Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0001011

Physical Location & Seq

Genomic Coordinates Reverse (-)

29864819 .. 29870306

Gene Structure 5488 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00106280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGTCGGCGCCGGCCCCGTCCTCCACCAACTCCACCTCACCTCCTCCCCCTCCGCCGGCCAACGCTACTGCTCCTACCACTACTCCTCCGACCACCAACTCCACCGCGTCGCCGCCGACCAACTCCACCACATCGCCGCCACCTCCGGCGTCGACATCTAATACGCCGCCCATAGGAAACTTGCCGTCGGGGAACACGCCGGTCGGGGTTATAGTCGGAGTTGCGATAGGAGGGTTCAGTGTGCTTGTTGTAGTGGCCATTATCTTCTTTGTCTATCGGAGACGGAAGAACAGGTTGGCGAGAGCTAATGAGTCAGGGCAACAACCCAAAGATGACCAATTAAAAGGCCCACCTCAAAACTTGCAACAGAACTACGCTCCTCCGTCAGCAGACAAAGTAGAAATGTTTCCAATGCCTACTCATTCCCGTAAACCATCTTCAACCGGTAGCGGCTATGGATCAGATAAACCGCCCCCAGCCTTTGGATTTTCCGAAAGCACATTTACATATGAAGAGTTAGTCATGGCAACAAATGGTTTCTCCCACGACAATCTTCTTGGTCAAGGAGGTTTTGGTTATGTCCATAAAGGAATTCTTCCAAATGGGAAAGTGGTTGCAATTAAACAGCTGAAAGCTGGGAGTGGACAGGGGGAGCGTGAATTCCAGGCAGAAGTTGAAGTCATTAATCGTGTCCATCACAGACATCTTGTATCACTGGTTGGATACTGCATTAGTGGGGCCCAGAGATTGCTTGTTTATGAGTTCGTTTCCAACAGCACCTTGGAATTTCACTTGCATGGAAGGGGGCGACCAACTATGACTTGGCCAACAAGAATGAAAATTGCTGTAGGATCTGCAAAAGGATTGGCATATCTCCATGAGGACTGTCATCCCAAGATCATACATCGTGACATCAAGTCTGCCAATATTCTTATTGATGACAACTTTGAGGCAAAGGTTGCAGACTTTGGACTTGCCAAGTTGGCCTTAGATACAGATACTCATGTCTCCACAAGGGTAATGGGAACTTTTGGATACTTAGCTCCTGAATATGCATCCAGTGGAAAGCTCAGTGATAAGTCAGATGTCTTCTCATTCGGGGTCGTGCTATTGGAATTGATTACTGGACGCCAACCCATTGATAAAACTCATTCCTTCACTGATGATAGCATGGTTGAGTGGGCAAGGCCTTTGCTCGCGCGAGCATTGGAAAAGGGAAACTTTGATGGTCTTGTTGATGAAAGGTTGGAGAATGATTACAACTCCAGCGAAATGGCTTGTATGATTGCCTGCGCTGCTGCTTCTGTGCGTCATTCTGCTCGCCGTCGGCCAAAAATGAGCCAGGTAGTTCGAGCTTTGGAAGGCAATCTTTCTCCAGATGAATTAAATGAAGGAGTTATACCAGGTCAAAGTATGATATACAGTTCCTCTGAAAGCACACAATACAGCACTCAAGAATACAAGGCCGACATGTTGAAATTTAGAAAGTTAGCACTAGAAAGCCAAGAGCTAGATCAAGGAATTAGTGAGACCAGTGAGCCCAGCAGTGATTTTGGCCAGCACCAATCTGCCTCCAGTGGTGAAGGCCAACAGACCACTCAAGATATCGAACACGGGCGAATGAACAAAGACAGCCAAGACTATGGTAAAAGCTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

552

Amino Acids

59.64

Weight (kDa)

6.26

Isoelectric Point (pI)

