Rorug05G0209000

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
20866073 .. 20869431
3359 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0209000.1

Sequence Viewer

Length: 2016 bp
ATGGCTTCATATACGCCCAAAAACATCCTCATAACTGGGGCAGCTGGCTTCATTGCTTCCCATGTGGCCAACCGGCTCGTTCGCAGTCACCCTGAATACAATATCGTTGTGCTTGACAAGCTTGACTATTGTTCGAATCTGAAAAACCTCCTTCCCTCTAAGTCGTCGCCCAATTTCAAGTTTGTTAAGGGGGACATAGGAAGTGCTGACCTTGTCAACTATCTCCTCATCACTGAGTCGATAGATACAATAATGCATTTTGCAGCCCAGACCCATGTCGACAACTCCTTTGGCAACAGCTTCGAGTTCACAAAGAACAACATCTATGGCACCCATGTTCTTCTAGAAGCATGTAAAGTCACTGGCCAAATCAGGAGGTTCATCCATGTTAGCACAGATGAGGTTTATGGTGAGACTGATGAAGATGCTGTTGTAGGAAACCATGAGGCATCTCAACTCCTCCCAACAAATCCATACTCTGCAACGAAAGCTGGAGCAGAAATGCTTGTTATGGCATATGGCAGGTCTTATGGGTTGCCTGTTATAACGACCCGCGGAAACAATGTTTATGGACCAAATCAATTTCCTGAAAAATTGATTCCAAAGTTCATTCTCTTGGCTATGCAAGGGAAACCTCTTCCCATTCATGGGGATGGTGCTAATGTGAGGAGCTACTTATACTGTGAGGATGTTGCCGAGGCTTTTGAACTCATTCTTCACAAAGGAGAGGTTGGCCATGTGTACAATATTGGGACAAAGAAGGAAAGGAGAGTTATTGATGTGGCCAGAGATATATGCAGACTTTTCAATGTGGACTCGGAAGCATGCATCAAGTTTGTTGAAAACAGACCTTTCAATGACCAGAGGTACTTCCTTGATGATCAGAAGTTGACGGTGTTGGGGTGGTCAGAGCGGACTACCTGGGAAGAGGGGCTGAAGAAGACTATAGAATGGTACACTAAGAATCCTAACTGGTGGGGTGATGTATCTGGGGCACTGCTTCCTCATCCACGAATGTTGATGATGCCTGGTGGAATTGAGAGACATTTTGATGAGCCTGAAGAGGAAAAATCCGAGTCTTATGTCTCAAGTAATCCTCGAATGTTGGTTCCCCCTTCCAAATGCTGTGGCTCTCCTCGTAAACCTCCTTATAAGTTCTTGATCTATGGTAAGACTGGGTGGATTGGTGGTGTACTTGGGAAGCTCTGTGAAAAACAAGGGATTCCTTATGAATATGGAAAAGGGCGTCTTGAGGATCGGTCTTCACTTGCTGCAGATATTCAGAATATTAAGCCAACTCATGTGTTTAATGCTGCTGGTGTGACTGGTAGACCTAATGTTGATTGGTGTGAATCTCATAAAGCAGAAACAATTCGAGCCAATGTTGCTGGAACCCTAACCCTAGCAGATGTTTGCAGAGAGCATGGGCTCCTTATGGTCAATTTTGCGACTGGGTGTATATTTGAGTATGATGCTAAACATCCAGAGGGTTCAGGGATTGGGTTCACTGAAGAAGACAAACCCAATTTCTTTGGTTCTTTCTATTCAAAAACCAAGGCCATGGTTGAGGAGCTATTGAATGAATTCGACAATGTTTGCACTCTTAGAGTTCGAATGCCCATCTCATCAGACCTGAACAACCCACGTAACTTCATCACCAAGATTTCTCGCTATAACAAAGTGGTCAACATTCCTAACAGCATGACCATCTTGGATGAACTACTACCTATTTCAATCGAGATGGCAAAGCGGAACTTGAGGGGTATCTGGAACTTCACAAATCCTGGGGTCGTGAGCCATAATGAGATTCTGGAAATGTACAAGCAATACATTGACCCAAGTTTCAAATGGGCAAACTTCACAATTGAAGAGCAAGCCAAGGTTATAGTTGCCGCCCGAAGCAACAATGAAATGGATGCATCCAAGTTGAAGAAAGAGTTCCCCGAGTTGCTACCAATCAAGGAATCGCTGATAAAGTATGTCTTTGAACCAAACAAGAAAAGTTCTGCAAATTAA

Protein Analysis

671

Amino Acids

75.58

Weight (kDa)

6.52

Isoelectric Point (pI)

