Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0001011

Physical Location & Seq

Genomic Coordinates Reverse (-)

4090791 .. 4094728

Gene Structure 3938 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG052200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1359 bp

ATGTCCACAACTCCGGCGCCCTCCTCGCCGCCGACCAACACCACCTCCCCACCACCCGCCGCACCGGCGCCCACAACCCCAAGCGCTCCTCCGCCAACAACCCCAAGCGCTCCTCCGCCAACAACTCCCGCCACTCCACCGCCCACAACTCCCGCCACTCCACCGCCGACGACCCCCAGCGCGCCGCCGCCCGCGACTCCGGCATCCCCGCCGCCGCCGTCAGGTAACCCACCTTCACCCCCAGCGCCCTCCACCCCAGCTCCGACATCTCCGGGGTCCTCGCCGCCGCCGCCGTCCACCCCAACCGTCACGTCGCCGCCTCCCCCCAAAACGCCGACCACGAACAAGAGCCCTCCGCCGCCCAAGTCGCCGTCGACAACACCGTCGCCGCCGTCGTCGTCGTCGTCATCGGGATTGGATACCGGGGTTATAGTGGGAATTGCTGTTGGGGCTGTGGCGATTCTAGTGGTGCTCAGTCTTTGCTGCATTTTTTGCTCCAAGAAGAAGAGGAGAAGAAGAGAGGAGCCTGTCTATTATGTGCCTCCGCCGCCGCCTCCAACCGGCCCTAAAGGCGAAATTTACTATGGTCCACCACGCCCGCATCAAAATACTCCTCCTCCACCTGCAGATCATCATGTAATCACAATGCCTAAGCCACCTCCTGCACAAGCTGTAGCATCCAGGCCACCGCCCTCGCCAGGATATACACCGCCACTGCAGCCATACAGCAGTGGAGGTTCTGGTTCCAATTATTCAGGGTCTGAAACTGCACTCCCACCACCTCCACCACCGGGGTATTCCTTGGGATTCTCTAAAAGCACGTTTACTTATGACGAACTGGCTTTGGCAACGGAAGGGTTCTCGGATTCCAATCTCCTTGGACAGGGTGGGTTTGGATATGTTCACAAAGGAGTTCTTCCCAATGGGAAGGAAGTAGCGGTCAAGCAGCTGAAGGCTGGAAGTGGGCAAGGGGAACGTGAATTCCAGGCAGAAGTTGAAATTATTAGCCGTGTACATCACAGACATCTGGTTTCGCTGGTTGGATACTGCATGACTGGATCCGAGAGACTACTTGTCTATGAATTTGTTCCAAATAACACTATGGAGTTCCACTTACATGGAAAAGGGAGACCTACCATGGATTGGTCCACAAGACTGAAAATCGCTTTAGGATCTGCAAAAGGACTGGCATATCTTCATGAGGATTGTCATCCTAAAATCATTCATCGTGATATCAAAGCAGCTAATATACTTTTGGATTTCAAGTTTGAGTGCAAGGTTGCAGACTTTGGTCTTGCCAAGCTTTCTTCTGATCTTAATACTCATGTTTCCACCCGAGTGATGGGGACTTTTGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 ko05169 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164 map05169

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

452

Amino Acids

46.9

Weight (kDa)

9.17

Isoelectric Point (pI)

