Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006235.1

Orthogroup ID

OG0001011

Physical Location & Seq

Genomic Coordinates Reverse (-)

6589 .. 9877

Gene Structure 3289 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006235.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

atgtccacaactccggcgccctcctcgccgccgaccaacaccacctccccaccacccgccgctccggcgcccacaaccccaagcgctcctccgccaacgaccccaagcgctcctccgccaacaactcccgccactccaccgcccacaactcccgccactccaccgccgacgacctccagcgcgccgccgcccgcgactccggcatccccaccgccgccgtcaggtaccccaccttcaccctcacccccagcgccctccaccccagctccgacatctccggggtcctcgccaccgccgccgtccaccccaaccgtcacatcgccgcctccccccaaaacgccgaccacgaacaagagccctccgccgcccaagtcgccgtcgacaacaccgccgccgtcgtcatcgggattggatactggggttatagtcggaattgctgttggggctgtggcgattctagtggtgctcagtctttgctgcattttttgctccaagaagaagaggagaagaagagaggagcctgtctattatgtgcctccgccgccgcctccaaccggccctaaaggcgaaatttactacggtccaccacgcccgcatcaaaatactcctcctccacctgcagatcatcatgtaatcacaatgcctaagccacctcctgcacaagctgtagcatccaggccaccgccctcgccaggatatacaccgccaccgcagccatacagcagtggaggttctggttccaattattcagggtctgaaactgcactcccaccacctccaccaccggggtattccttgggattctctaaaagcacgtttacttatgacgaactggctttggcaacggaagggttctcggattccaacctccttggacagggtgggtttggatatgttcacaaaggagttcttcccaatgggaaggaagtagcggtcaagcagctgaaggctggaagtgggcaaggggaacgtgaattccaggcagaagttgaaattattagccgtgtacatcacagacatctggtttcgctggttggatactgcatgactggatccgagagactacttgtctatgaatttgttccaaataacactatggagttccacttacatggaaaagggagacctaccatggattggtccacaagactgaaaatcgctttaggatctgcaaaaggactggcatatcttcatgaggattgtcatcctaaaatcattcatcgtgatatcaaggcagctaatatacttttggatttcaagtttgagtgcaaggttgcagactttggtcttgccaagctttcttctgatcttaatactcatgtttccacccgagtgatggggacttttgggtatctagctccagaatatgcttctagtggaaaactcacagacaagtcagatgttttctcattcggggttatgcttttggagttgattactggacgccgcccagttgacgcatctcatacgtacatagaggacagtttggtagagtgggcaaggcccgttctgactcgagctttggaatcagatgactttgatgaactggttgatcctagactgcagaatagttttgaccacaatgagatggctcgcatggttgcttgtgctgcagcttgtgtacgacattctgcaaggcgacgaccacgaatgagtcaggttgtccgtgctttagagggagatgtgtctctgtctgatctgaacgaaggaatcaggcctgggcatagcagtgtctacagttcccatggaagctcagactatgactcaaggccttatgacacaaagcaacgcaatctggatatgataaaccacaggaagatggcattggaaagccaggagtacggcgctagtagcgagtacagtggtggtcgcaccaccagcgagtatggtttgaacccatctggttcaagcagtgaaggccaacgaacccgggaaaccaccagagaaatggagctgggaaagatgaacaagaacaatcgaggttacagtggaagctccgagtattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 ko05169 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164 map05169

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

668

Amino Acids

71.07

Weight (kDa)

8.26

Isoelectric Point (pI)

