Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0000398

Physical Location & Seq

Genomic Coordinates Forward (+)

32199734 .. 32201498

Gene Structure 1765 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1219900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1497 bp

ATGGCACTTTGGGTTTGGTTAACAATTGGGGTGCTTGCCCTTGTTCGCATCGTGCAAGCATGCATATCAAAAGGCAAGAACAAAAACAAGATGTTACCTCCTGGTCCGAGAGGGTTTCCTATTTTTGGCAGCCTCCATTTGTTAGGGAAGTTCCCTACCATGGATCTTCATCAACTAGCCCAGAAATACGGTGACATCATGTACTTGAGGTTAGGCCTCCAGCATACCGTGGTCGTCTCGTCCACACGAGCGGCCGAGCTGTTCCTCAAAACCCACGACCTTAACTTTGCAAGTAGACCACCTAATGAAGGTGCAAAGCACCTCATCTTTGGGCAAAGAAGCTTGAGCTTTGCTGAGTATGGCTCGTATTGGACCAACATGCGAAAGATTTGCATGCTCGAATTACTTAGCAACCAAAAGATCAACTCTTTCAAGTCCATGAGGAGAGAAGAGGTTGCTCTCTTGATAAAATCTGTTCAAGACGACGCCAATAGTCGACGCATTGCTAATGTGACTGACAAGGTCTCGTCGCTCGGGATCAACATGACCTGCCGGATGGTGTTTGGGAAGAAGTACAAGGACGAGGAGTTTGGCGGGAGGGGTTTCGCGTCTGTGATGAAAGAGGGTATGAAACTAGCAGCAGCACCTAACTTGGGAGATTTCATTCCTTGTATTGCACCGCTTGACCTGCAAGGGCTCACTAAAAAAATGAAGGCTGTTAACAAGGCGTTTGATGAATTTTTTGAGAAGGTTATTGACGAGCATCTTCAATACAAGGATAAAGAAAGAACAAAGGACTTCATCGATGCCATGCTGGCCCACATGGGGTCTGAAGGATCCGACTACCGAATCGAACGCTTGAATATCAAAGCCATGATGTCGGACATGTTCGCGGCTTCAGCGGACACATCATCAACAACAGTCCAGTGGGCGCTCTCGGAACTCTTGAGGCATCCACAGGTTATGAAGAAAGTCCAAAAGGAGTTAGAAAATGTTGTAGGCCTCAAAAGAATGGTGGAGGAATCAGACATGGAGAAATTAGAGTATTTGGACATGGTAGTGAAGGAAACCATGAGGCTACATCCTGTGGTACCATTGTTGCTTCCTCATGCAGCCATCGAAGATTGCACTGTCGATGGCTACCACATACCGAAGAAGTCACGCGTTATTGTAAATGCGTGGGCAATCGGGAGAGACCCGAGTGCTTGGGAAGATGCAGAGAAGTTCGTACCAGAGAGGTTTGAGGGTAACAATGTTGATGTTAGAGGACACCACTTTCAGCTTGTACCGTTTGGCTCTGGCAGAAGACGTTGTGTTGGAATGCAGTTAGGGATTACTGTGGTACACTTTGTGTTGGCACAGCTTGTGCATTGTTTTGATTGGGAACTTCCAGATAACATGCTGCCAAATGAGTTGGATATGACTGAGGAGTTTGGTCTAGTAGTTTCAAGGGCCAAGAATCTGCTCGCTATTCCCTCATATCGCCTTCAGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0008150 GO:0008152 GO:0009058 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0012505 GO:0016020 GO:0019748 GO:0031090 GO:0031984 GO:0042175 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0050896 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

499

Amino Acids

56.46

Weight (kDa)

8.75

Isoelectric Point (pI)

