Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0000398

Physical Location & Seq

Genomic Coordinates Reverse (-)

7536856 .. 7538484

Gene Structure 1629 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1016400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGGATTGGGTTAGTGCAATTGTTGGGTTGCTAGCACTTGTTTATGTGCTGCAAGCATGGACCAAAAGCAACAACAAAAAGAAGAGACTGCCTCCCGGTCCCAGAGGGTTTCCGCTTTTCGGAAATCTGCACATGTTAGGGGAGTTCCCTCACCGGGATCTGCATCGACTAGCCCAAAAGCACGGCGACATCATGTACCTGCGCTTGGGGCTTGCTCCTGTCATTATTGCCTCATCCCCTCAGGCTGCTGAGCTGTTTCTCAAAACACATGACCTTAATTTTGCAAGTAGGCCACCACTTGAAGCTGCAAAGCATATCTCTTGGGGACAAAGGAATTTGTCCTTTGGCGAGTATGGCTCTTATTGGCGAACCATGCGTAAGATGTGCACCCTTGAATTGCTTAGCGCCCACAAGATCAACTCTTTCAAGTCCACGAGGAAAGAAGAGCTTGCCCTCTTGATTAACTTTATTCAAGAGGCTGCTCGTGATCGTGTTACTGTGAATCTCAGTGCCAAGGTTTCGTCTCTCAGCGCAGACATTAGTTGCCTGATGGTGTTCGGGAAGAAGTACAAGGACAAAGAATTGGATGAGAAGGGTTTCAAGGCAGTGGTCCAAGAGGGCATGCATTTGGCTGCCACCCCTAACTTTGGTGATTACATCCCTTTTCTTGCTCCACTTGACCTCCAGGGGTTAACTAAGCGCATGAAGGTTGTTCACAAGGTGTTTGATGACTTTTTTGAGAAGATCATCGACGAGCATCTTCAGTCTACCAGCGAAGAAAGACCTAAGGACTTTGTTGATGTCATGTTGGGCTTCATGGGATCAGTAGAGTCTGAGTACCGAATTGAACGCTCCAATATCAAAGCTATAATGTTGGACATGCTCTCAGGTTCGATGGACACTACAGCAACATCGACTGAGTGGACACTCTCCGAACTCCTCAAGCATCCACAGGTAATGAAGAAAGTCCAGAAGGAGATAGAAAATGTAGTCGGCATGGAGAGAATGGTGGAAGAATCAGACTTGGAGAAGTTGGAGTACTTGGACAAGGTAGTGAAGGAAACCATGAGGCTTCATCCAGTGGCACCATTGCTGCTTCCCCATGCAGCCATTGAGGACTGCAACGTTAATGGCTTCCACATACCTGGAAAATCCCGTATTATGATCAATATATGGGCAATTGGCAGGAACCCGAGTGTGTGGACTGATGCAGACAAGTTCATACCAGAAAGGTTTGATGGCAGCAATATCGATTTCCGCGGACGTGACTTCCAATTTATTCCGTTTGGCTCCGGTCGAAGGGGTTGCCCTGGAATGCAGTTAGGCATCACGATGGTACTGCTATTGGTGGCACAACTCGTGCATTGTTTTGATTGGGAACTTCCAAATAATATGTTGCCAACTGAGTTGGACATGACGGAGGAGTTCGGTCTAACGGTTCCAAGGGCTAATCATCTCTTAGCTCTTCCTACTTATCGCCTTCGTCAACGTCAGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0008150 GO:0008152 GO:0009058 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0012505 GO:0016020 GO:0019748 GO:0031090 GO:0031984 GO:0042175 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0050896 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

500

Amino Acids

56.85

Weight (kDa)

7.72

Isoelectric Point (pI)

37.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	31 - 482	3.5e-105	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000398)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g21960 FvH4_3g24140 FvH4_3g24150 FvH4_7g09230 FvH4_7g09260