66.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001011)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24540 AT3G24550
fragaria_vesca	FvH4_1g04680 FvH4_1g04680 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540
malus_domestica	MD02G1045800.v1.1 MD15G1184000.v1.1 MD15G1318900.v1.1 MD17G1193400.v1.1
prunus_persica	Prupe.3G068800_v2.0.a1 Prupe.7G232200_v2.0.a1
pyrus_communis	pycom02g03820 pycom09g12790 pycom15g16560 pycom17g19940
rosa_chinensis	RchiOBHm_Chr2g0090291 RchiOBHm_Chr2g0138371 RchiOBHm_Chr2g0138381 RchiOBHm_Chr2g0138481 RchiOBHm_Chr2g0138511 RchiOBHm_Chr2g0138521 RchiOBHm_Chr2g0138601 RchiOBHm_Chr6g0297471
rosa_laevigata	RLG00000016095 RLG00000019740 RLG00000019744 RLG00000019747
rosa_multiflora	Rmu_co8232347.1_g000001 Rmu_co8362561.1_g000001 Rmu_sc0000436.1_g000004 Rmu_sc0001534.1_g000011 Rmu_sc0006235.1_g000002 Rmu_sc0008467.1_g000011 Rmu_sc0012206.1_g000004
rosa_roxburghii	Rroxscaffold_2G00106070 Rroxscaffold_2G00106140 Rroxscaffold_2G00106150 Rroxscaffold_2G00106280 Rroxscaffold_2G00151310
rosa_rugosa	Rorug02G0006300 Rorug02G0351700 Rorug06G0272400
rosa_samantha	Rh2AG052200 Rh2AG400100 Rh2AG400200 Rh2AG400800 Rh2CG386300 Rh2DG052100 Rh2DG419800 Rh2DG419900 Rh2DG420100 Rh2DG420600 Rh2DG421200
rosa_wichuraiana	Rw2G004470 Rw2G032550 Rw2G032580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	625
Acc36I	ACCTGC	1 cut(s)	625
Acc65I	GGTACC	1 cut(s)	224
AccB1I	GGYRCC	3 cut(s)	16, 67, 224
AccB7I	CCANNNNNTGG	1 cut(s)	1137
AccBSI	CCGCTC	1 cut(s)	62
AccI	GTMKAC	2 cut(s)	380, 1734
AccII	CGCG	2 cut(s)	182, 194
AclWI	GGATC	4 cut(s)	1047, 1060, 1174, 1547
AcsI	RAATTY	3 cut(s)	570, 974, 1076
AcuI	CTGAAG	1 cut(s)	965
AcyI	GRCGYC	3 cut(s)	17, 68, 1444
AfaI	GTAC	6 cut(s)	226, 1008, 1472, 1623, 1841, 1859
AfeI	AGCGCT	2 cut(s)	85, 109
AfiI	CCNNNNNNNGG	7 cut(s)	221, 554, 692, 785, 877, 1137, 1336
AgsI	TTSAA	4 cut(s)	992, 1258, 1894, 1908
AhdI	GACNNNNNGTC	1 cut(s)	1067
AjnI	CCWGG	5 cut(s)	674, 691, 978, 1717, 1833
AjuI	GAANNNNNNNTTGG	2 cut(s)	1808, 1840
AleI	CACNNNNGTG	1 cut(s)	1331
AloI	GAACNNNNNNTCC	2 cut(s)	960, 992
Alw21I	GWGCWC	1 cut(s)	468
Alw26I	GTCTC	3 cut(s)	1054, 1117, 1692
AlwI	GGATC	4 cut(s)	1047, 1060, 1174, 1547
AlwNI	CAGNNNCTG	1 cut(s)	755
Ama87I	CYCGRG	3 cut(s)	1329, 1515, 1929