43.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	182 - 385	1e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	183 - 385	9.1e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001011)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24540 AT3G24550
fragaria_vesca	FvH4_1g04680 FvH4_1g04680 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540
malus_domestica	MD02G1045800.v1.1 MD15G1184000.v1.1 MD15G1318900.v1.1 MD17G1193400.v1.1
prunus_persica	Prupe.3G068800_v2.0.a1 Prupe.7G232200_v2.0.a1
pyrus_communis	pycom02g03820 pycom09g12790 pycom15g16560 pycom17g19940
rosa_chinensis	RchiOBHm_Chr2g0090291 RchiOBHm_Chr2g0138371 RchiOBHm_Chr2g0138381 RchiOBHm_Chr2g0138481 RchiOBHm_Chr2g0138511 RchiOBHm_Chr2g0138521 RchiOBHm_Chr2g0138601 RchiOBHm_Chr6g0297471
rosa_laevigata	RLG00000016095 RLG00000019740 RLG00000019744 RLG00000019747
rosa_multiflora	Rmu_co8232347.1_g000001 Rmu_co8362561.1_g000001 Rmu_sc0000436.1_g000004 Rmu_sc0001534.1_g000011 Rmu_sc0006235.1_g000002 Rmu_sc0008467.1_g000011 Rmu_sc0012206.1_g000004
rosa_roxburghii	Rroxscaffold_2G00106070 Rroxscaffold_2G00106140 Rroxscaffold_2G00106150 Rroxscaffold_2G00106280 Rroxscaffold_2G00151310
rosa_rugosa	Rorug02G0006300 Rorug02G0351700 Rorug06G0272400
rosa_samantha	Rh2AG052200 Rh2AG400100 Rh2AG400200 Rh2AG400800 Rh2CG386300 Rh2DG052100 Rh2DG419800 Rh2DG419900 Rh2DG420100 Rh2DG420600 Rh2DG421200
rosa_wichuraiana	Rw2G004470 Rw2G032550 Rw2G032580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	7
AccB7I	CCANNNNNTGG	1 cut(s)	482
AccI	GTMKAC	1 cut(s)	152
AccII	CGCG	3 cut(s)	107, 1199, 1201
AciI	CCGC	7 cut(s)	53, 105, 113, 137, 167, 450, 470
AclWI	GGATC	2 cut(s)	466, 859
AcoI	YGGCCR	5 cut(s)	57, 255, 824, 1328, 1555
AcsI	RAATTY	4 cut(s)	591, 659, 785, 1478
AcyI	GRCGYC	3 cut(s)	8, 149, 1129
AfiI	CCNNNNNNNGG	3 cut(s)	55, 173, 482
AflIII	ACRYGT	1 cut(s)	1470
AgeI	ACCGGT	1 cut(s)	443
AgsI	TTSAA	3 cut(s)	441, 677, 1477
AhdI	GACNNNNNGTC	1 cut(s)	916
AjnI	CCWGG	3 cut(s)	663, 1341, 1402
AjuI	GAANNNNNNNTTGG	2 cut(s)	278, 310
AluBI	AGCT	8 cut(s)	305, 628, 635, 1043, 1069, 1355, 1510, 1653
AluI	AGCT	8 cut(s)	305, 628, 635, 1043, 1069, 1355, 1510, 1653
