Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0001011

Physical Location & Seq

Genomic Coordinates Reverse (-)

4942585 .. 4947436

Gene Structure 4852 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G068800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGTCGGCGCCGTCTCCGGAGACCAACTCTACGTCACCTCTTCCTCCGGGGACTAACGCCACGTCACCTCCCCCTCCGGCGACCAACGCCCCAGAGCCTACTACTCCTTCTCCTCCGGCCAACGCCACAACACCTCCCCCTCCCCCTCCCACAGCGCCGACCGAGTCTCCGCCGCCGCCGCCGTCGCCGGGGAGTGGGACCTTGCCGACGAAAACGAATGTTGCGATTATAGTCGGGGTTGGGATTGGAGGGTTCAGTATGCTAGTTTTCGTGTCGATTTTCTTCTTTTTCTACAGGAGACGGAAGAGGCGGCAGCAAGGGAGGCCATATGAGTATCCACACGAACCTAAAAATGATCAATTTGGTGGCCAACCTCAGCATTTGCAACAGAATTATACTCCTCCACTGGCAGACAAAGTAGAAATATATTCAAAGCCTGCTCTTTTTCCGGTACCATCTTCAACCAGTAGCAGCTTGAGCTCTGAGAAACCACCCTCAGGACAATCTCCGGGCATTGCCTTTGGATCATCGCAAATCACATTTACATATGAAGAGTTACTGATGGCAACAAATGGTTTCTCCAATGCCAATCTCCTTGGTCAAGGAGGATTTGGTTATGTTCATAAAGGAGTCCTTCCAAATGGGAAAGTGGTTGCAATTAAGCAGCTGAAAGCTGGGAGTGGACAAGGGGAGCGTGAATTCCAGGCAGAGATCGAGGTCATTAGTCGCGTCCATCACAGACATCTTGTTTCACTGGTTGGATACTGCATTAGCGGGGCCCAAAGGATGCTTATTTATGAGTTTGTTCCAAACGATACCTTGGAATTTCATCTGCATGGAAAGGGGAGGCCAACTATGAATTGGCCAACAAGATTGAAAATTGCCCTAGGCTCTGCAAAAGGATTGGCATATCTCCATGAGGACTGTCAGCCCAAGATCATACACCGTGACATCAAGGGATCTAATATTCTTCTTGACTATAACTTTGAGGCAAAGGTTGCAGATTTTGGACTTGCCAAGGTTTCTTTAGATACAGATACTCATGTCTCCACTAGGGTGATGGGAACTTTTGGTTACTTAGCTCCTGAATATGCATCTAGTGGAAAGCTCACCGAGAAGTCAGATGTCTTCTCATTTGGGGTTGTTCTATTGGAGTTGATAACTGGACGCCAACCAATTGATAAAACTCAATCTTTCACTGATGATAGCATGGTTGAGTGGGCAAGGCCTATGCTTGCACAAGCATTGGAAACAGGCAACTTTGATGCTATTGTTGATGTAAGGTTGCAGAATGACTACAACACTGGTGAAATGGCCTGTATGCTTGCTTGCGCTGCTGCTTGCGTACGTCATTCCGGCCGACGTCGGCCACGAATGAGCCAGGTAGTTCGAGCTTTGGAAGGAAATCTTTCTCCAGATGAGTTAAATGAGGGAGTTATACCGGGTCACAGTACAATATACAGTTCCTACGGAAGCTCAGACTACAACACTAGTGAATACAAGGAAGACTTGCAGAAATTCAGAAAACTAGCATTAGAAAGCCAAGAGCAAGAGCAAGGAACTAGTGGGATTAGTGGGCCTAGCAGTGAGTTTGATCAGCACCAATCTGCCTCTAGTGGTGAAGGCCAACAAACCTCCCAAGAGATTGAACTTGGGAAAACGAAGAAAAACACCCATAATTTGAGTGAAAGCTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 ko05169 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164 map05169

