Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0000398

Physical Location & Seq

Genomic Coordinates Forward (+)

32096236 .. 32098133

Gene Structure 1898 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1219700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGGCACTTTGGATTTGGGCAACACTTGGGGTGCTTGCACTTGTTCACATCCTGCAAACATGCATATCAAAAGGCAAGACCAAGCACAAGATGCTACCTCCTGGTCCGAGAGGGTTTCCTATTTTTGGCAGCCTCCATTTGTTAGGAAAGTTCCCTAACAGGGATCTTCATCAACTATCCCGGAAATACGGTGATATCATGTACTTGCGGTTAGGCCTCGTACCCACAGTTGTTGTCTCGTCCCCACGAGCGGCCGAGCTGTTCCTCAAAACGCATGACCTCGTTTTTGCAAGTCGACCACCTCATGAAGGTTCAAAGCACATTTCGTTTGGGCAAAGGAACCTGAGCTTTGCTGAGTATGGCTCGTATTGGCGCGACATCCGAAAGATGTGCACGCTCGAATTACTTAGCAACCACAAAATCAATTCTTTCAAGTCGATGAGGAGAGAAGAAGTTGCTCTCCTAATTCAGTCTGTTGAGGAGGATGCCAATTATGGACGCGTTGCTATTGATCTCAGTGTCAAGGTATCATCGCTGAGCGTTGACATGACCTGCCGGATGGTGTTTGGGAAGAAGTACAAGGACGAGGAGTTTGACGAGAGGGGTTTCACCGCTGTGATGAAAGAGGGTCTCAAATTATCAGCGGGCCCTAACTTGGGAGATTACATTCCTTGTATTGCGCCGCTTGACCTCCAAGGGTTCACTAAAAAAATGAAAGCTATTAACAAGGCGTTTGATGAATTTTTTGAGAAGATTATTGATGAACATCTTCAATCCAAGGATGAAGAAAGAACTAAGGACTTTGTTGATGTCATGGTGGCCTTCATGGGGTCTGAAGATTCTGACTACCGAATCGAACGCACCAATATCAAAGCCATAATGTTGGACATGTTTGCGGGTTCAATGGACACCACATCAACAACAGTCGAGTGGGCACTCTCGGAACTCATGAGACATCCACAGGTTATGAAGAAAGTCCAAAAAGAGCTAGAAAATGTTGTCGGCCTCAATAGAATGGTGGAGGAATCAGACTTGGAGAAATTGGAGTACTTGGACATGGTAGTCAAGGAAACCTTGAGGCTACATCCAGTGGCACCATTGTTGGTTCCTCATGCAGCCATTGAAGATTGCATTGTCGATGGCTACCATGTACCAAAAAAGTCACTCGTGATCATAAACGCATGGGCAATCGGGAGAGACCAGAGTGCTTGGGAAGATGCAGAGAAGTTCGTACCAGAGAGGTTTGAGGGTAATAATGTTGATGTTAGAGGAAACCACTTTCAGCTTATACCGTTCGGATCCGGCAGAAGGCGTTGCCCTGGAATTCAGTTAGGGCTTACTGTGGTACAATTTGTGTTGGCACAACTTGTGCATTGTTTTGATTGGGAACTTCCGGATAACATGTTGCCAAATGACTTGGATATGACTGAGGATTTTGGTCTTACAGTCTCAAGGGCCAAGCATTTGCTCGCTATTCCTTCATATCGCCTTCAGAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0008150 GO:0008152 GO:0009058 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0012505 GO:0016020 GO:0019748 GO:0031090 GO:0031984 GO:0042175 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0050896 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

500

Amino Acids

56.77

Weight (kDa)

6.37

Isoelectric Point (pI)