71.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	289 - 441	2.2e-28	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	291 - 438	1.7e-31	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001011)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24540 AT3G24550
fragaria_vesca	FvH4_1g04680 FvH4_1g04680 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540
malus_domestica	MD02G1045800.v1.1 MD15G1184000.v1.1 MD15G1318900.v1.1 MD17G1193400.v1.1
prunus_persica	Prupe.3G068800_v2.0.a1 Prupe.7G232200_v2.0.a1
pyrus_communis	pycom02g03820 pycom09g12790 pycom15g16560 pycom17g19940
rosa_chinensis	RchiOBHm_Chr2g0090291 RchiOBHm_Chr2g0138371 RchiOBHm_Chr2g0138381 RchiOBHm_Chr2g0138481 RchiOBHm_Chr2g0138511 RchiOBHm_Chr2g0138521 RchiOBHm_Chr2g0138601 RchiOBHm_Chr6g0297471
rosa_laevigata	RLG00000016095 RLG00000019740 RLG00000019744 RLG00000019747
rosa_multiflora	Rmu_co8232347.1_g000001 Rmu_co8362561.1_g000001 Rmu_sc0000436.1_g000004 Rmu_sc0001534.1_g000011 Rmu_sc0006235.1_g000002 Rmu_sc0008467.1_g000011 Rmu_sc0012206.1_g000004
rosa_roxburghii	Rroxscaffold_2G00106070 Rroxscaffold_2G00106140 Rroxscaffold_2G00106150 Rroxscaffold_2G00106280 Rroxscaffold_2G00151310
rosa_rugosa	Rorug02G0006300 Rorug02G0351700 Rorug06G0272400
rosa_samantha	Rh2AG052200 Rh2AG400100 Rh2AG400200 Rh2AG400800 Rh2CG386300 Rh2DG052100 Rh2DG419800 Rh2DG419900 Rh2DG420100 Rh2DG420600 Rh2DG421200
rosa_wichuraiana	Rw2G004470 Rw2G032550 Rw2G032580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	631
AasI	GACNNNNNNGTC	1 cut(s)	382
Acc36I	ACCTGC	1 cut(s)	631
AccB1I	GGYRCC	2 cut(s)	16, 67
AccB7I	CCANNNNNTGG	1 cut(s)	1143
AccI	GTMKAC	1 cut(s)	374
AccII	CGCG	2 cut(s)	182, 194
AclWI	GGATC	3 cut(s)	1053, 1066, 1180
AcsI	RAATTY	3 cut(s)	576, 980, 1082
AcuI	CTGAAG	1 cut(s)	971
AcyI	GRCGYC	2 cut(s)	17, 68
AfaI	GTAC	1 cut(s)	1014
AfeI	AGCGCT	2 cut(s)	85, 109
AfiI	CCNNNNNNNGG	7 cut(s)	221, 560, 698, 791, 883, 1143, 1342
AgsI	TTSAA	2 cut(s)	998, 1264
AhdI	GACNNNNNGTC	1 cut(s)	1073
AjiI	CACGTC	1 cut(s)	312
AjnI	CCWGG	3 cut(s)	680, 697, 984
AleI	CACNNNNGTG	1 cut(s)	1337
AloI	GAACNNNNNNTCC	2 cut(s)	966, 998
AluBI	AGCT	5 cut(s)	260, 671, 949, 1244, 1303
AluI	AGCT	5 cut(s)	260, 671, 949, 1244, 1303
Alw21I	GWGCWC	1 cut(s)	474
