Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0001220

Physical Location & Seq

Genomic Coordinates Forward (+)

34168163 .. 34172955

Gene Structure 4793 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1207100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGTCGAAGCTCATCCTCCTCCACACTTCCTACCACCTCACCCCAATCCACCGCCGCGCCTGCAACGCCGTCGTTTCGCCCTCTCTCTTCACTCCCTCCTCCCTCCGCTCCCAATGCCTCCGCCTCCAGTCCATCTCTCCCTCTCCCCCTCTTTCTCTGCGGAGCATTTCGGCTCGCGCCTTCGACTCGTCGTCGCCGGAGACCAAGGAAGAAGAATCGAAGGAGAGCGATGGCGATGTTGTGATTAAAACCACAACATCAGACACCAAGGAATATCCGAGCGGCGAGTTTCAGTTCGAGAAGGCGAGCGCGTGGAAGAGCTTCGTCGTCAAGCTCCGCATGCTCATTGCCTTCCCTTGGCAGCGCGTCAAGAAAGGCAGCGTCTTGACCATCAAATTGCGCGGCCAGGTGTCTGATCAGCTGAAGAGTCGATTTTCCAGTGGACTTTCGCTGCCTCAAATTTGTGAGAATTTGATGAAAGCAGCGTACGATCCTCGAATTCCCGGTGTCTATCTGCAAATTGAAAGTTTGAATTGTGGTTGGGGCAAAGTCGAAGAAATCCGAAGACATATCTTGGATTTCAAGAAATCAGGTAAATTTGTTGTGGCCTATGTTCCCGCTTGCGGAGAGAAAGAGTATTACCTTGCTAGTGCGTGCCAAGAGATATATGCACCTCCAAGTGCTTACTTTTCTTTGTTTGGGCTCACCGTTCAGTCCTCGTTCATAAGAGGTGTTCTTGAGAAAGTTGGAATCGAGCCACAAGTGGAAAGGATTGGTAAATACAAAAGTGCCGGTGATCAACTTGCGCGCACAACCATGTCCGAAGAGAATTGTGAGATGCTGACAGCATTGCTTGATAATATATATGGGAATTGGCTGGATGTGATTTCTTCCACAAGAGGAAAGAAAAGAGAAGATATCGAGAATTTCATTAATGAAGGAGTCTACCAAGTAGAAAAATTGAAAGAAGAAGGCTGGATCACAAACATACAATATGATGACGAGGTTATTTCAATGCTGAAGGAAAGACTTGGAGTACAAAAAGAAAAAACTCTTCCTATGGTTGATTACAGGAAATACTCAAAGGTTCGGCAATGGACTGTTGGATTATCAGGCGGTAAAGACAAGATAGCCATAATTAGAGCATCAGGTAGCATTAGTCGTGTACAAGGCGGTTTAAGTCTTCCTGGTTCTAGTATTATTGGGGAACAGTTCATTGAGAAGATACGTACTGTGAGAGAATCAAAAAGATATAAGGCCGCTATTATTCGAATTGACAGCCCTGGAGGTGATGCCCTTGCTTCTGATTTGATGTGGAGGGAAATCAGACTTTTGGCTGCATCAAAACCTGTCATTGCATCAATGTCTGATGTGGCAGCAAGTGGAGGATACTACATGGCAATGGCAGCAGACGCCATTGTTGCAGAAAATCTAACCTTAACGGGTTCCATTGGAGTTGTGACAGGGAAGTTTAACCTGGGAAAACTGTATGAGAAGATTGGCTTCAACAAAGAAATTATATCAAGGGGAAAATATGCTGAAGTTCTTGCAGCTGAACAACGATCCTTCAGACCAGAAGAAGCAGAAATCTTTGCTAAGTCTGCACAGAATGCATATAAGCAATTTCGAGACAAGGCAGCTCTTTCCAGATCGATGACTGTAGATAAAATGGAGGAGGTTGCACAAGGGAGAGTTTGGACCGGTAACGATGCAGCTTCACGGGGTTTAGTTGATGCTATTGGCGGACTTTCTCGCGCTGTTGCAATAGCAAAGCTCAAGGCAAATATACCCCAAGACAAACAGGTTGCACTCGTGGAGCTCGCAAGACCCTCCCCGACACTGCCAGAAATTTTAAGTGGCATAGGAGCTAGTTTGGTTGGAGTGGATAGAGCAATGAAGGAAGTGCTGCAGGAGTTGACGTTTTCCGGCGGAGTCCAAGCCCGGATGGAGGGAATCATGTTTCAGAGACTGGAGGGAGCTTCTCAGGCCAACCCCATCTTCTCTTTGTTCAAAGATTACTTTGGCTCCCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_S49

