Rorug02G0431400

disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000917
Physical Location & Seq
Reverse (-)
55296974 .. 55302269
5296 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0431400.1

Sequence Viewer

Length: 2238 bp
ATGCCCGGCGAAGACATGGACCACCGCAAAGAGAGAATGAAGAGCGACTGCAAGAAGATCATGGACAGCATAAACGCAATGTGCTTCGAAAACCTAAACGACGAGCAGGTGCACTCGCTCGTGATGATGAGGGAAATCGCGCGCGGAGTTGTGGACAATCGAGTCGGGAAGGTCTCCAACAGCGACGTCAAGAAGGCTCTGTCTTCCAGCATTGAGAAGATGGTGGAGTCGTGTAGGGATGTGGTGAACATATTGGGGAGGATTTCGTGTGAGGGATTAGGTGAGGAGGAGTTTCAGAAGCTGGTGAGGATGAAGGAGATTGCAATGGGGATTGTGTTGAAACGATCCACGGCCGTGGCCGCCTTGGGTGGTGAAGAACAGGCTGATGGAGGCGATGATGTTGGAAGCGAGAAGGATATGTACAGTGGAGGAGTGGAAGTTGAGTCGAGGAGTGAAGATGATCAGAATGAGGTGCGGCAGGGCGTTGTGGATGGGGAGACACACACGTGGAATGGGTATGTACCGATTATTGAAGGGGCGGGAGAAGAGAGGAAGATGGTGGAGGATTATCATGAAGTGGTTTTGAGAGATGAAGATGCTTGGAATGTGGGGCGGGGAAGTGTGGTTGAGGGGATGAGGGATGCTGGCCATCAGGAGCAGAGTAGGAGGGTAGAAGGGTTGATGTTTGAAGATGACTGCCTCGTGGTGGTATCGGAGTTTGAAACTCAAGATGTGAAAAGTGAGGTGCAAAAATCTTGGTCACCGGAAACCCCTCAGATCCCTATTTCATGGCCTTCAGATGACGTGATAAACTTACAGTGGGTGCAGGACATGATGTTTAATATTGAGCAGTCTTCGTATGGTGGTGAGTCACCAATGAGATTTTGTGATTTAATTCCAGTTCCTTTGGTGGATAAATTAATCGACACAGCTACAAGTATCCTTTGCAAGGAGCCAAATTGTGTGCAAGTTGATTGCCAAGGAGAGGATTCAAGAGTTGTTGTAGTTGGCGACATTTATGGACAGTTTCATGATTTACTGCATCTCTTTGAACATGCCGGGTTGCCCTCTGACAACCAGTTGTATGTTTTTAATGGAAATTATGTTGACAGAGGAGCACGGGGCTTGGATGTCTTTCTCGTCTTACTGGCTTGGAAGGTCTTGATGCCCAGTAGAGTATATCTACTCCGTGGAAACCATGAATCTAGATATTGTACATTTCTGTATGGTTTTGAGGAGGAGGTCAAGACTAAATTCGGTGAACATGGTGAATATGTCTATAATAAATGCCTCGACTGCTTTAAAGAGCTTCCTCTGGCTTCAGTCATAGCCAATTCTGCATATACCACACATGGAGGTCTTTTCCGGAGTATTACCTCTTCGAGAAAGTCGAAAAGAAAGAGGGAGGAAAGCCTTGAACTGGGTTCTCTAGAAGATTTATCTAAAGTTAAAAGATCTCTTATAGATGCGCCTGATGTAGGTCCGAATGTATTACTCACTGACGTACTATGGTCAGATCCATCAAAGCAAGATGGTCTAGTTGAAAAGACATTTCGAGAACGAGGTCTTTGGTGGGGTCCTGACTGCACTGAGGCTTTTCTAAAACAATCCAACTTGAAGCTGATCATACGATCACATGAAGGTCCAGATGTAAGGGAAGATCAAGATGACTTTGGTGACATGCTAAGTGGTTATAGTGTGGATCATGTAGGAGATTCAGGGAAGCTATACACTTTGTTTAGTGCTCCGGATTACCCACAGTGTGGTGAAAAGAGATATAACAACAAAGGAGTCTATGCTGTATTGAAACCTCCTAATTTTGAAAGTCCTTCATTCCACTCATTCAAGGATGTAGGAAGGCCACAGGCCGATGCTGATGGAGATAATGATCTGGTCATTGTTGATAAACCAAGCTCAGTAACATCGCCTGCAACTGGTGCCGCTTCTTTGTCTCTAGCTTCTGTTAGTTCTGAGGTTGACTTCAAGACGTTAGGCATTTCTAACCCCCCTTCTTCAAGTGTTATGATGGGGGATGGTGCAGGCGGCACTGAACTTGTCCAAGTTCCGAAGGCTCCTGTGGTAGAAGGATTGCCTCTGCCTTCGGAGTTACAGGAGCCTCACAAGGCTGCTTACAAGTACTTCTTGGAGCTTATTGCTGGCCTGAAGCATATGGTTTCAACAAGGGAGGTTCAGACCCGGCCCATGAATGAGCCATGCAAAAGTGAGCTCGACATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