37.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	33 - 488	1.9e-108	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000398)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g21960 FvH4_3g24140 FvH4_3g24150 FvH4_7g09230 FvH4_7g09260
malus_domestica	MD00G1169700.v1.1 MD00G1169800.v1.1 MD01G1016400.v1.1 MD03G1188000.v1.1 MD03G1188100.v1.1 MD11G1219700.v1.1 MD11G1219900.v1.1 MD11G1220200.v1.1 MD11G1220400.v1.1 MD11G1220600.v1.1
prunus_persica	Prupe.2G006500_v2.0.a1 Prupe.4G235500_v2.0.a1 Prupe.4G235600_v2.0.a1 Prupe.4G235700_v2.0.a1 Prupe.4G235700_v2.0.a1 Prupe.4G235800_v2.0.a1 Prupe.4G235900_v2.0.a1 Prupe.6G176500_v2.0.a1
pyrus_communis	pycom01g04750 pycom03g14060 pycom11g19360 pycom11g19370 pycom11g19380 pycom11g19390 pycom11g19400 pycom11g19460
rosa_chinensis	RchiOBHm_Chr1g0345321 RchiOBHm_Chr1g0345511 RchiOBHm_Chr1g0345781 RchiOBHm_Chr2g0115981 RchiOBHm_Chr5g0043151 RchiOBHm_Chr5g0043161 RchiOBHm_Chr5g0043901 RchiOBHm_Chr6g0274841
rosa_laevigata	RLG00000013516 RLG00000018229 RLG00000028840 RLG00000028923 RLG00000034169 RLG00000034223
rosa_multiflora	Rmu_co8474237.1_g000001 Rmu_sc0000698.1_g000004 Rmu_sc0000698.1_g000021 Rmu_sc0000698.1_g000023 Rmu_sc0000698.1_g000056 Rmu_sc0000698.1_g000057 Rmu_sc0000698.1_g000122 Rmu_sc0000698.1_g000123 Rmu_sc0000698.1_g000124 Rmu_sc0001292.1_g000005 Rmu_sc0001292.1_g000006 Rmu_sc0001349.1_g000002 Rmu_sc0001692.1_g000035 Rmu_sc0002079.1_g000035 Rmu_sc0002079.1_g000045 Rmu_sc0002329.1_g000017 Rmu_sc0008148.1_g000056 Rmu_sc0008148.1_g000057 Rmu_sc0008148.1_g000058 Rmu_sc0008148.1_g000062 Rmu_sc0008611.1_g000010 Rmu_sc0009227.1_g000007
rosa_roxburghii	Rroxscaffold_1G00011260 Rroxscaffold_1G00037590 Rroxscaffold_2G00127610 Rroxscaffold_4G00309120 Rroxscaffold_7G00193880
rosa_rugosa	Rorug01G0177400 Rorug02G0202400 Rorug05G0204600 Rorug05G0209000 Rorug06G0085100 Rorug06G0085200
rosa_samantha	Rh1BG154400 Rh1DG186600 Rh2CG265200 Rh2DG267000 Rh5AG289700 Rh5AG289800 Rh5AG290000 Rh5AG293200 Rh5CG326500 Rh5DG305700 Rh5DG305800 Rh5DG310100 Rh6BG204200 Rh6CG204500 Rh6DG195700
rosa_wichuraiana	Rw1G016100 Rw1G016470 Rw2G020290 Rw5G026830 Rw5G026910 Rw5G026920 Rw5G026930 Rw6G017460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1061