Aor51HI	AGCGCT	2 cut(s)	85, 109
AoxI	GGCC	6 cut(s)	556, 677, 1502, 1715, 1769, 1918
ApeKI	GCWGC	6 cut(s)	477, 712, 940, 1235, 1610, 1613
ApoI	RAATTY	3 cut(s)	570, 974, 1076
ArsI	GACNNNNNNTTYG	2 cut(s)	1504, 1536
Asp700I	GAANNNNTTC	1 cut(s)	1080
Asp718I	GGTACC	1 cut(s)	224
AspLEI	GCGC	8 cut(s)	19, 70, 86, 110, 182, 184, 253, 1847
AspS9I	GGNCC	5 cut(s)	282, 557, 581, 1140, 1503
AsuC2I	CCSGG	4 cut(s)	279, 786, 1930, 1931
AsuHPI	GGTGA	2 cut(s)	228, 234
AvaI	CYCGRG	3 cut(s)	1329, 1515, 1929
AvaII	GGWCC	3 cut(s)	282, 581, 1140
BaeI	ACNNNNGTAYC	2 cut(s)	405, 438
BamHI	GGATCC	1 cut(s)	1052
BanI	GGYRCC	3 cut(s)	16, 67, 224
BanII	GRGCYC	1 cut(s)	359
BarI	GAAGNNNNNNTAC	2 cut(s)	217, 249
Bbv12I	GWGCWC	1 cut(s)	468
BbvI	GCAGC	6 cut(s)	464, 724, 952, 1247, 1597, 1625
BccI	CCATC	4 cut(s)	1330, 1582, 1813, 1906
BceAI	ACGGC	6 cut(s)	202, 283, 361, 379, 987, 1858
BciT130I	CCWGG	5 cut(s)	676, 693, 980, 1719, 1835
BciVI	GTATCC	2 cut(s)	406, 1031
BcnI	CCSGG	4 cut(s)	279, 786, 1930, 1931
BcoDI	GTCTC	3 cut(s)	1054, 1117, 1692
BfaI	CTAG	5 cut(s)	458, 1355, 1374, 1557, 1848
BfmI	CTRYAG	5 cut(s)	618, 666, 1562, 1611, 1735
BfoI	RGCGCY	6 cut(s)	20, 71, 87, 111, 254, 1848
BfuAI	ACCTGC	1 cut(s)	625
BfuI	GTATCC	2 cut(s)	406, 1031
BglI	GCCNNNNNGGC	2 cut(s)	65, 564
Bme1390I	CCNGG	9 cut(s)	279, 676, 693, 786, 980, 1719, 1835, 1930, 1931
Bme18I	GGWCC	3 cut(s)	282, 581, 1140
BmeRI	GACNNNNNGTC	1 cut(s)	1067
BmeT110I	CYCGRG	3 cut(s)	1329, 1515, 1929
BmgT120I	GGNCC	5 cut(s)	282, 557, 581, 1140, 1503
BmiI	GGNNCC	7 cut(s)	18, 69, 226, 283, 519, 739, 1054
BmrFI	CCNGG	9 cut(s)	279, 676, 693, 786, 980, 1719, 1835, 1930, 1931
BmrI	ACTGGG	2 cut(s)	426, 1445
BmsI	GCATC	4 cut(s)	212, 604, 680, 1469
BmuI	ACTGGG	2 cut(s)	426, 1445
BoxI	GACNNNNGTC	1 cut(s)	1284
BpmI	CTGGAG	2 cut(s)	160, 1344
Bpu10I	CCTNAGC	1 cut(s)	645
BpuEI	CTTGAG	1 cut(s)	1750
BpuMI	CCSGG	4 cut(s)	279, 786, 1930, 1931
BsaAI	YACGTR	1 cut(s)	1470
BsaBI	GATNNNNATC	1 cut(s)	1203
BsaHI	GRCGYC	3 cut(s)	17, 68, 1444
BsaI	GGTCTC	1 cut(s)	1117
BsaJI	CCNNGG	8 cut(s)	278, 785, 795, 871, 1131, 1718, 1744, 1929
BsaXI	ACNNNNNCTCC	6 cut(s)	29, 59, 250, 280, 595, 625
Bsc4I	CCNNNNNNNGG	7 cut(s)	221, 554, 692, 785, 877, 1137, 1336
Bse118I	RCCGGY	1 cut(s)	554