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

566

Amino Acids

61.26

Weight (kDa)

6.23

Isoelectric Point (pI)

55.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001011)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24540 AT3G24550
fragaria_vesca	FvH4_1g04680 FvH4_1g04680 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540
malus_domestica	MD02G1045800.v1.1 MD15G1184000.v1.1 MD15G1318900.v1.1 MD17G1193400.v1.1
prunus_persica	Prupe.3G068800_v2.0.a1 Prupe.7G232200_v2.0.a1
pyrus_communis	pycom02g03820 pycom09g12790 pycom15g16560 pycom17g19940
rosa_chinensis	RchiOBHm_Chr2g0090291 RchiOBHm_Chr2g0138371 RchiOBHm_Chr2g0138381 RchiOBHm_Chr2g0138481 RchiOBHm_Chr2g0138511 RchiOBHm_Chr2g0138521 RchiOBHm_Chr2g0138601 RchiOBHm_Chr6g0297471
rosa_laevigata	RLG00000016095 RLG00000019740 RLG00000019744 RLG00000019747
rosa_multiflora	Rmu_co8232347.1_g000001 Rmu_co8362561.1_g000001 Rmu_sc0000436.1_g000004 Rmu_sc0001534.1_g000011 Rmu_sc0006235.1_g000002 Rmu_sc0008467.1_g000011 Rmu_sc0012206.1_g000004
rosa_roxburghii	Rroxscaffold_2G00106070 Rroxscaffold_2G00106140 Rroxscaffold_2G00106150 Rroxscaffold_2G00106280 Rroxscaffold_2G00151310
rosa_rugosa	Rorug02G0006300 Rorug02G0351700 Rorug06G0272400
rosa_samantha	Rh2AG052200 Rh2AG400100 Rh2AG400200 Rh2AG400800 Rh2CG386300 Rh2DG052100 Rh2DG419800 Rh2DG419900 Rh2DG420100 Rh2DG420600 Rh2DG421200
rosa_wichuraiana	Rw2G004470 Rw2G032550 Rw2G032580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1366
Acc65I	GGTACC	1 cut(s)	451
AccB1I	GGYRCC	2 cut(s)	7, 451
AccII	CGCG	1 cut(s)	729
AccIII	TCCGGA	1 cut(s)	16
AciI	CCGC	6 cut(s)	170, 173, 176, 179, 310, 774
AclWI	GGATC	2 cut(s)	532, 967
AcoI	YGGCCR	5 cut(s)	117, 367, 863, 1357, 1367
AcsI	RAATTY	3 cut(s)	698, 824, 1517
AcyI	GRCGYC	3 cut(s)	8, 1168, 1363
AfaI	GTAC	3 cut(s)	453, 1347, 1453
AfiI	CCNNNNNNNGG	3 cut(s)	188, 194, 497
AgsI	TTSAA	4 cut(s)	432, 462, 877, 1649
AhlI	ACTAGT	2 cut(s)	1490, 1562
AjiI	CACGTC	1 cut(s)	63
AjnI	CCWGG	2 cut(s)	702, 1380
AleI	CACNNNNGTG	1 cut(s)	1055