Alw26I	GTCTC	2 cut(s)	1060, 1123
AlwI	GGATC	3 cut(s)	1053, 1066, 1180
AlwNI	CAGNNNCTG	1 cut(s)	761
Ama87I	CYCGRG	1 cut(s)	1335
Aor51HI	AGCGCT	2 cut(s)	85, 109
AoxI	GGCC	2 cut(s)	562, 683
ApeKI	GCWGC	4 cut(s)	483, 718, 946, 1241
ApoI	RAATTY	3 cut(s)	576, 980, 1082
Asp700I	GAANNNNTTC	1 cut(s)	1086
AspLEI	GCGC	7 cut(s)	19, 70, 86, 110, 182, 184, 247
AspS9I	GGNCC	4 cut(s)	276, 563, 587, 1146
AsuC2I	CCSGG	3 cut(s)	273, 424, 792
AsuHPI	GGTGA	1 cut(s)	228
AvaI	CYCGRG	1 cut(s)	1335
AvaII	GGWCC	3 cut(s)	276, 587, 1146
BaeI	ACNNNNGTAYC	2 cut(s)	411, 444
BamHI	GGATCC	1 cut(s)	1058
BanI	GGYRCC	2 cut(s)	16, 67
BanII	GRGCYC	1 cut(s)	353
BarI	GAAGNNNNNNTAC	2 cut(s)	217, 249
Bbv12I	GWGCWC	1 cut(s)	474
BbvI	GCAGC	4 cut(s)	470, 730, 958, 1253
BccI	CCATC	1 cut(s)	1336
BceAI	ACGGC	5 cut(s)	202, 277, 355, 376, 993
BciT130I	CCWGG	3 cut(s)	682, 699, 986
BciVI	GTATCC	2 cut(s)	412, 1037
BcnI	CCSGG	3 cut(s)	273, 424, 792
BcoDI	GTCTC	2 cut(s)	1060, 1123
BfaI	CTAG	1 cut(s)	464
BfmI	CTRYAG	3 cut(s)	624, 672, 716
BfoI	RGCGCY	5 cut(s)	20, 71, 87, 111, 248
BfuAI	ACCTGC	1 cut(s)	631
BfuI	GTATCC	2 cut(s)	412, 1037
BglI	GCCNNNNNGGC	2 cut(s)	65, 570
Bme1390I	CCNGG	6 cut(s)	273, 424, 682, 699, 792, 986
Bme18I	GGWCC	3 cut(s)	276, 587, 1146
BmeRI	GACNNNNNGTC	1 cut(s)	1073
BmeT110I	CYCGRG	1 cut(s)	1335
BmgBI	CACGTC	1 cut(s)	312
BmgT120I	GGNCC	4 cut(s)	276, 563, 587, 1146
BmiI	GGNNCC	6 cut(s)	18, 69, 277, 525, 745, 1060
BmrFI	CCNGG	6 cut(s)	273, 424, 682, 699, 792, 986
BmsI	GCATC	3 cut(s)	212, 610, 686
BoxI	GACNNNNGTC	1 cut(s)	1290
Bpu10I	CCTNAGC	1 cut(s)	651
BpuMI	CCSGG	3 cut(s)	273, 424, 792
BsaBI	GATNNNNATC	2 cut(s)	870, 1209
BsaHI	GRCGYC	2 cut(s)	17, 68
BsaI	GGTCTC	1 cut(s)	1123
BsaJI	CCNNGG	6 cut(s)	272, 423, 791, 801, 877, 1137
BsaXI	ACNNNNNCTCC	6 cut(s)	29, 59, 244, 274, 601, 631
Bsc4I	CCNNNNNNNGG	7 cut(s)	221, 560, 698, 791, 883, 1143, 1342
Bse118I	RCCGGY	2 cut(s)	64, 560
Bse1I	ACTGG	3 cut(s)	843, 1060, 1191
Bse8I	GATNNNNATC	2 cut(s)	870, 1209
BseBI	CCWGG	3 cut(s)	682, 699, 986
BseDI	CCNNGG	6 cut(s)	272, 423, 791, 801, 877, 1137
BseGI	GGATG	3 cut(s)	203, 677, 1210
BseJI	GATNNNNATC	2 cut(s)	870, 1209
BseLI	CCNNNNNNNGG	7 cut(s)	221, 560, 698, 791, 883, 1143, 1342
BseMII	CTCAG	1 cut(s)	487
BseNI	ACTGG	3 cut(s)	843, 1060, 1191
