Rmu_sc0008148.1_g000056

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008148.1
Physical Location & Seq
Reverse (-)
237695 .. 238327
633 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008148.1_g000056.1.cds

Sequence Viewer

Length: 633 bp
atgactaattatcggcatgacatgcttgtggcttcaatggacacatcagcaacaacaattgagtggggcctctctgaactcataaaacatccacaactaatcaagaaggtccaaaaagagctagaacatgtggtgggcatggagagaatggttaaggaatcaaacttggacaagttggagtacttggacatgatagtgaaagaaaccttgaggctacatccagtggcaccattgttgcttccctatgcatctactgaagattgcattgttaatggcttccacatacccaaaaaatcgcgcgttattgtaaatgtatgggcaatcgggagagacaagcatgcttggaccaatgcagacgagttcatacccgaaagatttgcagggagtaatatagacctgaggggaaaccactttcagcttattccatttgggtcgggtcgcagacgttgccctggaattgaattagggctagttgtggttaagctagtattggcacaacttctgcattgtttcgattgggaacttccagatggtttgttgcccgctgagttggacatgacggaggagtttggtataactgttccacgagccaagcatctgctggctgttccttcttatcacctacacaaataa

Protein Analysis

210

Amino Acids

23.93

Weight (kDa)

6.41

Isoelectric Point (pI)