AluBI	AGCT	9 cut(s)	474, 480, 667, 674, 1082, 1108, 1394, 1476, 1692
AluI	AGCT	9 cut(s)	474, 480, 667, 674, 1082, 1108, 1394, 1476, 1692
Alw21I	GWGCWC	1 cut(s)	482
Alw26I	GTCTC	5 cut(s)	14, 18, 171, 292, 1051
AlwI	GGATC	2 cut(s)	532, 967
Aor13HI	TCCGGA	1 cut(s)	16
ApaI	GGGCCC	1 cut(s)	781
ApeKI	GCWGC	5 cut(s)	313, 471, 664, 1334, 1337
ApoI	RAATTY	3 cut(s)	698, 824, 1517
ArsI	GACNNNNNNTTYG	2 cut(s)	968, 1000
Asp700I	GAANNNNTTC	1 cut(s)	1408
Asp718I	GGTACC	1 cut(s)	451
AspA2I	CCTAGG	1 cut(s)	886
AspLEI	GCGC	3 cut(s)	10, 157, 1334
AspS9I	GGNCC	4 cut(s)	198, 777, 778, 1577
AsuC2I	CCSGG	4 cut(s)	48, 189, 510, 1443
AsuHPI	GGTGA	6 cut(s)	27, 57, 1069, 1102, 1319, 1631
AvaII	GGWCC	1 cut(s)	198
AvrII	CCTAGG	1 cut(s)	886
AxyI	CCTNAGG	1 cut(s)	496
BaeGI	GKGCMC	1 cut(s)	781
BaeI	ACNNNNGTAYC	2 cut(s)	1029, 1062
BalI	TGGCCA	2 cut(s)	369, 865
BanI	GGYRCC	2 cut(s)	7, 451
BanII	GRGCYC	2 cut(s)	482, 781
BbsI	GAAGAC	2 cut(s)	1120, 1512
Bbv12I	GWGCWC	1 cut(s)	482
BbvCI	CCTCAGC	1 cut(s)	375
BbvI	GCAGC	5 cut(s)	325, 483, 676, 1321, 1324
BccI	CCATC	4 cut(s)	463, 556, 741, 1054
BceAI	ACGGC	1 cut(s)	166
BciT130I	CCWGG	2 cut(s)	704, 1382
BciVI	GTATCC	2 cut(s)	345, 755
BclI	TGATCA	2 cut(s)	355, 1594
BcnI	CCSGG	4 cut(s)	48, 189, 510, 1443
BcoDI	GTCTC	5 cut(s)	14, 18, 171, 292, 1051
BcuI	ACTAGT	2 cut(s)	1490, 1562
BfaI	CTAG	9 cut(s)	263, 887, 1053, 1098, 1491, 1529, 1563, 1581, 1614
BfmI	CTRYAG	1 cut(s)	292
BfoI	RGCGCY	2 cut(s)	11, 158
BfuI	GTATCC	2 cut(s)	345, 755
BisI	GCNGC	9 cut(s)	173, 176, 179, 311, 314, 472, 665, 1335, 1338
BlnI	CCTAGG	1 cut(s)	886
BlsI	GCNGC	9 cut(s)	174, 177, 180, 312, 315, 473, 666, 1336, 1339
Bme1390I	CCNGG	6 cut(s)	48, 189, 510, 704, 1382, 1443
Bme18I	GGWCC	1 cut(s)	198
BmgBI	CACGTC	1 cut(s)	63
BmgT120I	GGNCC	4 cut(s)	198, 777, 778, 1577
BmiI	GGNNCC	5 cut(s)	9, 199, 453, 778, 779
BmrFI	CCNGG	6 cut(s)	48, 189, 510, 704, 1382, 1443
BmsI	GCATC	3 cut(s)	777, 1103, 1255
BpiI	GAAGAC	2 cut(s)	1120, 1512
BplI	GAGNNNNNCTC	2 cut(s)	11, 43
BpmI	CTGGAG	1 cut(s)	1398
Bpu10I	CCTNAGC	1 cut(s)	375
BpuEI	CTTGAG	1 cut(s)	496
BpuMI	CCSGG	4 cut(s)	48, 189, 510, 1443