Alw26I	GTCTC	3 cut(s)	274, 1012, 1523
AlwI	GGATC	2 cut(s)	466, 859
ApaI	GGGCCC	1 cut(s)	742
ApeKI	GCWGC	2 cut(s)	1295, 1298
ApoI	RAATTY	4 cut(s)	591, 659, 785, 1478
AseI	ATTAAT	1 cut(s)	684
AsiGI	ACCGGT	1 cut(s)	443
Asp700I	GAANNNNTTC	1 cut(s)	405
AspLEI	GCGC	3 cut(s)	10, 1201, 1295
AspS9I	GGNCC	4 cut(s)	13, 347, 738, 739
AsuHPI	GGTGA	2 cut(s)	30, 1592
BaeGI	GKGCMC	1 cut(s)	742
BaeI	ACNNNNGTAYC	2 cut(s)	990, 1023
BalI	TGGCCA	3 cut(s)	257, 826, 1557
BanI	GGYRCC	1 cut(s)	7
BanII	GRGCYC	2 cut(s)	742, 1542
BarI	GAAGNNNNNNTAC	4 cut(s)	421, 453, 1383, 1415
BbsI	GAAGAC	1 cut(s)	1081
BbvI	GCAGC	2 cut(s)	1282, 1285
BccI	CCATC	3 cut(s)	442, 702, 1220
BceAI	ACGGC	2 cut(s)	169, 1308
BciT130I	CCWGG	3 cut(s)	665, 1343, 1404
BciVI	GTATCC	2 cut(s)	716, 1028
BcoDI	GTCTC	3 cut(s)	274, 1012, 1523
BfaI	CTAG	2 cut(s)	1496, 1511
BfmI	CTRYAG	1 cut(s)	846
BfoI	RGCGCY	1 cut(s)	11
BfuI	GTATCC	2 cut(s)	716, 1028
BglI	GCCNNNNNGGC	1 cut(s)	983
BisI	GCNGC	6 cut(s)	113, 137, 167, 451, 1296, 1299
BlsI	GCNGC	6 cut(s)	114, 138, 168, 452, 1297, 1300
Bme1390I	CCNGG	3 cut(s)	665, 1343, 1404
BmeRI	GACNNNNNGTC	1 cut(s)	916
BmgT120I	GGNCC	4 cut(s)	13, 347, 738, 739
BmiI	GGNNCC	4 cut(s)	9, 15, 739, 740
BmrFI	CCNGG	3 cut(s)	665, 1343, 1404
BmsI	GCATC	1 cut(s)	1064
BpiI	GAAGAC	1 cut(s)	1081
BpmI	CTGGAG	3 cut(s)	1249, 1359, 1558
BpuEI	CTTGAG	2 cut(s)	1437, 1584
BsaHI	GRCGYC	3 cut(s)	8, 149, 1129
BsaI	GGTCTC	1 cut(s)	1523
BsaJI	CCNNGG	1 cut(s)	780
BsaWI	WCCGGW	1 cut(s)	443
BsaXI	ACNNNNNCTCC	6 cut(s)	25, 55, 67, 70, 97, 100
Bsc4I	CCNNNNNNNGG	3 cut(s)	55, 173, 482
Bse118I	RCCGGY	4 cut(s)	10, 55, 199, 443
Bse1I	ACTGG	5 cut(s)	720, 1059, 1129, 1533, 1575
BseBI	CCWGG	3 cut(s)	665, 1343, 1404
BseDI	CCNNGG	1 cut(s)	780
BseGI	GGATG	2 cut(s)	889, 1055
BseLI	CCNNNNNNNGG	3 cut(s)	55, 173, 482
BseMII	CTCAG	1 cut(s)	1084
BseNI	ACTGG	5 cut(s)	720, 1059, 1129, 1533, 1575
BseRI	GAGGAG	3 cut(s)	33, 75, 369
BseSI	GKGCMC	1 cut(s)	742
BseXI	GCAGC	2 cut(s)	1282, 1285
BseYI	CCCAGC	3 cut(s)	475, 635, 1541
Bsh1236I	CGCG	3 cut(s)	107, 1199, 1201
Bsh1285I	CGRYCG	1 cut(s)	204