33.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000398)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21960 FvH4_3g24140 FvH4_3g24150 FvH4_7g09230 FvH4_7g09260
malus_domestica MD00G1169700.v1.1 MD00G1169800.v1.1 MD01G1016400.v1.1 MD03G1188000.v1.1 MD03G1188100.v1.1 MD11G1219700.v1.1 MD11G1219900.v1.1 MD11G1220200.v1.1 MD11G1220400.v1.1 MD11G1220600.v1.1
prunus_persica Prupe.2G006500_v2.0.a1 Prupe.4G235500_v2.0.a1 Prupe.4G235600_v2.0.a1 Prupe.4G235700_v2.0.a1 Prupe.4G235700_v2.0.a1 Prupe.4G235800_v2.0.a1 Prupe.4G235900_v2.0.a1 Prupe.6G176500_v2.0.a1
pyrus_communis pycom01g04750 pycom03g14060 pycom11g19360 pycom11g19370 pycom11g19380 pycom11g19390 pycom11g19400 pycom11g19460
rosa_chinensis RchiOBHm_Chr1g0345321 RchiOBHm_Chr1g0345511 RchiOBHm_Chr1g0345781 RchiOBHm_Chr2g0115981 RchiOBHm_Chr5g0043151 RchiOBHm_Chr5g0043161 RchiOBHm_Chr5g0043901 RchiOBHm_Chr6g0274841
rosa_laevigata RLG00000013516 RLG00000018229 RLG00000028840 RLG00000028923 RLG00000034169 RLG00000034223
rosa_multiflora Rmu_co8474237.1_g000001 Rmu_sc0000698.1_g000004 Rmu_sc0000698.1_g000021 Rmu_sc0000698.1_g000023 Rmu_sc0000698.1_g000056 Rmu_sc0000698.1_g000057 Rmu_sc0000698.1_g000122 Rmu_sc0000698.1_g000123 Rmu_sc0000698.1_g000124 Rmu_sc0001292.1_g000005 Rmu_sc0001292.1_g000006 Rmu_sc0001349.1_g000002 Rmu_sc0001692.1_g000035 Rmu_sc0002079.1_g000035 Rmu_sc0002079.1_g000045 Rmu_sc0002329.1_g000017 Rmu_sc0008148.1_g000056 Rmu_sc0008148.1_g000057 Rmu_sc0008148.1_g000058 Rmu_sc0008148.1_g000062 Rmu_sc0008611.1_g000010 Rmu_sc0009227.1_g000007
rosa_roxburghii Rroxscaffold_1G00011260 Rroxscaffold_1G00037590 Rroxscaffold_2G00127610 Rroxscaffold_4G00309120 Rroxscaffold_7G00193880
rosa_rugosa Rorug01G0177400 Rorug02G0202400 Rorug05G0204600 Rorug05G0209000 Rorug06G0085100 Rorug06G0085200
rosa_samantha Rh1BG154400 Rh1DG186600 Rh2CG265200 Rh2DG267000 Rh5AG289700 Rh5AG289800 Rh5AG290000 Rh5AG293200 Rh5CG326500 Rh5DG305700 Rh5DG305800 Rh5DG310100 Rh6BG204200 Rh6CG204500 Rh6DG195700
rosa_wichuraiana Rw1G016100 Rw1G016470 Rw2G020290 Rw5G026830 Rw5G026910 Rw5G026920 Rw5G026930 Rw6G017460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 226
AccII CGCG 2 cut(s) 298, 300
AciI CCGC 1 cut(s) 543
AcuI CTGAAG 1 cut(s) 276
AfaI GTAC 1 cut(s) 182
AflIII ACRYGT 1 cut(s) 127
AgsI TTSAA 2 cut(s) 36, 461
AjnI CCWGG 1 cut(s) 451
AluBI AGCT 3 cut(s) 121, 418, 484
AluI AGCT 3 cut(s) 121, 418, 484
Alw26I GTCTC 1 cut(s) 324
AoxI GGCC 1 cut(s) 67
AspLEI GCGC 1 cut(s) 300
AspS9I GGNCC 3 cut(s) 67, 109, 345
AsuHPI GGTGA 1 cut(s) 611
AvaII GGWCC 2 cut(s) 109, 345
AxyI CCTNAGG 1 cut(s) 398
BanI GGYRCC 1 cut(s) 226
BauI CACGAG 1 cut(s) 585
BccI CCATC 1 cut(s) 524
BcgI CGANNNNNNTGC 2 cut(s) 359, 393
BciT130I CCWGG 1 cut(s) 453
BcoDI GTCTC 1 cut(s) 324
BfaI CTAG 3 cut(s) 122, 470, 485
BmcAI AGTACT 1 cut(s) 182
Bme1390I CCNGG 1 cut(s) 453
Bme18I GGWCC 2 cut(s) 109, 345
BmgT120I GGNCC 3 cut(s) 67, 109, 345
BmiI GGNNCC 2 cut(s) 68, 228
BmrFI CCNGG 1 cut(s) 453
BmsI GCATC 2 cut(s) 257, 604
BpuEI CTTGAG 1 cut(s) 229
BsaJI CCNNGG 1 cut(s) 451
Bse1I ACTGG 1 cut(s) 221
Bse21I CCTNAGG 1 cut(s) 398
BseBI CCWGG 1 cut(s) 453
BseDI CCNNGG 1 cut(s) 451
BseGI GGATG 2 cut(s) 88, 217
BseMII CTCAG 2 cut(s) 389, 537
BseNI ACTGG 1 cut(s) 221
BseRI GAGGAG 1 cut(s) 578
Bsh1236I CGCG 2 cut(s) 298, 300
BshFI GGCC 1 cut(s) 69
BshNI GGYRCC 1 cut(s) 226
BsmAI GTCTC 1 cut(s) 324
BsnI GGCC 1 cut(s) 69
BspACI CCGC 1 cut(s) 543
BspANI GGCC 1 cut(s) 69
BspCNI CTCAG 2 cut(s) 390, 538
BspFNI CGCG 2 cut(s) 298, 300
BspLI GGNNCC 2 cut(s) 68, 228
BspT107I GGYRCC 1 cut(s) 226
BsrI ACTGG 1 cut(s) 221
BssECI CCNNGG 1 cut(s) 451
BssSI CACGAG 1 cut(s) 585
Bst2BI CACGAG 1 cut(s) 585
Bst2UI CCWGG 1 cut(s) 453