Protein Analysis

678

Amino Acids

74.76

Weight (kDa)

9.15

Isoelectric Point (pI)

48.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_S49	PF01343	194 - 346	7.9e-23	Peptidase family S49
Peptidase_S49	PF01343	445 - 595	1.9e-42	Peptidase family S49

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001220)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73990 AT1G73990
fragaria_vesca	FvH4_5g13110 FvH4_5g13112
malus_domestica	MD06G1207100.v1.1 MD14G1217600.v1.1
prunus_persica	Prupe.5G211500_v2.0.a1 Prupe.5G211500_v2.0.a1
pyrus_communis	pycom06g18500 pycom14g18030
rosa_chinensis	RchiOBHm_Chr2g0126491 RchiOBHm_Chr2g0152701 RchiOBHm_Chr6g0264331 RchiOBHm_Chr6g0264341 RchiOBHm_Chr6g0264351 RchiOBHm_Chr7g0184031 RchiOBHm_Chr7g0184041
rosa_laevigata	RLG00000005008
rosa_multiflora	Rmu_sc0000532.1_g000028 Rmu_sc0004712.1_g000014 Rmu_sc0004712.1_g000024 Rmu_sc0007533.1_g000011 Rmu_sc0010483.1_g000003
rosa_roxburghii	Rroxscaffold_176G00431720 Rroxscaffold_3G00219040 Rroxscaffold_3G00219050 Rroxscaffold_3G00269980 Rroxscaffold_5G00361620
rosa_rugosa	Rorug01G0193000 Rorug03G0324200 Rorug06G0461700
rosa_samantha	Rh2AG316100 Rh2AG421900 Rh2BG328900 Rh2CG409100 Rh4CG063900 Rh5CG558100 Rh6BG128500 Rh6CG126800 Rh6DG114100 Rh7AG063000 Rh7AG499000 Rh7AG499100 Rh7BG063200 Rh7BG469900 Rh7BG470100 Rh7CG064200 Rh7DG063300 Rh7DG063600 Rh7DG392100
rosa_wichuraiana	Rw0G022820 Rw6G011500 Rw7G005210 Rw7G005220 Rw7G020530 Rw7G042150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	108, 282
AccI	GTMKAC	1 cut(s)	945
AccII	CGCG	7 cut(s)	57, 177, 311, 366, 402, 808, 1755
AclWI	GGATC	3 cut(s)	485, 986, 1557
AcoI	YGGCCR	1 cut(s)	403
AcsI	RAATTY	6 cut(s)	459, 469, 498, 596, 925, 1848
AcuI	CTGAAG	4 cut(s)	443, 1040, 1552, 1560
AcyI	GRCGYC	1 cut(s)	1413
AfaI	GTAC	4 cut(s)	488, 1038, 1167, 1231
AfiI	CCNNNNNNNGG	3 cut(s)	357, 623, 1948
AgeI	ACCGGT	1 cut(s)	1700
AgsI	TTSAA	7 cut(s)	524, 532, 583, 964, 1014, 1507, 2011
AhdI	GACNNNNNGTC	1 cut(s)	190
AjnI	CCWGG	4 cut(s)	405, 1186, 1282, 1476
AjuI	GAANNNNNNNTTGG	2 cut(s)	1982, 2014
Alw21I	GWGCWC	1 cut(s)	1821
Alw26I	GTCTC	3 cut(s)	194, 1623, 1960
AlwI	GGATC	3 cut(s)	485, 986, 1557
AlwNI	CAGNNNCTG	1 cut(s)	1969
AoxI	GGCC	4 cut(s)	403, 606, 1257, 1986