Acc36I	ACCTGC	1 cut(s)	560
AccB1I	GGYRCC	1 cut(s)	1093
AccBSI	CCGCTC	1 cut(s)	251
AccI	GTMKAC	1 cut(s)	295
AccII	CGCG	2 cut(s)	375, 501
AccIII	TCCGGA	1 cut(s)	1393
AciI	CCGC	6 cut(s)	208, 251, 612, 644, 683, 896
AclWI	GGATC	3 cut(s)	171, 1293, 1306
AcoI	YGGCCR	1 cut(s)	252
AcsI	RAATTY	2 cut(s)	740, 1323
AcuI	CTGAAG	2 cut(s)	855, 1475
AfaI	GTAC	7 cut(s)	203, 222, 578, 1049, 1152, 1233, 1347
AfiI	CCNNNNNNNGG	8 cut(s)	125, 160, 250, 308, 655, 656, 828, 1308
AflIII	ACRYGT	3 cut(s)	499, 888, 1401
AgsI	TTSAA	5 cut(s)	315, 433, 773, 903, 1124
AjnI	CCWGG	2 cut(s)	100, 1318
AleI	CACNNNNGTG	1 cut(s)	614
AluBI	AGCT	5 cut(s)	259, 348, 719, 988, 1285
AluI	AGCT	5 cut(s)	259, 348, 719, 988, 1285
Alw21I	GWGCWC	1 cut(s)	395
Alw26I	GTCTC	5 cut(s)	241, 635, 946, 1191, 1453
Alw44I	GTGCAC	1 cut(s)	391
AlwI	GGATC	3 cut(s)	171, 1293, 1306
Aor13HI	TCCGGA	1 cut(s)	1393
AoxI	GGCC	6 cut(s)	214, 252, 646, 819, 1003, 1455
ApaI	GGGCCC	1 cut(s)	650
ApaLI	GTGCAC	1 cut(s)	391
ApeKI	GCWGC	2 cut(s)	129, 1115
ApoI	RAATTY	2 cut(s)	740, 1323
ArsI	GACNNNNNNTTYG	4 cut(s)	269, 301, 575, 607
Asp700I	GAANNNNTTC	1 cut(s)	768
AspLEI	GCGC	2 cut(s)	375, 682
AspS9I	GGNCC	4 cut(s)	104, 646, 647, 1455
AsuC2I	CCSGG	1 cut(s)	181
AsuHPI	GGTGA	2 cut(s)	203, 601
AvaII	GGWCC	1 cut(s)	104
BaeGI	GKGCMC	3 cut(s)	395, 650, 937
BamHI	GGATCC	1 cut(s)	1298
BanI	GGYRCC	1 cut(s)	1093
BanII	GRGCYC	1 cut(s)	650
BauI	CACGAG	2 cut(s)	246, 1166
Bbv12I	GWGCWC	1 cut(s)	395
BbvI	GCAGC	2 cut(s)	141, 1127
BccI	CCATC	2 cut(s)	553, 1133
BcgI	CGANNNNNNTGC	2 cut(s)	372, 406
BciT130I	CCWGG	2 cut(s)	102, 1320
BclI	TGATCA	1 cut(s)	1170
BcnI	CCSGG	1 cut(s)	181
BcoDI	GTCTC	5 cut(s)	241, 635, 946, 1191, 1453
BfaI	CTAG	1 cut(s)	989
BfuAI	ACCTGC	1 cut(s)	560
BisI	GCNGC	4 cut(s)	130, 252, 683, 1116
BlpI	GCTNAGC	1 cut(s)	536
BlsI	GCNGC	4 cut(s)	131, 253, 684, 1117
BmcAI	AGTACT	1 cut(s)	1049
Bme1390I	CCNGG	3 cut(s)	102, 181, 1320
Bme18I	GGWCC	1 cut(s)	104
BmgT120I	GGNCC	4 cut(s)	104, 646, 647, 1455
BmiI	GGNNCC	5 cut(s)	341, 648, 1095, 1107, 1300
BmrFI	CCNGG	3 cut(s)	102, 181, 1320
BmsI	GCATC	3 cut(s)	81, 475, 1207