Bst4CI ACNGT 1 cut(s) 580
BstAPI GCANNNNNTGC 2 cut(s) 22, 447
BstC8I GCNNGC 3 cut(s) 339, 543, 603
BstDEI CTNAG 2 cut(s) 398, 546
BstF5I GGATG 2 cut(s) 88, 217
BstFNI CGCG 2 cut(s) 298, 300
BstHHI GCGC 1 cut(s) 300
BstMAI GTCTC 1 cut(s) 324
BstMWI GCNNNNNNNGC 2 cut(s) 22, 447
BstNI CCWGG 1 cut(s) 453
BstNSI RCATGY 3 cut(s) 25, 131, 341
BstSCI CCNGG 1 cut(s) 451
BstUI CGCG 2 cut(s) 298, 300
Bsu36I CCTNAGG 1 cut(s) 398
BsuRI GGCC 1 cut(s) 69
BtsCI GGATG 2 cut(s) 88, 217
BtsIMutI CAGTG 1 cut(s) 228
Cac8I GCNNGC 3 cut(s) 339, 543, 603
CfoI GCGC 1 cut(s) 300
Cfr13I GGNCC 3 cut(s) 67, 109, 345
Csp6I GTAC 1 cut(s) 181
CviAII CATG 7 cut(s) 17, 22, 128, 139, 190, 338, 556
CviQI GTAC 1 cut(s) 181
DdeI CTNAG 2 cut(s) 398, 546
Eco47I GGWCC 2 cut(s) 109, 345
Eco57I CTGAAG 1 cut(s) 276
Eco81I CCTNAGG 1 cut(s) 398
EcoO109I RGGNCCY 1 cut(s) 67
EcoRII CCWGG 1 cut(s) 451
EcoT22I ATGCAT 1 cut(s) 250
FaeI CATG 7 cut(s) 20, 25, 131, 142, 193, 341, 559
FatI CATG 7 cut(s) 16, 21, 127, 138, 189, 337, 555
FauI CCCGC 1 cut(s) 550
FokI GGATG 2 cut(s) 75, 204
FspBI CTAG 3 cut(s) 122, 470, 485
GlaI GCGC 1 cut(s) 299
HaeIII GGCC 1 cut(s) 69
HhaI GCGC 1 cut(s) 300
Hin1II CATG 7 cut(s) 20, 25, 131, 142, 193, 341, 559
Hin6I GCGC 1 cut(s) 298
HinP1I GCGC 1 cut(s) 298
HinfI GANTC 1 cut(s) 158
HphI GGTGA 1 cut(s) 611
Hpy188I TCNGA 1 cut(s) 76
Hpy188III TCNNGA 3 cut(s) 103, 325, 527
HpyAV CCTTC 2 cut(s) 100, 621
HpyCH4III ACNGT 1 cut(s) 580
HpyCH4IV ACGT 1 cut(s) 445
HpyCH4V TGCA 5 cut(s) 248, 264, 353, 380, 505
HpyF10VI GCNNNNNNNGC 2 cut(s) 22, 447
HpyF3I CTNAG 2 cut(s) 398, 546
HpySE526I ACGT 1 cut(s) 445
Hsp92II CATG 7 cut(s) 20, 25, 131, 142, 193, 341, 559
HspAI GCGC 1 cut(s) 298
LpnPI CCDG 7 cut(s) 234, 366, 410, 438, 465, 540, 587
LweI GCATC 2 cut(s) 257, 604
MaeI CTAG 3 cut(s) 122, 470, 485
MaeII ACGT 1 cut(s) 445
MboII GAAGA 1 cut(s) 269
MfeI CAATTG 1 cut(s) 57
MluCI AATT 4 cut(s) 7, 57, 456, 461
MmeI TCCRAC 2 cut(s) 156, 531
MnlI CCTC 4 cut(s) 80, 204, 393, 556
Mph1103I ATGCAT 1 cut(s) 250
MseI TTAA 3 cut(s) 153, 270, 480
MslI CAYNNNNRTG 2 cut(s) 26, 194
MspA1I CMGCKG 1 cut(s) 545
MspR9I CCNGG 1 cut(s) 453
MunI CAATTG 1 cut(s) 57
MvaI CCWGG 1 cut(s) 453
MvnI CGCG 2 cut(s) 298, 300
MwoI GCNNNNNNNGC 2 cut(s) 22, 447
NlaIII CATG 7 cut(s) 20, 25, 131, 142, 193, 341, 559
NlaIV GGNNCC 2 cut(s) 68, 228
NsiI ATGCAT 1 cut(s) 250
NspI RCATGY 3 cut(s) 25, 131, 341
PaeI GCATGC 1 cut(s) 341
PciI ACATGT 1 cut(s) 127
PfeI GAWTC 1 cut(s) 158
PscI ACATGT 1 cut(s) 127
Psp6I CCWGG 1 cut(s) 451
PspGI CCWGG 1 cut(s) 451
PspN4I GGNNCC 2 cut(s) 68, 228
PspPI GGNCC 3 cut(s) 67, 109, 345
RsaI GTAC 1 cut(s) 182
RsaNI GTAC 1 cut(s) 181
RseI CAYNNNNRTG 2 cut(s) 26, 194
SaqAI TTAA 3 cut(s) 153, 270, 480
Sau96I GGNCC 3 cut(s) 67, 109, 345
ScaI AGTACT 1 cut(s) 182
ScrFI CCNGG 1 cut(s) 453
SetI ASST 8 cut(s) 111, 123, 209, 399, 420, 448, 486, 624
SfaNI GCATC 2 cut(s) 257, 604
SinI GGWCC 2 cut(s) 109, 345
SmiMI CAYNNNNRTG 2 cut(s) 26, 194
SmlI CTYRAG 1 cut(s) 208
SmoI CTYRAG 1 cut(s) 208
SphI GCATGC 1 cut(s) 341
Sse9I AATT 4 cut(s) 7, 57, 456, 461
SsiI CCGC 1 cut(s) 543
SspMI CTAG 3 cut(s) 122, 470, 485
StyD4I CCNGG 1 cut(s) 451
TaaI ACNGT 1 cut(s) 580
TaiI ACGT 1 cut(s) 448
TaqI TCGA 1 cut(s) 513
TasI AATT 4 cut(s) 7, 57, 456, 461
TatI WGTACW 1 cut(s) 180
TfiI GAWTC 1 cut(s) 158
Tru1I TTAA 3 cut(s) 153, 270, 480
Tru9I TTAA 3 cut(s) 153, 270, 480
TscAI CASTG 1 cut(s) 228
TspDTI ATGAA 1 cut(s) 352
TspGWI ACGGA 1 cut(s) 575
TspRI CASTG 1 cut(s) 228
VpaK11BI GGWCC 2 cut(s) 109, 345
XceI RCATGY 3 cut(s) 25, 131, 341
XcmI CCANNNNNNNNNTGG 1 cut(s) 598
XspI CTAG 3 cut(s) 122, 470, 485
ZrmI AGTACT 1 cut(s) 182
Zsp2I ATGCAT 1 cut(s) 250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.