36.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RmlD_sub_bind PF04321 8 - 318 7.5e-15 RmlD substrate binding domain
Epimerase PF01370 9 - 251 4.8e-55 NAD dependent epimerase/dehydratase family
Polysacc_synt_2 PF02719 9 - 280 3.7e-20 Polysaccharide biosynthesis protein
GDP_Man_Dehyd PF16363 10 - 315 2.7e-65 GDP-mannose 4,6 dehydratase
3Beta_HSD PF01073 10 - 235 2e-23 3-beta hydroxysteroid dehydrogenase/isomerase family
NAD_binding_4 PF07993 11 - 191 2.1e-18 Male sterility protein
RmlD_sub_bind PF04321 385 - 555 1.7e-14 RmlD substrate binding domain
Epimerase PF01370 388 - 537 2.2e-11 NAD dependent epimerase/dehydratase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000398)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21960 FvH4_3g24140 FvH4_3g24150 FvH4_7g09230 FvH4_7g09260
malus_domestica MD00G1169700.v1.1 MD00G1169800.v1.1 MD01G1016400.v1.1 MD03G1188000.v1.1 MD03G1188100.v1.1 MD11G1219700.v1.1 MD11G1219900.v1.1 MD11G1220200.v1.1 MD11G1220400.v1.1 MD11G1220600.v1.1
prunus_persica Prupe.2G006500_v2.0.a1 Prupe.4G235500_v2.0.a1 Prupe.4G235600_v2.0.a1 Prupe.4G235700_v2.0.a1 Prupe.4G235700_v2.0.a1 Prupe.4G235800_v2.0.a1 Prupe.4G235900_v2.0.a1 Prupe.6G176500_v2.0.a1
pyrus_communis pycom01g04750 pycom03g14060 pycom11g19360 pycom11g19370 pycom11g19380 pycom11g19390 pycom11g19400 pycom11g19460
rosa_chinensis RchiOBHm_Chr1g0345321 RchiOBHm_Chr1g0345511 RchiOBHm_Chr1g0345781 RchiOBHm_Chr2g0115981 RchiOBHm_Chr5g0043151 RchiOBHm_Chr5g0043161 RchiOBHm_Chr5g0043901 RchiOBHm_Chr6g0274841
rosa_laevigata RLG00000013516 RLG00000018229 RLG00000028840 RLG00000028923 RLG00000034169 RLG00000034223
rosa_multiflora Rmu_co8474237.1_g000001 Rmu_sc0000698.1_g000004 Rmu_sc0000698.1_g000021 Rmu_sc0000698.1_g000023 Rmu_sc0000698.1_g000056 Rmu_sc0000698.1_g000057 Rmu_sc0000698.1_g000122 Rmu_sc0000698.1_g000123 Rmu_sc0000698.1_g000124 Rmu_sc0001292.1_g000005 Rmu_sc0001292.1_g000006 Rmu_sc0001349.1_g000002 Rmu_sc0001692.1_g000035 Rmu_sc0002079.1_g000035 Rmu_sc0002079.1_g000045 Rmu_sc0002329.1_g000017 Rmu_sc0008148.1_g000056 Rmu_sc0008148.1_g000057 Rmu_sc0008148.1_g000058 Rmu_sc0008148.1_g000062 Rmu_sc0008611.1_g000010 Rmu_sc0009227.1_g000007
rosa_roxburghii Rroxscaffold_1G00011260 Rroxscaffold_1G00037590 Rroxscaffold_2G00127610 Rroxscaffold_4G00309120 Rroxscaffold_7G00193880