BplI	GAGNNNNNCTC	2 cut(s)	347, 379
Bpu10I	CCTNAGC	1 cut(s)	344
Bpu1102I	GCTNAGC	1 cut(s)	536
BpuEI	CTTGAG	2 cut(s)	1096, 1435
BpuMI	CCSGG	1 cut(s)	181
BsaBI	GATNNNNATC	2 cut(s)	168, 765
BsaI	GGTCTC	2 cut(s)	635, 1191
BsaJI	CCNNGG	3 cut(s)	694, 777, 1318
BsaWI	WCCGGW	1 cut(s)	1393
Bsc4I	CCNNNNNNNGG	8 cut(s)	125, 160, 250, 308, 655, 656, 828, 1308
Bse1I	ACTGG	1 cut(s)	1088
Bse8I	GATNNNNATC	2 cut(s)	168, 765
BseAI	TCCGGA	1 cut(s)	1393
BseBI	CCWGG	2 cut(s)	102, 1320
BseDI	CCNNGG	3 cut(s)	694, 777, 1318
BseGI	GGATG	7 cut(s)	48, 378, 490, 564, 787, 955, 1084
BseJI	GATNNNNATC	2 cut(s)	168, 765
BseLI	CCNNNNNNNGG	8 cut(s)	125, 160, 250, 308, 655, 656, 828, 1308
BseMII	CTCAG	5 cut(s)	335, 345, 527, 529, 1419
BseNI	ACTGG	1 cut(s)	1088
BseRI	GAGGAG	3 cut(s)	457, 494, 602
BseSI	GKGCMC	3 cut(s)	395, 650, 937
BseX3I	CGGCCG	1 cut(s)	252
BseXI	GCAGC	2 cut(s)	141, 1127
Bsh1236I	CGCG	2 cut(s)	375, 501
Bsh1285I	CGRYCG	1 cut(s)	255
BshFI	GGCC	6 cut(s)	216, 254, 648, 821, 1005, 1457
BshNI	GGYRCC	1 cut(s)	1093
BsiEI	CGRYCG	1 cut(s)	255
BsiHKAI	GWGCWC	1 cut(s)	395
BsiSI	CCGG	4 cut(s)	181, 556, 1302, 1394
BslFI	GGGAC	1 cut(s)	226
BslI	CCNNNNNNNGG	8 cut(s)	125, 160, 250, 308, 655, 656, 828, 1308
BsmAI	GTCTC	5 cut(s)	241, 635, 946, 1191, 1453
BsmFI	GGGAC	1 cut(s)	226
BsnI	GGCC	6 cut(s)	216, 254, 648, 821, 1005, 1457
Bso31I	GGTCTC	2 cut(s)	635, 1191
Bsp120I	GGGCCC	1 cut(s)	646
Bsp1286I	GDGCHC	3 cut(s)	395, 650, 937
Bsp13I	TCCGGA	1 cut(s)	1393
Bsp143I	GATC	4 cut(s)	163, 511, 1170, 1298
Bsp1720I	GCTNAGC	1 cut(s)	536
BspACI	CCGC	6 cut(s)	208, 251, 612, 644, 683, 896
BspANI	GGCC	6 cut(s)	216, 254, 648, 821, 1005, 1457
BspCNI	CTCAG	5 cut(s)	336, 346, 528, 528, 1420
BspEI	TCCGGA	1 cut(s)	1393
BspFNI	CGCG	2 cut(s)	375, 501
BspHI	TCATGA	2 cut(s)	304, 948
BspLI	GGNNCC	5 cut(s)	341, 648, 1095, 1107, 1300
BspMI	ACCTGC	1 cut(s)	560
BspPI	GGATC	3 cut(s)	171, 1293, 1306
BspT107I	GGYRCC	1 cut(s)	1093
BspTNI	GGTCTC	2 cut(s)	635, 1191
BsrBI	CCGCTC	1 cut(s)	251
BsrI	ACTGG	1 cut(s)	1088
BssECI	CCNNGG	3 cut(s)	694, 777, 1318
BssMI	GATC	4 cut(s)	163, 511, 1170, 1298
BssSI	CACGAG	2 cut(s)	246, 1166
BssT1I	CCWWGG	2 cut(s)	694, 777
Bst2BI	CACGAG	2 cut(s)	246, 1166
