Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000436.1

Orthogroup ID

OG0001011

Physical Location & Seq

Genomic Coordinates Reverse (-)

20541 .. 23856

Gene Structure 3316 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000436.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

atgtccacaactccggcgccctcctcgccgccgaccaacaccacctccccaccacccgccgcaccggcgcccacaaccccaagcgctcctccgccaacgaccccaagcgctcctccgccaacgaccccaagcgctcctccgccaacaactcccgccactccaccgcccacaactcccgccactccaccgccgacgacgacccccagcgcgccgccgcccgcgactccggcatccccaccgccgccgtcaggtaccccaccttcaccttcacccccagcgccctccaccccagctccgacatctccggggtcctcgccgccgccgccgtccaccccaaccgtcacatcgccgcctccccccaaaacgccgaccacgaacaagagccctccgccgcccaagtcgccgtcgacaacaccgtcgccgtcgtcatcgggattggatactggggttatagtcggaattgctgttggggctgtggcgattctagtggtgctcagtctttgctgcattttttgctccaagaagaagcggagaagaagagaggagcctgtctattatgtgcctccgccgccgcctccaaccggccctaaaggcgaaatttactacggtccaccacgcccgcatcaaaatactcctcctccacctgcagatcatcatgtaatcacaatgcctaagccacctcctgcacaagctgtagcatccaggccaccgccctcgccaggatatacaccgccaccgcagccatacagcagtggaggttctggttccaattattcagggtctgaaactgcactcccaccacctccgccaccggggtattccttgggattctccaaaagcacgtttacttatgacgaactggctttggcaacggaagggttctcggattccaatctccttggacagggtgggtttggatatgttcacaaaggagttcttcccaatgggaaggaagtagcggtcaagcagctgaaggctggaagtgggcaaggggaacgtgaattccaggcagaagttgaaattattagccgtgtacatcacagacatctggtttcgctggttggatactgcatgactggatccgagagactacttgtctatgaatttgttccaaataacactatggagttccacttacatggaaaagggagacctaccatggattggtccacaagactgaaaatcgctttaggatctgcaaaaggactggcatatcttcatgaggattgtcatcctaaaatcattcatcgtgatatcaaggcagctaatatacttttggatttcaagtttgagtgcaaggttgcagactttggtcttgccaagctttcttctgatcttaatactcatgtttccacccgagtgatggggacttttgggtatctagctccagaatatgcttctagtggaaaactcacagacaagtcagatgttttctcattcggggttatgcttttggagttgattactggacgccgcccagttgacgcatctcatacgtacatagaggacagtttggtagagtgggcaaggcccgttctgactcgagctttggaatcagatgactttgatgaactggttgatcctagactgcagaatagttttgaccacaatgagatggctcgcatggttgcttgtgctgcagcttgtgtacgacattctgcaaggcgacgaccacgaatgagtcaggttgtccgtgctttagagggagatgtgtctctgtctgatctgaacgaaggaatcaggcctgggcatagcagtgtctacagttcccatggaagctcagactatgactcaaggccttatgacacaaagcaacgcaatctggatatgataaaccacaggaagatggcattggaaagccaggagtacggcgctagtagcgagtacagtggtggtcgcaccaccagcgagtatggtttgaacccatctggttcaagcagtgaaggccaacgaacccgggaaaccaccagagaaatggagctgggaaagatgaacaagaacaatcgaggttacagtggaagctccgagtattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 ko05169 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164 map05169

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

677

Amino Acids

71.92

Weight (kDa)

8.26

Isoelectric Point (pI)

