Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0001011

Physical Location & Seq

Genomic Coordinates Forward (+)

56165857 .. 56172201

Gene Structure 6345 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019740

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1374 bp

ATGGTCTCCATCCCGGCATCCCCCAGTTCTCCCTTAAGCAAAACCGCGTCCCACACGTATGTTGACCACCTTCACCATGTGACCATTCTTTTTTCACCCACCCTGCGTCTTCTTCACCAAGTCCAATTCAAAAACCTCCGATTCGCTTCAAACCCCCGCTATCTTCAAACCTCGCCGGCCATGGCGGCGCCGGCCCCGTCCACCAACTCCACCTCACCTCCTCCCCCTCCGCCGGCCAGCGCTACTGCTCCTACCACTACTCCTCCCACCACCAACACTACCGCTCCGCCGCCAACTAACTCCACCACGTCGCCGCCAACAAACTCCACCGCATCGCCGCCACCTCCGGCGTCGACGTCTAATTCGCCATCTTTACCATCGGGGAGTATAGTCGGAGTTGCGATAGGAGCGTTCAGCGTACTTGTTATATTGGCCATTATCTTCTTTATCTATCGGAGATGGAAGAACAGGTTAGCGAGAGCCAATGAGTCAAGGCTACAACCCAAAGATGATCAATTAAAAGGCCCACCTCAAAACTTGCAACAGAACTATGCTCCTTCGTCAGCAGACAAAATAGAAATGTTTCCAATGCCTACTCATTCCCGTAAACCATCTTCAACTGGTAGTGGCTATGGATCAGATAAACCGCCCCCAGCCTTTGGATTTTCCGAAAGCACATTTACATATGAAGAATTAGTCATGGCAACAAATGGTTTCTCCAACGACAATCTTCTTGGTCAAGGAGGCTTTGGTTATGTCTATAAAGGAATTCTTCCAAATGGTAAAGTGGTTGCAATTAAACAGCTGAAAGCTGGGAGTGGACAGGGGGAGCGTGAATTCCAGGCAGAGGTTGAAGTCATTAATCGTGTCCATCACAGACATCTTGTATCACTGGTTGGATACTGCATTAGTGGGGCCCAGAGATTGCTTGTTTATGAGTTCGTTTCCAACAACACCTTGGAATTTCACTTGCATGGAAAGGGGCGACCAACTATGACTTGGCCAACAAGAATGAGAATTGCTCTAGGATCTGCAAAAGGATTGGCATATCTCCATGAGGACTGTCATCCCAAGATCATACACCGTGACATCAAGGCGGCCAATATTCTTATAGATGACAACTTTGAGGCAAAGGTGTTGACTTCTTCATTTTGTGCCAACAGTCGTCCTCCTCCTCACGTGACCCACAGCTTGGGCCCAGTTGGCGGCGCCACCTGCGCCATTGCATCAGATTCGCCCGTTGGGTCCTTAATGGATGCTCTTCTCTGTGCATCCGTAAGTGAGATTTTCTCTGGGTTGCATATTCAATCGTTTGATTGGCTAGTAAAAGATTGGTCGACCCGAGCTGCAACCCCATTAGGCCATTGGCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

458

Amino Acids

49.11

Weight (kDa)

9.28

Isoelectric Point (pI)

