Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0001011

Physical Location & Seq

Genomic Coordinates Reverse (-)

14530308 .. 14534725

Gene Structure 4418 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1184000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGTCGGCTCCGGCGCCGTCGACCAGCTCAACCTCGCCACCACCACCCACAGCTCCGGCGCCTTCTGCGACTCCTAGCGCACCGCCTCCATCGACCCCGAGCGCACTGCCACCAGCGACCCCGAGCGCGCCGCCACCAGCCACTCCGTCGTCACCACCACCACCGTCTTCGACCACACCCACACCACCATCGACAACTCCATCTCCGGCCTCTTCTGCATCTCCGCCGACATCAACCACTCCCTCTCCTCCACCGCCGAAATCAACCACCCCATCTCCTCCACCTCCGAAATCAACCACCCCATCTCCTCCTCCGCCGACTGGTTCGGGTTCTACGCCTTCTACCCCGTCAAAAAGTCCTCCGCCTCCGCCTCAATCGTCTTCGTCGCCGTCGCCACCATCTTCAGGCTTGGACACGGGGGTTATAATCGGGATTGCCATCGGGGCAGTGGCGATCCTAGCGGTGCTGAGTCTTCTCTGCATTTGTTGCAGTAAGAAGAAGAAAAGGAGAAGAAGTGATGAAGAGTATTATATGCCTCCGCCGCCGCCTCCTGGGCCCAAAGTTGACCCATACGGTGGTGGGCCTTCGCATGAGTGGCAACAAAATGCTCCTCCGCCTGGTAATCATGCAGTCACAATGATGCCAAAGCCATCTCCGCCACCACCAGTAGCATCACGGCCACCACACTCACCACAATATAATCCAAGTCCGGGAGCAGCACCACCACCACCTTTCACAAGCAGCAGTGGAGGTTCTGGTTCCAATTATTCAGGGGGTGATCTACCCCCACCACCACCTCCACCAGGCTATACCTTGGGATTTTCTAAAAGCACATTCACATATGAGGAACTAGCATTGGCAACTGAAGGCTTCTCGGATTCCAATCTTCTTGGTCAAGGTGGATTTGGATACGTACACAAAGGAGTCCTTCCAAATGGGAAGGAAGTAGCGGTCAAGCAGCTGAAAGCTGGAAGTGGGCAAGGGGAACGTGAATTCCAGGCAGAAGTTGAAATTATTAGCCGTGTACATCATAGACATCTTGTTTCACTGGTTGGATATTGCATGACTGGATCCGAGAGACTACTGGTTTATGAGTTTGTTCCCAATAATACTATGGAGTTTCACTTACATGGAAAAGGGCGACCTACCATGGATTGGTCAACAAGACTAAAAATTGCTTTAGGATCTGCCAAAGGAATAGCATATCTTCACGAAGACTGTCATCCAAAAATCATTCATCGTGATATTAAAGCAGCTAATATACTTTTGGATTTCAAGTTTGAGGCAAAGGTTGCGGATTTTGGACTTGCCAAGTTTTCGTCCGATGTTAATACTCACATTTCCACCCGAGTGATGGGGACTTTTGGGTATCTAGCTCCGGAATATGCTTCAAGTGGAAAACTCACTGACAAGTCAGATGTTTACTCCTTTGGTGTTATGCTTTTGGAGTTGATTACTGGACGCCGGCCTGTTGATGCATCTCAAACTTACATGGAGGATAGTTTGGTAGACTGGGCAAGGCCTGTGCTAAATCGAGCGTTGGAAGAAAGAAACTTTGATGAACTGGTTGACCCTAAGCTTCAAAACAGTTACGACCCCAATGAGATGGCTCGCATGGTTGCTTGTGCTGCAGCTTGTGTACGTCATTCTGCACGGCGTCGACCTCGAATGAGTCAGGTTGTCCGAGCTTTAGAGGGCGACGTGTCTCTTTCTGATCTCAATGAAGGAATCCGGCCTGGGCAGAGCAATGTCTATAGCTCTCACGGGAGCTCAGACTACGACACAAGCCAATACAAAGAGGACATGAAAAAGTTCAGGAAGATGGCATTAGGAAGCCAGGAGTACGGTGCTAGTAGCGAGTATAGCGCACCCACAAGCGATTACGGTTTGTATCCATCCGGCTCAAGCAGCGGGGAAGGCCAAAGCCGCCAAACCACCAGAGAAATGGAGTTGGGAAGGATAAAGAAAAACAACCACGGTTTTAGCAGCGGAACCTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 ko05169 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164 map05169