ApoI	RAATTY	6 cut(s)	459, 469, 498, 596, 925, 1848
AseI	ATTAAT	1 cut(s)	933
AsiGI	ACCGGT	1 cut(s)	1700
Asp700I	GAANNNNTTC	1 cut(s)	320
AspLEI	GCGC	8 cut(s)	59, 179, 311, 366, 402, 808, 810, 1757
AspS9I	GGNCC	1 cut(s)	1698
AsuC2I	CCSGG	2 cut(s)	504, 1942
AsuHPI	GGTGA	4 cut(s)	31, 697, 806, 1301
AsuII	TTCGAA	1 cut(s)	1270
AvaII	GGWCC	1 cut(s)	1698
BanII	GRGCYC	2 cut(s)	705, 1821
BauI	CACGAG	1 cut(s)	1811
BbsI	GAAGAC	2 cut(s)	571, 1175
Bbv12I	GWGCWC	1 cut(s)	1821
BccI	CCATC	5 cut(s)	140, 224, 398, 1939, 2003
BceAI	ACGGC	1 cut(s)	53
BcgI	CGANNNNNNTGC	2 cut(s)	52, 86
BciT130I	CCWGG	4 cut(s)	407, 1188, 1284, 1478
BciVI	GTATCC	1 cut(s)	1382
BclI	TGATCA	2 cut(s)	415, 796
BcnI	CCSGG	2 cut(s)	504, 1942
BcoDI	GTCTC	3 cut(s)	194, 1623, 1960
BfaI	CTAG	3 cut(s)	648, 1194, 1869
BfmI	CTRYAG	2 cut(s)	1659, 1907
BfuI	GTATCC	1 cut(s)	1382
Bme1390I	CCNGG	6 cut(s)	407, 504, 1188, 1284, 1478, 1942
Bme18I	GGWCC	1 cut(s)	1698
BmeRI	GACNNNNNGTC	1 cut(s)	190
BmgT120I	GGNCC	1 cut(s)	1698
BmiI	GGNNCC	2 cut(s)	1447, 2026
BmrFI	CCNGG	6 cut(s)	407, 504, 1188, 1284, 1478, 1942
BmsI	GCATC	7 cut(s)	828, 1154, 1282, 1349, 1367, 1699, 1723
BpiI	GAAGAC	2 cut(s)	571, 1175
BpmI	CTGGAG	3 cut(s)	110, 1305, 1991
Bpu14I	TTCGAA	1 cut(s)	1270
BpuEI	CTTGAG	2 cut(s)	758, 1760
BpuMI	CCSGG	2 cut(s)	504, 1942
Bsa29I	ATCGAT	1 cut(s)	1652
BsaAI	YACGTR	1 cut(s)	1229
BsaHI	GRCGYC	1 cut(s)	1413
BsaI	GGTCTC	1 cut(s)	194
BsaJI	CCNNGG	5 cut(s)	204, 267, 356, 1282, 1477
BsaWI	WCCGGW	1 cut(s)	1700
BsaXI	ACNNNNNCTCC	3 cut(s)	1904, 1934, 2009
Bsc4I	CCNNNNNNNGG	3 cut(s)	357, 623, 1948
Bse118I	RCCGGY	2 cut(s)	791, 1700
Bse1I	ACTGG	3 cut(s)	127, 438, 1974
Bse3DI	GCAATG	6 cut(s)	345, 848, 1100, 1353, 1407, 1899
BseBI	CCWGG	4 cut(s)	407, 1188, 1284, 1478
BseCI	ATCGAT	1 cut(s)	1652
BseDI	CCNNGG	5 cut(s)	204, 267, 356, 1282, 1477
BseGI	GGATG	3 cut(s)	12, 886, 1950
BseLI	CCNNNNNNNGG	3 cut(s)	357, 623, 1948
BseMI	GCAATG	6 cut(s)	345, 848, 1100, 1353, 1407, 1899
BseMII	CTCAG	1 cut(s)	1997
BseNI	ACTGG	3 cut(s)	127, 438, 1974
BsePI	GCGCGC	1 cut(s)	806
BseRI	GAGGAG	3 cut(s)	8, 88, 1688
BsgI	GTGCAG	1 cut(s)	1587
Bsh1236I	CGCG	7 cut(s)	57, 177, 311, 366, 402, 808, 1755
BshFI	GGCC	4 cut(s)	405, 608, 1259, 1988
BshTI	ACCGGT	1 cut(s)	1700