Bse1I	ACTGG	7 cut(s)	421, 837, 1054, 1185, 1444, 1451, 1551
Bse8I	GATNNNNATC	1 cut(s)	1203
BseBI	CCWGG	5 cut(s)	676, 693, 980, 1719, 1835
BseDI	CCNNGG	8 cut(s)	278, 785, 795, 871, 1131, 1718, 1744, 1929
BseGI	GGATG	3 cut(s)	203, 671, 1204
BseJI	GATNNNNATC	1 cut(s)	1203
BseLI	CCNNNNNNNGG	7 cut(s)	221, 554, 692, 785, 877, 1137, 1336
BseMII	CTCAG	2 cut(s)	481, 1767
BseNI	ACTGG	7 cut(s)	421, 837, 1054, 1185, 1444, 1451, 1551
BsePI	GCGCGC	1 cut(s)	180
BseRI	GAGGAG	7 cut(s)	13, 78, 102, 517, 530, 597, 600
BseXI	GCAGC	6 cut(s)	464, 724, 952, 1247, 1597, 1625
BseYI	CCCAGC	3 cut(s)	247, 262, 1954
BsgI	GTGCAG	2 cut(s)	642, 747
Bsh1236I	CGCG	2 cut(s)	182, 194
BshFI	GGCC	6 cut(s)	558, 679, 1504, 1717, 1771, 1920
BshNI	GGYRCC	3 cut(s)	16, 67, 224
BsiHKAI	GWGCWC	1 cut(s)	468
BsiHKCI	CYCGRG	3 cut(s)	1329, 1515, 1929
BsiSI	CCGG	7 cut(s)	14, 65, 200, 278, 555, 785, 1930
BslFI	GGGAC	1 cut(s)	1354
BslI	CCNNNNNNNGG	7 cut(s)	221, 554, 692, 785, 877, 1137, 1336
BsmAI	GTCTC	3 cut(s)	1054, 1117, 1692
BsmFI	GGGAC	1 cut(s)	1354
BsnI	GGCC	6 cut(s)	558, 679, 1504, 1717, 1771, 1920
Bso31I	GGTCTC	1 cut(s)	1117
BsoBI	CYCGRG	3 cut(s)	1329, 1515, 1929
Bsp1286I	GDGCHC	2 cut(s)	359, 468
Bsp1407I	TGTACA	1 cut(s)	1006
Bsp143I	GATC	6 cut(s)	622, 1052, 1166, 1306, 1552, 1696
Bsp19I	CCATGG	2 cut(s)	1131, 1744
BspANI	GGCC	6 cut(s)	558, 679, 1504, 1717, 1771, 1920
BspCNI	CTCAG	2 cut(s)	480, 1766
BspFNI	CGCG	2 cut(s)	182, 194
BspHI	TCATGA	1 cut(s)	1192
BspLI	GGNNCC	7 cut(s)	18, 69, 226, 283, 519, 739, 1054
BspMAI	CTGCAG	3 cut(s)	622, 1566, 1615
BspMI	ACCTGC	1 cut(s)	625
BspPI	GGATC	4 cut(s)	1047, 1060, 1174, 1547
BspT107I	GGYRCC	3 cut(s)	16, 67, 224
BspTNI	GGTCTC	1 cut(s)	1117
BsrBI	CCGCTC	1 cut(s)	62
BsrFI	RCCGGY	1 cut(s)	554
BsrGI	TGTACA	1 cut(s)	1006
BsrI	ACTGG	7 cut(s)	421, 837, 1054, 1185, 1444, 1451, 1551
BssAI	RCCGGY	1 cut(s)	554
BssECI	CCNNGG	8 cut(s)	278, 785, 795, 871, 1131, 1718, 1744, 1929
BssHII	GCGCGC	1 cut(s)	180
BssMI	GATC	6 cut(s)	622, 1052, 1166, 1306, 1552, 1696
BssNI	GRCGYC	3 cut(s)	17, 68, 1444
BssT1I	CCWWGG	4 cut(s)	795, 871, 1131, 1744
Bst2UI	CCWGG	5 cut(s)	676, 693, 980, 1719, 1835
Bst4CI	ACNGT	6 cut(s)	313, 581, 1484, 1739, 1862, 1988
Bst6I	CTCTTC	2 cut(s)	494, 505
BstACI	GRCGYC	3 cut(s)	17, 68, 1444
BstAPI	GCANNNNNTGC	1 cut(s)	486