BsaHI	GRCGYC	3 cut(s)	8, 1168, 1363
BsaI	GGTCTC	1 cut(s)	14
BsaJI	CCNNGG	6 cut(s)	47, 188, 595, 819, 886, 1017
BsaWI	WCCGGW	2 cut(s)	16, 448
BsaXI	ACNNNNNCTCC	8 cut(s)	52, 82, 94, 118, 124, 148, 151, 181
Bsc4I	CCNNNNNNNGG	3 cut(s)	188, 194, 497
Bse1I	ACTGG	5 cut(s)	411, 465, 759, 1168, 1309
Bse21I	CCTNAGG	1 cut(s)	496
Bse3DI	GCAATG	1 cut(s)	513
BseAI	TCCGGA	1 cut(s)	16
BseBI	CCWGG	2 cut(s)	704, 1382
BseDI	CCNNGG	6 cut(s)	47, 188, 595, 819, 886, 1017
BseGI	GGATG	1 cut(s)	792
BseLI	CCNNNNNNNGG	3 cut(s)	188, 194, 497
BseMI	GCAATG	1 cut(s)	513
BseMII	CTCAG	4 cut(s)	389, 474, 510, 1491
BseNI	ACTGG	5 cut(s)	411, 465, 759, 1168, 1309
BseRI	GAGGAG	2 cut(s)	102, 390
BseSI	GKGCMC	1 cut(s)	781
BseX3I	CGGCCG	1 cut(s)	1357
BseXI	GCAGC	5 cut(s)	325, 483, 676, 1321, 1324
BseYI	CCCAGC	1 cut(s)	674
Bsh1236I	CGCG	1 cut(s)	729
Bsh1285I	CGRYCG	2 cut(s)	162, 1360
BshNI	GGYRCC	2 cut(s)	7, 451
BsiEI	CGRYCG	2 cut(s)	162, 1360
BsiHKAI	GWGCWC	1 cut(s)	482
BsiSI	CCGG	9 cut(s)	17, 47, 77, 116, 188, 449, 509, 1356, 1442
BsiWI	CGTACG	1 cut(s)	1345
BslFI	GGGAC	2 cut(s)	64, 211
BslI	CCNNNNNNNGG	3 cut(s)	188, 194, 497
BsmAI	GTCTC	5 cut(s)	14, 18, 171, 292, 1051
BsmBI	CGTCTC	2 cut(s)	18, 292
BsmFI	GGGAC	2 cut(s)	64, 211
Bso31I	GGTCTC	1 cut(s)	14
Bsp120I	GGGCCC	1 cut(s)	777
Bsp1286I	GDGCHC	2 cut(s)	482, 781
Bsp13I	TCCGGA	1 cut(s)	16
Bsp143I	GATC	6 cut(s)	355, 524, 711, 936, 959, 1594
BspACI	CCGC	6 cut(s)	170, 173, 176, 179, 310, 774
BspCNI	CTCAG	4 cut(s)	388, 475, 509, 1490
BspEI	TCCGGA	1 cut(s)	16
BspFNI	CGCG	1 cut(s)	729
BspLI	GGNNCC	5 cut(s)	9, 199, 453, 778, 779
BspPI	GGATC	2 cut(s)	532, 967
BspT107I	GGYRCC	2 cut(s)	7, 451
BspTNI	GGTCTC	1 cut(s)	14
BsrDI	GCAATG	1 cut(s)	513
BsrI	ACTGG	5 cut(s)	411, 465, 759, 1168, 1309
BssECI	CCNNGG	6 cut(s)	47, 188, 595, 819, 886, 1017
BssMI	GATC	6 cut(s)	355, 524, 711, 936, 959, 1594
BssNI	GRCGYC	3 cut(s)	8, 1168, 1363
BssT1I	CCWWGG	4 cut(s)	595, 819, 886, 1017
Bst2UI	CCWGG	2 cut(s)	704, 1382
Bst4CI	ACNGT	4 cut(s)	926, 947, 1451, 1463
Bst6I	CTCTTC	3 cut(s)	45, 299, 546
BstACI	GRCGYC	3 cut(s)	8, 1168, 1363
BstAPI	GCANNNNNTGC	1 cut(s)	998