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

667

Amino Acids

70.28

Weight (kDa)

8.46

Isoelectric Point (pI)

70.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	293 - 497	3.6e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	295 - 564	5.7e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001011)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24540 AT3G24550
fragaria_vesca	FvH4_1g04680 FvH4_1g04680 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540
malus_domestica	MD02G1045800.v1.1 MD15G1184000.v1.1 MD15G1318900.v1.1 MD17G1193400.v1.1
prunus_persica	Prupe.3G068800_v2.0.a1 Prupe.7G232200_v2.0.a1
pyrus_communis	pycom02g03820 pycom09g12790 pycom15g16560 pycom17g19940
rosa_chinensis	RchiOBHm_Chr2g0090291 RchiOBHm_Chr2g0138371 RchiOBHm_Chr2g0138381 RchiOBHm_Chr2g0138481 RchiOBHm_Chr2g0138511 RchiOBHm_Chr2g0138521 RchiOBHm_Chr2g0138601 RchiOBHm_Chr6g0297471
rosa_laevigata	RLG00000016095 RLG00000019740 RLG00000019744 RLG00000019747
rosa_multiflora	Rmu_co8232347.1_g000001 Rmu_co8362561.1_g000001 Rmu_sc0000436.1_g000004 Rmu_sc0001534.1_g000011 Rmu_sc0006235.1_g000002 Rmu_sc0008467.1_g000011 Rmu_sc0012206.1_g000004
rosa_roxburghii	Rroxscaffold_2G00106070 Rroxscaffold_2G00106140 Rroxscaffold_2G00106150 Rroxscaffold_2G00106280 Rroxscaffold_2G00151310
rosa_rugosa	Rorug02G0006300 Rorug02G0351700 Rorug06G0272400
rosa_samantha	Rh2AG052200 Rh2AG400100 Rh2AG400200 Rh2AG400800 Rh2CG386300 Rh2DG052100 Rh2DG419800 Rh2DG419900 Rh2DG420100 Rh2DG420600 Rh2DG421200
rosa_wichuraiana	Rw2G004470 Rw2G032550 Rw2G032580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	425
AccB1I	GGYRCC	2 cut(s)	13, 58
AccB7I	CCANNNNNTGG	2 cut(s)	575, 1155
AccI	GTMKAC	3 cut(s)	20, 1509, 1660
AccII	CGCG	1 cut(s)	128
AccIII	TCCGGA	1 cut(s)	1378
AclWI	GGATC	4 cut(s)	448, 1065, 1078, 1192
AcoI	YGGCCR	1 cut(s)	677
AcsI	RAATTY	1 cut(s)	992
AcuI	CTGAAG	2 cut(s)	387, 885
AcyI	GRCGYC	4 cut(s)	14, 59, 1462, 1657