BshVI	ATCGAT	1 cut(s)	1652
BsiHKAI	GWGCWC	1 cut(s)	1821
BsiSI	CCGG	6 cut(s)	197, 504, 792, 1701, 1926, 1942
BsiWI	CGTACG	1 cut(s)	486
BslI	CCNNNNNNNGG	3 cut(s)	357, 623, 1948
BsmAI	GTCTC	3 cut(s)	194, 1623, 1960
BsmI	GAATGC	1 cut(s)	1615
BsnI	GGCC	4 cut(s)	405, 608, 1259, 1988
Bso31I	GGTCTC	1 cut(s)	194
Bsp119I	TTCGAA	1 cut(s)	1270
Bsp1286I	GDGCHC	2 cut(s)	705, 1821
Bsp1407I	TGTACA	1 cut(s)	1165
Bsp143I	GATC	6 cut(s)	415, 490, 796, 978, 1562, 1649
BspANI	GGCC	4 cut(s)	405, 608, 1259, 1988
BspCNI	CTCAG	1 cut(s)	1996
BspDI	ATCGAT	1 cut(s)	1652
BspFNI	CGCG	7 cut(s)	57, 177, 311, 366, 402, 808, 1755
BspLI	GGNNCC	2 cut(s)	1447, 2026
BspMAI	CTGCAG	1 cut(s)	1911
BspPI	GGATC	3 cut(s)	485, 986, 1557
BspQI	GCTCTTC	1 cut(s)	311
BspT104I	TTCGAA	1 cut(s)	1270
BspTNI	GGTCTC	1 cut(s)	194
BsrBI	CCGCTC	2 cut(s)	108, 282
BsrDI	GCAATG	6 cut(s)	345, 848, 1100, 1353, 1407, 1899
BsrFI	RCCGGY	2 cut(s)	791, 1700
BsrGI	TGTACA	1 cut(s)	1165
BsrI	ACTGG	3 cut(s)	127, 438, 1974
BssAI	RCCGGY	2 cut(s)	791, 1700
BssECI	CCNNGG	5 cut(s)	204, 267, 356, 1282, 1477
BssHII	GCGCGC	1 cut(s)	806
BssMI	GATC	6 cut(s)	415, 490, 796, 978, 1562, 1649
BssNI	GRCGYC	1 cut(s)	1413
BssSI	CACGAG	1 cut(s)	1811
BssT1I	CCWWGG	3 cut(s)	204, 267, 356
Bst2BI	CACGAG	1 cut(s)	1811
Bst2UI	CCWGG	4 cut(s)	407, 1188, 1284, 1478
Bst4CI	ACNGT	6 cut(s)	709, 1102, 1212, 1234, 1488, 1660
Bst6I	CTCTTC	5 cut(s)	92, 311, 419, 819, 1059
BstACI	GRCGYC	1 cut(s)	1413
BstAPI	GCANNNNNTGC	1 cut(s)	1610
BstAUI	TGTACA	1 cut(s)	1165
BstBAI	YACGTR	1 cut(s)	1229
BstBI	TTCGAA	1 cut(s)	1270
BstC8I	GCNNGC	8 cut(s)	61, 175, 307, 341, 622, 655, 808, 1821
BstDEI	CTNAG	2 cut(s)	1596, 1983
BstF5I	GGATG	3 cut(s)	12, 886, 1950
BstFNI	CGCG	7 cut(s)	57, 177, 311, 366, 402, 808, 1755
BstHHI	GCGC	8 cut(s)	59, 179, 311, 366, 402, 808, 810, 1757
BstKTI	GATC	6 cut(s)	418, 493, 799, 981, 1565, 1652
BstMAI	GTCTC	3 cut(s)	194, 1623, 1960
BstMBI	GATC	6 cut(s)	415, 490, 796, 978, 1562, 1649
BstNI	CCWGG	4 cut(s)	407, 1188, 1284, 1478
BstNSI	RCATGY	1 cut(s)	343
BstSCI	CCNGG	6 cut(s)	405, 502, 1186, 1282, 1476, 1940
BstSFI	CTRYAG	2 cut(s)	1659, 1907
BstSNI	TACGTA	1 cut(s)	1229
BstUI	CGCG	7 cut(s)	57, 177, 311, 366, 402, 808, 1755
BstV2I	GAAGAC	2 cut(s)	571, 1175
Bsu15I	ATCGAT	1 cut(s)	1652