34.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	33 - 480	2.8e-109	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000398)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g21960 FvH4_3g24140 FvH4_3g24150 FvH4_7g09230 FvH4_7g09260
malus_domestica	MD00G1169700.v1.1 MD00G1169800.v1.1 MD01G1016400.v1.1 MD03G1188000.v1.1 MD03G1188100.v1.1 MD11G1219700.v1.1 MD11G1219900.v1.1 MD11G1220200.v1.1 MD11G1220400.v1.1 MD11G1220600.v1.1
prunus_persica	Prupe.2G006500_v2.0.a1 Prupe.4G235500_v2.0.a1 Prupe.4G235600_v2.0.a1 Prupe.4G235700_v2.0.a1 Prupe.4G235700_v2.0.a1 Prupe.4G235800_v2.0.a1 Prupe.4G235900_v2.0.a1 Prupe.6G176500_v2.0.a1
pyrus_communis	pycom01g04750 pycom03g14060 pycom11g19360 pycom11g19370 pycom11g19380 pycom11g19390 pycom11g19400 pycom11g19460
rosa_chinensis	RchiOBHm_Chr1g0345321 RchiOBHm_Chr1g0345511 RchiOBHm_Chr1g0345781 RchiOBHm_Chr2g0115981 RchiOBHm_Chr5g0043151 RchiOBHm_Chr5g0043161 RchiOBHm_Chr5g0043901 RchiOBHm_Chr6g0274841
rosa_laevigata	RLG00000013516 RLG00000018229 RLG00000028840 RLG00000028923 RLG00000034169 RLG00000034223
rosa_multiflora	Rmu_co8474237.1_g000001 Rmu_sc0000698.1_g000004 Rmu_sc0000698.1_g000021 Rmu_sc0000698.1_g000023 Rmu_sc0000698.1_g000056 Rmu_sc0000698.1_g000057 Rmu_sc0000698.1_g000122 Rmu_sc0000698.1_g000123 Rmu_sc0000698.1_g000124 Rmu_sc0001292.1_g000005 Rmu_sc0001292.1_g000006 Rmu_sc0001349.1_g000002 Rmu_sc0001692.1_g000035 Rmu_sc0002079.1_g000035 Rmu_sc0002079.1_g000045 Rmu_sc0002329.1_g000017 Rmu_sc0008148.1_g000056 Rmu_sc0008148.1_g000057 Rmu_sc0008148.1_g000058 Rmu_sc0008148.1_g000062 Rmu_sc0008611.1_g000010 Rmu_sc0009227.1_g000007
rosa_roxburghii	Rroxscaffold_1G00011260 Rroxscaffold_1G00037590 Rroxscaffold_2G00127610 Rroxscaffold_4G00309120 Rroxscaffold_7G00193880
rosa_rugosa	Rorug01G0177400 Rorug02G0202400 Rorug05G0204600 Rorug05G0209000 Rorug06G0085100 Rorug06G0085200
rosa_samantha	Rh1BG154400 Rh1DG186600 Rh2CG265200 Rh2DG267000 Rh5AG289700 Rh5AG289800 Rh5AG290000 Rh5AG293200 Rh5CG326500 Rh5DG305700 Rh5DG305800 Rh5DG310100 Rh6BG204200 Rh6CG204500 Rh6DG195700
rosa_wichuraiana	Rw1G016100 Rw1G016470 Rw2G020290 Rw5G026830 Rw5G026910 Rw5G026920 Rw5G026930 Rw6G017460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	557, 696