BshNI	GGYRCC	1 cut(s)	7
BshTI	ACCGGT	1 cut(s)	443
BsiEI	CGRYCG	1 cut(s)	204
BsiSI	CCGG	5 cut(s)	11, 56, 146, 200, 444
BslI	CCNNNNNNNGG	3 cut(s)	55, 173, 482
BsmAI	GTCTC	3 cut(s)	274, 1012, 1523
BsmBI	CGTCTC	1 cut(s)	274
Bso31I	GGTCTC	1 cut(s)	1523
Bsp120I	GGGCCC	1 cut(s)	738
Bsp1286I	GDGCHC	2 cut(s)	742, 1542
Bsp143I	GATC	4 cut(s)	458, 851, 897, 1513
BspACI	CCGC	7 cut(s)	53, 105, 113, 137, 167, 450, 470
BspCNI	CTCAG	1 cut(s)	1083
BspFNI	CGCG	3 cut(s)	107, 1199, 1201
BspLI	GGNNCC	4 cut(s)	9, 15, 739, 740
BspPI	GGATC	2 cut(s)	466, 859
BspT107I	GGYRCC	1 cut(s)	7
BspTNI	GGTCTC	1 cut(s)	1523
BsrFI	RCCGGY	4 cut(s)	10, 55, 199, 443
BsrI	ACTGG	5 cut(s)	720, 1059, 1129, 1533, 1575
BssAI	RCCGGY	4 cut(s)	10, 55, 199, 443
BssECI	CCNNGG	1 cut(s)	780
BssMI	GATC	4 cut(s)	458, 851, 897, 1513
BssNI	GRCGYC	3 cut(s)	8, 149, 1129
BssT1I	CCWWGG	1 cut(s)	780
Bst2UI	CCWGG	3 cut(s)	665, 1343, 1404
Bst4CI	ACNGT	2 cut(s)	887, 1424
Bst6I	CTCTTC	1 cut(s)	507
BstACI	GRCGYC	3 cut(s)	8, 149, 1129
BstAPI	GCANNNNNTGC	1 cut(s)	959
BstC8I	GCNNGC	7 cut(s)	12, 57, 1197, 1203, 1291, 1321, 1559
BstDEI	CTNAG	3 cut(s)	988, 1039, 1070
BstF5I	GGATG	2 cut(s)	889, 1055
BstFNI	CGCG	3 cut(s)	107, 1199, 1201
BstH2I	RGCGCY	1 cut(s)	11
BstHHI	GCGC	3 cut(s)	10, 1201, 1295
BstKTI	GATC	4 cut(s)	461, 854, 900, 1516
BstMAI	GTCTC	3 cut(s)	274, 1012, 1523
BstMBI	GATC	4 cut(s)	458, 851, 897, 1513
BstMCI	CGRYCG	1 cut(s)	204
BstMWI	GCNNNNNNNGC	3 cut(s)	959, 983, 1295
BstNI	CCWGG	3 cut(s)	665, 1343, 1404
BstNSI	RCATGY	1 cut(s)	1474
BstSCI	CCNGG	3 cut(s)	663, 1341, 1402
BstSFI	CTRYAG	1 cut(s)	846
BstSLI	GKGCMC	1 cut(s)	742
BstUI	CGCG	3 cut(s)	107, 1199, 1201
BstV1I	GCAGC	2 cut(s)	1282, 1285
BstV2I	GAAGAC	1 cut(s)	1081
BstX2I	RGATCY	1 cut(s)	851
BstXI	CCANNNNNNTGG	2 cut(s)	1273, 1643
BstYI	RGATCY	1 cut(s)	851
BsuI	GTATCC	2 cut(s)	716, 1028
BtgZI	GCGATG	1 cut(s)	117
BtsCI	GGATG	2 cut(s)	889, 1055
BtsI	GCAGTG	1 cut(s)	1552
BtsIMutI	CAGTG	8 cut(s)	244, 713, 1066, 1078, 1158, 1540, 1552, 1582
Cac8I	GCNNGC	7 cut(s)	12, 57, 1197, 1203, 1291, 1321, 1559
CfoI	GCGC	3 cut(s)	10, 1201, 1295
Cfr10I	RCCGGY	4 cut(s)	10, 55, 199, 443