67.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001011)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24540 AT3G24550
fragaria_vesca	FvH4_1g04680 FvH4_1g04680 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540
malus_domestica	MD02G1045800.v1.1 MD15G1184000.v1.1 MD15G1318900.v1.1 MD17G1193400.v1.1
prunus_persica	Prupe.3G068800_v2.0.a1 Prupe.7G232200_v2.0.a1
pyrus_communis	pycom02g03820 pycom09g12790 pycom15g16560 pycom17g19940
rosa_chinensis	RchiOBHm_Chr2g0090291 RchiOBHm_Chr2g0138371 RchiOBHm_Chr2g0138381 RchiOBHm_Chr2g0138481 RchiOBHm_Chr2g0138511 RchiOBHm_Chr2g0138521 RchiOBHm_Chr2g0138601 RchiOBHm_Chr6g0297471
rosa_laevigata	RLG00000016095 RLG00000019740 RLG00000019744 RLG00000019747
rosa_multiflora	Rmu_co8232347.1_g000001 Rmu_co8362561.1_g000001 Rmu_sc0000436.1_g000004 Rmu_sc0001534.1_g000011 Rmu_sc0006235.1_g000002 Rmu_sc0008467.1_g000011 Rmu_sc0012206.1_g000004
rosa_roxburghii	Rroxscaffold_2G00106070 Rroxscaffold_2G00106140 Rroxscaffold_2G00106150 Rroxscaffold_2G00106280 Rroxscaffold_2G00151310
rosa_rugosa	Rorug02G0006300 Rorug02G0351700 Rorug06G0272400
rosa_samantha	Rh2AG052200 Rh2AG400100 Rh2AG400200 Rh2AG400800 Rh2CG386300 Rh2DG052100 Rh2DG419800 Rh2DG419900 Rh2DG420100 Rh2DG420600 Rh2DG421200
rosa_wichuraiana	Rw2G004470 Rw2G032550 Rw2G032580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	652
AasI	GACNNNNNNGTC	1 cut(s)	415
Acc36I	ACCTGC	1 cut(s)	652
Acc65I	GGTACC	1 cut(s)	251
AccB1I	GGYRCC	3 cut(s)	16, 67, 251
AccB7I	CCANNNNNTGG	1 cut(s)	1164
AccI	GTMKAC	2 cut(s)	407, 1761
AccII	CGCG	2 cut(s)	209, 221
AclWI	GGATC	4 cut(s)	1074, 1087, 1201, 1574
AcsI	RAATTY	3 cut(s)	597, 1001, 1103
AcuI	CTGAAG	1 cut(s)	992
AcyI	GRCGYC	3 cut(s)	17, 68, 1471
AfaI	GTAC	6 cut(s)	253, 1035, 1499, 1650, 1868, 1886
AfeI	AGCGCT	3 cut(s)	85, 109, 133
AfiI	CCNNNNNNNGG	7 cut(s)	248, 581, 719, 812, 904, 1164, 1363
AgsI	TTSAA	4 cut(s)	1019, 1285, 1921, 1935
AhdI	GACNNNNNGTC	1 cut(s)	1094
AjnI	CCWGG	5 cut(s)	701, 718, 1005, 1744, 1860
AjuI	GAANNNNNNNTTGG	2 cut(s)	1835, 1867
AleI	CACNNNNGTG	1 cut(s)	1358
AloI	GAACNNNNNNTCC	2 cut(s)	987, 1019
Alw21I	GWGCWC	1 cut(s)	495
Alw26I	GTCTC	3 cut(s)	1081, 1144, 1719
AlwI	GGATC	4 cut(s)	1074, 1087, 1201, 1574
AlwNI	CAGNNNCTG	1 cut(s)	782
Ama87I	CYCGRG	3 cut(s)	1356, 1542, 1956
Aor51HI	AGCGCT	3 cut(s)	85, 109, 133
AoxI	GGCC	6 cut(s)	583, 704, 1529, 1742, 1796, 1945
ApeKI	GCWGC	6 cut(s)	504, 739, 967, 1262, 1637, 1640
ApoI	RAATTY	3 cut(s)	597, 1001, 1103
ArsI	GACNNNNNNTTYG	2 cut(s)	1531, 1563
Asp700I	GAANNNNTTC	1 cut(s)	1107
Asp718I	GGTACC	1 cut(s)	251
AspLEI	GCGC	9 cut(s)	19, 70, 86, 110, 134, 209, 211, 280, 1874
AspS9I	GGNCC	5 cut(s)	309, 584, 608, 1167, 1530
AsuC2I	CCSGG	4 cut(s)	306, 813, 1957, 1958
AsuHPI	GGTGA	2 cut(s)	255, 261
AvaI	CYCGRG	3 cut(s)	1356, 1542, 1956
