protease
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 191 |
| AcsI | RAATTY | 3 cut(s) | 160, 222, 387 |
| AfaI | GTAC | 1 cut(s) | 520 |
| AflIII | ACRYGT | 1 cut(s) | 419 |
| AgsI | TTSAA | 6 cut(s) | 160, 168, 178, 309, 349, 549 |
| AleI | CACNNNNGTG | 1 cut(s) | 399 |
| AluBI | AGCT | 1 cut(s) | 214 |
| AluI | AGCT | 1 cut(s) | 214 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 140 |
| ApeKI | GCWGC | 1 cut(s) | 82 |
| ApoI | RAATTY | 3 cut(s) | 160, 222, 387 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 46 |
| AsuHPI | GGTGA | 2 cut(s) | 82, 545 |
| BbvI | GCAGC | 1 cut(s) | 69 |
| BccI | CCATC | 2 cut(s) | 239, 367 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 133, 167 |
| BclI | TGATCA | 3 cut(s) | 424, 451, 496 |
| BisI | GCNGC | 1 cut(s) | 83 |
| BlsI | GCNGC | 1 cut(s) | 84 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 211, 243 |
| Bpu10I | CCTNAGC | 1 cut(s) | 215 |
| BpuEI | CTTGAG | 1 cut(s) | 213 |
| BsaBI | GATNNNNATC | 1 cut(s) | 408 |
| Bse8I | GATNNNNATC | 1 cut(s) | 408 |
| BseJI | GATNNNNATC | 1 cut(s) | 408 |
| BseMII | CTCAG | 1 cut(s) | 195 |
| BseXI | GCAGC | 1 cut(s) | 69 |
| BsgI | GTGCAG | 2 cut(s) | 173, 377 |
| BsmI | GAATGC | 1 cut(s) | 544 |
| Bsp143I | GATC | 4 cut(s) | 409, 424, 451, 496 |
| BspCNI | CTCAG | 1 cut(s) | 194 |
| BssMI | GATC | 4 cut(s) | 409, 424, 451, 496 |
| Bst4CI | ACNGT | 4 cut(s) | 14, 149, 304, 401 |
| Bst6I | CTCTTC | 1 cut(s) | 372 |
| BstDEI | CTNAG | 2 cut(s) | 181, 215 |
| BstKTI | GATC | 4 cut(s) | 412, 427, 454, 499 |
| BstMBI | GATC | 4 cut(s) | 409, 424, 451, 496 |
| BstNSI | RCATGY | 2 cut(s) | 360, 423 |
| BstV1I | GCAGC | 1 cut(s) | 69 |
| BtsIMutI | CAGTG | 4 cut(s) | 19, 154, 189, 406 |
| CaiI | CAGNNNCTG | 1 cut(s) | 140 |
| CseI | GACGC | 1 cut(s) | 326 |
| Csp6I | GTAC | 1 cut(s) | 519 |
| CviAII | CATG | 2 cut(s) | 357, 420 |
| CviJI | RGCY | 1 cut(s) | 214 |
| CviKI_1 | RGCY | 1 cut(s) | 214 |
| CviQI | GTAC | 1 cut(s) | 519 |
| DdeI | CTNAG | 2 cut(s) | 181, 215 |
| DpnI | GATC | 4 cut(s) | 411, 426, 453, 498 |
| DpnII | GATC | 4 cut(s) | 409, 424, 451, 496 |
| Eam1104I | CTCTTC | 1 cut(s) | 372 |
| EarI | CTCTTC | 1 cut(s) | 372 |
| FaeI | CATG | 2 cut(s) | 360, 423 |
| FaiI | YATR | 7 cut(s) | 6, 53, 314, 358, 421, 530, 565 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 573 |
| FatI | CATG | 2 cut(s) | 356, 419 |
| FbaI | TGATCA | 3 cut(s) | 424, 451, 496 |
| FblI | GTMKAC | 1 cut(s) | 191 |
| Fnu4HI | GCNGC | 1 cut(s) | 83 |
| Fsp4HI | GCNGC | 1 cut(s) | 83 |
| GluI | GCNGC | 1 cut(s) | 83 |
| HgaI | GACGC | 1 cut(s) | 326 |
| Hin1II | CATG | 2 cut(s) | 360, 423 |
| HincII | GTYRAC | 2 cut(s) | 192, 362 |