BsePI	GCGCGC	1 cut(s)	180
BseRI	GAGGAG	7 cut(s)	13, 78, 102, 523, 536, 603, 606
BseXI	GCAGC	4 cut(s)	470, 730, 958, 1253
BseYI	CCCAGC	3 cut(s)	176, 241, 256
BsgI	GTGCAG	2 cut(s)	648, 753
Bsh1236I	CGCG	2 cut(s)	182, 194
BshFI	GGCC	2 cut(s)	564, 685
BshNI	GGYRCC	2 cut(s)	16, 67
BsiHKAI	GWGCWC	1 cut(s)	474
BsiHKCI	CYCGRG	1 cut(s)	1335
BsiSI	CCGG	7 cut(s)	14, 65, 200, 272, 423, 561, 791
BslI	CCNNNNNNNGG	7 cut(s)	221, 560, 698, 791, 883, 1143, 1342
BsmAI	GTCTC	2 cut(s)	1060, 1123
BsnI	GGCC	2 cut(s)	564, 685
Bso31I	GGTCTC	1 cut(s)	1123
BsoBI	CYCGRG	1 cut(s)	1335
Bsp1286I	GDGCHC	2 cut(s)	353, 474
Bsp1407I	TGTACA	1 cut(s)	1012
Bsp143I	GATC	4 cut(s)	628, 1058, 1172, 1312
Bsp19I	CCATGG	1 cut(s)	1137
BspANI	GGCC	2 cut(s)	564, 685
BspCNI	CTCAG	1 cut(s)	486
BspFNI	CGCG	2 cut(s)	182, 194
BspHI	TCATGA	1 cut(s)	1198
BspLI	GGNNCC	6 cut(s)	18, 69, 277, 525, 745, 1060
BspMAI	CTGCAG	2 cut(s)	628, 720
BspMI	ACCTGC	1 cut(s)	631
BspPI	GGATC	3 cut(s)	1053, 1066, 1180
BspT107I	GGYRCC	2 cut(s)	16, 67
BspTNI	GGTCTC	1 cut(s)	1123
BsrFI	RCCGGY	2 cut(s)	64, 560
BsrGI	TGTACA	1 cut(s)	1012
BsrI	ACTGG	3 cut(s)	843, 1060, 1191
BssAI	RCCGGY	2 cut(s)	64, 560
BssECI	CCNNGG	6 cut(s)	272, 423, 791, 801, 877, 1137
BssHII	GCGCGC	1 cut(s)	180
BssMI	GATC	4 cut(s)	628, 1058, 1172, 1312
BssNI	GRCGYC	2 cut(s)	17, 68
BssT1I	CCWWGG	3 cut(s)	801, 877, 1137
Bst2UI	CCWGG	3 cut(s)	682, 699, 986
Bst4CI	ACNGT	2 cut(s)	307, 384
Bst6I	CTCTTC	2 cut(s)	500, 511
BstACI	GRCGYC	2 cut(s)	17, 68
BstAPI	GCANNNNNTGC	1 cut(s)	492
BstAUI	TGTACA	1 cut(s)	1012
BstC8I	GCNNGC	3 cut(s)	182, 192, 599
BstDEI	CTNAG	2 cut(s)	473, 651
BstDSI	CCRYGG	1 cut(s)	1137
BstEII	GGTNACC	1 cut(s)	224
BstENI	CCTNNNNNAGG	1 cut(s)	881
BstF5I	GGATG	3 cut(s)	203, 677, 1210
BstFNI	CGCG	2 cut(s)	182, 194
BstH2I	RGCGCY	5 cut(s)	20, 71, 87, 111, 248
BstHHI	GCGC	7 cut(s)	19, 70, 86, 110, 182, 184, 247
BstKTI	GATC	4 cut(s)	631, 1061, 1175, 1315
BstMAI	GTCTC	2 cut(s)	1060, 1123
BstMBI	GATC	4 cut(s)	628, 1058, 1172, 1312
BstNI	CCWGG	3 cut(s)	682, 699, 986
BstPAI	GACNNNNGTC	1 cut(s)	1290
BstPI	GGTNACC	1 cut(s)	224
BstSCI	CCNGG	6 cut(s)	271, 422, 680, 697, 790, 984
BstSFI	CTRYAG	3 cut(s)	624, 672, 716
BstUI	CGCG	2 cut(s)	182, 194
BstV1I	GCAGC	4 cut(s)	470, 730, 958, 1253
BstX2I	RGATCY	2 cut(s)	1058, 1172