BstAUI	TGTACA	1 cut(s)	1006
BstBAI	YACGTR	1 cut(s)	1470
BstC8I	GCNNGC	4 cut(s)	182, 192, 593, 1594
BstDEI	CTNAG	3 cut(s)	467, 645, 1753
BstDSI	CCRYGG	2 cut(s)	1131, 1744
BstENI	CCTNNNNNAGG	1 cut(s)	875
BstF5I	GGATG	3 cut(s)	203, 671, 1204
BstFNI	CGCG	2 cut(s)	182, 194
BstH2I	RGCGCY	6 cut(s)	20, 71, 87, 111, 254, 1848
BstHHI	GCGC	8 cut(s)	19, 70, 86, 110, 182, 184, 253, 1847
BstKTI	GATC	6 cut(s)	625, 1055, 1169, 1309, 1555, 1699
BstMAI	GTCTC	3 cut(s)	1054, 1117, 1692
BstMBI	GATC	6 cut(s)	622, 1052, 1166, 1306, 1552, 1696
BstNI	CCWGG	5 cut(s)	676, 693, 980, 1719, 1835
BstPAI	GACNNNNGTC	1 cut(s)	1284
BstSCI	CCNGG	9 cut(s)	277, 674, 691, 784, 978, 1717, 1833, 1928, 1929
BstSFI	CTRYAG	5 cut(s)	618, 666, 1562, 1611, 1735
BstSNI	TACGTA	1 cut(s)	1470
BstUI	CGCG	2 cut(s)	182, 194
BstV1I	GCAGC	6 cut(s)	464, 724, 952, 1247, 1597, 1625
BstX2I	RGATCY	2 cut(s)	1052, 1166
BstXI	CCANNNNNNTGG	2 cut(s)	1112, 1948
BstYI	RGATCY	2 cut(s)	1052, 1166
BsuI	GTATCC	2 cut(s)	406, 1031
BsuRI	GGCC	6 cut(s)	558, 679, 1504, 1717, 1771, 1920
BtgI	CCRYGG	2 cut(s)	1131, 1744
BtgZI	GCGATG	1 cut(s)	303
BtsCI	GGATG	3 cut(s)	203, 671, 1204
BtsI	GCAGTG	3 cut(s)	730, 1735, 1918
BtsIMutI	CAGTG	5 cut(s)	730, 1735, 1867, 1918, 1993
BveI	ACCTGC	1 cut(s)	625
Cac8I	GCNNGC	4 cut(s)	182, 192, 593, 1594
CaiI	CAGNNNCTG	1 cut(s)	755
CciI	TCATGA	1 cut(s)	1192
CfoI	GCGC	8 cut(s)	19, 70, 86, 110, 182, 184, 253, 1847
Cfr10I	RCCGGY	1 cut(s)	554
Cfr13I	GGNCC	5 cut(s)	282, 557, 581, 1140, 1503
Cfr9I	CCCGGG	1 cut(s)	1929
CseI	GACGC	2 cut(s)	1452, 1466
Csp6I	GTAC	6 cut(s)	225, 1007, 1471, 1622, 1840, 1858
CviAII	CATG	8 cut(s)	629, 1045, 1112, 1132, 1193, 1319, 1597, 1745
CviQI	GTAC	6 cut(s)	225, 1007, 1471, 1622, 1840, 1858
DdeI	CTNAG	3 cut(s)	467, 645, 1753
DinI	GGCGCC	2 cut(s)	18, 69
DpnI	GATC	6 cut(s)	624, 1054, 1168, 1308, 1554, 1698
DpnII	GATC	6 cut(s)	622, 1052, 1166, 1306, 1552, 1696
DriI	GACNNNNNGTC	1 cut(s)	1067
Eam1104I	CTCTTC	2 cut(s)	494, 505
Eam1105I	GACNNNNNGTC	1 cut(s)	1067
EarI	CTCTTC	2 cut(s)	494, 505
EciI	GGCGGA	4 cut(s)	81, 105, 351, 528
Eco105I	TACGTA	1 cut(s)	1470
Eco130I	CCWWGG	4 cut(s)	795, 871, 1131, 1744
Eco147I	AGGCCT	2 cut(s)	1717, 1771
Eco24I	GRGCYC	1 cut(s)	359
Eco31I	GGTCTC	1 cut(s)	1117
Eco32I	GATATC	1 cut(s)	1228