| HindII | GTYRAC | 2 cut(s) | 192, 362 |
| HinfI | GANTC | 3 cut(s) | 131, 137, 536 |
| HphI | GGTGA | 2 cut(s) | 82, 545 |
| Hpy166II | GTNNAC | 2 cut(s) | 192, 362 |
| Hpy188I | TCNGA | 4 cut(s) | 136, 261, 330, 483 |
| Hpy188III | TCNNGA | 4 cut(s) | 230, 251, 339, 431 |
| Hpy8I | GTNNAC | 2 cut(s) | 192, 362 |
| HpyAV | CCTTC | 1 cut(s) | 336 |
| HpyCH4III | ACNGT | 4 cut(s) | 14, 149, 304, 401 |
| HpyCH4V | TGCA | 5 cut(s) | 8, 55, 154, 203, 394 |
| HpyF3I | CTNAG | 2 cut(s) | 181, 215 |
| Hsp92II | CATG | 2 cut(s) | 360, 423 |
| Ksp22I | TGATCA | 3 cut(s) | 424, 451, 496 |
| Kzo9I | GATC | 4 cut(s) | 409, 424, 451, 496 |
| Lsp1109I | GCAGC | 1 cut(s) | 69 |
| MalI | GATC | 4 cut(s) | 411, 426, 453, 498 |
| MboI | GATC | 4 cut(s) | 409, 424, 451, 496 |
| MboII | GAAGA | 4 cut(s) | 254, 389, 419, 531 |
| MluCI | AATT | 4 cut(s) | 160, 222, 387, 441 |
| MnlI | CCTC | 1 cut(s) | 60 |
| MroXI | GAANNNNTTC | 1 cut(s) | 46 |
| MseI | TTAA | 2 cut(s) | 105, 282 |
| MslI | CAYNNNNRTG | 2 cut(s) | 399, 465 |
| Mva1269I | GAATGC | 1 cut(s) | 544 |
| NdeII | GATC | 4 cut(s) | 409, 424, 451, 496 |
| NlaIII | CATG | 2 cut(s) | 360, 423 |
| NspI | RCATGY | 2 cut(s) | 360, 423 |
| OliI | CACNNNNGTG | 1 cut(s) | 399 |
| PciI | ACATGT | 1 cut(s) | 419 |
| PctI | GAATGC | 1 cut(s) | 544 |
| PdmI | GAANNNNTTC | 1 cut(s) | 46 |
| PfeI | GAWTC | 3 cut(s) | 131, 137, 536 |
| PkrI | GCNGC | 1 cut(s) | 84 |
| PscI | ACATGT | 1 cut(s) | 419 |
| PstNI | CAGNNNCTG | 1 cut(s) | 140 |
| RsaI | GTAC | 1 cut(s) | 520 |
| RsaNI | GTAC | 1 cut(s) | 519 |
| RseI | CAYNNNNRTG | 2 cut(s) | 399, 465 |
| SalI | GTCGAC | 1 cut(s) | 190 |
| SaqAI | TTAA | 2 cut(s) | 105, 282 |
| SatI | GCNGC | 1 cut(s) | 83 |
| Sau3AI | GATC | 4 cut(s) | 409, 424, 451, 496 |
| SetI | ASST | 3 cut(s) | 216, 347, 586 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 399, 465 |
| SmlI | CTYRAG | 1 cut(s) | 228 |
| SmoI | CTYRAG | 1 cut(s) | 228 |
| Sse9I | AATT | 4 cut(s) | 160, 222, 387, 441 |
| TaaI | ACNGT | 4 cut(s) | 14, 149, 304, 401 |
| TaqI | TCGA | 2 cut(s) | 191, 412 |
| TaqII | GACCGA | 1 cut(s) | 542 |
| TasI | AATT | 4 cut(s) | 160, 222, 387, 441 |
| TatI | WGTACW | 1 cut(s) | 518 |
| TfiI | GAWTC | 3 cut(s) | 131, 137, 536 |
| Tru1I | TTAA | 2 cut(s) | 105, 282 |
| Tru9I | TTAA | 2 cut(s) | 105, 282 |
| TscAI | CASTG | 4 cut(s) | 19, 154, 189, 406 |
| TseI | GCWGC | 1 cut(s) | 82 |
| TspDTI | ATGAA | 2 cut(s) | 255, 420 |
| TspRI | CASTG | 4 cut(s) | 19, 154, 189, 406 |
| XapI | RAATTY | 3 cut(s) | 160, 222, 387 |
| XceI | RCATGY | 2 cut(s) | 360, 423 |
| XmiI | GTMKAC | 1 cut(s) | 191 |
| XmnI | GAANNNNTTC | 1 cut(s) | 46 |