AfaI	GTAC	4 cut(s)	915, 1026, 1641, 1844
AfiI	CCNNNNNNNGG	9 cut(s)	320, 404, 551, 575, 617, 710, 803, 1155, 1354
AflIII	ACRYGT	1 cut(s)	1701
AgsI	TTSAA	4 cut(s)	1010, 1276, 1392, 1583
AjiI	CACGTC	1 cut(s)	1702
AjnI	CCWGG	6 cut(s)	550, 616, 802, 996, 1735, 1836
AleI	CACNNNNGTG	1 cut(s)	1349
AloI	GAACNNNNNNTCC	2 cut(s)	978, 1010
Alw21I	GWGCWC	1 cut(s)	1772
Alw26I	GTCTC	2 cut(s)	1072, 1710
AlwI	GGATC	4 cut(s)	448, 1065, 1078, 1192
Ama87I	CYCGRG	3 cut(s)	97, 121, 1347
Aor13HI	TCCGGA	1 cut(s)	1378
AoxI	GGCC	8 cut(s)	207, 554, 581, 677, 1466, 1520, 1733, 1918
ApaI	GGGCCC	1 cut(s)	558
ApeKI	GCWGC	8 cut(s)	716, 741, 958, 1253, 1628, 1631, 1908, 1986
ApoI	RAATTY	1 cut(s)	992
Asp700I	GAANNNNTTC	1 cut(s)	1811
AspLEI	GCGC	7 cut(s)	16, 61, 80, 104, 128, 130, 1868
AspS9I	GGNCC	3 cut(s)	554, 555, 581
AsuC2I	CCSGG	1 cut(s)	711
AsuHPI	GGTGA	3 cut(s)	144, 681, 788
AvaI	CYCGRG	3 cut(s)	97, 121, 1347
BaeGI	GKGCMC	1 cut(s)	558
BamHI	GGATCC	1 cut(s)	1070
BanI	GGYRCC	2 cut(s)	13, 58
BanII	GRGCYC	2 cut(s)	558, 1772
BbsI	GAAGAC	4 cut(s)	159, 372, 464, 1221
Bbv12I	GWGCWC	1 cut(s)	1772
BbvI	GCAGC	7 cut(s)	728, 753, 970, 1265, 1615, 1643, 1920
BceAI	ACGGC	4 cut(s)	373, 692, 1005, 1670
BcgI	CGANNNNNNTGC	2 cut(s)	88, 122
BciT130I	CCWGG	6 cut(s)	552, 618, 804, 998, 1737, 1838
BciVI	GTATCC	2 cut(s)	902, 1902
BcnI	CCSGG	1 cut(s)	711
BcoDI	GTCTC	2 cut(s)	1072, 1710
BfaI	CTAG	5 cut(s)	75, 458, 851, 1373, 1851
BfmI	CTRYAG	2 cut(s)	1629, 1753
BfoI	RGCGCY	2 cut(s)	17, 62
BfuI	GTATCC	2 cut(s)	902, 1902
BglI	GCCNNNNNGGC	2 cut(s)	443, 553
Bme1390I	CCNGG	7 cut(s)	552, 618, 711, 804, 998, 1737, 1838
BmeT110I	CYCGRG	3 cut(s)	97, 121, 1347
BmgBI	CACGTC	1 cut(s)	1702
BmgT120I	GGNCC	3 cut(s)	554, 555, 581
BmiI	GGNNCC	7 cut(s)	9, 15, 60, 556, 760, 1072, 1993
BmrFI	CCNGG	7 cut(s)	552, 618, 711, 804, 998, 1737, 1838
BmrI	ACTGGG	1 cut(s)	1522
BmsI	GCATC	5 cut(s)	227, 630, 680, 1465, 1487
BmuI	ACTGGG	1 cut(s)	1522
BpiI	GAAGAC	4 cut(s)	159, 372, 464, 1221
Bpu10I	CCTNAGC	1 cut(s)	1575
BpuEI	CTTGAG	1 cut(s)	1888
BpuMI	CCSGG	1 cut(s)	711
BsaAI	YACGTR	1 cut(s)	913
BsaBI	GATNNNNATC	2 cut(s)	437, 882
BsaHI	GRCGYC	4 cut(s)	14, 59, 1462, 1657
BsaJI	CCNNGG	5 cut(s)	551, 813, 1149, 1736, 1975