46.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	240 - 379	5.7e-24	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	242 - 379	3.6e-26	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001011)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24540 AT3G24550
fragaria_vesca	FvH4_1g04680 FvH4_1g04680 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540
malus_domestica	MD02G1045800.v1.1 MD15G1184000.v1.1 MD15G1318900.v1.1 MD17G1193400.v1.1
prunus_persica	Prupe.3G068800_v2.0.a1 Prupe.7G232200_v2.0.a1
pyrus_communis	pycom02g03820 pycom09g12790 pycom15g16560 pycom17g19940
rosa_chinensis	RchiOBHm_Chr2g0090291 RchiOBHm_Chr2g0138371 RchiOBHm_Chr2g0138381 RchiOBHm_Chr2g0138481 RchiOBHm_Chr2g0138511 RchiOBHm_Chr2g0138521 RchiOBHm_Chr2g0138601 RchiOBHm_Chr6g0297471
rosa_laevigata	RLG00000016095 RLG00000019740 RLG00000019744 RLG00000019747
rosa_multiflora	Rmu_co8232347.1_g000001 Rmu_co8362561.1_g000001 Rmu_sc0000436.1_g000004 Rmu_sc0001534.1_g000011 Rmu_sc0006235.1_g000002 Rmu_sc0008467.1_g000011 Rmu_sc0012206.1_g000004
rosa_roxburghii	Rroxscaffold_2G00106070 Rroxscaffold_2G00106140 Rroxscaffold_2G00106150 Rroxscaffold_2G00106280 Rroxscaffold_2G00151310
rosa_rugosa	Rorug02G0006300 Rorug02G0351700 Rorug06G0272400
rosa_samantha	Rh2AG052200 Rh2AG400100 Rh2AG400200 Rh2AG400800 Rh2CG386300 Rh2DG052100 Rh2DG419800 Rh2DG419900 Rh2DG420100 Rh2DG420600 Rh2DG421200
rosa_wichuraiana	Rw2G004470 Rw2G032550 Rw2G032580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1223
AatII	GACGTC	1 cut(s)	359
Acc36I	ACCTGC	1 cut(s)	1223
AccB1I	GGYRCC	2 cut(s)	187, 1208
AccB7I	CCANNNNNTGG	2 cut(s)	659, 1192
AccBSI	CCGCTC	1 cut(s)	284
AccI	GTMKAC	2 cut(s)	353, 1337
AccII	CGCG	1 cut(s)	47
AclWI	GGATC	2 cut(s)	643, 1036
AcoI	YGGCCR	5 cut(s)	177, 234, 432, 1001, 1098
AcsI	RAATTY	3 cut(s)	768, 836, 962
AcvI	CACGTG	1 cut(s)	1180
AcyI	GRCGYC	4 cut(s)	188, 350, 356, 1209
AdeI	CACNNNGTG	1 cut(s)	79
AfaI	GTAC	1 cut(s)	420
AfeI	AGCGCT	1 cut(s)	241
AfiI	CCNNNNNNNGG	5 cut(s)	232, 659, 847, 1192, 1205
AflII	CTTAAG	1 cut(s)	34
AflIII	ACRYGT	1 cut(s)	54
AgsI	TTSAA	6 cut(s)	130, 150, 167, 618, 854, 1307
AjiI	CACGTC	1 cut(s)	309
AjnI	CCWGG	1 cut(s)	840
AluBI	AGCT	4 cut(s)	805, 812, 1191, 1346
AluI	AGCT	4 cut(s)	805, 812, 1191, 1346
Alw26I	GTCTC	1 cut(s)	10
AlwI	GGATC	2 cut(s)	643, 1036