rosa_rugosa Rorug01G0177400 Rorug02G0202400 Rorug05G0204600 Rorug05G0209000 Rorug06G0085100 Rorug06G0085200
rosa_samantha Rh1BG154400 Rh1DG186600 Rh2CG265200 Rh2DG267000 Rh5AG289700 Rh5AG289800 Rh5AG290000 Rh5AG293200 Rh5CG326500 Rh5DG305700 Rh5DG305800 Rh5DG310100 Rh6BG204200 Rh6CG204500 Rh6DG195700
rosa_wichuraiana Rw1G016100 Rw1G016470 Rw2G020290 Rw5G026830 Rw5G026910 Rw5G026920 Rw5G026930 Rw6G017460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 545, 1152
Acc36I ACCTGC 1 cut(s) 513
AccB1I GGYRCC 1 cut(s) 329
AccBSI CCGCTC 1 cut(s) 913
AccI GTMKAC 2 cut(s) 279, 1330
AccII CGCG 1 cut(s) 555
AciI CCGC 5 cut(s) 553, 555, 913, 1750, 1893
AclWI GGATC 1 cut(s) 1263
AcoI YGGCCR 4 cut(s) 66, 364, 733, 783
AcsI RAATTY 1 cut(s) 1583
AcuI CTGAAG 3 cut(s) 956, 1080, 1530
AcyI GRCGYC 1 cut(s) 1246
AfaI GTAC 5 cut(s) 743, 869, 956, 1194, 1820
AfiI CCNNNNNNNGG 2 cut(s) 647, 648
AjnI CCWGG 3 cut(s) 920, 1027, 1783
AluBI AGCT 7 cut(s) 44, 121, 300, 491, 672, 1204, 1573
AluI AGCT 7 cut(s) 44, 121, 300, 491, 672, 1204, 1573
Alw26I GTCTC 3 cut(s) 407, 1036, 1090
AlwI GGATC 1 cut(s) 1263
Ama87I CYCGRG 1 cut(s) 1943
AoxI GGCC 5 cut(s) 66, 364, 733, 783, 1557
ApeKI GCWGC 4 cut(s) 41, 263, 1271, 1313
ApoI RAATTY 1 cut(s) 1583
ArsI GACNNNNNNTTYG 2 cut(s) 272, 304
Asp700I GAANNNNTTC 4 cut(s) 711, 1371, 1583, 1937
AspS9I GGNCC 1 cut(s) 572
AsuHPI GGTGA 4 cut(s) 80, 422, 992, 1648
AsuII TTCGAA 2 cut(s) 134, 1612
AvaI CYCGRG 1 cut(s) 1943
AvaII GGWCC 1 cut(s) 572
BaeGI GKGCMC 1 cut(s) 997
BalI TGGCCA 4 cut(s) 68, 366, 735, 785
BanI GGYRCC 1 cut(s) 329
BanII GRGCYC 1 cut(s) 1431
BbsI GAAGAC 3 cut(s) 947, 1254, 1521
BbvI GCAGC 4 cut(s) 53, 275, 1258, 1300
BccI CCATC 4 cut(s) 647, 1628, 1715, 1735
BcgI CGANNNNNNTGC 2 cut(s) 283, 317
BciT130I CCWGG 3 cut(s) 922, 1029, 1785
BclI TGATCA 1 cut(s) 880
BcoDI GTCTC 3 cut(s) 407, 1036, 1090
BfaI CTAG 2 cut(s) 344, 1403
BfmI CTRYAG 2 cut(s) 945, 1272
BfuAI ACCTGC 1 cut(s) 513
BisI GCNGC 5 cut(s) 42, 264, 1272, 1314, 1893
BlsI GCNGC 5 cut(s) 43, 265, 1273, 1315, 1894
Bme1390I CCNGG 3 cut(s) 922, 1029, 1785
Bme18I GGWCC 1 cut(s) 572
BmeT110I CYCGRG 1 cut(s) 1943
BmgT120I GGNCC 1 cut(s) 572
BmiI GGNNCC 4 cut(s) 331, 1110, 1393, 1430
BmrFI CCNGG 3 cut(s) 922, 1029, 1785
BmrI ACTGGG 3 cut(s) 45, 1185, 1461
BmsI GCATC 7 cut(s) 415, 458, 837, 1014, 1462, 1906, 1928
BmuI ACTGGG 3 cut(s) 45, 1185, 1461