BsaWI	WCCGGW	1 cut(s)	1378
Bsc4I	CCNNNNNNNGG	9 cut(s)	320, 404, 551, 575, 617, 710, 803, 1155, 1354
Bse118I	RCCGGY	1 cut(s)	1464
Bse1I	ACTGG	8 cut(s)	325, 665, 1053, 1072, 1089, 1462, 1517, 1569
Bse3DI	GCAATG	1 cut(s)	1753
Bse8I	GATNNNNATC	2 cut(s)	437, 882
BseAI	TCCGGA	1 cut(s)	1378
BseBI	CCWGG	6 cut(s)	552, 618, 804, 998, 1737, 1838
BseDI	CCNNGG	5 cut(s)	551, 813, 1149, 1736, 1975
BseGI	GGATG	2 cut(s)	1222, 1895
BseJI	GATNNNNATC	2 cut(s)	437, 882
BseLI	CCNNNNNNNGG	9 cut(s)	320, 404, 551, 575, 617, 710, 803, 1155, 1354
BseMI	GCAATG	1 cut(s)	1753
BseMII	CTCAG	2 cut(s)	458, 1785
BseNI	ACTGG	8 cut(s)	325, 665, 1053, 1072, 1089, 1462, 1517, 1569
BsePI	GCGCGC	1 cut(s)	126
BseRI	GAGGAG	5 cut(s)	237, 267, 297, 300, 600
BseSI	GKGCMC	1 cut(s)	558
BseXI	GCAGC	7 cut(s)	728, 753, 970, 1265, 1615, 1643, 1920
BsgI	GTGCAG	1 cut(s)	1635
Bsh1236I	CGCG	1 cut(s)	128
BshFI	GGCC	8 cut(s)	209, 556, 583, 679, 1468, 1522, 1735, 1920
BshNI	GGYRCC	2 cut(s)	13, 58
BsiHKAI	GWGCWC	1 cut(s)	1772
BsiHKCI	CYCGRG	3 cut(s)	97, 121, 1347
BsiSI	CCGG	8 cut(s)	11, 56, 206, 710, 1379, 1465, 1732, 1899
BslFI	GGGAC	1 cut(s)	1372
BslI	CCNNNNNNNGG	9 cut(s)	320, 404, 551, 575, 617, 710, 803, 1155, 1354
BsmAI	GTCTC	2 cut(s)	1072, 1710
BsmFI	GGGAC	1 cut(s)	1372
BsnI	GGCC	8 cut(s)	209, 556, 583, 679, 1468, 1522, 1735, 1920
BsoBI	CYCGRG	3 cut(s)	97, 121, 1347
Bsp120I	GGGCCC	1 cut(s)	554
Bsp1286I	GDGCHC	2 cut(s)	558, 1772
Bsp13I	TCCGGA	1 cut(s)	1378
Bsp1407I	TGTACA	1 cut(s)	1024
Bsp143I	GATC	5 cut(s)	453, 778, 1070, 1184, 1714
Bsp19I	CCATGG	1 cut(s)	1149
BspANI	GGCC	8 cut(s)	209, 556, 583, 679, 1468, 1522, 1735, 1920
BspCNI	CTCAG	2 cut(s)	459, 1784
BspEI	TCCGGA	1 cut(s)	1378
BspFNI	CGCG	1 cut(s)	128
BspLI	GGNNCC	7 cut(s)	9, 15, 60, 556, 760, 1072, 1993
BspMAI	CTGCAG	1 cut(s)	1633
BspPI	GGATC	4 cut(s)	448, 1065, 1078, 1192
BspT107I	GGYRCC	2 cut(s)	13, 58
BsrDI	GCAATG	1 cut(s)	1753
BsrFI	RCCGGY	1 cut(s)	1464
BsrGI	TGTACA	1 cut(s)	1024
BsrI	ACTGG	8 cut(s)	325, 665, 1053, 1072, 1089, 1462, 1517, 1569
BssAI	RCCGGY	1 cut(s)	1464
BssECI	CCNNGG	5 cut(s)	551, 813, 1149, 1736, 1975
BssHII	GCGCGC	1 cut(s)	126
BssMI	GATC	5 cut(s)	453, 778, 1070, 1184, 1714
BssNI	GRCGYC	4 cut(s)	14, 59, 1462, 1657