Eco47I	GGWCC	3 cut(s)	282, 581, 1140
Eco47III	AGCGCT	2 cut(s)	85, 109
Eco57I	CTGAAG	1 cut(s)	965
Eco88I	CYCGRG	3 cut(s)	1329, 1515, 1929
EcoNI	CCTNNNNNAGG	1 cut(s)	875
EcoO109I	RGGNCCY	1 cut(s)	282
EcoRI	GAATTC	1 cut(s)	974
EcoRII	CCWGG	5 cut(s)	674, 691, 978, 1717, 1833
EcoRV	GATATC	1 cut(s)	1228
EcoT14I	CCWWGG	4 cut(s)	795, 871, 1131, 1744
EcoT38I	GRGCYC	1 cut(s)	359
EgeI	GGCGCC	2 cut(s)	18, 69
EheI	GGCGCC	2 cut(s)	18, 69
ErhI	CCWWGG	4 cut(s)	795, 871, 1131, 1744
FaeI	CATG	8 cut(s)	632, 1048, 1115, 1135, 1196, 1322, 1600, 1748
FalI	AAGNNNNNCTT	2 cut(s)	894, 926
FaqI	GGGAC	1 cut(s)	1354
FatI	CATG	8 cut(s)	628, 1044, 1111, 1131, 1192, 1318, 1596, 1744
FauI	CCCGC	5 cut(s)	64, 136, 160, 199, 600
FblI	GTMKAC	2 cut(s)	380, 1734
FokI	GGATG	3 cut(s)	190, 658, 1191
FriOI	GRGCYC	1 cut(s)	359
FspBI	CTAG	5 cut(s)	458, 1355, 1374, 1557, 1848
GlaI	GCGC	8 cut(s)	18, 69, 85, 109, 181, 183, 252, 1846
GsaI	CCCAGC	3 cut(s)	251, 266, 1958
GsuI	CTGGAG	2 cut(s)	160, 1344
HaeII	RGCGCY	6 cut(s)	20, 71, 87, 111, 254, 1848
HaeIII	GGCC	6 cut(s)	558, 679, 1504, 1717, 1771, 1920
HapII	CCGG	7 cut(s)	14, 65, 200, 278, 555, 785, 1930
HgaI	GACGC	2 cut(s)	1452, 1466
HhaI	GCGC	8 cut(s)	19, 70, 86, 110, 182, 184, 253, 1847
Hin1I	GRCGYC	3 cut(s)	17, 68, 1444
Hin1II	CATG	8 cut(s)	632, 1048, 1115, 1135, 1196, 1322, 1600, 1748
Hin6I	GCGC	8 cut(s)	17, 68, 84, 108, 180, 182, 251, 1845
HinP1I	GCGC	8 cut(s)	17, 68, 84, 108, 180, 182, 251, 1845
HincII	GTYRAC	2 cut(s)	381, 1456
HindII	GTYRAC	2 cut(s)	381, 1456
HindIII	AAGCTT	1 cut(s)	1295
HinfI	GANTC	9 cut(s)	196, 454, 801, 860, 1513, 1526, 1654, 1710, 1763
HpaII	CCGG	7 cut(s)	14, 65, 200, 278, 555, 785, 1930
HphI	GGTGA	2 cut(s)	228, 234
Hpy188III	TCNNGA	5 cut(s)	405, 1193, 1223, 1361, 1796
Hpy99I	CGWCG	4 cut(s)	172, 382, 400, 1644
HpyAV	CCTTC	6 cut(s)	243, 842, 916, 940, 1700, 1910
HpyCH4III	ACNGT	6 cut(s)	313, 581, 1484, 1739, 1862, 1988
HpyCH4IV	ACGT	3 cut(s)	815, 970, 1469
HpyF3I	CTNAG	3 cut(s)	467, 645, 1753
HpySE526I	ACGT	3 cut(s)	815, 970, 1469
Hsp92I	GRCGYC	3 cut(s)	17, 68, 1444
Hsp92II	CATG	8 cut(s)	632, 1048, 1115, 1135, 1196, 1322, 1600, 1748
HspAI	GCGC	8 cut(s)	17, 68, 84, 108, 180, 182, 251, 1845
KasI	GGCGCC	2 cut(s)	16, 67
KpnI	GGTACC	1 cut(s)	228
Kzo9I	GATC	6 cut(s)	622, 1052, 1166, 1306, 1552, 1696
