protease
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 410 |
| AcsI | RAATTY | 3 cut(s) | 211, 280, 328 |
| AfaI | GTAC | 1 cut(s) | 619 |
| AhlI | ACTAGT | 2 cut(s) | 224, 559 |
| AjiI | CACGTC | 1 cut(s) | 154 |
| AluBI | AGCT | 4 cut(s) | 302, 359, 434, 493 |
| AluI | AGCT | 4 cut(s) | 302, 359, 434, 493 |
| Alw26I | GTCTC | 1 cut(s) | 283 |
| ApeKI | GCWGC | 5 cut(s) | 119, 158, 188, 356, 431 |
| ApoI | RAATTY | 3 cut(s) | 211, 280, 328 |
| BbvI | GCAGC | 5 cut(s) | 106, 170, 200, 368, 443 |
| BccI | CCATC | 1 cut(s) | 586 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 312, 346 |
| BciVI | GTATCC | 1 cut(s) | 164 |
| BcoDI | GTCTC | 1 cut(s) | 283 |
| BcuI | ACTAGT | 2 cut(s) | 224, 559 |
| BfaI | CTAG | 4 cut(s) | 225, 293, 560, 640 |
| BfmI | CTRYAG | 1 cut(s) | 378 |
| BfuAI | ACCTGC | 1 cut(s) | 410 |
| BfuI | GTATCC | 1 cut(s) | 164 |
| BisI | GCNGC | 5 cut(s) | 120, 159, 189, 357, 432 |
| BlsI | GCNGC | 5 cut(s) | 121, 160, 190, 358, 433 |
| BmcAI | AGTACT | 1 cut(s) | 619 |
| BmgBI | CACGTC | 1 cut(s) | 154 |
| BmsI | GCATC | 4 cut(s) | 12, 131, 184, 418 |
| BpuEI | CTTGAG | 1 cut(s) | 479 |
| BsaWI | WCCGGW | 1 cut(s) | 130 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 80, 110 |
| Bse3DI | GCAATG | 2 cut(s) | 32, 189 |
| BseGI | GGATG | 2 cut(s) | 99, 578 |
| BseMI | GCAATG | 2 cut(s) | 32, 189 |
| BseMII | CTCAG | 1 cut(s) | 485 |
| BseXI | GCAGC | 5 cut(s) | 106, 170, 200, 368, 443 |
| BsgI | GTGCAG | 1 cut(s) | 306 |
| BsiSI | CCGG | 1 cut(s) | 131 |
| BsmAI | GTCTC | 1 cut(s) | 283 |
| BspCNI | CTCAG | 1 cut(s) | 484 |
| BspMI | ACCTGC | 1 cut(s) | 410 |
| BsrDI | GCAATG | 2 cut(s) | 32, 189 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 194 |
| BstDEI | CTNAG | 2 cut(s) | 315, 471 |
| BstF5I | GGATG | 2 cut(s) | 99, 578 |
| BstMAI | GTCTC | 1 cut(s) | 283 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 188, 194, 203, 320 |
| BstSFI | CTRYAG | 1 cut(s) | 378 |
| BstV1I | GCAGC | 5 cut(s) | 106, 170, 200, 368, 443 |
| BsuI | GTATCC | 1 cut(s) | 164 |
| BtrI | CACGTC | 1 cut(s) | 154 |
| BtsCI | GGATG | 2 cut(s) | 99, 578 |
| BtsI | GCAGTG | 1 cut(s) | 587 |
| BtsIMutI | CAGTG | 1 cut(s) | 587 |
| BveI | ACCTGC | 1 cut(s) | 410 |
| Csp6I | GTAC | 1 cut(s) | 618 |
| CviAII | CATG | 1 cut(s) | 551 |
| CviJI | RGCY | 7 cut(s) | 61, 119, 253, 302, 359, 434, 493 |
| CviKI_1 | RGCY | 7 cut(s) | 61, 119, 253, 302, 359, 434, 493 |
| CviQI | GTAC | 1 cut(s) | 618 |
| DdeI | CTNAG | 2 cut(s) | 315, 471 |
| EcoRI | GAATTC | 1 cut(s) | 328 |
| FaeI | CATG | 1 cut(s) | 554 |
| FatI | CATG | 1 cut(s) | 550 |
| Fnu4HI | GCNGC | 5 cut(s) | 120, 159, 189, 357, 432 |
| FokI | GGATG | 2 cut(s) | 106, 565 |
| Fsp4HI | GCNGC | 5 cut(s) | 120, 159, 189, 357, 432 |
