pycom11g19390

Cytochrome p450

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
21881652 .. 21882708
1057 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g19390.2

Sequence Viewer

Length: 789 bp
ATGAAGGCTGTTAACAATGTGTTTGATGATTTTTACGAGAAGATTATTGACGAGCATCTTCAATCCAAGGATACAGAAAGAACGAAGGACTTTAATGATGCCATCCTGGCCTACATGGGGTCTGAAGAATCGGACTACCGAATCGAACGCTTGAATATCAAAGCCATGATGTCGGACATGTTAGTGGCCTCAGCGGACACATCATCAACAACTGTCTTGTGGGCGCTCTCGGAACTCATGAGGCATCCACAGGTTATGAAGAAAGTCCAAAAGGAGATAGAAAATGTTGTAGGTCTGAATAGAATGGTGGAGGAATCAGACACGGAGAAATTGGAGTATTTGGATATGGTAGTGAAGGAAACCATGAGGCTACATCCTGTGTTACCATTGTTGCTTCCTCATGCAGCCATCGAAGATTGCACTGTCGATGGCTACCACATACCGAAAAAGCCAAGCATTATCGTAAACGTGTGGGCAATCGTGAGAGACCCAAGTGCTTGGGAAGATGCAGAGAAGTTCGTACCAGAGAGGTTTGAGGATAGCAATGTTGATGTTAGAGGACACCACTTTCAGATTCTACCGTTTGGCCCTGGCAGAAGACGTTGCGTTGGAATGCAGTTAGGGATTACTGTGGTACACTTTGTGTTGGCTCAGCTTGTGCATTGTTTTGATTGGGAACTTCCAGATAACATGTTGCCAAATGAGTTGGATATGACTGAGGAGTTTGGTCTTCCAGTTTCAAGGGCCAAGAATCTGCTCGCTATTCCTTCATATCGCCTTCAGAATTGA

Protein Analysis

263

Amino Acids

30.16

Weight (kDa)

5.02

Isoelectric Point (pI)