Ama87I	CYCGRG	1 cut(s)	1341
Aor51HI	AGCGCT	1 cut(s)	241
ApaI	GGGCCC	2 cut(s)	919, 1199
ApeKI	GCWGC	1 cut(s)	1346
ApoI	RAATTY	3 cut(s)	768, 836, 962
ArsI	GACNNNNNNTTYG	2 cut(s)	346, 378
AseI	ATTAAT	1 cut(s)	861
Asp700I	GAANNNNTTC	1 cut(s)	582
AspLEI	GCGC	4 cut(s)	190, 242, 1211, 1220
AspS9I	GGNCC	7 cut(s)	193, 524, 915, 916, 1195, 1196, 1245
AsuC2I	CCSGG	1 cut(s)	14
AsuHPI	GGTGA	4 cut(s)	65, 87, 107, 207
AvaI	CYCGRG	1 cut(s)	1341
AvaII	GGWCC	1 cut(s)	1245
BaeGI	GKGCMC	2 cut(s)	919, 1199
BalI	TGGCCA	2 cut(s)	434, 1003
BanI	GGYRCC	2 cut(s)	187, 1208
BanII	GRGCYC	2 cut(s)	919, 1199
BarI	GAAGNNNNNNTAC	2 cut(s)	598, 630
BbrPI	CACGTG	1 cut(s)	1180
BbsI	GAAGAC	1 cut(s)	101
BbvI	GCAGC	1 cut(s)	1333
BccI	CCATC	6 cut(s)	17, 376, 385, 453, 619, 879
BcgI	CGANNNNNNTGC	2 cut(s)	1215, 1249
BciT130I	CCWGG	1 cut(s)	842
BciVI	GTATCC	1 cut(s)	893
BclI	TGATCA	1 cut(s)	511
BcnI	CCSGG	1 cut(s)	14
BcoDI	GTCTC	1 cut(s)	10
BfaI	CTAG	2 cut(s)	1025, 1322
BfoI	RGCGCY	3 cut(s)	191, 243, 1212
BfrI	CTTAAG	1 cut(s)	34
BfuAI	ACCTGC	1 cut(s)	1223
BfuI	GTATCC	1 cut(s)	893
BglI	GCCNNNNNGGC	2 cut(s)	185, 1203
BisI	GCNGC	7 cut(s)	186, 290, 314, 338, 1098, 1207, 1347
BlsI	GCNGC	7 cut(s)	187, 291, 315, 339, 1099, 1208, 1348
Bme1390I	CCNGG	2 cut(s)	14, 842
Bme18I	GGWCC	1 cut(s)	1245
BmeT110I	CYCGRG	1 cut(s)	1341
BmgBI	CACGTC	1 cut(s)	309
BmgT120I	GGNCC	7 cut(s)	193, 524, 915, 916, 1195, 1196, 1245
BmiI	GGNNCC	7 cut(s)	189, 195, 916, 917, 1197, 1210, 1246
BmrFI	CCNGG	2 cut(s)	14, 842
BmrI	ACTGGG	2 cut(s)	18, 1193
BmsI	GCATC	5 cut(s)	26, 341, 1235, 1246, 1280
BmuI	ACTGGG	2 cut(s)	18, 1193
BpiI	GAAGAC	1 cut(s)	101
BplI	GAGNNNNNCTC	4 cut(s)	1006, 1038, 1274, 1306
BpuMI	CCSGG	1 cut(s)	14
BsaAI	YACGTR	2 cut(s)	57, 1180
BsaHI	GRCGYC	4 cut(s)	188, 350, 356, 1209
BsaI	GGTCTC	1 cut(s)	10
BsaJI	CCNNGG	2 cut(s)	180, 957
BsaXI	ACNNNNNCTCC	8 cut(s)	202, 232, 244, 247, 268, 274, 277, 298
Bsc4I	CCNNNNNNNGG	5 cut(s)	232, 659, 847, 1192, 1205
Bse118I	RCCGGY	3 cut(s)	175, 190, 232
Bse1I	ACTGG	4 cut(s)	24, 625, 897, 1199
Bse3DI	GCAATG	1 cut(s)	1221
BseBI	CCWGG	1 cut(s)	842
BseDI	CCNNGG	2 cut(s)	180, 957
BseGI	GGATG	5 cut(s)	9, 17, 1066, 1261, 1271
BseLI	CCNNNNNNNGG	5 cut(s)	232, 659, 847, 1192, 1205
BseMI	GCAATG	1 cut(s)	1221
BseNI	ACTGG	4 cut(s)	24, 625, 897, 1199
BseRI	GAGGAG	4 cut(s)	210, 252, 1161, 1164