| FspBI | CTAG | 4 cut(s) | 225, 293, 560, 640 |
| GluI | GCNGC | 5 cut(s) | 120, 159, 189, 357, 432 |
| HapII | CCGG | 1 cut(s) | 131 |
| Hin1II | CATG | 1 cut(s) | 554 |
| HinfI | GANTC | 1 cut(s) | 140 |
| HpaII | CCGG | 1 cut(s) | 131 |
| Hpy166II | GTNNAC | 1 cut(s) | 464 |
| Hpy188I | TCNGA | 2 cut(s) | 7, 151 |
| Hpy188III | TCNNGA | 2 cut(s) | 347, 623 |
| Hpy8I | GTNNAC | 1 cut(s) | 464 |
| HpyAV | CCTTC | 1 cut(s) | 594 |
| HpyCH4IV | ACGT | 1 cut(s) | 153 |
| HpyCH4V | TGCA | 8 cut(s) | 122, 206, 286, 323, 401, 431, 482, 572 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 188, 194, 203, 320 |
| HpyF3I | CTNAG | 2 cut(s) | 315, 471 |
| HpySE526I | ACGT | 1 cut(s) | 153 |
| Hsp92II | CATG | 1 cut(s) | 554 |
| LpnPI | CCDG | 6 cut(s) | 47, 144, 332, 405, 458, 608 |
| Lsp1109I | GCAGC | 5 cut(s) | 106, 170, 200, 368, 443 |
| LweI | GCATC | 4 cut(s) | 12, 131, 184, 418 |
| MaeI | CTAG | 4 cut(s) | 225, 293, 560, 640 |
| MaeII | ACGT | 1 cut(s) | 153 |
| MaeIII | GTNAC | 2 cut(s) | 241, 553 |
| MboII | GAAGA | 3 cut(s) | 20, 66, 354 |
| MluCI | AATT | 6 cut(s) | 13, 69, 211, 280, 328, 341 |
| MnlI | CCTC | 6 cut(s) | 77, 93, 161, 289, 385, 619 |
| MseI | TTAA | 5 cut(s) | 215, 221, 437, 450, 602 |
| MspI | CCGG | 1 cut(s) | 131 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 188, 194, 203, 320 |
| NlaIII | CATG | 1 cut(s) | 554 |
| NmuCI | GTSAC | 1 cut(s) | 241 |
| PfeI | GAWTC | 1 cut(s) | 140 |
| PkrI | GCNGC | 5 cut(s) | 121, 160, 190, 358, 433 |
| RsaI | GTAC | 1 cut(s) | 619 |
| RsaNI | GTAC | 1 cut(s) | 618 |
| SaqAI | TTAA | 5 cut(s) | 215, 221, 437, 450, 602 |
| SatI | GCNGC | 5 cut(s) | 120, 159, 189, 357, 432 |
| ScaI | AGTACT | 1 cut(s) | 619 |
| SetI | ASST | 8 cut(s) | 156, 221, 304, 361, 424, 436, 477, 495 |
| SfaNI | GCATC | 4 cut(s) | 12, 131, 184, 418 |
| SfcI | CTRYAG | 1 cut(s) | 378 |
| SmlI | CTYRAG | 1 cut(s) | 494 |
| SmoI | CTYRAG | 1 cut(s) | 494 |
| SpeI | ACTAGT | 2 cut(s) | 224, 559 |
| Sse9I | AATT | 6 cut(s) | 13, 69, 211, 280, 328, 341 |
| SspMI | CTAG | 4 cut(s) | 225, 293, 560, 640 |
| TaiI | ACGT | 1 cut(s) | 156 |
| TaqI | TCGA | 3 cut(s) | 39, 138, 256 |
| TasI | AATT | 6 cut(s) | 13, 69, 211, 280, 328, 341 |
| TatI | WGTACW | 1 cut(s) | 617 |
| TfiI | GAWTC | 1 cut(s) | 140 |
| Tru1I | TTAA | 5 cut(s) | 215, 221, 437, 450, 602 |
| Tru9I | TTAA | 5 cut(s) | 215, 221, 437, 450, 602 |
| TscAI | CASTG | 1 cut(s) | 594 |
| TseFI | GTSAC | 1 cut(s) | 241 |
| TseI | GCWGC | 5 cut(s) | 119, 158, 188, 356, 431 |
| Tsp45I | GTSAC | 1 cut(s) | 241 |
| TspRI | CASTG | 1 cut(s) | 594 |
| XapI | RAATTY | 3 cut(s) | 211, 280, 328 |
| XspI | CTAG | 4 cut(s) | 225, 293, 560, 640 |
| ZrmI | AGTACT | 1 cut(s) | 619 |