48.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000398)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21960 FvH4_3g24140 FvH4_3g24150 FvH4_7g09230 FvH4_7g09260
malus_domestica MD00G1169700.v1.1 MD00G1169800.v1.1 MD01G1016400.v1.1 MD03G1188000.v1.1 MD03G1188100.v1.1 MD11G1219700.v1.1 MD11G1219900.v1.1 MD11G1220200.v1.1 MD11G1220400.v1.1 MD11G1220600.v1.1
prunus_persica Prupe.2G006500_v2.0.a1 Prupe.4G235500_v2.0.a1 Prupe.4G235600_v2.0.a1 Prupe.4G235700_v2.0.a1 Prupe.4G235700_v2.0.a1 Prupe.4G235800_v2.0.a1 Prupe.4G235900_v2.0.a1 Prupe.6G176500_v2.0.a1
pyrus_communis pycom01g04750 pycom03g14060 pycom11g19360 pycom11g19370 pycom11g19380 pycom11g19390 pycom11g19400 pycom11g19460
rosa_chinensis RchiOBHm_Chr1g0345321 RchiOBHm_Chr1g0345511 RchiOBHm_Chr1g0345781 RchiOBHm_Chr2g0115981 RchiOBHm_Chr5g0043151 RchiOBHm_Chr5g0043161 RchiOBHm_Chr5g0043901 RchiOBHm_Chr6g0274841
rosa_laevigata RLG00000013516 RLG00000018229 RLG00000028840 RLG00000028923 RLG00000034169 RLG00000034223
rosa_multiflora Rmu_co8474237.1_g000001 Rmu_sc0000698.1_g000004 Rmu_sc0000698.1_g000021 Rmu_sc0000698.1_g000023 Rmu_sc0000698.1_g000056 Rmu_sc0000698.1_g000057 Rmu_sc0000698.1_g000122 Rmu_sc0000698.1_g000123 Rmu_sc0000698.1_g000124 Rmu_sc0001292.1_g000005 Rmu_sc0001292.1_g000006 Rmu_sc0001349.1_g000002 Rmu_sc0001692.1_g000035 Rmu_sc0002079.1_g000035 Rmu_sc0002079.1_g000045 Rmu_sc0002329.1_g000017 Rmu_sc0008148.1_g000056 Rmu_sc0008148.1_g000057 Rmu_sc0008148.1_g000058 Rmu_sc0008148.1_g000062 Rmu_sc0008611.1_g000010 Rmu_sc0009227.1_g000007
rosa_roxburghii Rroxscaffold_1G00011260 Rroxscaffold_1G00037590 Rroxscaffold_2G00127610 Rroxscaffold_4G00309120 Rroxscaffold_7G00193880
rosa_rugosa Rorug01G0177400 Rorug02G0202400 Rorug05G0204600 Rorug05G0209000 Rorug06G0085100 Rorug06G0085200
rosa_samantha Rh1BG154400 Rh1DG186600 Rh2CG265200 Rh2DG267000 Rh5AG289700 Rh5AG289800 Rh5AG290000 Rh5AG293200 Rh5CG326500 Rh5DG305700 Rh5DG305800 Rh5DG310100 Rh6BG204200 Rh6CG204500 Rh6DG195700
rosa_wichuraiana Rw1G016100 Rw1G016470 Rw2G020290 Rw5G026830 Rw5G026910 Rw5G026920 Rw5G026930 Rw6G017460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 194
AcuI CTGAAG 2 cut(s) 144, 764
AdeI CACNNNGTG 1 cut(s) 643
AfaI GTAC 2 cut(s) 522, 636
AfiI CCNNNNNNNGG 1 cut(s) 117
AflIII ACRYGT 3 cut(s) 177, 468, 690
AgsI TTSAA 3 cut(s) 62, 154, 741
AjnI CCWGG 2 cut(s) 105, 589
AluBI AGCT 1 cut(s) 655
AluI AGCT 1 cut(s) 655
Alw26I GTCTC 1 cut(s) 480
AoxI GGCC 4 cut(s) 108, 186, 586, 744
ApeKI GCWGC 1 cut(s) 404
AspLEI GCGC 1 cut(s) 226
AspS9I GGNCC 2 cut(s) 587, 744
BbsI GAAGAC 2 cut(s) 604, 722
BbvCI CCTCAGC 1 cut(s) 190
BbvI GCAGC 1 cut(s) 416