Acc65I	GGTACC	1 cut(s)	1090
AccB1I	GGYRCC	1 cut(s)	1090
AccBSI	CCGCTC	1 cut(s)	251
AccI	GTMKAC	2 cut(s)	295, 496
AccII	CGCG	3 cut(s)	608, 893, 1164
AciI	CCGC	5 cut(s)	251, 594, 680, 893, 902
AclWI	GGATC	4 cut(s)	171, 545, 831, 844
AcoI	YGGCCR	1 cut(s)	252
AcsI	RAATTY	1 cut(s)	737
AcuI	CTGAAG	3 cut(s)	852, 882, 1472
AcyI	GRCGYC	1 cut(s)	486
AdeI	CACNNNGTG	1 cut(s)	1351
AfaI	GTAC	6 cut(s)	203, 575, 1092, 1230, 1287, 1344
AfiI	CCNNNNNNNGG	5 cut(s)	125, 160, 308, 653, 825
AflIII	ACRYGT	2 cut(s)	885, 1162
AgsI	TTSAA	5 cut(s)	433, 479, 770, 862, 1449
AjnI	CCWGG	1 cut(s)	100
AluBI	AGCT	5 cut(s)	259, 342, 348, 1282, 1363
AluI	AGCT	5 cut(s)	259, 342, 348, 1282, 1363
Alw26I	GTCTC	3 cut(s)	241, 529, 1188
AlwI	GGATC	4 cut(s)	171, 545, 831, 844
Ama87I	CYCGRG	2 cut(s)	533, 1198
AoxI	GGCC	5 cut(s)	214, 252, 816, 1000, 1452
ApeKI	GCWGC	5 cut(s)	129, 638, 641, 1112, 1402
ApoI	RAATTY	1 cut(s)	737
ArsI	GACNNNNNNTTYG	4 cut(s)	269, 301, 572, 604
Asp718I	GGTACC	1 cut(s)	1090
AspLEI	GCGC	1 cut(s)	934
AspS9I	GGNCC	4 cut(s)	104, 372, 817, 1452
AsuHPI	GGTGA	1 cut(s)	203
AvaI	CYCGRG	2 cut(s)	533, 1198
AvaII	GGWCC	2 cut(s)	104, 372
BaeI	ACNNNNGTAYC	2 cut(s)	1082, 1115
BamHI	GGATCC	1 cut(s)	836
BanI	GGYRCC	1 cut(s)	1090
BanII	GRGCYC	1 cut(s)	699
BauI	CACGAG	1 cut(s)	246
BbsI	GAAGAC	1 cut(s)	1312
BbvI	GCAGC	5 cut(s)	141, 650, 653, 1124, 1389
BccI	CCATC	3 cut(s)	550, 1124, 1130
BcgI	CGANNNNNNTGC	2 cut(s)	372, 406
BciT130I	CCWGG	1 cut(s)	102
BcoDI	GTCTC	3 cut(s)	241, 529, 1188
BfaI	CTAG	3 cut(s)	176, 635, 1439
BfoI	RGCGCY	1 cut(s)	935
BfuAI	ACCTGC	2 cut(s)	557, 696
BglI	GCCNNNNNGGC	1 cut(s)	815
BisI	GCNGC	7 cut(s)	130, 252, 639, 642, 894, 1113, 1403
BlsI	GCNGC	7 cut(s)	131, 253, 640, 643, 895, 1114, 1404
Bme1390I	CCNGG	1 cut(s)	102
Bme18I	GGWCC	2 cut(s)	104, 372
BmeT110I	CYCGRG	2 cut(s)	533, 1198
BmgT120I	GGNCC	4 cut(s)	104, 372, 817, 1452
BmiI	GGNNCC	2 cut(s)	838, 1092
BmrFI	CCNGG	1 cut(s)	102
BmsI	GCATC	5 cut(s)	57, 772, 796, 961, 1204
BpiI	GAAGAC	1 cut(s)	1312
BplI	GAGNNNNNCTC	2 cut(s)	347, 379
BpmI	CTGGAG	1 cut(s)	203
BpuEI	CTTGAG	3 cut(s)	226, 364, 967
Bsa29I	ATCGAT	1 cut(s)	804
BsaBI	GATNNNNATC	1 cut(s)	168