BssT1I	CCWWGG	2 cut(s)	813, 1149
Bst2UI	CCWGG	6 cut(s)	552, 618, 804, 998, 1737, 1838
Bst4CI	ACNGT	7 cut(s)	165, 575, 1220, 1589, 1847, 1886, 1979
Bst6I	CTCTTC	2 cut(s)	217, 516
BstACI	GRCGYC	4 cut(s)	14, 59, 1462, 1657
BstAPI	GCANNNNNTGC	2 cut(s)	486, 1292
BstAUI	TGTACA	1 cut(s)	1024
BstBAI	YACGTR	1 cut(s)	913
BstC8I	GCNNGC	3 cut(s)	128, 1466, 1612
BstDEI	CTNAG	3 cut(s)	467, 1575, 1771
BstDSI	CCRYGG	2 cut(s)	1149, 1975
BstENI	CCTNNNNNAGG	1 cut(s)	801
BstF5I	GGATG	2 cut(s)	1222, 1895
BstFNI	CGCG	1 cut(s)	128
BstH2I	RGCGCY	2 cut(s)	17, 62
BstHHI	GCGC	7 cut(s)	16, 61, 80, 104, 128, 130, 1868
BstKTI	GATC	5 cut(s)	456, 781, 1073, 1187, 1717
BstMAI	GTCTC	2 cut(s)	1072, 1710
BstMBI	GATC	5 cut(s)	453, 778, 1070, 1184, 1714
BstNI	CCWGG	6 cut(s)	552, 618, 804, 998, 1737, 1838
BstSCI	CCNGG	7 cut(s)	550, 616, 709, 802, 996, 1735, 1836
BstSFI	CTRYAG	2 cut(s)	1629, 1753
BstSLI	GKGCMC	1 cut(s)	558
BstSNI	TACGTA	1 cut(s)	913
BstUI	CGCG	1 cut(s)	128
BstV1I	GCAGC	7 cut(s)	728, 753, 970, 1265, 1615, 1643, 1920
BstV2I	GAAGAC	4 cut(s)	159, 372, 464, 1221
BstX2I	RGATCY	2 cut(s)	1070, 1184
BstXI	CCANNNNNNTGG	2 cut(s)	1606, 1945
BstYI	RGATCY	2 cut(s)	1070, 1184
BsuI	GTATCC	2 cut(s)	902, 1902
BsuRI	GGCC	8 cut(s)	209, 556, 583, 679, 1468, 1522, 1735, 1920
BtgI	CCRYGG	2 cut(s)	1149, 1975
BtrI	CACGTC	1 cut(s)	1702
BtsCI	GGATG	2 cut(s)	1222, 1895
BtsI	GCAGTG	3 cut(s)	104, 453, 751
BtsIMutI	CAGTG	5 cut(s)	104, 453, 751, 1046, 1404
Cac8I	GCNNGC	3 cut(s)	128, 1466, 1612
CfoI	GCGC	7 cut(s)	16, 61, 80, 104, 128, 130, 1868
Cfr10I	RCCGGY	1 cut(s)	1464
Cfr13I	GGNCC	3 cut(s)	554, 555, 581
CseI	GACGC	2 cut(s)	1470, 1646
Csp6I	GTAC	4 cut(s)	914, 1025, 1640, 1843
CviAII	CATG	8 cut(s)	590, 626, 1063, 1130, 1150, 1492, 1615, 1804
CviQI	GTAC	4 cut(s)	914, 1025, 1640, 1843
DdeI	CTNAG	3 cut(s)	467, 1575, 1771
DinI	GGCGCC	2 cut(s)	15, 60
DpnI	GATC	5 cut(s)	455, 780, 1072, 1186, 1716
DpnII	GATC	5 cut(s)	453, 778, 1070, 1184, 1714
EaeI	YGGCCR	1 cut(s)	677
Eam1104I	CTCTTC	2 cut(s)	217, 516
EarI	CTCTTC	2 cut(s)	217, 516
EciI	GGCGGA	7 cut(s)	213, 303, 351, 357, 528, 603, 645
Ecl136II	GAGCTC	1 cut(s)	1770
Eco105I	TACGTA	1 cut(s)	913
Eco130I	CCWWGG	2 cut(s)	813, 1149