malus_domestica	MD00G1169700.v1.1 MD00G1169800.v1.1 MD01G1016400.v1.1 MD03G1188000.v1.1 MD03G1188100.v1.1 MD11G1219700.v1.1 MD11G1219900.v1.1 MD11G1220200.v1.1 MD11G1220400.v1.1 MD11G1220600.v1.1
prunus_persica	Prupe.2G006500_v2.0.a1 Prupe.4G235500_v2.0.a1 Prupe.4G235600_v2.0.a1 Prupe.4G235700_v2.0.a1 Prupe.4G235700_v2.0.a1 Prupe.4G235800_v2.0.a1 Prupe.4G235900_v2.0.a1 Prupe.6G176500_v2.0.a1
pyrus_communis	pycom01g04750 pycom03g14060 pycom11g19360 pycom11g19370 pycom11g19380 pycom11g19390 pycom11g19400 pycom11g19460
rosa_chinensis	RchiOBHm_Chr1g0345321 RchiOBHm_Chr1g0345511 RchiOBHm_Chr1g0345781 RchiOBHm_Chr2g0115981 RchiOBHm_Chr5g0043151 RchiOBHm_Chr5g0043161 RchiOBHm_Chr5g0043901 RchiOBHm_Chr6g0274841
rosa_laevigata	RLG00000013516 RLG00000018229 RLG00000028840 RLG00000028923 RLG00000034169 RLG00000034223
rosa_multiflora	Rmu_co8474237.1_g000001 Rmu_sc0000698.1_g000004 Rmu_sc0000698.1_g000021 Rmu_sc0000698.1_g000023 Rmu_sc0000698.1_g000056 Rmu_sc0000698.1_g000057 Rmu_sc0000698.1_g000122 Rmu_sc0000698.1_g000123 Rmu_sc0000698.1_g000124 Rmu_sc0001292.1_g000005 Rmu_sc0001292.1_g000006 Rmu_sc0001349.1_g000002 Rmu_sc0001692.1_g000035 Rmu_sc0002079.1_g000035 Rmu_sc0002079.1_g000045 Rmu_sc0002329.1_g000017 Rmu_sc0008148.1_g000056 Rmu_sc0008148.1_g000057 Rmu_sc0008148.1_g000058 Rmu_sc0008148.1_g000062 Rmu_sc0008611.1_g000010 Rmu_sc0009227.1_g000007
rosa_roxburghii	Rroxscaffold_1G00011260 Rroxscaffold_1G00037590 Rroxscaffold_2G00127610 Rroxscaffold_4G00309120 Rroxscaffold_7G00193880
rosa_rugosa	Rorug01G0177400 Rorug02G0202400 Rorug05G0204600 Rorug05G0209000 Rorug06G0085100 Rorug06G0085200
rosa_samantha	Rh1BG154400 Rh1DG186600 Rh2CG265200 Rh2DG267000 Rh5AG289700 Rh5AG289800 Rh5AG290000 Rh5AG293200 Rh5CG326500 Rh5DG305700 Rh5DG305800 Rh5DG310100 Rh6BG204200 Rh6CG204500 Rh6DG195700
rosa_wichuraiana	Rw1G016100 Rw1G016470 Rw2G020290 Rw5G026830 Rw5G026910 Rw5G026920 Rw5G026930 Rw6G017460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	207
AccB1I	GGYRCC	1 cut(s)	1084
AccI	GTMKAC	1 cut(s)	767
AccII	CGCG	1 cut(s)	1260
AciI	CCGC	3 cut(s)	113, 1258, 1260
AclI	AACGTT	1 cut(s)	1125
AclWI	GGATC	2 cut(s)	165, 829
AcsI	RAATTY	1 cut(s)	334