BsuI	GTATCC	1 cut(s)	1382
BsuRI	GGCC	4 cut(s)	405, 608, 1259, 1988
BsuTUI	ATCGAT	1 cut(s)	1652
BtgZI	GCGATG	2 cut(s)	243, 249
BtsCI	GGATG	3 cut(s)	12, 886, 1950
BtsI	GCAGTG	1 cut(s)	1838
BtsIMutI	CAGTG	2 cut(s)	445, 1838
Cac8I	GCNNGC	8 cut(s)	61, 175, 307, 341, 622, 655, 808, 1821
CaiI	CAGNNNCTG	1 cut(s)	1969
CfoI	GCGC	8 cut(s)	59, 179, 311, 366, 402, 808, 810, 1757
Cfr10I	RCCGGY	2 cut(s)	791, 1700
Cfr13I	GGNCC	1 cut(s)	1698
ClaI	ATCGAT	1 cut(s)	1652
CseI	GACGC	3 cut(s)	355, 370, 1421
Csp6I	GTAC	4 cut(s)	487, 1037, 1166, 1230
CspAI	ACCGGT	1 cut(s)	1700
CviAII	CATG	4 cut(s)	340, 817, 1396, 1957
CviQI	GTAC	4 cut(s)	487, 1037, 1166, 1230
DdeI	CTNAG	2 cut(s)	1596, 1983
DpnI	GATC	6 cut(s)	417, 492, 798, 980, 1564, 1651
DpnII	GATC	6 cut(s)	415, 490, 796, 978, 1562, 1649
DriI	GACNNNNNGTC	1 cut(s)	190
EaeI	YGGCCR	1 cut(s)	403
Eam1104I	CTCTTC	5 cut(s)	92, 311, 419, 819, 1059
Eam1105I	GACNNNNNGTC	1 cut(s)	190
EarI	CTCTTC	5 cut(s)	92, 311, 419, 819, 1059
EciI	GGCGGA	3 cut(s)	110, 1758, 1944
Ecl136II	GAGCTC	1 cut(s)	1819
Eco105I	TACGTA	1 cut(s)	1229
Eco130I	CCWWGG	3 cut(s)	204, 267, 356
Eco24I	GRGCYC	2 cut(s)	705, 1821
Eco31I	GGTCTC	1 cut(s)	194
Eco32I	GATATC	1 cut(s)	919
Eco47I	GGWCC	1 cut(s)	1698
Eco53kI	GAGCTC	1 cut(s)	1819
Eco57I	CTGAAG	4 cut(s)	443, 1040, 1552, 1560
EcoICRI	GAGCTC	1 cut(s)	1819
EcoRI	GAATTC	1 cut(s)	498
EcoRII	CCWGG	4 cut(s)	405, 1186, 1282, 1476
EcoRV	GATATC	1 cut(s)	919
EcoT14I	CCWWGG	3 cut(s)	204, 267, 356
EcoT22I	ATGCAT	1 cut(s)	1615
EcoT38I	GRGCYC	2 cut(s)	705, 1821
ErhI	CCWWGG	3 cut(s)	204, 267, 356
FaeI	CATG	4 cut(s)	343, 820, 1399, 1960
FalI	AAGNNNNNCTT	2 cut(s)	1487, 1519
FatI	CATG	4 cut(s)	339, 816, 1395, 1956
FauI	CCCGC	1 cut(s)	625
FbaI	TGATCA	2 cut(s)	415, 796
FblI	GTMKAC	1 cut(s)	945
FokI	GGATG	2 cut(s)	893, 1957
FriOI	GRGCYC	2 cut(s)	705, 1821
FspBI	CTAG	3 cut(s)	648, 1194, 1869
GlaI	GCGC	8 cut(s)	58, 178, 310, 365, 401, 807, 809, 1756
GsuI	CTGGAG	3 cut(s)	110, 1305, 1991
HaeIII	GGCC	4 cut(s)	405, 608, 1259, 1988
HapII	CCGG	6 cut(s)	197, 504, 792, 1701, 1926, 1942
HgaI	GACGC	3 cut(s)	355, 370, 1421
HhaI	GCGC	8 cut(s)	59, 179, 311, 366, 402, 808, 810, 1757
Hin1I	GRCGYC	1 cut(s)	1413
Hin1II	CATG	4 cut(s)	343, 820, 1399, 1960