Bst2UI	CCWGG	2 cut(s)	102, 1320
Bst4CI	ACNGT	6 cut(s)	191, 229, 925, 1293, 1342, 1447
BstAPI	GCANNNNNTGC	1 cut(s)	91
BstC8I	GCNNGC	4 cut(s)	36, 395, 646, 1470
BstDEI	CTNAG	7 cut(s)	344, 354, 407, 515, 536, 795, 1428
BstENI	CCTNNNNNAGG	1 cut(s)	306
BstF5I	GGATG	7 cut(s)	48, 378, 490, 564, 787, 955, 1084
BstFNI	CGCG	2 cut(s)	375, 501
BstHHI	GCGC	2 cut(s)	375, 682
BstKTI	GATC	4 cut(s)	166, 514, 1173, 1301
BstMAI	GTCTC	5 cut(s)	241, 635, 946, 1191, 1453
BstMBI	GATC	4 cut(s)	163, 511, 1170, 1298
BstMCI	CGRYCG	1 cut(s)	255
BstMWI	GCNNNNNNNGC	1 cut(s)	91
BstNI	CCWGG	2 cut(s)	102, 1320
BstNSI	RCATGY	3 cut(s)	63, 892, 1405
BstSCI	CCNGG	3 cut(s)	100, 179, 1318
BstSLI	GKGCMC	3 cut(s)	395, 650, 937
BstUI	CGCG	2 cut(s)	375, 501
BstV1I	GCAGC	2 cut(s)	141, 1127
BstX2I	RGATCY	2 cut(s)	163, 1298
BstXI	CCANNNNNNTGG	1 cut(s)	883
BstYI	RGATCY	2 cut(s)	163, 1298
BstZI	CGGCCG	1 cut(s)	252
BsuRI	GGCC	6 cut(s)	216, 254, 648, 821, 1005, 1457
BtgZI	GCGATG	1 cut(s)	516
BtsCI	GGATG	7 cut(s)	48, 378, 490, 564, 787, 955, 1084
BtsIMutI	CAGTG	2 cut(s)	523, 1095
BveI	ACCTGC	1 cut(s)	560
Cac8I	GCNNGC	4 cut(s)	36, 395, 646, 1470
CciI	TCATGA	2 cut(s)	304, 948
CfoI	GCGC	2 cut(s)	375, 682
Cfr13I	GGNCC	4 cut(s)	104, 646, 647, 1455
CseI	GACGC	1 cut(s)	507
Csp6I	GTAC	7 cut(s)	202, 221, 577, 1048, 1151, 1232, 1346
CspCI	CAANNNNNGTGG	2 cut(s)	214, 249
CviQI	GTAC	7 cut(s)	202, 221, 577, 1048, 1151, 1232, 1346
DdeI	CTNAG	7 cut(s)	344, 354, 407, 515, 536, 795, 1428
DpnI	GATC	4 cut(s)	165, 513, 1172, 1300
DpnII	GATC	4 cut(s)	163, 511, 1170, 1298
DrdI	GACNNNNNNGTC	1 cut(s)	1061
DseDI	GACNNNNNNGTC	1 cut(s)	1061
EaeI	YGGCCR	1 cut(s)	252
EagI	CGGCCG	1 cut(s)	252
EclXI	CGGCCG	1 cut(s)	252
Eco130I	CCWWGG	2 cut(s)	694, 777
Eco147I	AGGCCT	1 cut(s)	216
Eco24I	GRGCYC	1 cut(s)	650
Eco31I	GGTCTC	2 cut(s)	635, 1191
Eco32I	GATATC	1 cut(s)	196
Eco47I	GGWCC	1 cut(s)	104
Eco52I	CGGCCG	1 cut(s)	252
Eco57I	CTGAAG	2 cut(s)	855, 1475
EcoNI	CCTNNNNNAGG	1 cut(s)	306
EcoO109I	RGGNCCY	1 cut(s)	647
EcoRI	GAATTC	1 cut(s)	1323
EcoRII	CCWGG	2 cut(s)	100, 1318
EcoRV	GATATC	1 cut(s)	196
EcoT14I	CCWWGG	2 cut(s)	694, 777
EcoT22I	ATGCAT	1 cut(s)	65
EcoT38I	GRGCYC	1 cut(s)	650