BoxI GACNNNNGTC 1 cut(s) 275
BpiI GAAGAC 3 cut(s) 947, 1254, 1521
BpmI CTGGAG 1 cut(s) 513
Bpu14I TTCGAA 2 cut(s) 134, 1612
BpuEI CTTGAG 3 cut(s) 1072, 1271, 1777
BsaAI YACGTR 1 cut(s) 1646
BsaHI GRCGYC 1 cut(s) 1246
BsaJI CCNNGG 7 cut(s) 553, 696, 921, 1554, 1560, 1784, 1878
Bsc4I CCNNNNNNNGG 2 cut(s) 647, 648
Bse118I RCCGGY 1 cut(s) 72
Bse1I ACTGG 6 cut(s) 40, 367, 977, 1180, 1330, 1456
Bse3DI GCAATG 1 cut(s) 51
BseBI CCWGG 3 cut(s) 922, 1029, 1785
BseDI CCNNGG 7 cut(s) 553, 696, 921, 1554, 1560, 1784, 1878
BseGI GGATG 9 cut(s) 24, 381, 658, 694, 1006, 1480, 1720, 1919, 1921
BseLI CCNNNNNNNGG 2 cut(s) 647, 648
BseMI GCAATG 1 cut(s) 51
BseMII CTCAG 1 cut(s) 225
BseNI ACTGG 6 cut(s) 40, 367, 977, 1180, 1330, 1456
BseRI GAGGAG 5 cut(s) 215, 449, 682, 1125, 1583
BseSI GKGCMC 1 cut(s) 997
BseXI GCAGC 4 cut(s) 53, 275, 1258, 1300
Bsh1236I CGCG 1 cut(s) 555
BshFI GGCC 5 cut(s) 68, 366, 735, 785, 1559
BshNI GGYRCC 1 cut(s) 329
BsiHKCI CYCGRG 1 cut(s) 1943
BsiSI CCGG 1 cut(s) 73
BslFI GGGAC 2 cut(s) 206, 766
BslI CCNNNNNNNGG 2 cut(s) 647, 648
BsmAI GTCTC 3 cut(s) 407, 1036, 1090
BsmFI GGGAC 2 cut(s) 206, 766
BsmI GAATGC 1 cut(s) 1620
BsnI GGCC 5 cut(s) 68, 366, 735, 785, 1559
BsoBI CYCGRG 1 cut(s) 1943
Bsp119I TTCGAA 2 cut(s) 134, 1612
Bsp1286I GDGCHC 2 cut(s) 997, 1431
Bsp1407I TGTACA 2 cut(s) 741, 1818
Bsp143I GATC 3 cut(s) 880, 1161, 1255
Bsp19I CCATGG 1 cut(s) 1560
BspACI CCGC 5 cut(s) 553, 555, 913, 1750, 1893
BspANI GGCC 5 cut(s) 68, 366, 735, 785, 1559
BspCNI CTCAG 1 cut(s) 226
BspFNI CGCG 1 cut(s) 555
BspLI GGNNCC 4 cut(s) 331, 1110, 1393, 1430
BspMAI CTGCAG 1 cut(s) 1276
BspMI ACCTGC 1 cut(s) 513
BspPI GGATC 1 cut(s) 1263
BspQI GCTCTTC 1 cut(s) 1863
BspT104I TTCGAA 2 cut(s) 134, 1612
BspT107I GGYRCC 1 cut(s) 329
BsrBI CCGCTC 1 cut(s) 913
BsrDI GCAATG 1 cut(s) 51
BsrFI RCCGGY 1 cut(s) 72
BsrGI TGTACA 2 cut(s) 741, 1818
BsrI ACTGG 6 cut(s) 40, 367, 977, 1180, 1330, 1456
BssAI RCCGGY 1 cut(s) 72
BssECI CCNNGG 7 cut(s) 553, 696, 921, 1554, 1560, 1784, 1878
BssMI GATC 3 cut(s) 880, 1161, 1255
BssNI GRCGYC 1 cut(s) 1246
BssT1I CCWWGG 3 cut(s) 1554, 1560, 1878
Bst2UI CCWGG 3 cut(s) 922, 1029, 1785
Bst4CI ACNGT 2 cut(s) 683, 895
Bst6I CTCTTC 4 cut(s) 642, 921, 1056, 1863
BstACI GRCGYC 1 cut(s) 1246
BstAUI TGTACA 2 cut(s) 741, 1818
BstBAI YACGTR 1 cut(s) 1646