Cfr13I	GGNCC	4 cut(s)	13, 347, 738, 739
CseI	GACGC	4 cut(s)	96, 138, 1137, 1298
CsiI	ACCWGGT	1 cut(s)	1402
CspAI	ACCGGT	1 cut(s)	443
CviAII	CATG	6 cut(s)	523, 797, 878, 1004, 1171, 1471
DdeI	CTNAG	3 cut(s)	988, 1039, 1070
DinI	GGCGCC	1 cut(s)	9
DpnI	GATC	4 cut(s)	460, 853, 899, 1515
DpnII	GATC	4 cut(s)	458, 851, 897, 1513
DriI	GACNNNNNGTC	1 cut(s)	916
EaeI	YGGCCR	5 cut(s)	57, 255, 824, 1328, 1555
Eam1104I	CTCTTC	1 cut(s)	507
Eam1105I	GACNNNNNGTC	1 cut(s)	916
EarI	CTCTTC	1 cut(s)	507
EciI	GGCGGA	1 cut(s)	42
Eco130I	CCWWGG	1 cut(s)	780
Eco147I	AGGCCT	1 cut(s)	1189
Eco24I	GRGCYC	2 cut(s)	742, 1542
Eco31I	GGTCTC	1 cut(s)	1523
Eco32I	GATATC	1 cut(s)	1606
EcoO109I	RGGNCCY	1 cut(s)	738
EcoRI	GAATTC	2 cut(s)	591, 659
EcoRII	CCWGG	3 cut(s)	663, 1341, 1402
EcoRV	GATATC	1 cut(s)	1606
EcoT14I	CCWWGG	1 cut(s)	780
EcoT22I	ATGCAT	1 cut(s)	1057
EcoT38I	GRGCYC	2 cut(s)	742, 1542
EgeI	GGCGCC	1 cut(s)	9
EheI	GGCGCC	1 cut(s)	9
ErhI	CCWWGG	1 cut(s)	780
Esp3I	CGTCTC	1 cut(s)	274
FaeI	CATG	6 cut(s)	526, 800, 881, 1007, 1174, 1474
FalI	AAGNNNNNCTT	8 cut(s)	579, 611, 971, 1003, 1205, 1237, 1353, 1385
FatI	CATG	6 cut(s)	522, 796, 877, 1003, 1170, 1470
FauNDI	CATATG	1 cut(s)	508
FblI	GTMKAC	1 cut(s)	152
Fnu4HI	GCNGC	6 cut(s)	113, 137, 167, 451, 1296, 1299
FokI	GGATG	2 cut(s)	876, 1042
FriOI	GRGCYC	2 cut(s)	742, 1542
Fsp4HI	GCNGC	6 cut(s)	113, 137, 167, 451, 1296, 1299
FspBI	CTAG	2 cut(s)	1496, 1511
GlaI	GCGC	3 cut(s)	9, 1200, 1294
GluI	GCNGC	6 cut(s)	113, 137, 167, 451, 1296, 1299
GsaI	CCCAGC	3 cut(s)	479, 639, 1545
GsuI	CTGGAG	3 cut(s)	1249, 1359, 1558
HaeII	RGCGCY	1 cut(s)	11
HapII	CCGG	5 cut(s)	11, 56, 146, 200, 444
HgaI	GACGC	4 cut(s)	96, 138, 1137, 1298
HhaI	GCGC	3 cut(s)	10, 1201, 1295
Hin1I	GRCGYC	3 cut(s)	8, 149, 1129
Hin1II	CATG	6 cut(s)	526, 800, 881, 1007, 1174, 1474
Hin6I	GCGC	3 cut(s)	8, 1199, 1293
HinP1I	GCGC	3 cut(s)	8, 1199, 1293
HincII	GTYRAC	1 cut(s)	153
HindII	GTYRAC	1 cut(s)	153
HinfI	GANTC	1 cut(s)	311
HpaII	CCGG	5 cut(s)	11, 56, 146, 200, 444
HphI	GGTGA	2 cut(s)	30, 1592
Hpy166II	GTNNAC	3 cut(s)	153, 431, 644
Hpy188I	TCNGA	7 cut(s)	90, 218, 279, 463, 493, 1084, 1432