ErhI	CCWWGG	2 cut(s)	694, 777
FalI	AAGNNNNNCTT	2 cut(s)	1058, 1090
FaqI	GGGAC	1 cut(s)	226
FauI	CCCGC	2 cut(s)	637, 889
FbaI	TGATCA	1 cut(s)	1170
FblI	GTMKAC	1 cut(s)	295
Fnu4HI	GCNGC	4 cut(s)	130, 252, 683, 1116
FokI	GGATG	7 cut(s)	35, 365, 497, 571, 794, 942, 1071
FriOI	GRGCYC	1 cut(s)	650
Fsp4HI	GCNGC	4 cut(s)	130, 252, 683, 1116
FspBI	CTAG	1 cut(s)	989
GlaI	GCGC	2 cut(s)	374, 681
GluI	GCNGC	4 cut(s)	130, 252, 683, 1116
HaeIII	GGCC	6 cut(s)	216, 254, 648, 821, 1005, 1457
HapII	CCGG	4 cut(s)	181, 556, 1302, 1394
HgaI	GACGC	1 cut(s)	507
HhaI	GCGC	2 cut(s)	375, 682
Hin6I	GCGC	2 cut(s)	373, 680
HinP1I	GCGC	2 cut(s)	373, 680
HincII	GTYRAC	2 cut(s)	296, 544
HindII	GTYRAC	2 cut(s)	296, 544
HinfI	GANTC	3 cut(s)	839, 852, 1025
HpaII	CCGG	4 cut(s)	181, 556, 1302, 1394
HphI	GGTGA	2 cut(s)	203, 601
Hpy166II	GTNNAC	5 cut(s)	46, 296, 393, 544, 702
Hpy188I	TCNGA	8 cut(s)	108, 383, 835, 844, 943, 1030, 1298, 1494
Hpy188III	TCNNGA	5 cut(s)	305, 949, 1168, 1192, 1394
Hpy8I	GTNNAC	5 cut(s)	46, 296, 393, 544, 702
HpyAV	CCTTC	5 cut(s)	302, 832, 1302, 1488, 1499
HpyCH4III	ACNGT	6 cut(s)	191, 229, 925, 1293, 1342, 1447
HpyCH4V	TGCA	9 cut(s)	38, 55, 63, 290, 393, 1115, 1131, 1220, 1372
HpyF10VI	GCNNNNNNNGC	1 cut(s)	91
HpyF3I	CTNAG	7 cut(s)	344, 354, 407, 515, 536, 795, 1428
HspAI	GCGC	2 cut(s)	373, 680
Kpn2I	TCCGGA	1 cut(s)	1393
Ksp22I	TGATCA	1 cut(s)	1170
Kzo9I	GATC	4 cut(s)	163, 511, 1170, 1298
Lsp1109I	GCAGC	2 cut(s)	141, 1127
LweI	GCATC	3 cut(s)	81, 475, 1207
MaeI	CTAG	1 cut(s)	989
MaeIII	GTNAC	1 cut(s)	1161
MalI	GATC	4 cut(s)	165, 513, 1172, 1300
MbiI	CCGCTC	1 cut(s)	251
MboI	GATC	4 cut(s)	163, 511, 1170, 1298
MflI	RGATCY	2 cut(s)	163, 1298
MhlI	GDGCHC	3 cut(s)	395, 650, 937
MluI	ACGCGT	1 cut(s)	499
MmeI	TCCRAC	1 cut(s)	864
Mph1103I	ATGCAT	1 cut(s)	65
MroI	TCCGGA	1 cut(s)	1393
MroXI	GAANNNNTTC	1 cut(s)	768
MseI	TTAA	2 cut(s)	723, 1498
MslI	CAYNNNNRTG	1 cut(s)	614
MspA1I	CMGCKG	2 cut(s)	614, 644
MspI	CCGG	4 cut(s)	181, 556, 1302, 1394
MspR9I	CCNGG	3 cut(s)	102, 181, 1320
MvaI	CCWGG	2 cut(s)	102, 1320
MvnI	CGCG	2 cut(s)	375, 501
MwoI	GCNNNNNNNGC	1 cut(s)	91
NciI	CCSGG	1 cut(s)	181
NdeII	GATC	4 cut(s)	163, 511, 1170, 1298