BsaHI	GRCGYC	1 cut(s)	486
BsaI	GGTCTC	2 cut(s)	529, 1188
BsaJI	CCNNGG	2 cut(s)	159, 228
Bsc4I	CCNNNNNNNGG	5 cut(s)	125, 160, 308, 653, 825
Bse1I	ACTGG	1 cut(s)	925
Bse3DI	GCAATG	1 cut(s)	501
Bse8I	GATNNNNATC	1 cut(s)	168
BseBI	CCWGG	1 cut(s)	102
BseCI	ATCGAT	1 cut(s)	804
BseDI	CCNNGG	2 cut(s)	159, 228
BseGI	GGATG	3 cut(s)	561, 952, 1081
BseJI	GATNNNNATC	1 cut(s)	168
BseLI	CCNNNNNNNGG	5 cut(s)	125, 160, 308, 653, 825
BseMI	GCAATG	1 cut(s)	501
BseMII	CTCAG	2 cut(s)	345, 1416
BseNI	ACTGG	1 cut(s)	925
BseRI	GAGGAG	3 cut(s)	457, 599, 1442
BseX3I	CGGCCG	1 cut(s)	252
BseXI	GCAGC	5 cut(s)	141, 650, 653, 1124, 1389
Bsh1236I	CGCG	3 cut(s)	608, 893, 1164
Bsh1285I	CGRYCG	1 cut(s)	255
BshFI	GGCC	5 cut(s)	216, 254, 818, 1002, 1454
BshNI	GGYRCC	1 cut(s)	1090
BshVI	ATCGAT	1 cut(s)	804
BsiEI	CGRYCG	1 cut(s)	255
BsiHKCI	CYCGRG	2 cut(s)	533, 1198
BsiSI	CCGG	1 cut(s)	553
BslI	CCNNNNNNNGG	5 cut(s)	125, 160, 308, 653, 825
BsmAI	GTCTC	3 cut(s)	241, 529, 1188
BsmBI	CGTCTC	1 cut(s)	241
BsmI	GAATGC	1 cut(s)	1326
BsnI	GGCC	5 cut(s)	216, 254, 818, 1002, 1454
Bso31I	GGTCTC	2 cut(s)	529, 1188
BsoBI	CYCGRG	2 cut(s)	533, 1198
Bsp1286I	GDGCHC	1 cut(s)	699
Bsp143I	GATC	4 cut(s)	163, 420, 537, 836
Bsp19I	CCATGG	1 cut(s)	159
BspACI	CCGC	5 cut(s)	251, 594, 680, 893, 902
BspANI	GGCC	5 cut(s)	216, 254, 818, 1002, 1454
BspCNI	CTCAG	2 cut(s)	346, 1417
BspDI	ATCGAT	1 cut(s)	804
BspFNI	CGCG	3 cut(s)	608, 893, 1164
BspLI	GGNNCC	2 cut(s)	838, 1092
BspMI	ACCTGC	2 cut(s)	557, 696
BspPI	GGATC	4 cut(s)	171, 545, 831, 844
BspT107I	GGYRCC	1 cut(s)	1090
BspTNI	GGTCTC	2 cut(s)	529, 1188
BsrBI	CCGCTC	1 cut(s)	251
BsrDI	GCAATG	1 cut(s)	501
BsrI	ACTGG	1 cut(s)	925
BssECI	CCNNGG	2 cut(s)	159, 228
BssMI	GATC	4 cut(s)	163, 420, 537, 836
BssNI	GRCGYC	1 cut(s)	486
BssSI	CACGAG	1 cut(s)	246
BssT1I	CCWWGG	1 cut(s)	159
Bst2BI	CACGAG	1 cut(s)	246
Bst2UI	CCWGG	1 cut(s)	102
Bst4CI	ACNGT	6 cut(s)	191, 229, 922, 1132, 1290, 1339
Bst6I	CTCTTC	1 cut(s)	444
BstACI	GRCGYC	1 cut(s)	486
BstC8I	GCNNGC	6 cut(s)	36, 57, 61, 395, 816, 1467
BstDEI	CTNAG	3 cut(s)	354, 407, 1425
BstDSI	CCRYGG	2 cut(s)	159, 228
BstENI	CCTNNNNNAGG	1 cut(s)	306
BstF5I	GGATG	3 cut(s)	561, 952, 1081
BstFNI	CGCG	3 cut(s)	608, 893, 1164