Hpy188III	TCNNGA	6 cut(s)	908, 1046, 1376, 1454, 1601, 1656
Hpy8I	GTNNAC	3 cut(s)	153, 431, 644
Hpy99I	CGWCG	4 cut(s)	112, 154, 190, 1329
HpyAV	CCTTC	5 cut(s)	795, 1165, 1355, 1385, 1577
HpyCH4III	ACNGT	2 cut(s)	887, 1424
HpyCH4V	TGCA	7 cut(s)	364, 617, 729, 796, 857, 962, 1055
HpyF10VI	GCNNNNNNNGC	3 cut(s)	959, 983, 1295
HpyF3I	CTNAG	3 cut(s)	988, 1039, 1070
Hsp92I	GRCGYC	3 cut(s)	8, 149, 1129
Hsp92II	CATG	6 cut(s)	526, 800, 881, 1007, 1174, 1474
HspAI	GCGC	3 cut(s)	8, 1199, 1293
KasI	GGCGCC	1 cut(s)	7
KroI	GCCGGC	2 cut(s)	10, 55
KroNI	GCCGGC	2 cut(s)	12, 57
Kzo9I	GATC	4 cut(s)	458, 851, 897, 1513
LmnI	GCTCC	4 cut(s)	76, 382, 652, 1048
Lsp1109I	GCAGC	2 cut(s)	1282, 1285
LweI	GCATC	1 cut(s)	1064
MabI	ACCWGGT	1 cut(s)	1402
MaeI	CTAG	2 cut(s)	1496, 1511
MaeIII	GTNAC	1 cut(s)	908
MalI	GATC	4 cut(s)	460, 853, 899, 1515
MboI	GATC	4 cut(s)	458, 851, 897, 1513
MboII	GAAGA	7 cut(s)	256, 298, 429, 524, 545, 587, 1081
MflI	RGATCY	1 cut(s)	851
MhlI	GDGCHC	2 cut(s)	742, 1542
MlsI	TGGCCA	3 cut(s)	257, 826, 1557
MluNI	TGGCCA	3 cut(s)	257, 826, 1557
Mly113I	GGCGCC	1 cut(s)	8
MlyI	GAGTC	1 cut(s)	320
MmeI	TCCRAC	5 cut(s)	113, 196, 700, 795, 1227
Mox20I	TGGCCA	3 cut(s)	257, 826, 1557
Mph1103I	ATGCAT	1 cut(s)	1057
MroNI	GCCGGC	2 cut(s)	10, 55
MroXI	GAANNNNTTC	1 cut(s)	405
MscI	TGGCCA	3 cut(s)	257, 826, 1557
MseI	TTAA	4 cut(s)	341, 621, 684, 1385
MslI	CAYNNNNRTG	1 cut(s)	795
Msp20I	TGGCCA	3 cut(s)	257, 826, 1557
MspA1I	CMGCKG	1 cut(s)	628
MspI	CCGG	5 cut(s)	11, 56, 146, 200, 444
MspR9I	CCNGG	3 cut(s)	665, 1343, 1404
MvaI	CCWGG	3 cut(s)	665, 1343, 1404
MvnI	CGCG	3 cut(s)	107, 1199, 1201
MwoI	GCNNNNNNNGC	3 cut(s)	959, 983, 1295
NaeI	GCCGGC	2 cut(s)	12, 57
NarI	GGCGCC	1 cut(s)	8
NdeI	CATATG	1 cut(s)	508
NdeII	GATC	4 cut(s)	458, 851, 897, 1513
NgoMIV	GCCGGC	2 cut(s)	10, 55
NlaIII	CATG	6 cut(s)	526, 800, 881, 1007, 1174, 1474
NlaIV	GGNNCC	4 cut(s)	9, 15, 739, 740
NmuCI	GTSAC	1 cut(s)	908
NsiI	ATGCAT	1 cut(s)	1057
NspI	RCATGY	1 cut(s)	1474
PceI	AGGCCT	1 cut(s)	1189
PciI	ACATGT	1 cut(s)	1470
PdiI	GCCGGC	2 cut(s)	12, 57
PdmI	GAANNNNTTC	1 cut(s)	405