LmnI	GCTCC	9 cut(s)	67, 91, 115, 271, 494, 517, 1363, 1951, 2000
Lsp1109I	GCAGC	6 cut(s)	464, 724, 952, 1247, 1597, 1625
LweI	GCATC	4 cut(s)	212, 604, 680, 1469
MaeI	CTAG	5 cut(s)	458, 1355, 1374, 1557, 1848
MaeII	ACGT	3 cut(s)	815, 970, 1469
MaeIII	GTNAC	2 cut(s)	313, 1982
MalI	GATC	6 cut(s)	624, 1054, 1168, 1308, 1554, 1698
MbiI	CCGCTC	1 cut(s)	62
MboI	GATC	6 cut(s)	622, 1052, 1166, 1306, 1552, 1696
MboII	GAAGA	8 cut(s)	508, 511, 519, 522, 902, 1181, 1293, 1828
MflI	RGATCY	2 cut(s)	1052, 1166
MhlI	GDGCHC	2 cut(s)	359, 468
MluCI	AATT	6 cut(s)	432, 570, 742, 974, 993, 1076
Mly113I	GGCGCC	2 cut(s)	17, 68
MlyI	GAGTC	4 cut(s)	190, 1507, 1663, 1757
MmeI	TCCRAC	5 cut(s)	293, 409, 575, 888, 1015
MroXI	GAANNNNTTC	1 cut(s)	1080
MseI	TTAA	2 cut(s)	1311, 2005
MslI	CAYNNNNRTG	3 cut(s)	1110, 1331, 1728
MspA1I	CMGCKG	1 cut(s)	943
MspI	CCGG	7 cut(s)	14, 65, 200, 278, 555, 785, 1930
MspR9I	CCNGG	9 cut(s)	279, 676, 693, 786, 980, 1719, 1835, 1930, 1931
MvaI	CCWGG	5 cut(s)	676, 693, 980, 1719, 1835
MvnI	CGCG	2 cut(s)	182, 194
NarI	GGCGCC	2 cut(s)	17, 68
NciI	CCSGG	4 cut(s)	279, 786, 1930, 1931
NcoI	CCATGG	2 cut(s)	1131, 1744
NdeII	GATC	6 cut(s)	622, 1052, 1166, 1306, 1552, 1696
NlaIII	CATG	8 cut(s)	632, 1048, 1115, 1135, 1196, 1322, 1600, 1748
NlaIV	GGNNCC	7 cut(s)	18, 69, 226, 283, 519, 739, 1054
NmuCI	GTSAC	1 cut(s)	313
OliI	CACNNNNGTG	1 cut(s)	1331
PaeR7I	CTCGAG	1 cut(s)	1515
PagI	TCATGA	1 cut(s)	1192
PaqCI	CACCTGC	1 cut(s)	625
PauI	GCGCGC	1 cut(s)	180
PceI	AGGCCT	2 cut(s)	1717, 1771
PcsI	WCGNNNNNNNCGW	1 cut(s)	344
PdmI	GAANNNNTTC	1 cut(s)	1080
PfeI	GAWTC	5 cut(s)	454, 801, 860, 1526, 1710
PflMI	CCANNNNNTGG	1 cut(s)	1137
PleI	GAGTC	4 cut(s)	190, 1507, 1662, 1757
PluTI	GGCGCC	2 cut(s)	20, 71
PpsI	GAGTC	4 cut(s)	190, 1507, 1662, 1757
Ppu21I	YACGTR	1 cut(s)	1470
PpuMI	RGGWCCY	1 cut(s)	282
PshAI	GACNNNNGTC	1 cut(s)	1284
Psp5II	RGGWCCY	1 cut(s)	282
Psp6I	CCWGG	5 cut(s)	674, 691, 978, 1717, 1833
PspFI	CCCAGC	3 cut(s)	247, 262, 1954
PspGI	CCWGG	5 cut(s)	674, 691, 978, 1717, 1833
PspN4I	GGNNCC	7 cut(s)	18, 69, 226, 283, 519, 739, 1054
PspPI	GGNCC	5 cut(s)	282, 557, 581, 1140, 1503
PspPPI	RGGWCCY	1 cut(s)	282
PspXI	VCTCGAGB	1 cut(s)	1515
PstI	CTGCAG	3 cut(s)	622, 1566, 1615
PstNI	CAGNNNCTG	1 cut(s)	755