AcuI	CTGAAG	1 cut(s)	746
AdeI	CACNNNGTG	1 cut(s)	721
AfaI	GTAC	5 cut(s)	197, 569, 839, 1040, 1338
AfiI	CCNNNNNNNGG	5 cut(s)	119, 154, 205, 647, 1299
AflIII	ACRYGT	1 cut(s)	132
AgsI	TTSAA	6 cut(s)	302, 395, 427, 473, 601, 848
AjiI	CACGTC	1 cut(s)	1265
AjnI	CCWGG	3 cut(s)	684, 1144, 1309
AluBI	AGCT	5 cut(s)	253, 305, 448, 866, 1463
AluI	AGCT	5 cut(s)	253, 305, 448, 866, 1463
Alw21I	GWGCWC	1 cut(s)	389
Alw26I	GTCTC	2 cut(s)	79, 528
Alw44I	GTGCAC	1 cut(s)	385
AlwI	GGATC	2 cut(s)	165, 829
Ama87I	CYCGRG	1 cut(s)	1192
AoxI	GGCC	1 cut(s)	290
ApaLI	GTGCAC	1 cut(s)	385
ApeKI	GCWGC	8 cut(s)	49, 245, 305, 479, 632, 1093, 1106, 1242
ApoI	RAATTY	1 cut(s)	334
ArsI	GACNNNNNNTTYG	2 cut(s)	263, 295
Asp700I	GAANNNNTTC	1 cut(s)	596
AspLEI	GCGC	4 cut(s)	204, 407, 533, 702
AspS9I	GGNCC	3 cut(s)	60, 98, 610
AsuC2I	CCSGG	2 cut(s)	96, 155
AsuHPI	GGTGA	2 cut(s)	143, 662
AsuNHI	GCTAGC	1 cut(s)	31
AvaI	CYCGRG	1 cut(s)	1192
AvaII	GGWCC	3 cut(s)	60, 98, 610
AxyI	CCTNAGG	2 cut(s)	240, 786
BaeGI	GKGCMC	1 cut(s)	389
BanI	GGYRCC	1 cut(s)	1084
BarI	GAAGNNNNNNTAC	2 cut(s)	1022, 1054
BauI	CACGAG	3 cut(s)	433, 483, 1358
Bbv12I	GWGCWC	1 cut(s)	389
BbvI	GCAGC	8 cut(s)	36, 232, 292, 466, 619, 1080, 1118, 1254
BccI	CCATC	4 cut(s)	544, 889, 1232, 1327
BceAI	ACGGC	1 cut(s)	199
BcgI	CGANNNNNNTGC	6 cut(s)	1231, 1265, 1287, 1321, 1321, 1355
BciT130I	CCWGG	3 cut(s)	686, 1146, 1311
BclI	TGATCA	1 cut(s)	1164
BcnI	CCSGG	2 cut(s)	96, 155
BcoDI	GTCTC	2 cut(s)	79, 528
BfaI	CTAG	2 cut(s)	32, 170
BfmI	CTRYAG	1 cut(s)	903
BfoI	RGCGCY	1 cut(s)	408
BfuAI	ACCTGC	1 cut(s)	207
BisI	GCNGC	8 cut(s)	50, 246, 306, 480, 633, 1094, 1107, 1243
BlpI	GCTNAGC	2 cut(s)	249, 401
BlsI	GCNGC	8 cut(s)	51, 247, 307, 481, 634, 1095, 1108, 1244
BmcAI	AGTACT	1 cut(s)	1040
Bme1390I	CCNGG	5 cut(s)	96, 155, 686, 1146, 1311
Bme18I	GGWCC	3 cut(s)	60, 98, 610
BmeT110I	CYCGRG	1 cut(s)	1192
BmgBI	CACGTC	1 cut(s)	1265
BmgT120I	GGNCC	3 cut(s)	60, 98, 610
BmiI	GGNNCC	5 cut(s)	100, 1086, 1190, 1291, 1440
BmrFI	CCNGG	5 cut(s)	96, 155, 686, 1146, 1311
BmsI	GCATC	5 cut(s)	172, 766, 955, 1198, 1335
BmtI	GCTAGC	1 cut(s)	35
BplI	GAGNNNNNCTC	4 cut(s)	76, 108, 341, 373
BpmI	CTGGAG	1 cut(s)	668
Bpu1102I	GCTNAGC	2 cut(s)	249, 401
BpuEI	CTTGAG	1 cut(s)	926
BpuMI	CCSGG	2 cut(s)	96, 155
Bsa29I	ATCGAT	1 cut(s)	1251
BsaBI	GATNNNNATC	1 cut(s)	162