BstBI TTCGAA 2 cut(s) 134, 1612
BstC8I GCNNGC 3 cut(s) 46, 826, 1875
BstDEI CTNAG 4 cut(s) 159, 234, 960, 1604
BstDSI CCRYGG 2 cut(s) 553, 1560
BstF5I GGATG 9 cut(s) 24, 381, 658, 694, 1006, 1480, 1720, 1919, 1921
BstFNI CGCG 1 cut(s) 555
BstKTI GATC 3 cut(s) 883, 1164, 1258
BstMAI GTCTC 3 cut(s) 407, 1036, 1090
BstMBI GATC 3 cut(s) 880, 1161, 1255
BstMWI GCNNNNNNNGC 3 cut(s) 118, 488, 1385
BstNI CCWGG 3 cut(s) 922, 1029, 1785
BstNSI RCATGY 2 cut(s) 354, 828
BstPAI GACNNNNGTC 1 cut(s) 275
BstSCI CCNGG 3 cut(s) 920, 1027, 1783
BstSFI CTRYAG 2 cut(s) 945, 1272
BstSLI GKGCMC 1 cut(s) 997
BstUI CGCG 1 cut(s) 555
BstV1I GCAGC 4 cut(s) 53, 275, 1258, 1300
BstV2I GAAGAC 3 cut(s) 947, 1254, 1521
BstXI CCANNNNNNTGG 1 cut(s) 1561
BsuRI GGCC 5 cut(s) 68, 366, 735, 785, 1559
BtgI CCRYGG 2 cut(s) 553, 1560
BtsCI GGATG 9 cut(s) 24, 381, 658, 694, 1006, 1480, 1720, 1919, 1921
BtsI GCAGTG 1 cut(s) 995
BtsIMutI CAGTG 4 cut(s) 231, 360, 995, 1506
BveI ACCTGC 1 cut(s) 513
Cac8I GCNNGC 3 cut(s) 46, 826, 1875
Cfr10I RCCGGY 1 cut(s) 72
Cfr13I GGNCC 1 cut(s) 572
Cfr42I CCGCGG 1 cut(s) 556
CseI GACGC 1 cut(s) 1235
Csp6I GTAC 5 cut(s) 742, 868, 955, 1193, 1819
CspCI CAANNNNNGTGG 4 cut(s) 999, 1034, 1108, 1143
CviQI GTAC 5 cut(s) 742, 868, 955, 1193, 1819
DdeI CTNAG 4 cut(s) 159, 234, 960, 1604
DpnI GATC 3 cut(s) 882, 1163, 1257
DpnII GATC 3 cut(s) 880, 1161, 1255
EaeI YGGCCR 4 cut(s) 66, 364, 733, 783
Eam1104I CTCTTC 4 cut(s) 642, 921, 1056, 1863
EarI CTCTTC 4 cut(s) 642, 921, 1056, 1863
Eco130I CCWWGG 3 cut(s) 1554, 1560, 1878
Eco24I GRGCYC 1 cut(s) 1431
Eco47I GGWCC 1 cut(s) 572
Eco57I CTGAAG 3 cut(s) 956, 1080, 1530
Eco88I CYCGRG 1 cut(s) 1943
EcoRI GAATTC 1 cut(s) 1583
EcoRII CCWGG 3 cut(s) 920, 1027, 1783
EcoT14I CCWWGG 3 cut(s) 1554, 1560, 1878
EcoT22I ATGCAT 3 cut(s) 258, 830, 1921
EcoT38I GRGCYC 1 cut(s) 1431
ErhI CCWWGG 3 cut(s) 1554, 1560, 1878
FalI AAGNNNNNCTT 6 cut(s) 1233, 1265, 1739, 1771, 1967, 1999
FaqI GGGAC 2 cut(s) 206, 766
FauI CCCGC 1 cut(s) 560
FauNDI CATATG 1 cut(s) 517
FbaI TGATCA 1 cut(s) 880
FblI GTMKAC 2 cut(s) 279, 1330
Fnu4HI GCNGC 5 cut(s) 42, 264, 1272, 1314, 1893
FokI GGATG 9 cut(s) 11, 368, 665, 701, 993, 1467, 1727, 1906, 1928
FriOI GRGCYC 1 cut(s) 1431
Fsp4HI GCNGC 5 cut(s) 42, 264, 1272, 1314, 1893
FspBI CTAG 2 cut(s) 344, 1403
GluI GCNGC 5 cut(s) 42, 264, 1272, 1314, 1893