Eco147I	AGGCCT	1 cut(s)	1522
Eco24I	GRGCYC	2 cut(s)	558, 1772
Eco53kI	GAGCTC	1 cut(s)	1770
Eco57I	CTGAAG	2 cut(s)	387, 885
Eco88I	CYCGRG	3 cut(s)	97, 121, 1347
EcoICRI	GAGCTC	1 cut(s)	1770
EcoNI	CCTNNNNNAGG	1 cut(s)	801
EcoRI	GAATTC	1 cut(s)	992
EcoRII	CCWGG	6 cut(s)	550, 616, 802, 996, 1735, 1836
EcoT14I	CCWWGG	2 cut(s)	813, 1149
EcoT22I	ATGCAT	1 cut(s)	1480
EcoT38I	GRGCYC	2 cut(s)	558, 1772
EgeI	GGCGCC	2 cut(s)	15, 60
EheI	GGCGCC	2 cut(s)	15, 60
ErhI	CCWWGG	2 cut(s)	813, 1149
FaeI	CATG	8 cut(s)	593, 629, 1066, 1133, 1153, 1495, 1618, 1807
FalI	AAGNNNNNCTT	2 cut(s)	912, 944
FaqI	GGGAC	1 cut(s)	1372
FatI	CATG	8 cut(s)	589, 625, 1062, 1129, 1149, 1491, 1614, 1803
FauI	CCCGC	1 cut(s)	1904
FauNDI	CATATG	1 cut(s)	841
FblI	GTMKAC	3 cut(s)	20, 1509, 1660
FokI	GGATG	2 cut(s)	1209, 1882
FriOI	GRGCYC	2 cut(s)	558, 1772
FspBI	CTAG	5 cut(s)	75, 458, 851, 1373, 1851
GlaI	GCGC	7 cut(s)	15, 60, 79, 103, 127, 129, 1867
HaeII	RGCGCY	2 cut(s)	17, 62
HaeIII	GGCC	8 cut(s)	209, 556, 583, 679, 1468, 1522, 1735, 1920
HapII	CCGG	8 cut(s)	11, 56, 206, 710, 1379, 1465, 1732, 1899
HgaI	GACGC	2 cut(s)	1470, 1646
HhaI	GCGC	7 cut(s)	16, 61, 80, 104, 128, 130, 1868
Hin1I	GRCGYC	4 cut(s)	14, 59, 1462, 1657
Hin1II	CATG	8 cut(s)	593, 629, 1066, 1133, 1153, 1495, 1618, 1807
Hin6I	GCGC	7 cut(s)	14, 59, 78, 102, 126, 128, 1866
HinP1I	GCGC	7 cut(s)	14, 59, 78, 102, 126, 128, 1866
HincII	GTYRAC	5 cut(s)	21, 565, 1161, 1570, 1661
HindII	GTYRAC	5 cut(s)	21, 565, 1161, 1570, 1661
HindIII	AAGCTT	1 cut(s)	1577
HinfI	GANTC	6 cut(s)	70, 469, 878, 924, 1672, 1728
HpaII	CCGG	8 cut(s)	11, 56, 206, 710, 1379, 1465, 1732, 1899
HphI	GGTGA	3 cut(s)	144, 681, 788
Hpy188I	TCNGA	8 cut(s)	288, 877, 1075, 1324, 1417, 1685, 1714, 1774
Hpy188III	TCNNGA	5 cut(s)	430, 1211, 1241, 1379, 1816
Hpy99I	CGWCG	6 cut(s)	22, 151, 388, 394, 1662, 1703
HpyAV	CCTTC	9 cut(s)	72, 348, 594, 860, 934, 938, 1718, 1910, 1950
HpyCH4III	ACNGT	7 cut(s)	165, 575, 1220, 1589, 1847, 1886, 1979
HpyCH4IV	ACGT	4 cut(s)	912, 988, 1642, 1701
HpyCH4V	TGCA	8 cut(s)	218, 480, 489, 629, 1062, 1478, 1631, 1652
HpyF3I	CTNAG	3 cut(s)	467, 1575, 1771
HpySE526I	ACGT	4 cut(s)	912, 988, 1642, 1701
Hsp92I	GRCGYC	4 cut(s)	14, 59, 1462, 1657