745

Amino Acids

82.83

Weight (kDa)

4.77

Isoelectric Point (pI)

44.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 332 - 547 2.3e-27 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 97
AasI GACNNNNNNGTC 1 cut(s) 161
AatII GACGTC 1 cut(s) 189
Acc36I ACCTGC 1 cut(s) 97
AccB1I GGYRCC 1 cut(s) 1937
AccB7I CCANNNNNTGG 1 cut(s) 1763
AccII CGCG 3 cut(s) 140, 142, 144
AccIII TCCGGA 2 cut(s) 1365, 1747
AciI CCGC 8 cut(s) 25, 144, 360, 475, 539, 613, 1941, 2043
AclWI GGATC 4 cut(s) 339, 772, 1511, 1710
AcoI YGGCCR 3 cut(s) 351, 357, 646
AcsI RAATTY 1 cut(s) 1253
AcuI CTGAAG 3 cut(s) 780, 1305, 2183
AcvI CACGTG 1 cut(s) 507
AcyI GRCGYC 1 cut(s) 186
AdeI CACNNNGTG 1 cut(s) 1763
AfaI GTAC 5 cut(s) 422, 522, 1216, 1506, 2138
AfiI CCNNNNNNNGG 7 cut(s) 706, 949, 985, 1420, 1478, 1763, 1934
AflIII ACRYGT 1 cut(s) 504
AjiI CACGTC 1 cut(s) 805
AleI CACNNNNGTG 2 cut(s) 353, 505
AluBI AGCT 9 cut(s) 301, 932, 1309, 1621, 1726, 1914, 1958, 2149, 2227
AluI AGCT 9 cut(s) 301, 932, 1309, 1621, 1726, 1914, 1958, 2149, 2227
Alw21I GWGCWC 4 cut(s) 114, 1120, 1747, 2229
Alw26I GTCTC 3 cut(s) 178, 491, 1956
Alw44I GTGCAC 1 cut(s) 110
AlwI GGATC 4 cut(s) 339, 772, 1511, 1710
AlwNI CAGNNNCTG 1 cut(s) 301
Aor13HI TCCGGA 2 cut(s) 1365, 1747
AoxI GGCC 8 cut(s) 351, 357, 646, 791, 1859, 1866, 2158, 2198
ApaLI GTGCAC 1 cut(s) 110
ApeKI GCWGC 1 cut(s) 2126
ApoI RAATTY 1 cut(s) 1253
AseI ATTAAT 1 cut(s) 920
AspLEI GCGC 3 cut(s) 142, 144, 1471
AspS9I GGNCC 5 cut(s) 19, 1481, 1577, 1643, 2199
AsuC2I CCSGG 3 cut(s) 6, 1060, 2197
AsuII TTCGAA 1 cut(s) 87
AvaII GGWCC 4 cut(s) 19, 1481, 1577, 1643
BaeGI GKGCMC 1 cut(s) 114
BalI TGGCCA 1 cut(s) 648
BanI GGYRCC 1 cut(s) 1937
BanII GRGCYC 1 cut(s) 2229
BarI GAAGNNNNNNTAC 4 cut(s) 404, 436, 1363, 1395
BauI CACGAG 2 cut(s) 119, 701
BbrPI CACGTG 1 cut(s) 507
BbsI GAAGAC 3 cut(s) 18, 195, 846
Bbv12I GWGCWC 4 cut(s) 114, 1120, 1747, 2229
BbvI GCAGC 1 cut(s) 2113
BceAI ACGGC 2 cut(s) 338, 366