AvaII	GGWCC	3 cut(s)	309, 608, 1167
BaeI	ACNNNNGTAYC	2 cut(s)	432, 465
BamHI	GGATCC	1 cut(s)	1079
BanI	GGYRCC	3 cut(s)	16, 67, 251
BanII	GRGCYC	1 cut(s)	386
BarI	GAAGNNNNNNTAC	2 cut(s)	244, 276
Bbv12I	GWGCWC	1 cut(s)	495
BbvI	GCAGC	6 cut(s)	491, 751, 979, 1274, 1624, 1652
BccI	CCATC	4 cut(s)	1357, 1609, 1840, 1933
BceAI	ACGGC	6 cut(s)	229, 310, 388, 406, 1014, 1885
BciT130I	CCWGG	5 cut(s)	703, 720, 1007, 1746, 1862
BciVI	GTATCC	2 cut(s)	433, 1058
BcnI	CCSGG	4 cut(s)	306, 813, 1957, 1958
BcoDI	GTCTC	3 cut(s)	1081, 1144, 1719
BfaI	CTAG	5 cut(s)	485, 1382, 1401, 1584, 1875
BfmI	CTRYAG	5 cut(s)	645, 693, 1589, 1638, 1762
BfoI	RGCGCY	7 cut(s)	20, 71, 87, 111, 135, 281, 1875
BfuAI	ACCTGC	1 cut(s)	652
BfuI	GTATCC	2 cut(s)	433, 1058
BglI	GCCNNNNNGGC	2 cut(s)	65, 591
Bme1390I	CCNGG	9 cut(s)	306, 703, 720, 813, 1007, 1746, 1862, 1957, 1958
Bme18I	GGWCC	3 cut(s)	309, 608, 1167
BmeRI	GACNNNNNGTC	1 cut(s)	1094
BmeT110I	CYCGRG	3 cut(s)	1356, 1542, 1956
BmgT120I	GGNCC	5 cut(s)	309, 584, 608, 1167, 1530
BmiI	GGNNCC	7 cut(s)	18, 69, 253, 310, 546, 766, 1081
BmrFI	CCNGG	9 cut(s)	306, 703, 720, 813, 1007, 1746, 1862, 1957, 1958
BmrI	ACTGGG	2 cut(s)	453, 1472
BmsI	GCATC	4 cut(s)	239, 631, 707, 1496
BmuI	ACTGGG	2 cut(s)	453, 1472
BoxI	GACNNNNGTC	1 cut(s)	1311
BpmI	CTGGAG	1 cut(s)	1371
Bpu10I	CCTNAGC	1 cut(s)	672
BpuEI	CTTGAG	1 cut(s)	1777
BpuMI	CCSGG	4 cut(s)	306, 813, 1957, 1958
BsaAI	YACGTR	1 cut(s)	1497
BsaBI	GATNNNNATC	2 cut(s)	891, 1230
BsaHI	GRCGYC	3 cut(s)	17, 68, 1471
BsaI	GGTCTC	1 cut(s)	1144
BsaJI	CCNNGG	8 cut(s)	305, 812, 822, 898, 1158, 1745, 1771, 1956
BsaXI	ACNNNNNCTCC	6 cut(s)	29, 59, 277, 307, 622, 652
Bsc4I	CCNNNNNNNGG	7 cut(s)	248, 581, 719, 812, 904, 1164, 1363
Bse118I	RCCGGY	2 cut(s)	64, 581
Bse1I	ACTGG	7 cut(s)	448, 864, 1081, 1212, 1471, 1478, 1578
Bse8I	GATNNNNATC	2 cut(s)	891, 1230
BseBI	CCWGG	5 cut(s)	703, 720, 1007, 1746, 1862
BseDI	CCNNGG	8 cut(s)	305, 812, 822, 898, 1158, 1745, 1771, 1956
BseGI	GGATG	3 cut(s)	230, 698, 1231
BseJI	GATNNNNATC	2 cut(s)	891, 1230
BseLI	CCNNNNNNNGG	7 cut(s)	248, 581, 719, 812, 904, 1164, 1363
BseMII	CTCAG	2 cut(s)	508, 1794
BseNI	ACTGG	7 cut(s)	448, 864, 1081, 1212, 1471, 1478, 1578
BsePI	GCGCGC	1 cut(s)	207
BseRI	GAGGAG	7 cut(s)	13, 78, 102, 126, 557, 624, 627
BseXI	GCAGC	6 cut(s)	491, 751, 979, 1274, 1624, 1652
BseYI	CCCAGC	4 cut(s)	203, 274, 289, 1981
BsgI	GTGCAG	2 cut(s)	669, 774
Bsh1236I	CGCG	2 cut(s)	209, 221
BshFI	GGCC	6 cut(s)	585, 706, 1531, 1744, 1798, 1947
BshNI	GGYRCC	3 cut(s)	16, 67, 251
BsiHKAI	GWGCWC	1 cut(s)	495
BsiHKCI	CYCGRG	3 cut(s)	1356, 1542, 1956
BsiSI	CCGG	7 cut(s)	14, 65, 227, 305, 582, 812, 1957
BslFI	GGGAC	1 cut(s)	1381
BslI	CCNNNNNNNGG	7 cut(s)	248, 581, 719, 812, 904, 1164, 1363
BsmAI	GTCTC	3 cut(s)	1081, 1144, 1719
BsmFI	GGGAC	1 cut(s)	1381
BsnI	GGCC	6 cut(s)	585, 706, 1531, 1744, 1798, 1947