BstH2I	RGCGCY	1 cut(s)	935
BstHHI	GCGC	1 cut(s)	934
BstKTI	GATC	4 cut(s)	166, 423, 540, 839
BstMAI	GTCTC	3 cut(s)	241, 529, 1188
BstMBI	GATC	4 cut(s)	163, 420, 537, 836
BstMCI	CGRYCG	1 cut(s)	255
BstMWI	GCNNNNNNNGC	3 cut(s)	688, 815, 899
BstNI	CCWGG	1 cut(s)	102
BstNSI	RCATGY	5 cut(s)	63, 382, 397, 889, 1402
BstSCI	CCNGG	1 cut(s)	100
BstUI	CGCG	3 cut(s)	608, 893, 1164
BstV1I	GCAGC	5 cut(s)	141, 650, 653, 1124, 1389
BstV2I	GAAGAC	1 cut(s)	1312
BstX2I	RGATCY	2 cut(s)	163, 836
BstYI	RGATCY	2 cut(s)	163, 836
BstZI	CGGCCG	1 cut(s)	252
Bsu15I	ATCGAT	1 cut(s)	804
BsuRI	GGCC	5 cut(s)	216, 254, 818, 1002, 1454
BsuTUI	ATCGAT	1 cut(s)	804
BtgI	CCRYGG	2 cut(s)	159, 228
BtsCI	GGATG	3 cut(s)	561, 952, 1081
BtsIMutI	CAGTG	2 cut(s)	932, 1128
BveI	ACCTGC	2 cut(s)	557, 696
Cac8I	GCNNGC	6 cut(s)	36, 57, 61, 395, 816, 1467
CfoI	GCGC	1 cut(s)	934
Cfr13I	GGNCC	4 cut(s)	104, 372, 817, 1452
ClaI	ATCGAT	1 cut(s)	804
CseI	GACGC	3 cut(s)	494, 507, 597
Csp6I	GTAC	6 cut(s)	202, 574, 1091, 1229, 1286, 1343
CviQI	GTAC	6 cut(s)	202, 574, 1091, 1229, 1286, 1343
DdeI	CTNAG	3 cut(s)	354, 407, 1425
DpnI	GATC	4 cut(s)	165, 422, 539, 838
DpnII	GATC	4 cut(s)	163, 420, 537, 836
DraIII	CACNNNGTG	1 cut(s)	1351
EaeI	YGGCCR	1 cut(s)	252
EagI	CGGCCG	1 cut(s)	252
Eam1104I	CTCTTC	1 cut(s)	444
EarI	CTCTTC	1 cut(s)	444
EclXI	CGGCCG	1 cut(s)	252
Eco130I	CCWWGG	1 cut(s)	159
Eco147I	AGGCCT	2 cut(s)	216, 1002
Eco24I	GRGCYC	1 cut(s)	699
Eco31I	GGTCTC	2 cut(s)	529, 1188
Eco47I	GGWCC	2 cut(s)	104, 372
Eco52I	CGGCCG	1 cut(s)	252
Eco57I	CTGAAG	3 cut(s)	852, 882, 1472
Eco88I	CYCGRG	2 cut(s)	533, 1198
EcoNI	CCTNNNNNAGG	1 cut(s)	306
EcoRII	CCWGG	1 cut(s)	100
EcoT14I	CCWWGG	1 cut(s)	159
EcoT22I	ATGCAT	1 cut(s)	65
EcoT38I	GRGCYC	1 cut(s)	699
ErhI	CCWWGG	1 cut(s)	159
Esp3I	CGTCTC	1 cut(s)	241
FauI	CCCGC	1 cut(s)	587
FblI	GTMKAC	2 cut(s)	295, 496
Fnu4HI	GCNGC	7 cut(s)	130, 252, 639, 642, 894, 1113, 1403
FokI	GGATG	3 cut(s)	568, 939, 1068
FriOI	GRGCYC	1 cut(s)	699
Fsp4HI	GCNGC	7 cut(s)	130, 252, 639, 642, 894, 1113, 1403
FspBI	CTAG	3 cut(s)	176, 635, 1439
GlaI	GCGC	1 cut(s)	933
GluI	GCNGC	7 cut(s)	130, 252, 639, 642, 894, 1113, 1403
GsuI	CTGGAG	1 cut(s)	203
HaeII	RGCGCY	1 cut(s)	935