BciVI GTATCC 1 cut(s) 950
BclI TGATCA 2 cut(s) 460, 1623
BcnI CCSGG 3 cut(s) 6, 1060, 2197
BcoDI GTCTC 3 cut(s) 178, 491, 1956
BfaI CTAG 4 cut(s) 1206, 1430, 1538, 1955
BfuAI ACCTGC 1 cut(s) 97
BfuI GTATCC 1 cut(s) 950
BglII AGATCT 1 cut(s) 1454
BisI GCNGC 5 cut(s) 360, 476, 1941, 2044, 2127
BlsI GCNGC 5 cut(s) 361, 477, 1942, 2045, 2128
BmcAI AGTACT 1 cut(s) 2138
Bme1390I CCNGG 3 cut(s) 6, 1060, 2197
Bme18I GGWCC 4 cut(s) 19, 1481, 1577, 1643
BmgBI CACGTC 1 cut(s) 805
BmgT120I GGNCC 5 cut(s) 19, 1481, 1577, 1643, 2199
BmiI GGNNCC 5 cut(s) 954, 1578, 1939, 2073, 2115
BmrFI CCNGG 3 cut(s) 6, 1060, 2197
BmrI ACTGGG 2 cut(s) 1164, 1430
BmsI GCATC 6 cut(s) 586, 631, 1051, 1155, 1456, 1861
BmuI ACTGGG 2 cut(s) 1164, 1430
BpiI GAAGAC 3 cut(s) 18, 195, 846
Bpu14I TTCGAA 1 cut(s) 87
BpuEI CTTGAG 1 cut(s) 711
BpuMI CCSGG 3 cut(s) 6, 1060, 2197
BsaAI YACGTR 1 cut(s) 507
BsaBI GATNNNNATC 1 cut(s) 1887
BsaHI GRCGYC 1 cut(s) 186
BsaI GGTCTC 1 cut(s) 178
BsaJI CCNNGG 5 cut(s) 348, 354, 363, 979, 1189
BsaWI WCCGGW 3 cut(s) 763, 1365, 1747
BsaXI ACNNNNNCTCC 2 cut(s) 423, 453
Bsc4I CCNNNNNNNGG 7 cut(s) 706, 949, 985, 1420, 1478, 1763, 1934
Bse1I ACTGG 6 cut(s) 899, 1078, 1152, 1170, 1425, 1939
Bse3DI GCAATG 2 cut(s) 84, 330
Bse8I GATNNNNATC 1 cut(s) 1887
BseAI TCCGGA 2 cut(s) 1365, 1747
BseDI CCNNGG 5 cut(s) 348, 354, 363, 979, 1189
BseGI GGATG 8 cut(s) 244, 315, 496, 639, 646, 1135, 1855, 2038
BseJI GATNNNNATC 1 cut(s) 1887
BseLI CCNNNNNNNGG 7 cut(s) 706, 949, 985, 1420, 1478, 1763, 1934
BseMI GCAATG 2 cut(s) 84, 330
BseMII CTCAG 4 cut(s) 788, 1581, 1929, 1962
BseNI ACTGG 6 cut(s) 899, 1078, 1152, 1170, 1425, 1939
BsePI GCGCGC 1 cut(s) 140
BseRI GAGGAG 7 cut(s) 299, 302, 444, 463, 1128, 1250, 1253
BseSI GKGCMC 1 cut(s) 114
BseX3I CGGCCG 1 cut(s) 351
BseXI GCAGC 1 cut(s) 2113
BsgI GTGCAG 3 cut(s) 845, 1570, 2058
Bsh1236I CGCG 3 cut(s) 140, 142, 144
Bsh1285I CGRYCG 1 cut(s) 354
BshFI GGCC 8 cut(s) 353, 359, 648, 793, 1861, 1868, 2160, 2200
BshNI GGYRCC 1 cut(s) 1937
BsiEI CGRYCG 1 cut(s) 354
BsiHKAI GWGCWC 4 cut(s) 114, 1120, 1747, 2229
BsiSI CCGG 6 cut(s) 6, 764, 1059, 1366, 1748, 2197
BslI CCNNNNNNNGG 7 cut(s) 706, 949, 985, 1420, 1478, 1763, 1934
BsmAI GTCTC 3 cut(s) 178, 491, 1956