BstC8I	GCNNGC	5 cut(s)	438, 1236, 1326, 1330, 1342
BstDEI	CTNAG	5 cut(s)	375, 483, 496, 1078, 1477
BstF5I	GGATG	1 cut(s)	792
BstFNI	CGCG	1 cut(s)	729
BstH2I	RGCGCY	2 cut(s)	11, 158
BstHHI	GCGC	3 cut(s)	10, 157, 1334
BstKTI	GATC	6 cut(s)	358, 527, 714, 939, 962, 1597
BstMAI	GTCTC	5 cut(s)	14, 18, 171, 292, 1051
BstMBI	GATC	6 cut(s)	355, 524, 711, 936, 959, 1594
BstMCI	CGRYCG	2 cut(s)	162, 1360
BstMWI	GCNNNNNNNGC	7 cut(s)	86, 178, 184, 322, 477, 998, 1334
BstNI	CCWGG	2 cut(s)	704, 1382
BstSCI	CCNGG	6 cut(s)	46, 187, 508, 702, 1380, 1441
BstSFI	CTRYAG	1 cut(s)	292
BstSLI	GKGCMC	1 cut(s)	781
BstUI	CGCG	1 cut(s)	729
BstV1I	GCAGC	5 cut(s)	325, 483, 676, 1321, 1324
BstV2I	GAAGAC	2 cut(s)	1120, 1512
BstX2I	RGATCY	1 cut(s)	959
BstYI	RGATCY	1 cut(s)	959
BstZI	CGGCCG	1 cut(s)	1357
Bsu36I	CCTNAGG	1 cut(s)	496
BsuI	GTATCC	2 cut(s)	345, 755
BtgZI	GCGATG	1 cut(s)	513
BtrI	CACGTC	1 cut(s)	63
BtsCI	GGATG	1 cut(s)	792
BtsI	GCAGTG	1 cut(s)	1591
BtsIMutI	CAGTG	5 cut(s)	404, 752, 1197, 1302, 1591
Cac8I	GCNNGC	5 cut(s)	438, 1236, 1326, 1330, 1342
CfoI	GCGC	3 cut(s)	10, 157, 1334
Cfr13I	GGNCC	4 cut(s)	198, 777, 778, 1577
CseI	GACGC	2 cut(s)	718, 1176
Csp6I	GTAC	3 cut(s)	452, 1346, 1452
CviAII	CATG	4 cut(s)	836, 917, 1043, 1210
CviQI	GTAC	3 cut(s)	452, 1346, 1452
DdeI	CTNAG	5 cut(s)	375, 483, 496, 1078, 1477
DinI	GGCGCC	1 cut(s)	9
DpnI	GATC	6 cut(s)	357, 526, 713, 938, 961, 1596
DpnII	GATC	6 cut(s)	355, 524, 711, 936, 959, 1594
EaeI	YGGCCR	5 cut(s)	117, 367, 863, 1357, 1367
EagI	CGGCCG	1 cut(s)	1357
Eam1104I	CTCTTC	3 cut(s)	45, 299, 546
EarI	CTCTTC	3 cut(s)	45, 299, 546
EciI	GGCGGA	1 cut(s)	159
Ecl136II	GAGCTC	1 cut(s)	480
EclXI	CGGCCG	1 cut(s)	1357
Eco130I	CCWWGG	4 cut(s)	595, 819, 886, 1017
Eco147I	AGGCCT	1 cut(s)	1228
Eco24I	GRGCYC	2 cut(s)	482, 781
Eco31I	GGTCTC	1 cut(s)	14
Eco47I	GGWCC	1 cut(s)	198
Eco52I	CGGCCG	1 cut(s)	1357
Eco53kI	GAGCTC	1 cut(s)	480
Eco81I	CCTNAGG	1 cut(s)	496
EcoICRI	GAGCTC	1 cut(s)	480
EcoO109I	RGGNCCY	2 cut(s)	198, 777
EcoRI	GAATTC	1 cut(s)	698
EcoRII	CCWGG	2 cut(s)	702, 1380
EcoT14I	CCWWGG	4 cut(s)	595, 819, 886, 1017