BstXI	CCANNNNNNTGG	1 cut(s)	1118
BstYI	RGATCY	2 cut(s)	1058, 1172
BsuI	GTATCC	2 cut(s)	412, 1037
BsuRI	GGCC	2 cut(s)	564, 685
BtgI	CCRYGG	1 cut(s)	1137
BtrI	CACGTC	1 cut(s)	312
BtsCI	GGATG	3 cut(s)	203, 677, 1210
BtsI	GCAGTG	2 cut(s)	713, 736
BtsIMutI	CAGTG	2 cut(s)	713, 736
BveI	ACCTGC	1 cut(s)	631
Cac8I	GCNNGC	3 cut(s)	182, 192, 599
CaiI	CAGNNNCTG	1 cut(s)	761
CciI	TCATGA	1 cut(s)	1198
CfoI	GCGC	7 cut(s)	19, 70, 86, 110, 182, 184, 247
Cfr10I	RCCGGY	2 cut(s)	64, 560
Cfr13I	GGNCC	4 cut(s)	276, 563, 587, 1146
Csp6I	GTAC	1 cut(s)	1013
CviAII	CATG	6 cut(s)	635, 1051, 1118, 1138, 1199, 1325
CviQI	GTAC	1 cut(s)	1013
DdeI	CTNAG	2 cut(s)	473, 651
DinI	GGCGCC	2 cut(s)	18, 69
DpnI	GATC	4 cut(s)	630, 1060, 1174, 1314
DpnII	GATC	4 cut(s)	628, 1058, 1172, 1312
DrdI	GACNNNNNNGTC	1 cut(s)	382
DriI	GACNNNNNGTC	1 cut(s)	1073
DseDI	GACNNNNNNGTC	1 cut(s)	382
Eam1104I	CTCTTC	2 cut(s)	500, 511
Eam1105I	GACNNNNNGTC	1 cut(s)	1073
EarI	CTCTTC	2 cut(s)	500, 511
EciI	GGCGGA	4 cut(s)	81, 105, 345, 534
Eco130I	CCWWGG	3 cut(s)	801, 877, 1137
Eco24I	GRGCYC	1 cut(s)	353
Eco31I	GGTCTC	1 cut(s)	1123
Eco32I	GATATC	1 cut(s)	1234
Eco47I	GGWCC	3 cut(s)	276, 587, 1146
Eco47III	AGCGCT	2 cut(s)	85, 109
Eco57I	CTGAAG	1 cut(s)	971
Eco88I	CYCGRG	1 cut(s)	1335
Eco91I	GGTNACC	1 cut(s)	224
EcoNI	CCTNNNNNAGG	1 cut(s)	881
EcoO109I	RGGNCCY	1 cut(s)	276
EcoO65I	GGTNACC	1 cut(s)	224
EcoRI	GAATTC	1 cut(s)	980
EcoRII	CCWGG	3 cut(s)	680, 697, 984
EcoRV	GATATC	1 cut(s)	1234
EcoT14I	CCWWGG	3 cut(s)	801, 877, 1137
EcoT38I	GRGCYC	1 cut(s)	353
EgeI	GGCGCC	2 cut(s)	18, 69
EheI	GGCGCC	2 cut(s)	18, 69
ErhI	CCWWGG	3 cut(s)	801, 877, 1137
FaeI	CATG	6 cut(s)	638, 1054, 1121, 1141, 1202, 1328
FalI	AAGNNNNNCTT	2 cut(s)	900, 932
FatI	CATG	6 cut(s)	634, 1050, 1117, 1137, 1198, 1324
FauI	CCCGC	6 cut(s)	64, 136, 160, 199, 216, 606
FblI	GTMKAC	1 cut(s)	374
FokI	GGATG	3 cut(s)	190, 664, 1197
FriOI	GRGCYC	1 cut(s)	353
FspBI	CTAG	1 cut(s)	464
GlaI	GCGC	7 cut(s)	18, 69, 85, 109, 181, 183, 246
GsaI	CCCAGC	3 cut(s)	180, 245, 260
HaeII	RGCGCY	5 cut(s)	20, 71, 87, 111, 248
HaeIII	GGCC	2 cut(s)	564, 685
HapII	CCGG	7 cut(s)	14, 65, 200, 272, 423, 561, 791
HhaI	GCGC	7 cut(s)	19, 70, 86, 110, 182, 184, 247
Hin1I	GRCGYC	2 cut(s)	17, 68
Hin1II	CATG	6 cut(s)	638, 1054, 1121, 1141, 1202, 1328