BseSI	GKGCMC	2 cut(s)	919, 1199
BseXI	GCAGC	1 cut(s)	1333
BseYI	CCCAGC	2 cut(s)	652, 812
Bsh1236I	CGCG	1 cut(s)	47
BshNI	GGYRCC	2 cut(s)	187, 1208
BsiHKCI	CYCGRG	1 cut(s)	1341
BsiSI	CCGG	5 cut(s)	14, 176, 191, 233, 347
BslFI	GGGAC	1 cut(s)	34
BslI	CCNNNNNNNGG	5 cut(s)	232, 659, 847, 1192, 1205
BsmAI	GTCTC	1 cut(s)	10
BsmFI	GGGAC	1 cut(s)	34
Bso31I	GGTCTC	1 cut(s)	10
BsoBI	CYCGRG	1 cut(s)	1341
Bsp120I	GGGCCC	2 cut(s)	915, 1195
Bsp1286I	GDGCHC	2 cut(s)	919, 1199
Bsp143I	GATC	4 cut(s)	511, 635, 1028, 1074
Bsp19I	CCATGG	1 cut(s)	180
BspFNI	CGCG	1 cut(s)	47
BspLI	GGNNCC	7 cut(s)	189, 195, 916, 917, 1197, 1210, 1246
BspMI	ACCTGC	1 cut(s)	1223
BspPI	GGATC	2 cut(s)	643, 1036
BspQI	GCTCTTC	1 cut(s)	1266
BspT107I	GGYRCC	2 cut(s)	187, 1208
BspTI	CTTAAG	1 cut(s)	34
BspTNI	GGTCTC	1 cut(s)	10
BsrBI	CCGCTC	1 cut(s)	284
BsrDI	GCAATG	1 cut(s)	1221
BsrFI	RCCGGY	3 cut(s)	175, 190, 232
BsrI	ACTGG	4 cut(s)	24, 625, 897, 1199
BssAI	RCCGGY	3 cut(s)	175, 190, 232
BssECI	CCNNGG	2 cut(s)	180, 957
BssMI	GATC	4 cut(s)	511, 635, 1028, 1074
BssNI	GRCGYC	4 cut(s)	188, 350, 356, 1209
BssT1I	CCWWGG	2 cut(s)	180, 957
Bst2UI	CCWGG	1 cut(s)	842
Bst4CI	ACNGT	3 cut(s)	1064, 1085, 1163
Bst6I	CTCTTC	1 cut(s)	1266
BstACI	GRCGYC	4 cut(s)	188, 350, 356, 1209
BstAFI	CTTAAG	1 cut(s)	34
BstBAI	YACGTR	2 cut(s)	57, 1180
BstC8I	GCNNGC	4 cut(s)	177, 192, 234, 238
BstDSI	CCRYGG	1 cut(s)	180
BstF5I	GGATG	5 cut(s)	9, 17, 1066, 1261, 1271
BstFNI	CGCG	1 cut(s)	47
BstH2I	RGCGCY	3 cut(s)	191, 243, 1212
BstHHI	GCGC	4 cut(s)	190, 242, 1211, 1220
BstKTI	GATC	4 cut(s)	514, 638, 1031, 1077
BstMAI	GTCTC	1 cut(s)	10
BstMBI	GATC	4 cut(s)	511, 635, 1028, 1074
BstMWI	GCNNNNNNNGC	6 cut(s)	185, 191, 407, 1203, 1215, 1217
BstNI	CCWGG	1 cut(s)	842
BstSCI	CCNGG	2 cut(s)	12, 840
BstSLI	GKGCMC	2 cut(s)	919, 1199
BstUI	CGCG	1 cut(s)	47
BstV1I	GCAGC	1 cut(s)	1333
BstV2I	GAAGAC	1 cut(s)	101
BstX2I	RGATCY	1 cut(s)	1028
BstYI	RGATCY	1 cut(s)	1028
BsuI	GTATCC	1 cut(s)	893
BtgI	CCRYGG	1 cut(s)	180
BtgZI	GCGATG	1 cut(s)	318
BtrI	CACGTC	1 cut(s)	309
BtsCI	GGATG	5 cut(s)	9, 17, 1066, 1261, 1271
BtsIMutI	CAGTG	1 cut(s)	890
BveI	ACCTGC	1 cut(s)	1223
Cac8I	GCNNGC	4 cut(s)	177, 192, 234, 238
CfoI	GCGC	4 cut(s)	190, 242, 1211, 1220
Cfr10I	RCCGGY	3 cut(s)	175, 190, 232
Cfr13I	GGNCC	7 cut(s)	193, 524, 915, 916, 1195, 1196, 1245