BsnI GGCC 8 cut(s) 353, 359, 648, 793, 1861, 1868, 2160, 2200
Bso31I GGTCTC 1 cut(s) 178
Bsp119I TTCGAA 1 cut(s) 87
Bsp1286I GDGCHC 4 cut(s) 114, 1120, 1747, 2229
Bsp13I TCCGGA 2 cut(s) 1365, 1747
Bsp1407I TGTACA 2 cut(s) 420, 1214
BspACI CCGC 8 cut(s) 25, 144, 360, 475, 539, 613, 1941, 2043
BspANI GGCC 8 cut(s) 353, 359, 648, 793, 1861, 1868, 2160, 2200
BspCNI CTCAG 4 cut(s) 787, 1582, 1928, 1963
BspEI TCCGGA 2 cut(s) 1365, 1747
BspFNI CGCG 3 cut(s) 140, 142, 144
BspHI TCATGA 2 cut(s) 571, 1030
BspLI GGNNCC 5 cut(s) 954, 1578, 1939, 2073, 2115
BspMI ACCTGC 1 cut(s) 97
BspPI GGATC 4 cut(s) 339, 772, 1511, 1710
BspQI GCTCTTC 1 cut(s) 35
BspT104I TTCGAA 1 cut(s) 87
BspT107I GGYRCC 1 cut(s) 1937
BspTNI GGTCTC 1 cut(s) 178
BsrDI GCAATG 2 cut(s) 84, 330
BsrGI TGTACA 2 cut(s) 420, 1214
BsrI ACTGG 6 cut(s) 899, 1078, 1152, 1170, 1425, 1939
BssECI CCNNGG 5 cut(s) 348, 354, 363, 979, 1189
BssHII GCGCGC 1 cut(s) 140
BssNI GRCGYC 1 cut(s) 186
BssSI CACGAG 2 cut(s) 119, 701
BssT1I CCWWGG 2 cut(s) 363, 979
Bst2BI CACGAG 2 cut(s) 119, 701
Bst4CI ACNGT 4 cut(s) 425, 819, 1026, 1761
Bst6I CTCTTC 3 cut(s) 35, 540, 1384
BstACI GRCGYC 1 cut(s) 186
BstAPI GCANNNNNTGC 1 cut(s) 1937
BstAUI TGTACA 2 cut(s) 420, 1214
BstBAI YACGTR 1 cut(s) 507
BstBI TTCGAA 1 cut(s) 87
BstC8I GCNNGC 5 cut(s) 142, 646, 1929, 2041, 2158
BstDEI CTNAG 5 cut(s) 774, 1590, 1685, 1915, 1971
BstDSI CCRYGG 3 cut(s) 348, 354, 1189
BstEII GGTNACC 1 cut(s) 759
BstENI CCTNNNNNAGG 2 cut(s) 947, 1476
BstF5I GGATG 8 cut(s) 244, 315, 496, 639, 646, 1135, 1855, 2038
BstFNI CGCG 3 cut(s) 140, 142, 144
BstHHI GCGC 3 cut(s) 142, 144, 1471
BstMAI GTCTC 3 cut(s) 178, 491, 1956
BstMCI CGRYCG 1 cut(s) 354
BstMWI GCNNNNNNNGC 4 cut(s) 359, 1296, 1337, 1937
BstNSI RCATGY 2 cut(s) 1058, 1684
BstPI GGTNACC 1 cut(s) 759
BstSCI CCNGG 3 cut(s) 4, 1058, 2195
BstSLI GKGCMC 1 cut(s) 114
BstUI CGCG 3 cut(s) 140, 142, 144
BstV1I GCAGC 1 cut(s) 2113
BstV2I GAAGAC 3 cut(s) 18, 195, 846
BstX2I RGATCY 3 cut(s) 777, 1454, 1516
BstXI CCANNNNNNTGG 1 cut(s) 355
BstYI RGATCY 3 cut(s) 777, 1454, 1516
BstZI CGGCCG 1 cut(s) 351
BsuI GTATCC 1 cut(s) 950
BsuRI GGCC 8 cut(s) 353, 359, 648, 793, 1861, 1868, 2160, 2200
BtgI CCRYGG 3 cut(s) 348, 354, 1189
BtgZI GCGATG 2 cut(s) 408, 1908
BtrI CACGTC 1 cut(s) 805