Hin6I	GCGC	7 cut(s)	17, 68, 84, 108, 180, 182, 245
HinP1I	GCGC	7 cut(s)	17, 68, 84, 108, 180, 182, 245
HincII	GTYRAC	1 cut(s)	375
HindII	GTYRAC	1 cut(s)	375
HindIII	AAGCTT	1 cut(s)	1301
HinfI	GANTC	4 cut(s)	196, 460, 807, 866
HpaII	CCGG	7 cut(s)	14, 65, 200, 272, 423, 561, 791
HphI	GGTGA	1 cut(s)	228
Hpy166II	GTNNAC	8 cut(s)	6, 297, 375, 590, 825, 904, 1013, 1149
Hpy188I	TCNGA	5 cut(s)	264, 763, 865, 1063, 1312
Hpy188III	TCNNGA	3 cut(s)	411, 1199, 1229
Hpy8I	GTNNAC	8 cut(s)	6, 297, 375, 590, 825, 904, 1013, 1149
Hpy99I	CGWCG	8 cut(s)	172, 316, 376, 388, 397, 400, 403, 406
HpyAV	CCTTC	4 cut(s)	243, 848, 922, 946
HpyCH4III	ACNGT	2 cut(s)	307, 384
HpyCH4IV	ACGT	3 cut(s)	311, 821, 976
HpyCH4V	TGCA	9 cut(s)	486, 626, 665, 718, 770, 1050, 1178, 1275, 1283
HpyF3I	CTNAG	2 cut(s)	473, 651
HpySE526I	ACGT	3 cut(s)	311, 821, 976
Hsp92I	GRCGYC	2 cut(s)	17, 68
Hsp92II	CATG	6 cut(s)	638, 1054, 1121, 1141, 1202, 1328
HspAI	GCGC	7 cut(s)	17, 68, 84, 108, 180, 182, 245
KasI	GGCGCC	2 cut(s)	16, 67
Kzo9I	GATC	4 cut(s)	628, 1058, 1172, 1312
LmnI	GCTCC	5 cut(s)	91, 115, 265, 500, 523
Lsp1109I	GCAGC	4 cut(s)	470, 730, 958, 1253
LweI	GCATC	3 cut(s)	212, 610, 686
MaeI	CTAG	1 cut(s)	464
MaeII	ACGT	3 cut(s)	311, 821, 976
MaeIII	GTNAC	2 cut(s)	224, 307
MalI	GATC	4 cut(s)	630, 1060, 1174, 1314
MboI	GATC	4 cut(s)	628, 1058, 1172, 1312
MboII	GAAGA	7 cut(s)	514, 517, 525, 528, 908, 1187, 1299
MflI	RGATCY	2 cut(s)	1058, 1172
MhlI	GDGCHC	2 cut(s)	353, 474
MluCI	AATT	6 cut(s)	438, 576, 748, 980, 999, 1082
Mly113I	GGCGCC	2 cut(s)	17, 68
MlyI	GAGTC	1 cut(s)	190
MmeI	TCCRAC	3 cut(s)	287, 581, 1021
MroXI	GAANNNNTTC	1 cut(s)	1086
MseI	TTAA	1 cut(s)	1317
MslI	CAYNNNNRTG	2 cut(s)	1116, 1337
MspA1I	CMGCKG	1 cut(s)	949
MspI	CCGG	7 cut(s)	14, 65, 200, 272, 423, 561, 791
MspR9I	CCNGG	6 cut(s)	273, 424, 682, 699, 792, 986
MvaI	CCWGG	3 cut(s)	682, 699, 986
MvnI	CGCG	2 cut(s)	182, 194
NarI	GGCGCC	2 cut(s)	17, 68
NciI	CCSGG	3 cut(s)	273, 424, 792
NcoI	CCATGG	1 cut(s)	1137
NdeII	GATC	4 cut(s)	628, 1058, 1172, 1312
NlaIII	CATG	6 cut(s)	638, 1054, 1121, 1141, 1202, 1328
NlaIV	GGNNCC	6 cut(s)	18, 69, 277, 525, 745, 1060
NmuCI	GTSAC	1 cut(s)	307
OliI	CACNNNNGTG	1 cut(s)	1337
PagI	TCATGA	1 cut(s)	1198
PaqCI	CACCTGC	1 cut(s)	631