Hsp92II	CATG	8 cut(s)	593, 629, 1066, 1133, 1153, 1495, 1618, 1807
HspAI	GCGC	7 cut(s)	14, 59, 78, 102, 126, 128, 1866
KasI	GGCGCC	2 cut(s)	13, 58
Kpn2I	TCCGGA	1 cut(s)	1378
KroI	GCCGGC	1 cut(s)	1464
KroNI	GCCGGC	1 cut(s)	1466
Kzo9I	GATC	5 cut(s)	453, 778, 1070, 1184, 1714
LmnI	GCTCC	6 cut(s)	13, 58, 613, 713, 1381, 1767
Lsp1109I	GCAGC	7 cut(s)	728, 753, 970, 1265, 1615, 1643, 1920
LweI	GCATC	5 cut(s)	227, 630, 680, 1465, 1487
MaeI	CTAG	5 cut(s)	75, 458, 851, 1373, 1851
MaeII	ACGT	4 cut(s)	912, 988, 1642, 1701
MaeIII	GTNAC	3 cut(s)	150, 631, 1589
MalI	GATC	5 cut(s)	455, 780, 1072, 1186, 1716
MboI	GATC	5 cut(s)	453, 778, 1070, 1184, 1714
MflI	RGATCY	2 cut(s)	1070, 1184
MhlI	GDGCHC	2 cut(s)	558, 1772
MluCI	AATT	4 cut(s)	763, 992, 1011, 1173
Mly113I	GGCGCC	2 cut(s)	14, 59
MlyI	GAGTC	4 cut(s)	64, 478, 933, 1681
MmeI	TCCRAC	2 cut(s)	1033, 1521
Mph1103I	ATGCAT	1 cut(s)	1480
MroI	TCCGGA	1 cut(s)	1378
MroNI	GCCGGC	1 cut(s)	1464
MroXI	GAANNNNTTC	1 cut(s)	1811
MseI	TTAA	3 cut(s)	1248, 1329, 1999
MslI	CAYNNNNRTG	3 cut(s)	638, 1128, 1349
MspA1I	CMGCKG	3 cut(s)	961, 1911, 1989
MspI	CCGG	8 cut(s)	11, 56, 206, 710, 1379, 1465, 1732, 1899
MspR9I	CCNGG	7 cut(s)	552, 618, 711, 804, 998, 1737, 1838
MvaI	CCWGG	6 cut(s)	552, 618, 804, 998, 1737, 1838
MvnI	CGCG	1 cut(s)	128
NaeI	GCCGGC	1 cut(s)	1466
NarI	GGCGCC	2 cut(s)	14, 59
NciI	CCSGG	1 cut(s)	711
NcoI	CCATGG	1 cut(s)	1149
NdeI	CATATG	1 cut(s)	841
NdeII	GATC	5 cut(s)	453, 778, 1070, 1184, 1714
NgoMIV	GCCGGC	1 cut(s)	1464
NlaIII	CATG	8 cut(s)	593, 629, 1066, 1133, 1153, 1495, 1618, 1807
NlaIV	GGNNCC	7 cut(s)	9, 15, 60, 556, 760, 1072, 1993
NmuCI	GTSAC	2 cut(s)	150, 631
NsiI	ATGCAT	1 cut(s)	1480
OliI	CACNNNNGTG	1 cut(s)	1349
PauI	GCGCGC	1 cut(s)	126
PceI	AGGCCT	1 cut(s)	1522
PdiI	GCCGGC	1 cut(s)	1466
PdmI	GAANNNNTTC	1 cut(s)	1811
PfeI	GAWTC	2 cut(s)	878, 1728
PflMI	CCANNNNNTGG	2 cut(s)	575, 1155
PfoI	TCCNGGA	1 cut(s)	709
PleI	GAGTC	4 cut(s)	64, 477, 932, 1680
PluTI	GGCGCC	2 cut(s)	17, 62
PpsI	GAGTC	4 cut(s)	64, 477, 932, 1680
Ppu21I	YACGTR	1 cut(s)	913
PsiI	TTATAA	1 cut(s)	425
Psp124BI	GAGCTC	1 cut(s)	1772
Psp6I	CCWGG	6 cut(s)	550, 616, 802, 996, 1735, 1836
PspGI	CCWGG	6 cut(s)	550, 616, 802, 996, 1735, 1836
