Rh2BG328900

Aluminum-activated malate transporter

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
42899353 .. 42902026
2674 bp
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UTR
Exon/CDS
Intron
Rh2BG328900.1

Sequence Viewer

Length: 426 bp
ATGGCCGGAAGTTGGTATGAGGTTGTGATTGTAGTCAATATTTTCATAGCAGGTTTTCTTGCTAGCTATATCAAGCTTTATTCGCCAATGAAGACTTATGAATACGGATTTCGGCTGTTCTTGTTGACATACTGTATAGTTTTAGTATCCGGGAGTACATCATCATTTTTCGGAACATCTATTTTTGGAACATTGAAGTTAATTTGGGTTTTTAGTTGTGATTCTGTCAAGAAGTTCAATGGGATGTGGAGGGAAATCAAACTTTTGGCTGCATCAAAACCGGACATCGAATCAATGTCTGACGTGGCAGCAAGTGGAGGATACTATATGGCAATGGCAGCAGATGCCATTGTTGCAGAAAATTTAACCTTAACTAGTTCCATTGGAGTTGTCACAGGTGAATTTAAATATATTTTATATAATTGA

Protein Analysis

141

Amino Acids

15.6

Weight (kDa)

6.19

Isoelectric Point (pI)

25.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALMT PF11744 3 - 52 1.5e-14 Aluminium activated malate transporter
Peptidase_S49 PF01343 89 - 137 6.9e-12 Peptidase family S49
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 41
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 361, 401
AfaI GTAC 1 cut(s) 157
AfiI CCNNNNNNNGG 1 cut(s) 12
AgsI TTSAA 2 cut(s) 196, 238
AhlI ACTAGT 1 cut(s) 374
AjiI CACGTC 1 cut(s) 304
AluBI AGCT 2 cut(s) 66, 76
AluI AGCT 2 cut(s) 66, 76
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 3 cut(s) 269, 308, 338
ApoI RAATTY 2 cut(s) 361, 401
AsuC2I CCSGG 1 cut(s) 151
AsuHPI GGTGA 1 cut(s) 410
AsuNHI GCTAGC 1 cut(s) 62
BbsI GAAGAC 1 cut(s) 98
BbvI GCAGC 3 cut(s) 256, 320, 350
BciVI GTATCC 2 cut(s) 157, 314
BcnI CCSGG 1 cut(s) 151
BcuI ACTAGT 1 cut(s) 374
BfaI CTAG 2 cut(s) 63, 375
BfuAI ACCTGC 1 cut(s) 41
BfuI GTATCC 2 cut(s) 157, 314
BisI GCNGC 3 cut(s) 270, 309, 339
BlsI GCNGC 3 cut(s) 271, 310, 340
Bme1390I CCNGG 1 cut(s) 151
BmgBI CACGTC 1 cut(s) 304
BmrFI CCNGG 1 cut(s) 151
BmsI GCATC 2 cut(s) 281, 334
BmtI GCTAGC 1 cut(s) 66
BpiI GAAGAC 1 cut(s) 98
BpuMI CCSGG 1 cut(s) 151
BsaWI WCCGGW 1 cut(s) 280
Bsc4I CCNNNNNNNGG 1 cut(s) 12
Bse3DI GCAATG 1 cut(s) 339
BseGI GGATG 1 cut(s) 249
BseLI CCNNNNNNNGG 1 cut(s) 12
BseMI GCAATG 1 cut(s) 339
BseXI GCAGC 3 cut(s) 256, 320, 350
BshFI GGCC 1 cut(s) 5
BsiSI CCGG 3 cut(s) 6, 150, 281
BslI CCNNNNNNNGG 1 cut(s) 12
BsnI GGCC 1 cut(s) 5
BspANI GGCC 1 cut(s) 5
BspMI ACCTGC 1 cut(s) 41
BspOI GCTAGC 1 cut(s) 66
BsrDI GCAATG 1 cut(s) 339
Bst4CI ACNGT 1 cut(s) 134
BstAPI GCANNNNNTGC 1 cut(s) 344
BstC8I GCNNGC 1 cut(s) 64
BstF5I GGATG 1 cut(s) 249
BstMWI GCNNNNNNNGC 4 cut(s) 82, 338, 344, 353
BstSCI CCNGG 1 cut(s) 149
BstV1I GCAGC 3 cut(s) 256, 320, 350