HaeIII	GGCC	5 cut(s)	216, 254, 818, 1002, 1454
HapII	CCGG	1 cut(s)	553
HgaI	GACGC	3 cut(s)	494, 507, 597
HhaI	GCGC	1 cut(s)	934
Hin1I	GRCGYC	1 cut(s)	486
Hin6I	GCGC	1 cut(s)	932
HinP1I	GCGC	1 cut(s)	932
HincII	GTYRAC	3 cut(s)	21, 497, 721
HindII	GTYRAC	3 cut(s)	21, 497, 721
HindIII	AAGCTT	1 cut(s)	340
HinfI	GANTC	3 cut(s)	849, 1022, 1459
HpaI	GTTAAC	2 cut(s)	21, 721
HpaII	CCGG	1 cut(s)	553
HphI	GGTGA	1 cut(s)	203
Hpy166II	GTNNAC	6 cut(s)	21, 243, 296, 497, 721, 1345
Hpy188I	TCNGA	7 cut(s)	108, 832, 841, 883, 940, 1027, 1491
Hpy188III	TCNNGA	6 cut(s)	463, 479, 535, 946, 1189, 1391
Hpy8I	GTNNAC	6 cut(s)	21, 243, 296, 497, 721, 1345
Hpy99I	CGWCG	3 cut(s)	488, 501, 532
HpyAV	CCTTC	6 cut(s)	302, 706, 742, 827, 1057, 1496
HpyCH4III	ACNGT	6 cut(s)	191, 229, 922, 1132, 1290, 1339
HpyCH4IV	ACGT	1 cut(s)	1309
HpyF10VI	GCNNNNNNNGC	3 cut(s)	688, 815, 899
HpyF3I	CTNAG	3 cut(s)	354, 407, 1425
HpySE526I	ACGT	1 cut(s)	1309
Hsp92I	GRCGYC	1 cut(s)	486
HspAI	GCGC	1 cut(s)	932
KpnI	GGTACC	1 cut(s)	1094
KspAI	GTTAAC	2 cut(s)	21, 721
Kzo9I	GATC	4 cut(s)	163, 420, 537, 836
Lsp1109I	GCAGC	5 cut(s)	141, 650, 653, 1124, 1389
LweI	GCATC	5 cut(s)	57, 772, 796, 961, 1204
MaeI	CTAG	3 cut(s)	176, 635, 1439
MaeII	ACGT	1 cut(s)	1309
MaeIII	GTNAC	5 cut(s)	93, 191, 511, 1158, 1247
MalI	GATC	4 cut(s)	165, 422, 539, 838
MbiI	CCGCTC	1 cut(s)	251
MboI	GATC	4 cut(s)	163, 420, 537, 836
MboII	GAAGA	9 cut(s)	158, 461, 580, 758, 979, 1133, 1165, 1223, 1317
MfeI	CAATTG	1 cut(s)	24
MflI	RGATCY	2 cut(s)	163, 836
MhlI	GDGCHC	1 cut(s)	699
MluCI	AATT	5 cut(s)	24, 401, 737, 1037, 1492
MluI	ACGCGT	1 cut(s)	1162
MmeI	TCCRAC	4 cut(s)	861, 864, 1297, 1395
Mph1103I	ATGCAT	1 cut(s)	65
MseI	TTAA	3 cut(s)	20, 282, 720
MslI	CAYNNNNRTG	1 cut(s)	1058
MspA1I	CMGCKG	1 cut(s)	902
MspI	CCGG	1 cut(s)	553
MspR9I	CCNGG	1 cut(s)	102
MunI	CAATTG	1 cut(s)	24
Mva1269I	GAATGC	1 cut(s)	1326
MvaI	CCWGG	1 cut(s)	102
MvnI	CGCG	3 cut(s)	608, 893, 1164
MwoI	GCNNNNNNNGC	3 cut(s)	688, 815, 899
NcoI	CCATGG	1 cut(s)	159
NdeII	GATC	4 cut(s)	163, 420, 537, 836
NlaIV	GGNNCC	2 cut(s)	838, 1092
NmeAIII	GCCGAG	1 cut(s)	280
NmuCI	GTSAC	3 cut(s)	191, 511, 1158
NsiI	ATGCAT	1 cut(s)	65
NspI	RCATGY	5 cut(s)	63, 382, 397, 889, 1402