GsuI CTGGAG 1 cut(s) 513
HaeIII GGCC 5 cut(s) 68, 366, 735, 785, 1559
HapII CCGG 1 cut(s) 73
HgaI GACGC 1 cut(s) 1235
Hin1I GRCGYC 1 cut(s) 1246
HincII GTYRAC 4 cut(s) 217, 280, 891, 1687
HindII GTYRAC 4 cut(s) 217, 280, 891, 1687
HindIII AAGCTT 1 cut(s) 119
HpaII CCGG 1 cut(s) 73
HphI GGTGA 4 cut(s) 80, 422, 992, 1648
Hpy188I TCNGA 7 cut(s) 141, 820, 885, 910, 1075, 1284, 1630
Hpy99I CGWCG 1 cut(s) 169
HpyAV CCTTC 3 cut(s) 161, 754, 1125
HpyCH4III ACNGT 2 cut(s) 683, 895
HpyCH4IV ACGT 1 cut(s) 1645
HpyF10VI GCNNNNNNNGC 3 cut(s) 118, 488, 1385
HpyF3I CTNAG 4 cut(s) 159, 234, 960, 1604
HpySE526I ACGT 1 cut(s) 1645
Hsp92I GRCGYC 1 cut(s) 1246
Ksp22I TGATCA 1 cut(s) 880
KspI CCGCGG 1 cut(s) 556
Kzo9I GATC 3 cut(s) 880, 1161, 1255
LguI GCTCTTC 1 cut(s) 1863
LmnI GCTCC 4 cut(s) 494, 669, 1434, 1570
Lsp1109I GCAGC 4 cut(s) 53, 275, 1258, 1300
LweI GCATC 7 cut(s) 415, 458, 837, 1014, 1462, 1906, 1928
MaeI CTAG 2 cut(s) 344, 1403
MaeII ACGT 1 cut(s) 1645
MaeIII GTNAC 4 cut(s) 86, 358, 1321, 1646
MalI GATC 3 cut(s) 882, 1163, 1257
MbiI CCGCTC 1 cut(s) 913
MboI GATC 3 cut(s) 880, 1161, 1255
MfeI CAATTG 1 cut(s) 1863
MhlI GDGCHC 2 cut(s) 997, 1431
MlsI TGGCCA 4 cut(s) 68, 366, 735, 785
MluNI TGGCCA 4 cut(s) 68, 366, 735, 785
MlyI GAGTC 3 cut(s) 245, 809, 1085
Mox20I TGGCCA 4 cut(s) 68, 366, 735, 785
Mph1103I ATGCAT 3 cut(s) 258, 830, 1921
MroXI GAANNNNTTC 4 cut(s) 711, 1371, 1583, 1937
MscI TGGCCA 4 cut(s) 68, 366, 735, 785
MseI TTAA 4 cut(s) 186, 1290, 1308, 2014
MslI CAYNNNNRTG 2 cut(s) 651, 1050
Msp20I TGGCCA 4 cut(s) 68, 366, 735, 785
MspA1I CMGCKG 2 cut(s) 44, 555
MspI CCGG 1 cut(s) 73
MspR9I CCNGG 3 cut(s) 922, 1029, 1785
MunI CAATTG 1 cut(s) 1863
Mva1269I GAATGC 1 cut(s) 1620
MvaI CCWGG 3 cut(s) 922, 1029, 1785
MvnI CGCG 1 cut(s) 555
MwoI GCNNNNNNNGC 3 cut(s) 118, 488, 1385
NcoI CCATGG 1 cut(s) 1560
NdeI CATATG 1 cut(s) 517
NdeII GATC 3 cut(s) 880, 1161, 1255
NlaIV GGNNCC 4 cut(s) 331, 1110, 1393, 1430
NmeAIII GCCGAG 1 cut(s) 721
NmuCI GTSAC 3 cut(s) 86, 358, 1321
NsiI ATGCAT 3 cut(s) 258, 830, 1921
NspI RCATGY 2 cut(s) 354, 828
NspV TTCGAA 2 cut(s) 134, 1612
PaeI GCATGC 1 cut(s) 828
PciSI GCTCTTC 1 cut(s) 1863
PctI GAATGC 1 cut(s) 1620
PdmI GAANNNNTTC 4 cut(s) 711, 1371, 1583, 1937
PfeI GAWTC 7 cut(s) 136, 598, 964, 1222, 1352, 1807, 1964
PflFI GACNNNGTC 1 cut(s) 212