BstV2I GAAGAC 1 cut(s) 98
BsuI GTATCC 2 cut(s) 157, 314
BsuRI GGCC 1 cut(s) 5
BtrI CACGTC 1 cut(s) 304
BtsCI GGATG 1 cut(s) 249
BveI ACCTGC 1 cut(s) 41
Cac8I GCNNGC 1 cut(s) 64
Csp6I GTAC 1 cut(s) 156
CviJI RGCY 5 cut(s) 5, 66, 76, 115, 269
CviKI_1 RGCY 5 cut(s) 5, 66, 76, 115, 269
CviQI GTAC 1 cut(s) 156
DraI TTTAAA 1 cut(s) 406
EaeI YGGCCR 1 cut(s) 3
Fnu4HI GCNGC 3 cut(s) 270, 309, 339
FokI GGATG 1 cut(s) 256
Fsp4HI GCNGC 3 cut(s) 270, 309, 339
FspBI CTAG 2 cut(s) 63, 375
GluI GCNGC 3 cut(s) 270, 309, 339
HaeIII GGCC 1 cut(s) 5
HapII CCGG 3 cut(s) 6, 150, 281
HincII GTYRAC 1 cut(s) 126
HindII GTYRAC 1 cut(s) 126
HindIII AAGCTT 1 cut(s) 74
HinfI GANTC 2 cut(s) 221, 290
HpaII CCGG 3 cut(s) 6, 150, 281
HphI GGTGA 1 cut(s) 410
Hpy166II GTNNAC 1 cut(s) 126
Hpy188I TCNGA 2 cut(s) 173, 301
Hpy188III TCNNGA 1 cut(s) 229
Hpy8I GTNNAC 1 cut(s) 126
HpyCH4III ACNGT 1 cut(s) 134
HpyCH4IV ACGT 1 cut(s) 303
HpyCH4V TGCA 2 cut(s) 272, 356
HpyF10VI GCNNNNNNNGC 4 cut(s) 82, 338, 344, 353
HpySE526I ACGT 1 cut(s) 303
LpnPI CCDG 5 cut(s) 19, 36, 163, 294, 381
Lsp1109I GCAGC 3 cut(s) 256, 320, 350
LweI GCATC 2 cut(s) 281, 334
MaeI CTAG 2 cut(s) 63, 375
MaeII ACGT 1 cut(s) 303
MaeIII GTNAC 1 cut(s) 391
MboII GAAGA 1 cut(s) 103
MluCI AATT 4 cut(s) 201, 361, 401, 421
MnlI CCTC 3 cut(s) 13, 243, 311
MseI TTAA 4 cut(s) 200, 365, 371, 405
MspI CCGG 3 cut(s) 6, 150, 281
MspR9I CCNGG 1 cut(s) 151
MwoI GCNNNNNNNGC 4 cut(s) 82, 338, 344, 353
NciI CCSGG 1 cut(s) 151
NheI GCTAGC 1 cut(s) 62
NmuCI GTSAC 1 cut(s) 391
PfeI GAWTC 2 cut(s) 221, 290
PfoI TCCNGGA 1 cut(s) 149
PkrI GCNGC 3 cut(s) 271, 310, 340
RsaI GTAC 1 cut(s) 157
RsaNI GTAC 1 cut(s) 156
SaqAI TTAA 4 cut(s) 200, 365, 371, 405
SatI GCNGC 3 cut(s) 270, 309, 339
ScrFI CCNGG 1 cut(s) 151
SetI ASST 7 cut(s) 24, 55, 68, 78, 306, 371, 400
SfaNI GCATC 2 cut(s) 281, 334
SmiI ATTTAAAT 1 cut(s) 406
SpeI ACTAGT 1 cut(s) 374
Sse9I AATT 4 cut(s) 201, 361, 401, 421
SspI AATATT 1 cut(s) 40
SspMI CTAG 2 cut(s) 63, 375
StyD4I CCNGG 1 cut(s) 149
SwaI ATTTAAAT 1 cut(s) 406
TaaI ACNGT 1 cut(s) 134
TaiI ACGT 1 cut(s) 306
TaqI TCGA 1 cut(s) 288
TasI AATT 4 cut(s) 201, 361, 401, 421
TatI WGTACW 1 cut(s) 155
TfiI GAWTC 2 cut(s) 221, 290
Tru1I TTAA 4 cut(s) 200, 365, 371, 405
Tru9I TTAA 4 cut(s) 200, 365, 371, 405
TseFI GTSAC 1 cut(s) 391
TseI GCWGC 3 cut(s) 269, 308, 338
Tsp45I GTSAC 1 cut(s) 391
TspDTI ATGAA 3 cut(s) 34, 104, 114
TspGWI ACGGA 1 cut(s) 120
XapI RAATTY 2 cut(s) 361, 401
XspI CTAG 2 cut(s) 63, 375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.