EcoT22I	ATGCAT	1 cut(s)	1096
EcoT38I	GRGCYC	2 cut(s)	482, 781
EgeI	GGCGCC	1 cut(s)	9
EheI	GGCGCC	1 cut(s)	9
ErhI	CCWWGG	4 cut(s)	595, 819, 886, 1017
Esp3I	CGTCTC	2 cut(s)	18, 292
FaeI	CATG	4 cut(s)	839, 920, 1046, 1213
FalI	AAGNNNNNCTT	6 cut(s)	618, 650, 1392, 1424, 1493, 1525
FaqI	GGGAC	2 cut(s)	64, 211
FatI	CATG	4 cut(s)	835, 916, 1042, 1209
FauI	CCCGC	1 cut(s)	767
FauNDI	CATATG	2 cut(s)	328, 547
FbaI	TGATCA	2 cut(s)	355, 1594
Fnu4HI	GCNGC	9 cut(s)	173, 176, 179, 311, 314, 472, 665, 1335, 1338
FokI	GGATG	1 cut(s)	799
FriOI	GRGCYC	2 cut(s)	482, 781
Fsp4HI	GCNGC	9 cut(s)	173, 176, 179, 311, 314, 472, 665, 1335, 1338
FspBI	CTAG	9 cut(s)	263, 887, 1053, 1098, 1491, 1529, 1563, 1581, 1614
GlaI	GCGC	3 cut(s)	9, 156, 1333
GluI	GCNGC	9 cut(s)	173, 176, 179, 311, 314, 472, 665, 1335, 1338
GsaI	CCCAGC	1 cut(s)	678
GsuI	CTGGAG	1 cut(s)	1398
HaeII	RGCGCY	2 cut(s)	11, 158
HapII	CCGG	9 cut(s)	17, 47, 77, 116, 188, 449, 509, 1356, 1442
HgaI	GACGC	2 cut(s)	718, 1176
HhaI	GCGC	3 cut(s)	10, 157, 1334
Hin1I	GRCGYC	3 cut(s)	8, 1168, 1363
Hin1II	CATG	4 cut(s)	839, 920, 1046, 1213
Hin6I	GCGC	3 cut(s)	8, 155, 1332
HinP1I	GCGC	3 cut(s)	8, 155, 1332
HinfI	GANTC	2 cut(s)	164, 630
HpaII	CCGG	9 cut(s)	17, 47, 77, 116, 188, 449, 509, 1356, 1442
HphI	GGTGA	6 cut(s)	27, 57, 1069, 1102, 1319, 1631
Hpy166II	GTNNAC	1 cut(s)	683
Hpy188I	TCNGA	4 cut(s)	484, 1123, 1480, 1523
Hpy188III	TCNNGA	6 cut(s)	17, 498, 974, 1085, 1415, 1695
Hpy8I	GTNNAC	1 cut(s)	683
Hpy99I	CGWCG	4 cut(s)	187, 211, 1365, 1368
HpyAV	CCTTC	4 cut(s)	117, 644, 1394, 1616
HpyCH4III	ACNGT	4 cut(s)	926, 947, 1451, 1463
HpyCH4IV	ACGT	4 cut(s)	32, 62, 1348, 1363
HpyF10VI	GCNNNNNNNGC	7 cut(s)	86, 178, 184, 322, 477, 998, 1334
HpyF3I	CTNAG	5 cut(s)	375, 483, 496, 1078, 1477
HpySE526I	ACGT	4 cut(s)	32, 62, 1348, 1363
Hsp92I	GRCGYC	3 cut(s)	8, 1168, 1363
Hsp92II	CATG	4 cut(s)	839, 920, 1046, 1213
HspAI	GCGC	3 cut(s)	8, 155, 1332
KasI	GGCGCC	1 cut(s)	7
Kpn2I	TCCGGA	1 cut(s)	16
KpnI	GGTACC	1 cut(s)	455
Ksp22I	TGATCA	2 cut(s)	355, 1594
Kzo9I	GATC	6 cut(s)	355, 524, 711, 936, 959, 1594
LmnI	GCTCC	2 cut(s)	691, 1087