BtsCI GGATG 8 cut(s) 244, 315, 496, 639, 646, 1135, 1855, 2038
BtsIMutI CAGTG 6 cut(s) 430, 824, 1497, 1587, 1766, 2046
BveI ACCTGC 1 cut(s) 97
Cac8I GCNNGC 5 cut(s) 142, 646, 1929, 2041, 2158
CaiI CAGNNNCTG 1 cut(s) 301
CciI TCATGA 2 cut(s) 571, 1030
CfoI GCGC 3 cut(s) 142, 144, 1471
Cfr13I GGNCC 5 cut(s) 19, 1481, 1577, 1643, 2199
Csp6I GTAC 5 cut(s) 421, 521, 1215, 1505, 2137
CviQI GTAC 5 cut(s) 421, 521, 1215, 1505, 2137
DdeI CTNAG 5 cut(s) 774, 1590, 1685, 1915, 1971
DraI TTTAAA 1 cut(s) 1303
DraIII CACNNNGTG 1 cut(s) 1763
DrdI GACNNNNNNGTC 1 cut(s) 161
DseDI GACNNNNNNGTC 1 cut(s) 161
EaeI YGGCCR 3 cut(s) 351, 357, 646
EagI CGGCCG 1 cut(s) 351
Eam1104I CTCTTC 3 cut(s) 35, 540, 1384
EarI CTCTTC 3 cut(s) 35, 540, 1384
Ecl136II GAGCTC 1 cut(s) 2227
EclXI CGGCCG 1 cut(s) 351
Eco130I CCWWGG 2 cut(s) 363, 979
Eco24I GRGCYC 1 cut(s) 2229
Eco31I GGTCTC 1 cut(s) 178
Eco47I GGWCC 4 cut(s) 19, 1481, 1577, 1643
Eco52I CGGCCG 1 cut(s) 351
Eco53kI GAGCTC 1 cut(s) 2227
Eco57I CTGAAG 3 cut(s) 780, 1305, 2183
Eco72I CACGTG 1 cut(s) 507
Eco91I GGTNACC 1 cut(s) 759
EcoICRI GAGCTC 1 cut(s) 2227
EcoNI CCTNNNNNAGG 2 cut(s) 947, 1476
EcoO109I RGGNCCY 1 cut(s) 1577
EcoO65I GGTNACC 1 cut(s) 759
EcoT14I CCWWGG 2 cut(s) 363, 979
EcoT38I GRGCYC 1 cut(s) 2229
ErhI CCWWGG 2 cut(s) 363, 979
FalI AAGNNNNNCTT 2 cut(s) 2126, 2158
FauI CCCGC 2 cut(s) 532, 606
FauNDI CATATG 1 cut(s) 2169
FbaI TGATCA 2 cut(s) 460, 1623
Fnu4HI GCNGC 5 cut(s) 360, 476, 1941, 2044, 2127
FokI GGATG 8 cut(s) 251, 322, 503, 646, 653, 1142, 1862, 2045
FriOI GRGCYC 1 cut(s) 2229
Fsp4HI GCNGC 5 cut(s) 360, 476, 1941, 2044, 2127
FspBI CTAG 4 cut(s) 1206, 1430, 1538, 1955
GlaI GCGC 3 cut(s) 141, 143, 1470
GluI GCNGC 5 cut(s) 360, 476, 1941, 2044, 2127
HaeIII GGCC 8 cut(s) 353, 359, 648, 793, 1861, 1868, 2160, 2200
HapII CCGG 6 cut(s) 6, 764, 1059, 1366, 1748, 2197
HhaI GCGC 3 cut(s) 142, 144, 1471
Hin1I GRCGYC 1 cut(s) 186
Hin6I GCGC 3 cut(s) 140, 142, 1469
HinP1I GCGC 3 cut(s) 140, 142, 1469
HincII GTYRAC 2 cut(s) 1108, 1978
HindII GTYRAC 2 cut(s) 1108, 1978
HinfI GANTC 8 cut(s) 162, 227, 443, 869, 989, 1202, 1715, 1791
HpaII CCGG 6 cut(s) 6, 764, 1059, 1366, 1748, 2197
Hpy166II GTNNAC 6 cut(s) 112, 154, 247, 1108, 1262, 1978