PflMI	CCANNNNNTGG	1 cut(s)	482
PinAI	ACCGGT	1 cut(s)	443
PkrI	GCNGC	6 cut(s)	114, 138, 168, 452, 1297, 1300
PleI	GAGTC	1 cut(s)	319
PluTI	GGCGCC	1 cut(s)	11
PpsI	GAGTC	1 cut(s)	319
PscI	ACATGT	1 cut(s)	1470
PshBI	ATTAAT	1 cut(s)	684
Psp6I	CCWGG	3 cut(s)	663, 1341, 1402
PspFI	CCCAGC	3 cut(s)	475, 635, 1541
PspGI	CCWGG	3 cut(s)	663, 1341, 1402
PspN4I	GGNNCC	4 cut(s)	9, 15, 739, 740
PspOMI	GGGCCC	1 cut(s)	738
PspPI	GGNCC	4 cut(s)	13, 347, 738, 739
PsuI	RGATCY	1 cut(s)	851
PvuII	CAGCTG	1 cut(s)	628
RseI	CAYNNNNRTG	1 cut(s)	795
SalI	GTCGAC	1 cut(s)	151
SaqAI	TTAA	4 cut(s)	341, 621, 684, 1385
SatI	GCNGC	6 cut(s)	113, 137, 167, 451, 1296, 1299
Sau3AI	GATC	4 cut(s)	458, 851, 897, 1513
Sau96I	GGNCC	4 cut(s)	13, 347, 738, 739
SchI	GAGTC	1 cut(s)	320
ScrFI	CCNGG	3 cut(s)	665, 1343, 1404
SduI	GDGCHC	2 cut(s)	742, 1542
SexAI	ACCWGGT	1 cut(s)	1402
SfaNI	GCATC	1 cut(s)	1064
SfcI	CTRYAG	1 cut(s)	846
SfoI	GGCGCC	1 cut(s)	9
SmiMI	CAYNNNNRTG	1 cut(s)	795
SmlI	CTYRAG	2 cut(s)	1452, 1599
SmoI	CTYRAG	2 cut(s)	1452, 1599
SseBI	AGGCCT	1 cut(s)	1189
SsiI	CCGC	7 cut(s)	53, 105, 113, 137, 167, 450, 470
SspDI	GGCGCC	1 cut(s)	7
SspI	AATATT	1 cut(s)	928
SspMI	CTAG	2 cut(s)	1496, 1511
StuI	AGGCCT	1 cut(s)	1189
StyD4I	CCNGG	3 cut(s)	663, 1341, 1402
StyI	CCWWGG	1 cut(s)	780
TaaI	ACNGT	2 cut(s)	887, 1424
TaqI	TCGA	3 cut(s)	152, 1351, 1608
TauI	GCSGC	4 cut(s)	115, 139, 169, 453
Tru1I	TTAA	4 cut(s)	341, 621, 684, 1385
Tru9I	TTAA	4 cut(s)	341, 621, 684, 1385
TscAI	CASTG	8 cut(s)	244, 720, 1066, 1078, 1165, 1540, 1552, 1582
TseFI	GTSAC	1 cut(s)	908
TseI	GCWGC	2 cut(s)	1295, 1298
Tsp45I	GTSAC	1 cut(s)	908
TspDTI	ATGAA	6 cut(s)	525, 851, 1254, 1395, 1404, 1637
TspGWI	ACGGA	2 cut(s)	298, 372
TspRI	CASTG	8 cut(s)	244, 720, 1066, 1078, 1165, 1540, 1552, 1582
Van91I	CCANNNNNTGG	1 cut(s)	482
VspI	ATTAAT	1 cut(s)	684
XapI	RAATTY	4 cut(s)	591, 659, 785, 1478
XceI	RCATGY	1 cut(s)	1474
XcmI	CCANNNNNNNNNTGG	3 cut(s)	778, 819, 1018
XmiI	GTMKAC	1 cut(s)	152
XmnI	GAANNNNTTC	1 cut(s)	405
XspI	CTAG	2 cut(s)	1496, 1511
Zsp2I	ATGCAT	1 cut(s)	1057

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.