BsaJI	CCNNGG	5 cut(s)	513, 685, 1258, 1309, 1442
BsaWI	WCCGGW	1 cut(s)	1292
BsaXI	ACNNNNNCTCC	2 cut(s)	666, 696
Bsc4I	CCNNNNNNNGG	5 cut(s)	119, 154, 205, 647, 1299
Bse1I	ACTGG	1 cut(s)	1079
Bse21I	CCTNAGG	2 cut(s)	240, 786
Bse3DI	GCAATG	1 cut(s)	1088
Bse8I	GATNNNNATC	1 cut(s)	162
BseBI	CCWGG	3 cut(s)	686, 1146, 1311
BseCI	ATCGAT	1 cut(s)	1251
BseDI	CCNNGG	5 cut(s)	513, 685, 1258, 1309, 1442
BseGI	GGATG	5 cut(s)	233, 592, 657, 946, 1075
BseJI	GATNNNNATC	1 cut(s)	162
BseLI	CCNNNNNNNGG	5 cut(s)	119, 154, 205, 647, 1299
BseMI	GCAATG	1 cut(s)	1088
BseMII	CTCAG	8 cut(s)	240, 254, 520, 541, 825, 900, 909, 1395
BseNI	ACTGG	1 cut(s)	1079
BseRI	GAGGAG	2 cut(s)	929, 1436
BseSI	GKGCMC	1 cut(s)	389
BseXI	GCAGC	8 cut(s)	36, 232, 292, 466, 619, 1080, 1118, 1254
BsgI	GTGCAG	1 cut(s)	113
Bsh1236I	CGCG	1 cut(s)	1260
Bsh1285I	CGRYCG	1 cut(s)	1297
BshFI	GGCC	1 cut(s)	292
BshNI	GGYRCC	1 cut(s)	1084
BshVI	ATCGAT	1 cut(s)	1251
BsiEI	CGRYCG	1 cut(s)	1297
BsiHKAI	GWGCWC	1 cut(s)	389
BsiHKCI	CYCGRG	1 cut(s)	1192
BsiSI	CCGG	3 cut(s)	96, 154, 1293
BslFI	GGGAC	2 cut(s)	84, 339
BslI	CCNNNNNNNGG	5 cut(s)	119, 154, 205, 647, 1299
BsmAI	GTCTC	2 cut(s)	79, 528
BsmBI	CGTCTC	1 cut(s)	528
BsmFI	GGGAC	2 cut(s)	84, 339
BsmI	GAATGC	1 cut(s)	1320
BsnI	GGCC	1 cut(s)	292
BsoBI	CYCGRG	1 cut(s)	1192
Bsp1286I	GDGCHC	1 cut(s)	389
Bsp143I	GATC	6 cut(s)	157, 414, 487, 744, 821, 1164
Bsp1720I	GCTNAGC	2 cut(s)	249, 401
BspACI	CCGC	3 cut(s)	113, 1258, 1260
BspANI	GGCC	1 cut(s)	292
BspCNI	CTCAG	8 cut(s)	241, 253, 519, 540, 826, 899, 910, 1396
BspDI	ATCGAT	1 cut(s)	1251
BspFNI	CGCG	1 cut(s)	1260
BspLI	GGNNCC	5 cut(s)	100, 1086, 1190, 1291, 1440
BspMI	ACCTGC	1 cut(s)	207
BspOI	GCTAGC	1 cut(s)	35
BspPI	GGATC	2 cut(s)	165, 829
BspQI	GCTCTTC	2 cut(s)	438, 1470
BspT107I	GGYRCC	1 cut(s)	1084
BsrDI	GCAATG	1 cut(s)	1088
BsrI	ACTGG	1 cut(s)	1079
BssECI	CCNNGG	5 cut(s)	513, 685, 1258, 1309, 1442
BssMI	GATC	6 cut(s)	157, 414, 487, 744, 821, 1164
BssSI	CACGAG	3 cut(s)	433, 483, 1358
BssT1I	CCWWGG	2 cut(s)	513, 1442
Bst2BI	CACGAG	3 cut(s)	433, 483, 1358
Bst2UI	CCWGG	3 cut(s)	686, 1146, 1311
Bst4CI	ACNGT	2 cut(s)	499, 1438
Bst6I	CTCTTC	3 cut(s)	77, 438, 1470
BstC8I	GCNNGC	5 cut(s)	33, 54, 213, 450, 623
BstDSI	CCRYGG	1 cut(s)	1258
BstF5I	GGATG	5 cut(s)	233, 592, 657, 946, 1075
BstFNI	CGCG	1 cut(s)	1260