NlaIV	GGNNCC	5 cut(s)	341, 648, 1095, 1107, 1300
NmeAIII	GCCGAG	1 cut(s)	280
NmuCI	GTSAC	1 cut(s)	1161
NsiI	ATGCAT	1 cut(s)	65
NspI	RCATGY	3 cut(s)	63, 892, 1405
OliI	CACNNNNGTG	1 cut(s)	614
PagI	TCATGA	2 cut(s)	304, 948
PceI	AGGCCT	1 cut(s)	216
PciI	ACATGT	2 cut(s)	888, 1401
PdmI	GAANNNNTTC	1 cut(s)	768
PfeI	GAWTC	3 cut(s)	839, 852, 1025
PfoI	TCCNGGA	1 cut(s)	179
PkrI	GCNGC	4 cut(s)	131, 253, 684, 1117
PscI	ACATGT	2 cut(s)	888, 1401
Psp6I	CCWGG	2 cut(s)	100, 1318
PspGI	CCWGG	2 cut(s)	100, 1318
PspN4I	GGNNCC	5 cut(s)	341, 648, 1095, 1107, 1300
PspOMI	GGGCCC	1 cut(s)	646
PspPI	GGNCC	4 cut(s)	104, 646, 647, 1455
PsuI	RGATCY	2 cut(s)	163, 1298
RsaI	GTAC	7 cut(s)	203, 222, 578, 1049, 1152, 1233, 1347
RsaNI	GTAC	7 cut(s)	202, 221, 577, 1048, 1151, 1232, 1346
RseI	CAYNNNNRTG	1 cut(s)	614
SalI	GTCGAC	1 cut(s)	294
SaqAI	TTAA	2 cut(s)	723, 1498
SatI	GCNGC	4 cut(s)	130, 252, 683, 1116
Sau3AI	GATC	4 cut(s)	163, 511, 1170, 1298
Sau96I	GGNCC	4 cut(s)	104, 646, 647, 1455
ScaI	AGTACT	1 cut(s)	1049
ScrFI	CCNGG	3 cut(s)	102, 181, 1320
SduI	GDGCHC	3 cut(s)	395, 650, 937
SfaNI	GCATC	3 cut(s)	81, 475, 1207
SinI	GGWCC	1 cut(s)	104
SmiMI	CAYNNNNRTG	1 cut(s)	614
SmlI	CTYRAG	2 cut(s)	1075, 1450
SmoI	CTYRAG	2 cut(s)	1075, 1450
SseBI	AGGCCT	1 cut(s)	216
SsiI	CCGC	6 cut(s)	208, 251, 612, 644, 683, 896
SspMI	CTAG	1 cut(s)	989
StuI	AGGCCT	1 cut(s)	216
StyD4I	CCNGG	3 cut(s)	100, 179, 1318
StyI	CCWWGG	2 cut(s)	694, 777
TaaI	ACNGT	6 cut(s)	191, 229, 925, 1293, 1342, 1447
TaqI	TCGA	6 cut(s)	295, 399, 437, 855, 927, 1137
TatI	WGTACW	3 cut(s)	201, 576, 1047
TauI	GCSGC	2 cut(s)	254, 685
TfiI	GAWTC	3 cut(s)	839, 852, 1025
Tru1I	TTAA	2 cut(s)	723, 1498
Tru9I	TTAA	2 cut(s)	723, 1498
TscAI	CASTG	2 cut(s)	523, 1095
TseFI	GTSAC	1 cut(s)	1161
TseI	GCWGC	2 cut(s)	129, 1115
Tsp45I	GTSAC	1 cut(s)	1161
TspRI	CASTG	2 cut(s)	523, 1095
VneI	GTGCAC	1 cut(s)	391
VpaK11BI	GGWCC	1 cut(s)	104
XagI	CCTNNNNNAGG	1 cut(s)	306
XapI	RAATTY	2 cut(s)	740, 1323
XceI	RCATGY	3 cut(s)	63, 892, 1405
XmiI	GTMKAC	1 cut(s)	295
XmnI	GAANNNNTTC	1 cut(s)	768
XspI	CTAG	1 cut(s)	989
ZrmI	AGTACT	1 cut(s)	1049
Zsp2I	ATGCAT	1 cut(s)	65

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.