PspN4I	GGNNCC	7 cut(s)	9, 15, 60, 556, 760, 1072, 1993
PspOMI	GGGCCC	1 cut(s)	554
PspPI	GGNCC	3 cut(s)	554, 555, 581
PstI	CTGCAG	1 cut(s)	1633
PsuI	RGATCY	2 cut(s)	1070, 1184
PteI	GCGCGC	1 cut(s)	126
PvuII	CAGCTG	1 cut(s)	961
RsaI	GTAC	4 cut(s)	915, 1026, 1641, 1844
RsaNI	GTAC	4 cut(s)	914, 1025, 1640, 1843
RseI	CAYNNNNRTG	3 cut(s)	638, 1128, 1349
SacI	GAGCTC	1 cut(s)	1772
SalI	GTCGAC	2 cut(s)	19, 1659
SaqAI	TTAA	3 cut(s)	1248, 1329, 1999
Sau3AI	GATC	5 cut(s)	453, 778, 1070, 1184, 1714
Sau96I	GGNCC	3 cut(s)	554, 555, 581
SchI	GAGTC	4 cut(s)	64, 478, 933, 1681
ScrFI	CCNGG	7 cut(s)	552, 618, 711, 804, 998, 1737, 1838
SduI	GDGCHC	2 cut(s)	558, 1772
SfaNI	GCATC	5 cut(s)	227, 630, 680, 1465, 1487
SfcI	CTRYAG	2 cut(s)	1629, 1753
SfoI	GGCGCC	2 cut(s)	15, 60
SmiMI	CAYNNNNRTG	3 cut(s)	638, 1128, 1349
SmlI	CTYRAG	1 cut(s)	1903
SmoI	CTYRAG	1 cut(s)	1903
SnaBI	TACGTA	1 cut(s)	913
Sse9I	AATT	4 cut(s)	763, 992, 1011, 1173
SseBI	AGGCCT	1 cut(s)	1522
SspDI	GGCGCC	2 cut(s)	13, 58
SspMI	CTAG	5 cut(s)	75, 458, 851, 1373, 1851
SstI	GAGCTC	1 cut(s)	1772
StuI	AGGCCT	1 cut(s)	1522
StyD4I	CCNGG	7 cut(s)	550, 616, 709, 802, 996, 1735, 1836
StyI	CCWWGG	2 cut(s)	813, 1149
TaaI	ACNGT	7 cut(s)	165, 575, 1220, 1589, 1847, 1886, 1979
TaiI	ACGT	4 cut(s)	915, 991, 1645, 1704
TaqI	TCGA	7 cut(s)	20, 92, 170, 191, 1534, 1660, 1666
TasI	AATT	4 cut(s)	763, 992, 1011, 1173
TatI	WGTACW	1 cut(s)	1024
TauI	GCSGC	4 cut(s)	133, 544, 547, 1929
TfiI	GAWTC	2 cut(s)	878, 1728
Tru1I	TTAA	3 cut(s)	1248, 1329, 1999
Tru9I	TTAA	3 cut(s)	1248, 1329, 1999
TscAI	CASTG	5 cut(s)	111, 453, 751, 1053, 1411
TseFI	GTSAC	2 cut(s)	150, 631
TseI	GCWGC	8 cut(s)	716, 741, 958, 1253, 1628, 1631, 1908, 1986
Tsp45I	GTSAC	2 cut(s)	150, 631
TspDTI	ATGAA	5 cut(s)	534, 1226, 1575, 1737, 1820
TspGWI	ACGGA	1 cut(s)	135
TspRI	CASTG	5 cut(s)	111, 453, 751, 1053, 1411
Van91I	CCANNNNNTGG	2 cut(s)	575, 1155
XagI	CCTNNNNNAGG	1 cut(s)	801
XapI	RAATTY	1 cut(s)	992
XcmI	CCANNNNNNNNNTGG	4 cut(s)	445, 1111, 1351, 1942
XmiI	GTMKAC	3 cut(s)	20, 1509, 1660
XmnI	GAANNNNTTC	1 cut(s)	1811
XspI	CTAG	5 cut(s)	75, 458, 851, 1373, 1851
Zsp2I	ATGCAT	1 cut(s)	1480

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.