PaeI	GCATGC	2 cut(s)	63, 397
PceI	AGGCCT	2 cut(s)	216, 1002
PciI	ACATGT	1 cut(s)	885
PctI	GAATGC	1 cut(s)	1326
PfeI	GAWTC	3 cut(s)	849, 1022, 1459
PflFI	GACNNNGTC	1 cut(s)	521
PkrI	GCNGC	7 cut(s)	131, 253, 640, 643, 895, 1114, 1404
PscI	ACATGT	1 cut(s)	885
Psp6I	CCWGG	1 cut(s)	100
PspGI	CCWGG	1 cut(s)	100
PspN4I	GGNNCC	2 cut(s)	838, 1092
PspPI	GGNCC	4 cut(s)	104, 372, 817, 1452
PsuI	RGATCY	2 cut(s)	163, 836
PsyI	GACNNNGTC	1 cut(s)	521
RsaI	GTAC	6 cut(s)	203, 575, 1092, 1230, 1287, 1344
RsaNI	GTAC	6 cut(s)	202, 574, 1091, 1229, 1286, 1343
RseI	CAYNNNNRTG	1 cut(s)	1058
SalI	GTCGAC	1 cut(s)	495
SaqAI	TTAA	3 cut(s)	20, 282, 720
SatI	GCNGC	7 cut(s)	130, 252, 639, 642, 894, 1113, 1403
Sau3AI	GATC	4 cut(s)	163, 420, 537, 836
Sau96I	GGNCC	4 cut(s)	104, 372, 817, 1452
ScrFI	CCNGG	1 cut(s)	102
SduI	GDGCHC	1 cut(s)	699
SfaNI	GCATC	5 cut(s)	57, 772, 796, 961, 1204
SinI	GGWCC	2 cut(s)	104, 372
SmiMI	CAYNNNNRTG	1 cut(s)	1058
SmlI	CTYRAG	3 cut(s)	205, 343, 946
SmoI	CTYRAG	3 cut(s)	205, 343, 946
SphI	GCATGC	2 cut(s)	63, 397
Sse9I	AATT	5 cut(s)	24, 401, 737, 1037, 1492
SseBI	AGGCCT	2 cut(s)	216, 1002
SsiI	CCGC	5 cut(s)	251, 594, 680, 893, 902
SspMI	CTAG	3 cut(s)	176, 635, 1439
StuI	AGGCCT	2 cut(s)	216, 1002
StyD4I	CCNGG	1 cut(s)	100
StyI	CCWWGG	1 cut(s)	159
TaaI	ACNGT	6 cut(s)	191, 229, 922, 1132, 1290, 1339
TaiI	ACGT	1 cut(s)	1312
TaqI	TCGA	6 cut(s)	399, 496, 804, 852, 1119, 1134
TasI	AATT	5 cut(s)	24, 401, 737, 1037, 1492
TatI	WGTACW	2 cut(s)	201, 573
TauI	GCSGC	2 cut(s)	254, 896
TfiI	GAWTC	3 cut(s)	849, 1022, 1459
Tru1I	TTAA	3 cut(s)	20, 282, 720
Tru9I	TTAA	3 cut(s)	20, 282, 720
TscAI	CASTG	2 cut(s)	932, 1135
TseFI	GTSAC	3 cut(s)	191, 511, 1158
TseI	GCWGC	5 cut(s)	129, 638, 641, 1112, 1402
Tsp45I	GTSAC	3 cut(s)	191, 511, 1158
TspDTI	ATGAA	9 cut(s)	158, 321, 632, 644, 652, 725, 750, 790, 980
TspRI	CASTG	2 cut(s)	932, 1135
Tth111I	GACNNNGTC	1 cut(s)	521
VpaK11BI	GGWCC	2 cut(s)	104, 372
XagI	CCTNNNNNAGG	1 cut(s)	306
XapI	RAATTY	1 cut(s)	737
XceI	RCATGY	5 cut(s)	63, 382, 397, 889, 1402
XmiI	GTMKAC	2 cut(s)	295, 496
XspI	CTAG	3 cut(s)	176, 635, 1439
Zsp2I	ATGCAT	1 cut(s)	65

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.