CseI	GACGC	3 cut(s)	36, 95, 339
Csp6I	GTAC	1 cut(s)	419
CviAII	CATG	5 cut(s)	77, 181, 700, 974, 1055
CviQI	GTAC	1 cut(s)	419
DinI	GGCGCC	2 cut(s)	189, 1210
DpnI	GATC	4 cut(s)	513, 637, 1030, 1076
DpnII	GATC	4 cut(s)	511, 635, 1028, 1074
DraIII	CACNNNGTG	1 cut(s)	79
EaeI	YGGCCR	5 cut(s)	177, 234, 432, 1001, 1098
Eam1104I	CTCTTC	1 cut(s)	1266
EarI	CTCTTC	1 cut(s)	1266
EciI	GGCGGA	2 cut(s)	219, 276
Eco130I	CCWWGG	2 cut(s)	180, 957
Eco24I	GRGCYC	2 cut(s)	919, 1199
Eco31I	GGTCTC	1 cut(s)	10
Eco47I	GGWCC	1 cut(s)	1245
Eco47III	AGCGCT	1 cut(s)	241
Eco72I	CACGTG	1 cut(s)	1180
Eco88I	CYCGRG	1 cut(s)	1341
EcoO109I	RGGNCCY	2 cut(s)	915, 1245
EcoRI	GAATTC	2 cut(s)	768, 836
EcoRII	CCWGG	1 cut(s)	840
EcoT14I	CCWWGG	2 cut(s)	180, 957
EcoT38I	GRGCYC	2 cut(s)	919, 1199
EgeI	GGCGCC	2 cut(s)	189, 1210
EheI	GGCGCC	2 cut(s)	189, 1210
ErhI	CCWWGG	2 cut(s)	180, 957
FaeI	CATG	5 cut(s)	80, 184, 703, 977, 1058
FalI	AAGNNNNNCTT	2 cut(s)	756, 788
FaqI	GGGAC	1 cut(s)	34
FatI	CATG	5 cut(s)	76, 180, 699, 973, 1054
FauI	CCCGC	1 cut(s)	164
FauNDI	CATATG	1 cut(s)	685
FbaI	TGATCA	1 cut(s)	511
FblI	GTMKAC	2 cut(s)	353, 1337
Fnu4HI	GCNGC	7 cut(s)	186, 290, 314, 338, 1098, 1207, 1347
FokI	GGATG	4 cut(s)	4, 1053, 1258, 1268
FriOI	GRGCYC	2 cut(s)	919, 1199
Fsp4HI	GCNGC	7 cut(s)	186, 290, 314, 338, 1098, 1207, 1347
FspBI	CTAG	2 cut(s)	1025, 1322
GlaI	GCGC	4 cut(s)	189, 241, 1210, 1219
GluI	GCNGC	7 cut(s)	186, 290, 314, 338, 1098, 1207, 1347
GsaI	CCCAGC	2 cut(s)	656, 816
HaeII	RGCGCY	3 cut(s)	191, 243, 1212
HapII	CCGG	5 cut(s)	14, 176, 191, 233, 347
HgaI	GACGC	3 cut(s)	36, 95, 339
HhaI	GCGC	4 cut(s)	190, 242, 1211, 1220
Hin1I	GRCGYC	4 cut(s)	188, 350, 356, 1209
Hin1II	CATG	5 cut(s)	80, 184, 703, 977, 1058
Hin6I	GCGC	4 cut(s)	188, 240, 1209, 1218
HinP1I	GCGC	4 cut(s)	188, 240, 1209, 1218
HincII	GTYRAC	4 cut(s)	64, 354, 1140, 1338
HindII	GTYRAC	4 cut(s)	64, 354, 1140, 1338
HinfI	GANTC	3 cut(s)	141, 488, 1232
HpaII	CCGG	5 cut(s)	14, 176, 191, 233, 347
HphI	GGTGA	4 cut(s)	65, 87, 107, 207
Hpy166II	GTNNAC	7 cut(s)	64, 201, 354, 608, 821, 1140, 1338
Hpy188I	TCNGA	6 cut(s)	140, 395, 456, 640, 670, 1231
Hpy8I	GTNNAC	7 cut(s)	64, 201, 354, 608, 821, 1140, 1338
Hpy99I	CGWCG	3 cut(s)	313, 355, 358
HpyAV	CCTTC	2 cut(s)	80, 567
HpyCH4III	ACNGT	3 cut(s)	1064, 1085, 1163
HpyCH4IV	ACGT	4 cut(s)	56, 308, 356, 1179