Hpy8I GTNNAC 6 cut(s) 112, 154, 247, 1108, 1262, 1978
Hpy99I CGWCG 2 cut(s) 104, 188
HpyCH4III ACNGT 4 cut(s) 425, 819, 1026, 1761
HpyCH4IV ACGT 5 cut(s) 186, 506, 804, 1503, 1988
HpyF10VI GCNNNNNNNGC 4 cut(s) 359, 1296, 1337, 1937
HpyF3I CTNAG 5 cut(s) 774, 1590, 1685, 1915, 1971
HpySE526I ACGT 5 cut(s) 186, 506, 804, 1503, 1988
Hsp92I GRCGYC 1 cut(s) 186
HspAI GCGC 3 cut(s) 140, 142, 1469
Kpn2I TCCGGA 2 cut(s) 1365, 1747
Ksp22I TGATCA 2 cut(s) 460, 1623
LguI GCTCTTC 1 cut(s) 35
LmnI GCTCC 7 cut(s) 655, 952, 1115, 1750, 2077, 2113, 2146
Lsp1109I GCAGC 1 cut(s) 2113
LweI GCATC 6 cut(s) 586, 631, 1051, 1155, 1456, 1861
MaeI CTAG 4 cut(s) 1206, 1430, 1538, 1955
MaeII ACGT 5 cut(s) 186, 506, 804, 1503, 1988
MaeIII GTNAC 5 cut(s) 759, 870, 1676, 1918, 2106
MauBI CGCGCGCG 1 cut(s) 140
MflI RGATCY 3 cut(s) 777, 1454, 1516
MhlI GDGCHC 4 cut(s) 114, 1120, 1747, 2229
MlsI TGGCCA 1 cut(s) 648
MluCI AATT 7 cut(s) 894, 917, 958, 1099, 1253, 1333, 1816
MluNI TGGCCA 1 cut(s) 648
MlyI GAGTC 5 cut(s) 171, 236, 452, 878, 1800
MmeI TCCRAC 3 cut(s) 201, 382, 1635
Mox20I TGGCCA 1 cut(s) 648
MroI TCCGGA 2 cut(s) 1365, 1747
MscI TGGCCA 1 cut(s) 648
MseI TTAA 6 cut(s) 840, 893, 920, 1092, 1302, 1449
MslI CAYNNNNRTG 2 cut(s) 353, 505
Msp20I TGGCCA 1 cut(s) 648
MspI CCGG 6 cut(s) 6, 764, 1059, 1366, 1748, 2197
MspR9I CCNGG 3 cut(s) 6, 1060, 2197
MvnI CGCG 3 cut(s) 140, 142, 144
MwoI GCNNNNNNNGC 4 cut(s) 359, 1296, 1337, 1937
NciI CCSGG 3 cut(s) 6, 1060, 2197
NdeI CATATG 1 cut(s) 2169
NlaIV GGNNCC 5 cut(s) 954, 1578, 1939, 2073, 2115
NmuCI GTSAC 3 cut(s) 759, 870, 1676
NspI RCATGY 2 cut(s) 1058, 1684
NspV TTCGAA 1 cut(s) 87
OliI CACNNNNGTG 2 cut(s) 353, 505
PagI TCATGA 2 cut(s) 571, 1030
PaqCI CACCTGC 1 cut(s) 97
PauI GCGCGC 1 cut(s) 140
PciSI GCTCTTC 1 cut(s) 35
PcsI WCGNNNNNNNCGW 1 cut(s) 1388
PfeI GAWTC 3 cut(s) 989, 1202, 1715
PflMI CCANNNNNTGG 1 cut(s) 1763
PkrI GCNGC 5 cut(s) 361, 477, 1942, 2045, 2128
PleI GAGTC 5 cut(s) 170, 235, 451, 877, 1799
PmaCI CACGTG 1 cut(s) 507
PmlI CACGTG 1 cut(s) 507
PpsI GAGTC 5 cut(s) 170, 235, 451, 877, 1799
Ppu21I YACGTR 1 cut(s) 507
PpuMI RGGWCCY 1 cut(s) 1577
PshBI ATTAAT 1 cut(s) 920
Psp124BI GAGCTC 1 cut(s) 2229
Psp5II RGGWCCY 1 cut(s) 1577
PspCI CACGTG 1 cut(s) 507
PspEI GGTNACC 1 cut(s) 759