BstH2I	RGCGCY	1 cut(s)	408
BstHHI	GCGC	4 cut(s)	204, 407, 533, 702
BstKTI	GATC	6 cut(s)	160, 417, 490, 747, 824, 1167
BstMAI	GTCTC	2 cut(s)	79, 528
BstMBI	GATC	6 cut(s)	157, 414, 487, 744, 821, 1164
BstMCI	CGRYCG	1 cut(s)	1297
BstMWI	GCNNNNNNNGC	3 cut(s)	208, 354, 373
BstNI	CCWGG	3 cut(s)	686, 1146, 1311
BstNSI	RCATGY	3 cut(s)	136, 625, 883
BstSCI	CCNGG	5 cut(s)	94, 153, 684, 1144, 1309
BstSFI	CTRYAG	1 cut(s)	903
BstSLI	GKGCMC	1 cut(s)	389
BstUI	CGCG	1 cut(s)	1260
BstV1I	GCAGC	8 cut(s)	36, 232, 292, 466, 619, 1080, 1118, 1254
BstX2I	RGATCY	1 cut(s)	157
BstXI	CCANNNNNNTGG	1 cut(s)	1145
BstYI	RGATCY	1 cut(s)	157
Bsu15I	ATCGAT	1 cut(s)	1251
Bsu36I	CCTNAGG	2 cut(s)	240, 786
BsuRI	GGCC	1 cut(s)	292
BsuTUI	ATCGAT	1 cut(s)	1251
BtgI	CCRYGG	1 cut(s)	1258
BtrI	CACGTC	1 cut(s)	1265
BtsCI	GGATG	5 cut(s)	233, 592, 657, 946, 1075
BtsI	GCAGTG	1 cut(s)	612
BtsIMutI	CAGTG	3 cut(s)	514, 612, 1086
BveI	ACCTGC	1 cut(s)	207
Cac8I	GCNNGC	5 cut(s)	33, 54, 213, 450, 623
CfoI	GCGC	4 cut(s)	204, 407, 533, 702
Cfr13I	GGNCC	3 cut(s)	60, 98, 610
Cfr42I	CCGCGG	1 cut(s)	1261
ClaI	ATCGAT	1 cut(s)	1251
Csp6I	GTAC	5 cut(s)	196, 568, 838, 1039, 1337
CviQI	GTAC	5 cut(s)	196, 568, 838, 1039, 1337
DpnI	GATC	6 cut(s)	159, 416, 489, 746, 823, 1166
DpnII	GATC	6 cut(s)	157, 414, 487, 744, 821, 1164
DraIII	CACNNNGTG	1 cut(s)	721
Eam1104I	CTCTTC	3 cut(s)	77, 438, 1470
EarI	CTCTTC	3 cut(s)	77, 438, 1470
Eco130I	CCWWGG	2 cut(s)	513, 1442
Eco47I	GGWCC	3 cut(s)	60, 98, 610
Eco57I	CTGAAG	1 cut(s)	746
Eco81I	CCTNAGG	2 cut(s)	240, 786
Eco88I	CYCGRG	1 cut(s)	1192
EcoRII	CCWGG	3 cut(s)	684, 1144, 1309
EcoT14I	CCWWGG	2 cut(s)	513, 1442
EcoT22I	ATGCAT	1 cut(s)	627
ErhI	CCWWGG	2 cut(s)	513, 1442
Esp3I	CGTCTC	1 cut(s)	528
FalI	AAGNNNNNCTT	2 cut(s)	432, 464
FaqI	GGGAC	2 cut(s)	84, 339
FbaI	TGATCA	1 cut(s)	1164
FblI	GTMKAC	1 cut(s)	767
Fnu4HI	GCNGC	8 cut(s)	50, 246, 306, 480, 633, 1094, 1107, 1243
FokI	GGATG	5 cut(s)	220, 599, 644, 933, 1062
Fsp4HI	GCNGC	8 cut(s)	50, 246, 306, 480, 633, 1094, 1107, 1243
FspBI	CTAG	2 cut(s)	32, 170
GlaI	GCGC	4 cut(s)	203, 406, 532, 701
GluI	GCNGC	8 cut(s)	50, 246, 306, 480, 633, 1094, 1107, 1243
GsuI	CTGGAG	1 cut(s)	668
HaeII	RGCGCY	1 cut(s)	408
HaeIII	GGCC	1 cut(s)	292
HapII	CCGG	3 cut(s)	96, 154, 1293
HhaI	GCGC	4 cut(s)	204, 407, 533, 702