HpyCH4V	TGCA	9 cut(s)	541, 794, 906, 973, 1034, 1226, 1271, 1300, 1349
HpyF10VI	GCNNNNNNNGC	6 cut(s)	185, 191, 407, 1203, 1215, 1217
HpySE526I	ACGT	4 cut(s)	56, 308, 356, 1179
Hsp92I	GRCGYC	4 cut(s)	188, 350, 356, 1209
Hsp92II	CATG	5 cut(s)	80, 184, 703, 977, 1058
HspAI	GCGC	4 cut(s)	188, 240, 1209, 1218
KasI	GGCGCC	2 cut(s)	187, 1208
KroI	GCCGGC	3 cut(s)	175, 190, 232
KroNI	GCCGGC	3 cut(s)	177, 192, 234
Ksp22I	TGATCA	1 cut(s)	511
Kzo9I	GATC	4 cut(s)	511, 635, 1028, 1074
LguI	GCTCTTC	1 cut(s)	1266
LmnI	GCTCC	5 cut(s)	253, 289, 407, 559, 829
Lsp1109I	GCAGC	1 cut(s)	1333
LweI	GCATC	5 cut(s)	26, 341, 1235, 1246, 1280
MaeI	CTAG	2 cut(s)	1025, 1322
MaeII	ACGT	4 cut(s)	56, 308, 356, 1179
MaeIII	GTNAC	3 cut(s)	79, 1085, 1180
MalI	GATC	4 cut(s)	513, 637, 1030, 1076
MbiI	CCGCTC	1 cut(s)	284
MboI	GATC	4 cut(s)	511, 635, 1028, 1074
MflI	RGATCY	1 cut(s)	1028
MhlI	GDGCHC	2 cut(s)	919, 1199
MlsI	TGGCCA	2 cut(s)	434, 1003
MluCI	AATT	9 cut(s)	125, 361, 515, 692, 768, 795, 836, 962, 1017
MluNI	TGGCCA	2 cut(s)	434, 1003
Mly113I	GGCGCC	2 cut(s)	188, 1209
MlyI	GAGTC	1 cut(s)	497
MmeI	TCCRAC	4 cut(s)	373, 744, 877, 972
Mox20I	TGGCCA	2 cut(s)	434, 1003
MroNI	GCCGGC	3 cut(s)	175, 190, 232
MroXI	GAANNNNTTC	1 cut(s)	582
MscI	TGGCCA	2 cut(s)	434, 1003
MseI	TTAA	6 cut(s)	35, 518, 798, 861, 1250, 1372
MslI	CAYNNNNRTG	2 cut(s)	57, 972
Msp20I	TGGCCA	2 cut(s)	434, 1003
MspA1I	CMGCKG	1 cut(s)	805
MspCI	CTTAAG	1 cut(s)	34
MspI	CCGG	5 cut(s)	14, 176, 191, 233, 347
MspR9I	CCNGG	2 cut(s)	14, 842
MvaI	CCWGG	1 cut(s)	842
MvnI	CGCG	1 cut(s)	47
MwoI	GCNNNNNNNGC	6 cut(s)	185, 191, 407, 1203, 1215, 1217
NaeI	GCCGGC	3 cut(s)	177, 192, 234
NarI	GGCGCC	2 cut(s)	188, 1209
NciI	CCSGG	1 cut(s)	14
NcoI	CCATGG	1 cut(s)	180
NdeI	CATATG	1 cut(s)	685
NdeII	GATC	4 cut(s)	511, 635, 1028, 1074
NgoMIV	GCCGGC	3 cut(s)	175, 190, 232
NlaIII	CATG	5 cut(s)	80, 184, 703, 977, 1058
NlaIV	GGNNCC	7 cut(s)	189, 195, 916, 917, 1197, 1210, 1246
NmuCI	GTSAC	3 cut(s)	79, 1085, 1180
PaqCI	CACCTGC	1 cut(s)	1223
PciSI	GCTCTTC	1 cut(s)	1266
PdiI	GCCGGC	3 cut(s)	177, 192, 234
PdmI	GAANNNNTTC	1 cut(s)	582
PfeI	GAWTC	2 cut(s)	141, 1232
PflMI	CCANNNNNTGG	2 cut(s)	659, 1192
PkrI	GCNGC	7 cut(s)	187, 291, 315, 339, 1099, 1208, 1348
PleI	GAGTC	1 cut(s)	496
PluTI	GGCGCC	2 cut(s)	191, 1212
PmaCI	CACGTG	1 cut(s)	1180