PkrI GCNGC 5 cut(s) 43, 265, 1273, 1315, 1894
PleI GAGTC 3 cut(s) 244, 809, 1084
PpsI GAGTC 3 cut(s) 244, 809, 1084
Ppu21I YACGTR 1 cut(s) 1646
PshAI GACNNNNGTC 1 cut(s) 275
PsiI TTATAA 2 cut(s) 545, 1152
Psp6I CCWGG 3 cut(s) 920, 1027, 1783
PspGI CCWGG 3 cut(s) 920, 1027, 1783
PspN4I GGNNCC 4 cut(s) 331, 1110, 1393, 1430
PspPI GGNCC 1 cut(s) 572
PstI CTGCAG 1 cut(s) 1276
PsyI GACNNNGTC 1 cut(s) 212
PvuII CAGCTG 1 cut(s) 44
RsaI GTAC 5 cut(s) 743, 869, 956, 1194, 1820
RsaNI GTAC 5 cut(s) 742, 868, 955, 1193, 1819
RseI CAYNNNNRTG 2 cut(s) 651, 1050
SacII CCGCGG 1 cut(s) 556
SalI GTCGAC 1 cut(s) 278
SapI GCTCTTC 1 cut(s) 1863
SaqAI TTAA 4 cut(s) 186, 1290, 1308, 2014
SatI GCNGC 5 cut(s) 42, 264, 1272, 1314, 1893
Sau3AI GATC 3 cut(s) 880, 1161, 1255
Sau96I GGNCC 1 cut(s) 572
SchI GAGTC 3 cut(s) 245, 809, 1085
ScrFI CCNGG 3 cut(s) 922, 1029, 1785
SduI GDGCHC 2 cut(s) 997, 1431
SfaNI GCATC 7 cut(s) 415, 458, 837, 1014, 1462, 1906, 1928
SfcI CTRYAG 2 cut(s) 945, 1272
Sfr303I CCGCGG 1 cut(s) 556
SfuI TTCGAA 2 cut(s) 134, 1612
SgrBI CCGCGG 1 cut(s) 556
SinI GGWCC 1 cut(s) 572
SmiMI CAYNNNNRTG 2 cut(s) 651, 1050
SmlI CTYRAG 3 cut(s) 1087, 1250, 1756
SmoI CTYRAG 3 cut(s) 1087, 1250, 1756
SphI GCATGC 1 cut(s) 828
SsiI CCGC 5 cut(s) 553, 555, 913, 1750, 1893
SspI AATATT 2 cut(s) 748, 1288
SspMI CTAG 2 cut(s) 344, 1403
StyD4I CCNGG 3 cut(s) 920, 1027, 1783
StyI CCWWGG 3 cut(s) 1554, 1560, 1878
TaaI ACNGT 2 cut(s) 683, 895
TaiI ACGT 1 cut(s) 1648
TaqI TCGA 9 cut(s) 134, 239, 279, 303, 1099, 1375, 1587, 1612, 1737
TaqII GACCGA 1 cut(s) 1248
TatI WGTACW 3 cut(s) 741, 1192, 1818
TauI GCSGC 1 cut(s) 1895
TfiI GAWTC 7 cut(s) 136, 598, 964, 1222, 1352, 1807, 1964
Tru1I TTAA 4 cut(s) 186, 1290, 1308, 2014
Tru9I TTAA 4 cut(s) 186, 1290, 1308, 2014
TscAI CASTG 4 cut(s) 238, 367, 1002, 1513
TseFI GTSAC 3 cut(s) 86, 358, 1321
TseI GCWGC 4 cut(s) 41, 263, 1271, 1313
Tsp45I GTSAC 3 cut(s) 86, 358, 1321
TspRI CASTG 4 cut(s) 238, 367, 1002, 1513
Tth111I GACNNNGTC 1 cut(s) 212
VpaK11BI GGWCC 1 cut(s) 572
XapI RAATTY 1 cut(s) 1583
XbaI TCTAGA 1 cut(s) 343
XceI RCATGY 2 cut(s) 354, 828
XcmI CCANNNNNNNNNTGG 1 cut(s) 1845
XmiI GTMKAC 2 cut(s) 279, 1330
XmnI GAANNNNTTC 4 cut(s) 711, 1371, 1583, 1937
XspI CTAG 2 cut(s) 344, 1403
Zsp2I ATGCAT 3 cut(s) 258, 830, 1921
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.