Hin6I	GCGC	4 cut(s)	202, 405, 531, 700
HinP1I	GCGC	4 cut(s)	202, 405, 531, 700
HincII	GTYRAC	2 cut(s)	693, 1487
HindII	GTYRAC	2 cut(s)	693, 1487
HinfI	GANTC	3 cut(s)	502, 830, 1016
HpaI	GTTAAC	1 cut(s)	693
HpaII	CCGG	3 cut(s)	96, 154, 1293
HphI	GGTGA	2 cut(s)	143, 662
Hpy166II	GTNNAC	8 cut(s)	387, 432, 693, 715, 768, 924, 1203, 1487
Hpy188I	TCNGA	4 cut(s)	122, 835, 934, 1021
Hpy188III	TCNNGA	6 cut(s)	457, 473, 485, 559, 970, 1330
Hpy8I	GTNNAC	8 cut(s)	387, 432, 693, 715, 768, 924, 1203, 1487
Hpy99I	CGWCG	1 cut(s)	755
HpyAV	CCTTC	6 cut(s)	586, 700, 967, 1051, 1293, 1490
HpyCH4III	ACNGT	2 cut(s)	499, 1438
HpyCH4IV	ACGT	3 cut(s)	1125, 1264, 1489
HpyF10VI	GCNNNNNNNGC	3 cut(s)	208, 354, 373
HpySE526I	ACGT	3 cut(s)	1125, 1264, 1489
HspAI	GCGC	4 cut(s)	202, 405, 531, 700
Ksp22I	TGATCA	1 cut(s)	1164
KspAI	GTTAAC	1 cut(s)	693
KspI	CCGCGG	1 cut(s)	1261
Kzo9I	GATC	6 cut(s)	157, 414, 487, 744, 821, 1164
LguI	GCTCTTC	2 cut(s)	438, 1470
LmnI	GCTCC	4 cut(s)	220, 676, 857, 1295
Lsp1109I	GCAGC	8 cut(s)	36, 232, 292, 466, 619, 1080, 1118, 1254
LweI	GCATC	5 cut(s)	172, 766, 955, 1198, 1335
MaeI	CTAG	2 cut(s)	32, 170
MaeII	ACGT	3 cut(s)	1125, 1264, 1489
MaeIII	GTNAC	2 cut(s)	493, 1265
MalI	GATC	6 cut(s)	159, 416, 489, 746, 823, 1166
MboI	GATC	6 cut(s)	157, 414, 487, 744, 821, 1164
MboII	GAAGA	9 cut(s)	94, 455, 574, 752, 754, 788, 973, 1025, 1457
MfeI	CAATTG	2 cut(s)	18, 1179
MflI	RGATCY	1 cut(s)	157
MhlI	GDGCHC	1 cut(s)	389
MluCI	AATT	8 cut(s)	18, 277, 334, 395, 581, 843, 1179, 1274
MlyI	GAGTC	1 cut(s)	839
MmeI	TCCRAC	3 cut(s)	855, 1014, 1389
Mph1103I	ATGCAT	1 cut(s)	627
MroXI	GAANNNNTTC	1 cut(s)	596
MseI	TTAA	4 cut(s)	276, 462, 692, 1128
MslI	CAYNNNNRTG	1 cut(s)	1331
MspA1I	CMGCKG	1 cut(s)	1260
MspI	CCGG	3 cut(s)	96, 154, 1293
MspR9I	CCNGG	5 cut(s)	96, 155, 686, 1146, 1311
MunI	CAATTG	2 cut(s)	18, 1179
Mva1269I	GAATGC	1 cut(s)	1320
MvaI	CCWGG	3 cut(s)	686, 1146, 1311
MvnI	CGCG	1 cut(s)	1260
MwoI	GCNNNNNNNGC	3 cut(s)	208, 354, 373
NciI	CCSGG	2 cut(s)	96, 155
NdeII	GATC	6 cut(s)	157, 414, 487, 744, 821, 1164
NheI	GCTAGC	1 cut(s)	31
NlaIV	GGNNCC	5 cut(s)	100, 1086, 1190, 1291, 1440
NmuCI	GTSAC	1 cut(s)	1265
NsiI	ATGCAT	1 cut(s)	627
NspI	RCATGY	3 cut(s)	136, 625, 883
PaeI	GCATGC	1 cut(s)	625
PciI	ACATGT	1 cut(s)	132
PciSI	GCTCTTC	2 cut(s)	438, 1470
PctI	GAATGC	1 cut(s)	1320