PmlI	CACGTG	1 cut(s)	1180
PpsI	GAGTC	1 cut(s)	496
Ppu21I	YACGTR	2 cut(s)	57, 1180
PpuMI	RGGWCCY	1 cut(s)	1245
PshBI	ATTAAT	1 cut(s)	861
Psp5II	RGGWCCY	1 cut(s)	1245
Psp6I	CCWGG	1 cut(s)	840
PspCI	CACGTG	1 cut(s)	1180
PspFI	CCCAGC	2 cut(s)	652, 812
PspGI	CCWGG	1 cut(s)	840
PspN4I	GGNNCC	7 cut(s)	189, 195, 916, 917, 1197, 1210, 1246
PspOMI	GGGCCC	2 cut(s)	915, 1195
PspPI	GGNCC	7 cut(s)	193, 524, 915, 916, 1195, 1196, 1245
PspPPI	RGGWCCY	1 cut(s)	1245
PsuI	RGATCY	1 cut(s)	1028
PvuII	CAGCTG	1 cut(s)	805
RsaI	GTAC	1 cut(s)	420
RsaNI	GTAC	1 cut(s)	419
RseI	CAYNNNNRTG	2 cut(s)	57, 972
SalI	GTCGAC	2 cut(s)	352, 1336
SapI	GCTCTTC	1 cut(s)	1266
SaqAI	TTAA	6 cut(s)	35, 518, 798, 861, 1250, 1372
SatI	GCNGC	7 cut(s)	186, 290, 314, 338, 1098, 1207, 1347
Sau3AI	GATC	4 cut(s)	511, 635, 1028, 1074
Sau96I	GGNCC	7 cut(s)	193, 524, 915, 916, 1195, 1196, 1245
SchI	GAGTC	1 cut(s)	497
ScrFI	CCNGG	2 cut(s)	14, 842
SduI	GDGCHC	2 cut(s)	919, 1199
SfaNI	GCATC	5 cut(s)	26, 341, 1235, 1246, 1280
SfoI	GGCGCC	2 cut(s)	189, 1210
SgrDI	CGTCGACG	1 cut(s)	352
SinI	GGWCC	1 cut(s)	1245
SmiMI	CAYNNNNRTG	2 cut(s)	57, 972
SmlI	CTYRAG	1 cut(s)	34
SmoI	CTYRAG	1 cut(s)	34
Sse9I	AATT	9 cut(s)	125, 361, 515, 692, 768, 795, 836, 962, 1017
SspDI	GGCGCC	2 cut(s)	187, 1208
SspI	AATATT	1 cut(s)	1105
SspMI	CTAG	2 cut(s)	1025, 1322
StyD4I	CCNGG	2 cut(s)	12, 840
StyI	CCWWGG	2 cut(s)	180, 957
TaaI	ACNGT	3 cut(s)	1064, 1085, 1163
TaiI	ACGT	4 cut(s)	59, 311, 359, 1182
TaqI	TCGA	2 cut(s)	353, 1337
TasI	AATT	9 cut(s)	125, 361, 515, 692, 768, 795, 836, 962, 1017
TauI	GCSGC	6 cut(s)	188, 292, 316, 340, 1100, 1209
TfiI	GAWTC	2 cut(s)	141, 1232
Tru1I	TTAA	6 cut(s)	35, 518, 798, 861, 1250, 1372
Tru9I	TTAA	6 cut(s)	35, 518, 798, 861, 1250, 1372
TscAI	CASTG	1 cut(s)	897
TseFI	GTSAC	3 cut(s)	79, 1085, 1180
TseI	GCWGC	1 cut(s)	1346
Tsp45I	GTSAC	3 cut(s)	79, 1085, 1180
TspDTI	ATGAA	2 cut(s)	702, 1137
TspGWI	ACGGA	1 cut(s)	1264
TspRI	CASTG	1 cut(s)	897
Van91I	CCANNNNNTGG	2 cut(s)	659, 1192
Vha464I	CTTAAG	1 cut(s)	34
VpaK11BI	GGWCC	1 cut(s)	1245
VspI	ATTAAT	1 cut(s)	861
XapI	RAATTY	3 cut(s)	768, 836, 962
XcmI	CCANNNNNNNNNTGG	3 cut(s)	955, 996, 1362
XmiI	GTMKAC	2 cut(s)	353, 1337
XmnI	GAANNNNTTC	1 cut(s)	582
XspI	CTAG	2 cut(s)	1025, 1322
ZraI	GACGTC	1 cut(s)	357

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.