BccI CCATC 3 cut(s) 110, 416, 422
BciT130I CCWGG 2 cut(s) 107, 591
BciVI GTATCC 1 cut(s) 64
BcoDI GTCTC 1 cut(s) 480
BfoI RGCGCY 1 cut(s) 227
BfuI GTATCC 1 cut(s) 64
BglI GCCNNNNNGGC 1 cut(s) 107
BisI GCNGC 1 cut(s) 405
BlpI GCTNAGC 1 cut(s) 651
BlsI GCNGC 1 cut(s) 406
Bme1390I CCNGG 2 cut(s) 107, 591
BmgT120I GGNCC 2 cut(s) 587, 744
BmrFI CCNGG 2 cut(s) 107, 591
BmsI GCATC 4 cut(s) 64, 88, 253, 496
BpiI GAAGAC 2 cut(s) 604, 722
Bpu10I CCTNAGC 1 cut(s) 190
Bpu1102I GCTNAGC 1 cut(s) 651
BsaI GGTCTC 1 cut(s) 480
BsaJI CCNNGG 2 cut(s) 66, 589
Bsc4I CCNNNNNNNGG 1 cut(s) 117
Bse1I ACTGG 1 cut(s) 734
Bse3DI GCAATG 1 cut(s) 550
BseBI CCWGG 2 cut(s) 107, 591
BseDI CCNNGG 2 cut(s) 66, 589
BseGI GGATG 3 cut(s) 102, 244, 373
BseLI CCNNNNNNNGG 1 cut(s) 117
BseMI GCAATG 1 cut(s) 550
BseMII CTCAG 3 cut(s) 204, 665, 708
BseNI ACTGG 1 cut(s) 734
BseRI GAGGAG 1 cut(s) 734
BseXI GCAGC 1 cut(s) 416
BshFI GGCC 4 cut(s) 110, 188, 588, 746
BslI CCNNNNNNNGG 1 cut(s) 117
BsmAI GTCTC 1 cut(s) 480
BsmI GAATGC 1 cut(s) 618
BsnI GGCC 4 cut(s) 110, 188, 588, 746
Bso31I GGTCTC 1 cut(s) 480
Bsp1720I GCTNAGC 1 cut(s) 651
BspACI CCGC 1 cut(s) 194
BspANI GGCC 4 cut(s) 110, 188, 588, 746
BspCNI CTCAG 3 cut(s) 203, 664, 709
BspHI TCATGA 1 cut(s) 237
BspTNI GGTCTC 1 cut(s) 480
BsrDI GCAATG 1 cut(s) 550
BsrI ACTGG 1 cut(s) 734
BssECI CCNNGG 2 cut(s) 66, 589
BssT1I CCWWGG 1 cut(s) 66
Bst2UI CCWGG 2 cut(s) 107, 591
Bst4CI ACNGT 4 cut(s) 214, 424, 582, 631
BstC8I GCNNGC 1 cut(s) 759
BstDEI CTNAG 3 cut(s) 190, 651, 717
BstF5I GGATG 3 cut(s) 102, 244, 373
BstH2I RGCGCY 1 cut(s) 227
BstHHI GCGC 1 cut(s) 226
BstMAI GTCTC 1 cut(s) 480
BstMWI GCNNNNNNNGC 1 cut(s) 107
BstNI CCWGG 2 cut(s) 107, 591
BstNSI RCATGY 2 cut(s) 181, 694
BstSCI CCNGG 2 cut(s) 105, 589
BstV1I GCAGC 1 cut(s) 416
BstV2I GAAGAC 2 cut(s) 604, 722
BstXI CCANNNNNNTGG 1 cut(s) 498
BsuI GTATCC 1 cut(s) 64
BsuRI GGCC 4 cut(s) 110, 188, 588, 746
BtsCI GGATG 3 cut(s) 102, 244, 373
BtsIMutI CAGTG 1 cut(s) 420
Cac8I GCNNGC 1 cut(s) 759
CciI TCATGA 1 cut(s) 237
CfoI GCGC 1 cut(s) 226
Cfr13I GGNCC 2 cut(s) 587, 744
Csp6I GTAC 2 cut(s) 521, 635
CviAII CATG 7 cut(s) 115, 166, 178, 238, 364, 401, 691
CviQI GTAC 2 cut(s) 521, 635
DdeI CTNAG 3 cut(s) 190, 651, 717
DraIII CACNNNGTG 1 cut(s) 643
Eco130I CCWWGG 1 cut(s) 66
Eco31I GGTCTC 1 cut(s) 480
Eco57I CTGAAG 2 cut(s) 144, 764
EcoRII CCWGG 2 cut(s) 105, 589
EcoT14I CCWWGG 1 cut(s) 66
ErhI CCWWGG 1 cut(s) 66
FaeI CATG 7 cut(s) 118, 169, 181, 241, 367, 404, 694
FatI CATG 7 cut(s) 114, 165, 177, 237, 363, 400, 690
Fnu4HI GCNGC 1 cut(s) 405
FokI GGATG 3 cut(s) 89, 231, 360
Fsp4HI GCNGC 1 cut(s) 405
GlaI GCGC 1 cut(s) 225
GluI GCNGC 1 cut(s) 405