PdmI	GAANNNNTTC	1 cut(s)	596
PfeI	GAWTC	2 cut(s)	502, 1016
PkrI	GCNGC	8 cut(s)	51, 247, 307, 481, 634, 1095, 1108, 1244
PleI	GAGTC	1 cut(s)	838
PpsI	GAGTC	1 cut(s)	838
PscI	ACATGT	1 cut(s)	132
Psp1406I	AACGTT	1 cut(s)	1125
Psp6I	CCWGG	3 cut(s)	684, 1144, 1309
PspGI	CCWGG	3 cut(s)	684, 1144, 1309
PspN4I	GGNNCC	5 cut(s)	100, 1086, 1190, 1291, 1440
PspPI	GGNCC	3 cut(s)	60, 98, 610
PsuI	RGATCY	1 cut(s)	157
RsaI	GTAC	5 cut(s)	197, 569, 839, 1040, 1338
RsaNI	GTAC	5 cut(s)	196, 568, 838, 1039, 1337
RseI	CAYNNNNRTG	1 cut(s)	1331
SacII	CCGCGG	1 cut(s)	1261
SapI	GCTCTTC	2 cut(s)	438, 1470
SaqAI	TTAA	4 cut(s)	276, 462, 692, 1128
SatI	GCNGC	8 cut(s)	50, 246, 306, 480, 633, 1094, 1107, 1243
Sau3AI	GATC	6 cut(s)	157, 414, 487, 744, 821, 1164
Sau96I	GGNCC	3 cut(s)	60, 98, 610
ScaI	AGTACT	1 cut(s)	1040
SchI	GAGTC	1 cut(s)	839
ScrFI	CCNGG	5 cut(s)	96, 155, 686, 1146, 1311
SduI	GDGCHC	1 cut(s)	389
SfaNI	GCATC	5 cut(s)	172, 766, 955, 1198, 1335
SfcI	CTRYAG	1 cut(s)	903
Sfr303I	CCGCGG	1 cut(s)	1261
SgrBI	CCGCGG	1 cut(s)	1261
SinI	GGWCC	3 cut(s)	60, 98, 610
SmiMI	CAYNNNNRTG	1 cut(s)	1331
SmlI	CTYRAG	1 cut(s)	941
SmoI	CTYRAG	1 cut(s)	941
SphI	GCATGC	1 cut(s)	625
Sse9I	AATT	8 cut(s)	18, 277, 334, 395, 581, 843, 1179, 1274
SsiI	CCGC	3 cut(s)	113, 1258, 1260
SspMI	CTAG	2 cut(s)	32, 170
StyD4I	CCNGG	5 cut(s)	94, 153, 684, 1144, 1309
StyI	CCWWGG	2 cut(s)	513, 1442
TaaI	ACNGT	2 cut(s)	499, 1438
TaiI	ACGT	3 cut(s)	1128, 1267, 1492
TaqI	TCGA	6 cut(s)	166, 750, 893, 914, 1251, 1297
TaqII	GACCGA	1 cut(s)	1418
TasI	AATT	8 cut(s)	18, 277, 334, 395, 581, 843, 1179, 1274
TatI	WGTACW	2 cut(s)	567, 1038
TfiI	GAWTC	2 cut(s)	502, 1016
Tru1I	TTAA	4 cut(s)	276, 462, 692, 1128
Tru9I	TTAA	4 cut(s)	276, 462, 692, 1128
TscAI	CASTG	3 cut(s)	514, 612, 1086
TseFI	GTSAC	1 cut(s)	1265
TseI	GCWGC	8 cut(s)	49, 245, 305, 479, 632, 1093, 1106, 1242
Tsp45I	GTSAC	1 cut(s)	1265
TspDTI	ATGAA	5 cut(s)	719, 805, 974, 1064, 1210
TspGWI	ACGGA	2 cut(s)	1272, 1433
TspRI	CASTG	3 cut(s)	514, 612, 1086
VneI	GTGCAC	1 cut(s)	385
VpaK11BI	GGWCC	3 cut(s)	60, 98, 610
XapI	RAATTY	1 cut(s)	334
XceI	RCATGY	3 cut(s)	136, 625, 883
XmiI	GTMKAC	1 cut(s)	767
XmnI	GAANNNNTTC	1 cut(s)	596
XspI	CTAG	2 cut(s)	32, 170
ZrmI	AGTACT	1 cut(s)	1040
Zsp2I	ATGCAT	1 cut(s)	627

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.