CASTG | 2 cut(s) | 185, 738 |
| TseFI | GTSAC | 3 cut(s) | 345, 411, 604 |
| TseI | GCWGC | 3 cut(s) | 55, 334, 357 |
| Tsp45I | GTSAC | 3 cut(s) | 345, 411, 604 |
| TspDTI | ATGAA | 7 cut(s) | 34, 196, 504, 671, 989, 1065, 1848 |
| TspGWI | ACGGA | 2 cut(s) | 247, 263 |
| TspRI | CASTG | 2 cut(s) | 185, 738 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 301, 1537 |
| Vha464I | CTTAAG | 1 cut(s) | 971 |
| VpaK11BI | GGWCC | 1 cut(s) | 423 |
| XapI | RAATTY | 3 cut(s) | 1167, 1458, 1633 |
| XceI | RCATGY | 5 cut(s) | 292, 779, 861, 1188, 1601 |
| XmiI | GTMKAC | 2 cut(s) | 850, 1402 |
| XmnI | GAANNNNTTC | 1 cut(s) | 203 |
| XspI | CTAG | 2 cut(s) | 1268, 1592 |
| ZrmI | AGTACT | 1 cut(s) | 709 |
| Zsp2I | ATGCAT | 1 cut(s) | 703 |