HaeII RGCGCY 1 cut(s) 227
HaeIII GGCC 4 cut(s) 110, 188, 588, 746
HhaI GCGC 1 cut(s) 226
Hin1II CATG 7 cut(s) 118, 169, 181, 241, 367, 404, 694
Hin6I GCGC 1 cut(s) 224
HinP1I GCGC 1 cut(s) 224
HincII GTYRAC 1 cut(s) 13
HindII GTYRAC 1 cut(s) 13
HinfI GANTC 5 cut(s) 128, 141, 314, 574, 751
HpaI GTTAAC 1 cut(s) 13
Hpy166II GTNNAC 3 cut(s) 13, 466, 637
Hpy188I TCNGA 8 cut(s) 124, 133, 175, 232, 297, 319, 573, 783
Hpy188III TCNNGA 3 cut(s) 238, 481, 683
Hpy8I GTNNAC 3 cut(s) 13, 466, 637
HpyAV CCTTC 4 cut(s) 79, 349, 777, 788
HpyCH4III ACNGT 4 cut(s) 214, 424, 582, 631
HpyCH4IV ACGT 2 cut(s) 468, 601
HpyCH4V TGCA 5 cut(s) 404, 420, 509, 616, 661
HpyF10VI GCNNNNNNNGC 1 cut(s) 107
HpyF3I CTNAG 3 cut(s) 190, 651, 717
HpySE526I ACGT 2 cut(s) 468, 601
Hsp92II CATG 7 cut(s) 118, 169, 181, 241, 367, 404, 694
HspAI GCGC 1 cut(s) 224
KspAI GTTAAC 1 cut(s) 13
LpnPI CCDG 9 cut(s) 92, 119, 236, 390, 537, 576, 603, 696, 747
Lsp1109I GCAGC 1 cut(s) 416
LweI GCATC 4 cut(s) 64, 88, 253, 496
MaeII ACGT 2 cut(s) 468, 601
MaeIII GTNAC 1 cut(s) 381
MboII GAAGA 8 cut(s) 50, 52, 137, 271, 425, 515, 609, 722
MluCI AATT 2 cut(s) 329, 784
MmeI TCCRAC 3 cut(s) 153, 589, 687
MnlI CCTC 9 cut(s) 199, 234, 304, 360, 408, 522, 529, 551, 712
MseI TTAA 2 cut(s) 12, 93
MslI CAYNNNNRTG 1 cut(s) 182
MspA1I CMGCKG 1 cut(s) 194
MspR9I CCNGG 2 cut(s) 107, 591
Mva1269I GAATGC 1 cut(s) 618
MvaI CCWGG 2 cut(s) 107, 591
MwoI GCNNNNNNNGC 1 cut(s) 107
NlaIII CATG 7 cut(s) 118, 169, 181, 241, 367, 404, 694
NspI RCATGY 2 cut(s) 181, 694
PagI TCATGA 1 cut(s) 237
PciI ACATGT 2 cut(s) 177, 690
PctI GAATGC 1 cut(s) 618
PfeI GAWTC 5 cut(s) 128, 141, 314, 574, 751
PkrI GCNGC 1 cut(s) 406
PscI ACATGT 2 cut(s) 177, 690
Psp6I CCWGG 2 cut(s) 105, 589
PspGI CCWGG 2 cut(s) 105, 589
PspPI GGNCC 2 cut(s) 587, 744
RsaI GTAC 2 cut(s) 522, 636
RsaNI GTAC 2 cut(s) 521, 635
RseI CAYNNNNRTG 1 cut(s) 182
SaqAI TTAA 2 cut(s) 12, 93
SatI GCNGC 1 cut(s) 405
Sau96I GGNCC 2 cut(s) 587, 744
ScrFI CCNGG 2 cut(s) 107, 591
SetI ASST 6 cut(s) 255, 295, 471, 533, 604, 657
SfaNI GCATC 4 cut(s) 64, 88, 253, 496
SmiMI CAYNNNNRTG 1 cut(s) 182
Sse9I AATT 2 cut(s) 329, 784
SsiI CCGC 1 cut(s) 194
StyD4I CCNGG 2 cut(s) 105, 589
StyI CCWWGG 1 cut(s) 66
TaaI ACNGT 4 cut(s) 214, 424, 582, 631
TaiI ACGT 2 cut(s) 471, 604
TaqI TCGA 3 cut(s) 144, 411, 426
TasI AATT 2 cut(s) 329, 784
TfiI GAWTC 5 cut(s) 128, 141, 314, 574, 751
Tru1I TTAA 2 cut(s) 12, 93
Tru9I TTAA 2 cut(s) 12, 93
TscAI CASTG 1 cut(s) 427
TseI GCWGC 1 cut(s) 404
TspDTI ATGAA 3 cut(s) 17, 272, 759
TspGWI ACGGA 1 cut(s) 338
TspRI CASTG 1 cut(s) 427
XceI RCATGY 2 cut(s) 181, 694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.