Hin6I	GCGC	8 cut(s)	57, 177, 309, 364, 400, 806, 808, 1755
HinP1I	GCGC	8 cut(s)	57, 177, 309, 364, 400, 806, 808, 1755
HincII	GTYRAC	1 cut(s)	1917
HindII	GTYRAC	1 cut(s)	1917
HinfI	GANTC	8 cut(s)	185, 215, 427, 750, 942, 1241, 1932, 1953
HpaII	CCGG	6 cut(s)	197, 504, 792, 1701, 1926, 1942
HphI	GGTGA	4 cut(s)	31, 697, 806, 1301
Hpy166II	GTNNAC	4 cut(s)	443, 946, 1166, 1917
Hpy188III	TCNNGA	8 cut(s)	298, 370, 385, 583, 737, 922, 1628, 1647
Hpy8I	GTNNAC	4 cut(s)	443, 946, 1166, 1917
Hpy99I	CGWCG	4 cut(s)	74, 193, 196, 329
HpyAV	CCTTC	9 cut(s)	190, 214, 295, 361, 932, 965, 1015, 1576, 1891
HpyCH4III	ACNGT	6 cut(s)	709, 1102, 1212, 1234, 1488, 1660
HpyCH4IV	ACGT	2 cut(s)	1228, 1919
HpyF3I	CTNAG	2 cut(s)	1596, 1983
HpySE526I	ACGT	2 cut(s)	1228, 1919
Hsp92I	GRCGYC	1 cut(s)	1413
Hsp92II	CATG	4 cut(s)	343, 820, 1399, 1960
HspAI	GCGC	8 cut(s)	57, 177, 309, 364, 400, 806, 808, 1755
Ksp22I	TGATCA	2 cut(s)	415, 796
Kzo9I	GATC	6 cut(s)	415, 490, 796, 978, 1562, 1649
LguI	GCTCTTC	1 cut(s)	311
LmnI	GCTCC	7 cut(s)	113, 162, 339, 1816, 1865, 1976, 2030
LweI	GCATC	7 cut(s)	828, 1154, 1282, 1349, 1367, 1699, 1723
MaeI	CTAG	3 cut(s)	648, 1194, 1869
MaeII	ACGT	2 cut(s)	1228, 1919
MaeIII	GTNAC	2 cut(s)	1459, 1703
MalI	GATC	6 cut(s)	417, 492, 798, 980, 1564, 1651
MbiI	CCGCTC	2 cut(s)	108, 282
MboI	GATC	6 cut(s)	415, 490, 796, 978, 1562, 1649
MhlI	GDGCHC	2 cut(s)	705, 1821
MlyI	GAGTC	4 cut(s)	179, 436, 951, 1941
MmeI	TCCRAC	3 cut(s)	727, 1084, 1858
Mph1103I	ATGCAT	1 cut(s)	1615
MroXI	GAANNNNTTC	1 cut(s)	320
MseI	TTAA	6 cut(s)	246, 933, 1178, 1439, 1473, 1853
MslI	CAYNNNNRTG	2 cut(s)	815, 1400
MspA1I	CMGCKG	2 cut(s)	421, 1553
MspI	CCGG	6 cut(s)	197, 504, 792, 1701, 1926, 1942
MspR9I	CCNGG	6 cut(s)	407, 504, 1188, 1284, 1478, 1942
Mva1269I	GAATGC	1 cut(s)	1615
MvaI	CCWGG	4 cut(s)	407, 1188, 1284, 1478
MvnI	CGCG	7 cut(s)	57, 177, 311, 366, 402, 808, 1755
NciI	CCSGG	2 cut(s)	504, 1942
NdeII	GATC	6 cut(s)	415, 490, 796, 978, 1562, 1649
NlaIII	CATG	4 cut(s)	343, 820, 1399, 1960
NlaIV	GGNNCC	2 cut(s)	1447, 2026
NmuCI	GTSAC	1 cut(s)	1459
NsiI	ATGCAT	1 cut(s)	1615
NspI	RCATGY	1 cut(s)	343
NspV	TTCGAA	1 cut(s)	1270
PaeI	GCATGC	1 cut(s)	343
PauI	GCGCGC	1 cut(s)	806
PciSI	GCTCTTC	1 cut(s)	311
PctI	GAATGC	1 cut(s)	1615