PspN4I GGNNCC 5 cut(s) 954, 1578, 1939, 2073, 2115
PspPI GGNCC 5 cut(s) 19, 1481, 1577, 1643, 2199
PspPPI RGGWCCY 1 cut(s) 1577
PstNI CAGNNNCTG 1 cut(s) 301
PsuI RGATCY 3 cut(s) 777, 1454, 1516
PteI GCGCGC 1 cut(s) 140
RsaI GTAC 5 cut(s) 422, 522, 1216, 1506, 2138
RsaNI GTAC 5 cut(s) 421, 521, 1215, 1505, 2137
RseI CAYNNNNRTG 2 cut(s) 353, 505
SacI GAGCTC 1 cut(s) 2229
SapI GCTCTTC 1 cut(s) 35
SaqAI TTAA 6 cut(s) 840, 893, 920, 1092, 1302, 1449
SatI GCNGC 5 cut(s) 360, 476, 1941, 2044, 2127
Sau96I GGNCC 5 cut(s) 19, 1481, 1577, 1643, 2199
ScaI AGTACT 1 cut(s) 2138
SchI GAGTC 5 cut(s) 171, 236, 452, 878, 1800
ScrFI CCNGG 3 cut(s) 6, 1060, 2197
SduI GDGCHC 4 cut(s) 114, 1120, 1747, 2229
SfaNI GCATC 6 cut(s) 586, 631, 1051, 1155, 1456, 1861
SfuI TTCGAA 1 cut(s) 87
SinI GGWCC 4 cut(s) 19, 1481, 1577, 1643
SmiMI CAYNNNNRTG 2 cut(s) 353, 505
SmlI CTYRAG 1 cut(s) 726
SmoI CTYRAG 1 cut(s) 726
Sse9I AATT 7 cut(s) 894, 917, 958, 1099, 1253, 1333, 1816
SsiI CCGC 8 cut(s) 25, 144, 360, 475, 539, 613, 1941, 2043
SspI AATATT 1 cut(s) 844
SspMI CTAG 4 cut(s) 1206, 1430, 1538, 1955
SstI GAGCTC 1 cut(s) 2229
StyD4I CCNGG 3 cut(s) 4, 1058, 2195
StyI CCWWGG 2 cut(s) 363, 979
TaaI ACNGT 4 cut(s) 425, 819, 1026, 1761
TaiI ACGT 5 cut(s) 189, 509, 807, 1506, 1991
TaqI TCGA 9 cut(s) 87, 160, 446, 924, 1293, 1382, 1391, 1555, 2229
TasI AATT 7 cut(s) 894, 917, 958, 1099, 1253, 1333, 1816
TatI WGTACW 3 cut(s) 420, 1214, 2136
TauI GCSGC 4 cut(s) 362, 478, 1943, 2046
TfiI GAWTC 3 cut(s) 989, 1202, 1715
Tru1I TTAA 6 cut(s) 840, 893, 920, 1092, 1302, 1449
Tru9I TTAA 6 cut(s) 840, 893, 920, 1092, 1302, 1449
TscAI CASTG 6 cut(s) 430, 824, 1504, 1594, 1766, 2053
TseFI GTSAC 3 cut(s) 759, 870, 1676
TseI GCWGC 1 cut(s) 2126
Tsp45I GTSAC 3 cut(s) 759, 870, 1676
TspGWI ACGGA 1 cut(s) 1178
TspRI CASTG 6 cut(s) 430, 824, 1504, 1594, 1766, 2053
Van91I CCANNNNNTGG 1 cut(s) 1763
VneI GTGCAC 1 cut(s) 110
VpaK11BI GGWCC 4 cut(s) 19, 1481, 1577, 1643
VspI ATTAAT 1 cut(s) 920
XagI CCTNNNNNAGG 2 cut(s) 947, 1476
XapI RAATTY 1 cut(s) 1253
XbaI TCTAGA 2 cut(s) 1205, 1429
XceI RCATGY 2 cut(s) 1058, 1684
XspI CTAG 4 cut(s) 1206, 1430, 1538, 1955
ZraI GACGTC 1 cut(s) 187
ZrmI AGTACT 1 cut(s) 2138
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.