Lsp1109I	GCAGC	5 cut(s)	325, 483, 676, 1321, 1324
LweI	GCATC	3 cut(s)	777, 1103, 1255
MaeI	CTAG	9 cut(s)	263, 887, 1053, 1098, 1491, 1529, 1563, 1581, 1614
MaeII	ACGT	4 cut(s)	32, 62, 1348, 1363
MaeIII	GTNAC	6 cut(s)	33, 63, 555, 947, 1073, 1445
MalI	GATC	6 cut(s)	357, 526, 713, 938, 961, 1596
MboI	GATC	6 cut(s)	355, 524, 711, 936, 959, 1594
MboII	GAAGA	9 cut(s)	32, 274, 316, 450, 563, 962, 1120, 1517, 1675
MfeI	CAATTG	1 cut(s)	1176
MflI	RGATCY	1 cut(s)	959
MhlI	GDGCHC	2 cut(s)	482, 781
MlsI	TGGCCA	2 cut(s)	369, 865
MluNI	TGGCCA	2 cut(s)	369, 865
Mly113I	GGCGCC	1 cut(s)	8
MlyI	GAGTC	2 cut(s)	173, 639
MmeI	TCCRAC	1 cut(s)	739
Mox20I	TGGCCA	2 cut(s)	369, 865
Mph1103I	ATGCAT	1 cut(s)	1096
MroI	TCCGGA	1 cut(s)	16
MroXI	GAANNNNTTC	1 cut(s)	1408
MscI	TGGCCA	2 cut(s)	369, 865
MseI	TTAA	2 cut(s)	660, 1424
MslI	CAYNNNNRTG	2 cut(s)	834, 1055
Msp20I	TGGCCA	2 cut(s)	369, 865
MspA1I	CMGCKG	1 cut(s)	667
MspI	CCGG	9 cut(s)	17, 47, 77, 116, 188, 449, 509, 1356, 1442
MspR9I	CCNGG	6 cut(s)	48, 189, 510, 704, 1382, 1443
MunI	CAATTG	1 cut(s)	1176
MvaI	CCWGG	2 cut(s)	704, 1382
MvnI	CGCG	1 cut(s)	729
MwoI	GCNNNNNNNGC	7 cut(s)	86, 178, 184, 322, 477, 998, 1334
NarI	GGCGCC	1 cut(s)	8
NciI	CCSGG	4 cut(s)	48, 189, 510, 1443
NdeI	CATATG	2 cut(s)	328, 547
NdeII	GATC	6 cut(s)	355, 524, 711, 936, 959, 1594
NlaIII	CATG	4 cut(s)	839, 920, 1046, 1213
NlaIV	GGNNCC	5 cut(s)	9, 199, 453, 778, 779
NmuCI	GTSAC	4 cut(s)	33, 63, 947, 1445
NsiI	ATGCAT	1 cut(s)	1096
OliI	CACNNNNGTG	1 cut(s)	1055
PceI	AGGCCT	1 cut(s)	1228
PcsI	WCGNNNNNNNCGW	2 cut(s)	221, 1369
PdmI	GAANNNNTTC	1 cut(s)	1408
Pfl23II	CGTACG	1 cut(s)	1345
PflFI	GACNNNGTC	1 cut(s)	163
PkrI	GCNGC	9 cut(s)	174, 177, 180, 312, 315, 473, 666, 1336, 1339
PleI	GAGTC	2 cut(s)	172, 638
PluTI	GGCGCC	1 cut(s)	11
PpsI	GAGTC	2 cut(s)	172, 638
PpuMI	RGGWCCY	1 cut(s)	198
Psp124BI	GAGCTC	1 cut(s)	482
Psp5II	RGGWCCY	1 cut(s)	198
Psp6I	CCWGG	2 cut(s)	702, 1380
PspFI	CCCAGC	1 cut(s)	674
PspGI	CCWGG	2 cut(s)	702, 1380
PspLI	CGTACG	1 cut(s)	1345
PspN4I	GGNNCC	5 cut(s)	9, 199, 453, 778, 779
PspOMI	GGGCCC	1 cut(s)	777