PauI	GCGCGC	1 cut(s)	180
PcsI	WCGNNNNNNNCGW	4 cut(s)	338, 380, 392, 401
PdmI	GAANNNNTTC	1 cut(s)	1086
PfeI	GAWTC	3 cut(s)	460, 807, 866
PflMI	CCANNNNNTGG	1 cut(s)	1143
PleI	GAGTC	1 cut(s)	190
PluTI	GGCGCC	2 cut(s)	20, 71
PpsI	GAGTC	1 cut(s)	190
PpuMI	RGGWCCY	1 cut(s)	276
PshAI	GACNNNNGTC	1 cut(s)	1290
Psp5II	RGGWCCY	1 cut(s)	276
Psp6I	CCWGG	3 cut(s)	680, 697, 984
PspEI	GGTNACC	1 cut(s)	224
PspFI	CCCAGC	3 cut(s)	176, 241, 256
PspGI	CCWGG	3 cut(s)	680, 697, 984
PspN4I	GGNNCC	6 cut(s)	18, 69, 277, 525, 745, 1060
PspPI	GGNCC	4 cut(s)	276, 563, 587, 1146
PspPPI	RGGWCCY	1 cut(s)	276
PstI	CTGCAG	2 cut(s)	628, 720
PstNI	CAGNNNCTG	1 cut(s)	761
PsuI	RGATCY	2 cut(s)	1058, 1172
PteI	GCGCGC	1 cut(s)	180
PvuII	CAGCTG	1 cut(s)	949
RsaI	GTAC	1 cut(s)	1014
RsaNI	GTAC	1 cut(s)	1013
RseI	CAYNNNNRTG	2 cut(s)	1116, 1337
SalI	GTCGAC	1 cut(s)	373
SaqAI	TTAA	1 cut(s)	1317
Sau3AI	GATC	4 cut(s)	628, 1058, 1172, 1312
Sau96I	GGNCC	4 cut(s)	276, 563, 587, 1146
SchI	GAGTC	1 cut(s)	190
ScrFI	CCNGG	6 cut(s)	273, 424, 682, 699, 792, 986
SduI	GDGCHC	2 cut(s)	353, 474
SfaNI	GCATC	3 cut(s)	212, 610, 686
SfcI	CTRYAG	3 cut(s)	624, 672, 716
SfoI	GGCGCC	2 cut(s)	18, 69
SgrAI	CRCCGGYG	1 cut(s)	64
SinI	GGWCC	3 cut(s)	276, 587, 1146
SmiMI	CAYNNNNRTG	2 cut(s)	1116, 1337
Sse9I	AATT	6 cut(s)	438, 576, 748, 980, 999, 1082
SspDI	GGCGCC	2 cut(s)	16, 67
SspMI	CTAG	1 cut(s)	464
StyD4I	CCNGG	6 cut(s)	271, 422, 680, 697, 790, 984
StyI	CCWWGG	3 cut(s)	801, 877, 1137
TaaI	ACNGT	2 cut(s)	307, 384
TaiI	ACGT	3 cut(s)	314, 824, 979
TaqI	TCGA	1 cut(s)	374
TasI	AATT	6 cut(s)	438, 576, 748, 980, 999, 1082
TatI	WGTACW	1 cut(s)	1012
TfiI	GAWTC	3 cut(s)	460, 807, 866
Tru1I	TTAA	1 cut(s)	1317
Tru9I	TTAA	1 cut(s)	1317
TscAI	CASTG	2 cut(s)	720, 736
TseFI	GTSAC	1 cut(s)	307
TseI	GCWGC	4 cut(s)	483, 718, 946, 1241
Tsp45I	GTSAC	1 cut(s)	307
TspDTI	ATGAA	3 cut(s)	1095, 1187, 1214
TspGWI	ACGGA	1 cut(s)	866
TspRI	CASTG	2 cut(s)	720, 736
Van91I	CCANNNNNTGG	1 cut(s)	1143
VpaK11BI	GGWCC	3 cut(s)	276, 587, 1146
XagI	CCTNNNNNAGG	1 cut(s)	881
XapI	RAATTY	3 cut(s)	576, 980, 1082
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1339
XmiI	GTMKAC	1 cut(s)	374
XmnI	GAANNNNTTC	1 cut(s)	1086
XspI	CTAG	1 cut(s)	464

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.