PdmI	GAANNNNTTC	1 cut(s)	320
PfeI	GAWTC	4 cut(s)	215, 750, 1241, 1953
Pfl23II	CGTACG	1 cut(s)	486
PinAI	ACCGGT	1 cut(s)	1700
PleI	GAGTC	4 cut(s)	179, 435, 950, 1940
PpsI	GAGTC	4 cut(s)	179, 435, 950, 1940
Ppu21I	YACGTR	1 cut(s)	1229
PshBI	ATTAAT	1 cut(s)	933
Psp124BI	GAGCTC	1 cut(s)	1821
Psp6I	CCWGG	4 cut(s)	405, 1186, 1282, 1476
PspGI	CCWGG	4 cut(s)	405, 1186, 1282, 1476
PspLI	CGTACG	1 cut(s)	486
PspN4I	GGNNCC	2 cut(s)	1447, 2026
PspPI	GGNCC	1 cut(s)	1698
PstI	CTGCAG	1 cut(s)	1911
PstNI	CAGNNNCTG	1 cut(s)	1969
PteI	GCGCGC	1 cut(s)	806
PvuII	CAGCTG	2 cut(s)	421, 1553
RsaI	GTAC	4 cut(s)	488, 1038, 1167, 1231
RsaNI	GTAC	4 cut(s)	487, 1037, 1166, 1230
RseI	CAYNNNNRTG	2 cut(s)	815, 1400
SacI	GAGCTC	1 cut(s)	1821
SapI	GCTCTTC	1 cut(s)	311
SaqAI	TTAA	6 cut(s)	246, 933, 1178, 1439, 1473, 1853
Sau3AI	GATC	6 cut(s)	415, 490, 796, 978, 1562, 1649
Sau96I	GGNCC	1 cut(s)	1698
SchI	GAGTC	4 cut(s)	179, 436, 951, 1941
ScrFI	CCNGG	6 cut(s)	407, 504, 1188, 1284, 1478, 1942
SduI	GDGCHC	2 cut(s)	705, 1821
SfaNI	GCATC	7 cut(s)	828, 1154, 1282, 1349, 1367, 1699, 1723
SfcI	CTRYAG	2 cut(s)	1659, 1907
SfuI	TTCGAA	1 cut(s)	1270
SinI	GGWCC	1 cut(s)	1698
SmiMI	CAYNNNNRTG	2 cut(s)	815, 1400
SmlI	CTYRAG	2 cut(s)	737, 1775
SmoI	CTYRAG	2 cut(s)	737, 1775
SnaBI	TACGTA	1 cut(s)	1229
SphI	GCATGC	1 cut(s)	343
SspMI	CTAG	3 cut(s)	648, 1194, 1869
SstI	GAGCTC	1 cut(s)	1821
StyD4I	CCNGG	6 cut(s)	405, 502, 1186, 1282, 1476, 1940
StyI	CCWWGG	3 cut(s)	204, 267, 356
TaaI	ACNGT	6 cut(s)	709, 1102, 1212, 1234, 1488, 1660
TaiI	ACGT	2 cut(s)	1231, 1922
TatI	WGTACW	2 cut(s)	1036, 1165
TauI	GCSGC	4 cut(s)	57, 285, 405, 1262
TfiI	GAWTC	4 cut(s)	215, 750, 1241, 1953
Tru1I	TTAA	6 cut(s)	246, 933, 1178, 1439, 1473, 1853
Tru9I	TTAA	6 cut(s)	246, 933, 1178, 1439, 1473, 1853
TscAI	CASTG	2 cut(s)	445, 1845
TseFI	GTSAC	1 cut(s)	1459
Tsp45I	GTSAC	1 cut(s)	1459
TspDTI	ATGAA	6 cut(s)	491, 712, 919, 951, 1204, 1910
TspRI	CASTG	2 cut(s)	445, 1845
VpaK11BI	GGWCC	1 cut(s)	1698
VspI	ATTAAT	1 cut(s)	933
XapI	RAATTY	6 cut(s)	459, 469, 498, 596, 925, 1848
XceI	RCATGY	1 cut(s)	343
XmiI	GTMKAC	1 cut(s)	945
XmnI	GAANNNNTTC	1 cut(s)	320
XspI	CTAG	3 cut(s)	648, 1194, 1869
Zsp2I	ATGCAT	1 cut(s)	1615

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.