PspPI	GGNCC	4 cut(s)	198, 777, 778, 1577
PspPPI	RGGWCCY	1 cut(s)	198
PsuI	RGATCY	1 cut(s)	959
PsyI	GACNNNGTC	1 cut(s)	163
PvuII	CAGCTG	1 cut(s)	667
RsaI	GTAC	3 cut(s)	453, 1347, 1453
RsaNI	GTAC	3 cut(s)	452, 1346, 1452
RseI	CAYNNNNRTG	2 cut(s)	834, 1055
SacI	GAGCTC	1 cut(s)	482
SaqAI	TTAA	2 cut(s)	660, 1424
SatI	GCNGC	9 cut(s)	173, 176, 179, 311, 314, 472, 665, 1335, 1338
Sau3AI	GATC	6 cut(s)	355, 524, 711, 936, 959, 1594
Sau96I	GGNCC	4 cut(s)	198, 777, 778, 1577
SchI	GAGTC	2 cut(s)	173, 639
ScrFI	CCNGG	6 cut(s)	48, 189, 510, 704, 1382, 1443
SduI	GDGCHC	2 cut(s)	482, 781
SfaNI	GCATC	3 cut(s)	777, 1103, 1255
SfcI	CTRYAG	1 cut(s)	292
SfoI	GGCGCC	1 cut(s)	9
SinI	GGWCC	1 cut(s)	198
SmiMI	CAYNNNNRTG	2 cut(s)	834, 1055
SmlI	CTYRAG	1 cut(s)	475
SmoI	CTYRAG	1 cut(s)	475
SpeI	ACTAGT	2 cut(s)	1490, 1562
SseBI	AGGCCT	1 cut(s)	1228
SsiI	CCGC	6 cut(s)	170, 173, 176, 179, 310, 774
SspDI	GGCGCC	1 cut(s)	7
SspI	AATATT	1 cut(s)	967
SspMI	CTAG	9 cut(s)	263, 887, 1053, 1098, 1491, 1529, 1563, 1581, 1614
SstI	GAGCTC	1 cut(s)	482
StuI	AGGCCT	1 cut(s)	1228
StyD4I	CCNGG	6 cut(s)	46, 187, 508, 702, 1380, 1441
StyI	CCWWGG	4 cut(s)	595, 819, 886, 1017
TaaI	ACNGT	4 cut(s)	926, 947, 1451, 1463
TaiI	ACGT	4 cut(s)	35, 65, 1351, 1366
TaqI	TCGA	3 cut(s)	275, 714, 1390
TaqII	GACCGA	1 cut(s)	176
TatI	WGTACW	1 cut(s)	1451
TauI	GCSGC	4 cut(s)	175, 178, 181, 313
Tru1I	TTAA	2 cut(s)	660, 1424
Tru9I	TTAA	2 cut(s)	660, 1424
TscAI	CASTG	5 cut(s)	411, 759, 1204, 1309, 1591
TseFI	GTSAC	4 cut(s)	33, 63, 947, 1445
TseI	GCWGC	5 cut(s)	313, 471, 664, 1334, 1337
Tsp45I	GTSAC	4 cut(s)	33, 63, 947, 1445
TspDTI	ATGAA	4 cut(s)	564, 611, 818, 872
TspGWI	ACGGA	2 cut(s)	316, 1485
TspRI	CASTG	5 cut(s)	411, 759, 1204, 1309, 1591
Tth111I	GACNNNGTC	1 cut(s)	163
VpaK11BI	GGWCC	1 cut(s)	198
XapI	RAATTY	3 cut(s)	698, 824, 1517
XcmI	CCANNNNNNNNNTGG	2 cut(s)	858, 1057
XmaJI	CCTAGG	1 cut(s)	886
XmnI	GAANNNNTTC	1 cut(s)	1408
XspI	CTAG	9 cut(s)	263, 887, 1053, 1098, 1491, 1529, 1563, 1581, 1614
ZraI	GACGTC	1 cut(s)	1364
Zsp2I	ATGCAT	1 cut(s)	1096

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.