PsuI	RGATCY	2 cut(s)	1052, 1166
PteI	GCGCGC	1 cut(s)	180
PvuII	CAGCTG	1 cut(s)	943
RsaI	GTAC	6 cut(s)	226, 1008, 1472, 1623, 1841, 1859
RsaNI	GTAC	6 cut(s)	225, 1007, 1471, 1622, 1840, 1858
RseI	CAYNNNNRTG	3 cut(s)	1110, 1331, 1728
SalI	GTCGAC	1 cut(s)	379
SaqAI	TTAA	2 cut(s)	1311, 2005
Sau3AI	GATC	6 cut(s)	622, 1052, 1166, 1306, 1552, 1696
Sau96I	GGNCC	5 cut(s)	282, 557, 581, 1140, 1503
SchI	GAGTC	4 cut(s)	190, 1507, 1663, 1757
ScrFI	CCNGG	9 cut(s)	279, 676, 693, 786, 980, 1719, 1835, 1930, 1931
SduI	GDGCHC	2 cut(s)	359, 468
SfaNI	GCATC	4 cut(s)	212, 604, 680, 1469
SfcI	CTRYAG	5 cut(s)	618, 666, 1562, 1611, 1735
SfoI	GGCGCC	2 cut(s)	18, 69
Sfr274I	CTCGAG	1 cut(s)	1515
SinI	GGWCC	3 cut(s)	282, 581, 1140
SlaI	CTCGAG	1 cut(s)	1515
SmaI	CCCGGG	1 cut(s)	1931
SmiMI	CAYNNNNRTG	3 cut(s)	1110, 1331, 1728
SmlI	CTYRAG	2 cut(s)	1515, 1765
SmoI	CTYRAG	2 cut(s)	1515, 1765
SnaBI	TACGTA	1 cut(s)	1470
Sse9I	AATT	6 cut(s)	432, 570, 742, 974, 993, 1076
SseBI	AGGCCT	2 cut(s)	1717, 1771
SspDI	GGCGCC	2 cut(s)	16, 67
SspMI	CTAG	5 cut(s)	458, 1355, 1374, 1557, 1848
StuI	AGGCCT	2 cut(s)	1717, 1771
StyD4I	CCNGG	9 cut(s)	277, 674, 691, 784, 978, 1717, 1833, 1928, 1929
StyI	CCWWGG	4 cut(s)	795, 871, 1131, 1744
TaaI	ACNGT	6 cut(s)	313, 581, 1484, 1739, 1862, 1988
TaiI	ACGT	3 cut(s)	818, 973, 1472
TaqI	TCGA	3 cut(s)	380, 1516, 1978
TasI	AATT	6 cut(s)	432, 570, 742, 974, 993, 1076
TatI	WGTACW	2 cut(s)	1006, 1857
TfiI	GAWTC	5 cut(s)	454, 801, 860, 1526, 1710
Tru1I	TTAA	2 cut(s)	1311, 2005
Tru9I	TTAA	2 cut(s)	1311, 2005
TscAI	CASTG	5 cut(s)	730, 1735, 1867, 1918, 1993
TseFI	GTSAC	1 cut(s)	313
TseI	GCWGC	6 cut(s)	477, 712, 940, 1235, 1610, 1613
Tsp45I	GTSAC	1 cut(s)	313
TspDTI	ATGAA	5 cut(s)	1089, 1181, 1208, 1557, 1979
TspGWI	ACGGA	2 cut(s)	860, 1655
TspMI	CCCGGG	1 cut(s)	1929
TspRI	CASTG	5 cut(s)	730, 1735, 1867, 1918, 1993
Van91I	CCANNNNNTGG	1 cut(s)	1137
VpaK11BI	GGWCC	3 cut(s)	282, 581, 1140
XagI	CCTNNNNNAGG	1 cut(s)	875
XapI	RAATTY	3 cut(s)	570, 974, 1076
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1333, 1945
XhoI	CTCGAG	1 cut(s)	1515
XmaI	CCCGGG	1 cut(s)	1929
XmiI	GTMKAC	2 cut(s)	380, 1734
XmnI	GAANNNNTTC	1 cut(s)	1080
XspI	CTAG	5 cut(s)	458, 1355, 1374, 1557, 1848

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.