Bso31I	GGTCTC	1 cut(s)	1144
BsoBI	CYCGRG	3 cut(s)	1356, 1542, 1956
Bsp1286I	GDGCHC	2 cut(s)	386, 495
Bsp1407I	TGTACA	1 cut(s)	1033
Bsp143I	GATC	6 cut(s)	649, 1079, 1193, 1333, 1579, 1723
Bsp19I	CCATGG	2 cut(s)	1158, 1771
BspANI	GGCC	6 cut(s)	585, 706, 1531, 1744, 1798, 1947
BspCNI	CTCAG	2 cut(s)	507, 1793
BspFNI	CGCG	2 cut(s)	209, 221
BspHI	TCATGA	1 cut(s)	1219
BspLI	GGNNCC	7 cut(s)	18, 69, 253, 310, 546, 766, 1081
BspMAI	CTGCAG	3 cut(s)	649, 1593, 1642
BspMI	ACCTGC	1 cut(s)	652
BspPI	GGATC	4 cut(s)	1074, 1087, 1201, 1574
BspT107I	GGYRCC	3 cut(s)	16, 67, 251
BspTNI	GGTCTC	1 cut(s)	1144
BsrFI	RCCGGY	2 cut(s)	64, 581
BsrGI	TGTACA	1 cut(s)	1033
BsrI	ACTGG	7 cut(s)	448, 864, 1081, 1212, 1471, 1478, 1578
BssAI	RCCGGY	2 cut(s)	64, 581
BssECI	CCNNGG	8 cut(s)	305, 812, 822, 898, 1158, 1745, 1771, 1956
BssHII	GCGCGC	1 cut(s)	207
BssMI	GATC	6 cut(s)	649, 1079, 1193, 1333, 1579, 1723
BssNI	GRCGYC	3 cut(s)	17, 68, 1471
BssT1I	CCWWGG	4 cut(s)	822, 898, 1158, 1771
Bst2UI	CCWGG	5 cut(s)	703, 720, 1007, 1746, 1862
Bst4CI	ACNGT	7 cut(s)	340, 417, 608, 1511, 1766, 1889, 2015
Bst6I	CTCTTC	1 cut(s)	532
BstACI	GRCGYC	3 cut(s)	17, 68, 1471
BstAPI	GCANNNNNTGC	1 cut(s)	513
BstAUI	TGTACA	1 cut(s)	1033
BstBAI	YACGTR	1 cut(s)	1497
BstC8I	GCNNGC	4 cut(s)	209, 219, 620, 1621
BstDEI	CTNAG	3 cut(s)	494, 672, 1780
BstDSI	CCRYGG	2 cut(s)	1158, 1771
BstENI	CCTNNNNNAGG	1 cut(s)	902
BstF5I	GGATG	3 cut(s)	230, 698, 1231
BstFNI	CGCG	2 cut(s)	209, 221
BstH2I	RGCGCY	7 cut(s)	20, 71, 87, 111, 135, 281, 1875
BstHHI	GCGC	9 cut(s)	19, 70, 86, 110, 134, 209, 211, 280, 1874
BstKTI	GATC	6 cut(s)	652, 1082, 1196, 1336, 1582, 1726
BstMAI	GTCTC	3 cut(s)	1081, 1144, 1719
BstMBI	GATC	6 cut(s)	649, 1079, 1193, 1333, 1579, 1723
BstNI	CCWGG	5 cut(s)	703, 720, 1007, 1746, 1862
BstPAI	GACNNNNGTC	1 cut(s)	1311
BstSCI	CCNGG	9 cut(s)	304, 701, 718, 811, 1005, 1744, 1860, 1955, 1956
BstSFI	CTRYAG	5 cut(s)	645, 693, 1589, 1638, 1762
BstSNI	TACGTA	1 cut(s)	1497
BstUI	CGCG	2 cut(s)	209, 221
BstV1I	GCAGC	6 cut(s)	491, 751, 979, 1274, 1624, 1652
BstX2I	RGATCY	2 cut(s)	1079, 1193
BstXI	CCANNNNNNTGG	2 cut(s)	1139, 1975
BstYI	RGATCY	2 cut(s)	1079, 1193
BsuI	GTATCC	2 cut(s)	433, 1058
BsuRI	GGCC	6 cut(s)	585, 706, 1531, 1744, 1798, 1947
BtgI	CCRYGG	2 cut(s)	1158, 1771
BtgZI	GCGATG	1 cut(s)	330
BtsCI	GGATG	3 cut(s)	230, 698, 1231
BtsI	GCAGTG	3 cut(s)	757, 1762, 1945
BtsIMutI	CAGTG	5 cut(s)	757, 1762, 1894, 1945, 2020
BveI	ACCTGC	1 cut(s)	652
Cac8I	GCNNGC	4 cut(s)	209, 219, 620, 1621
CaiI	CAGNNNCTG	1 cut(s)	782
CciI	TCATGA	1 cut(s)	1219
CfoI	GCGC	9 cut(s)	19, 70, 86, 110, 134, 209, 211, 280, 1874
Cfr10I	RCCGGY	2 cut(s)	64, 581
Cfr13I	GGNCC	5 cut(s)	309, 584, 608, 1167, 1530
Cfr9I	CCCGGG	1 cut(s)	1956
CseI	GACGC	2 cut(s)	1479, 1493
Csp6I	GTAC	6 cut(s)	252, 1034, 1498, 1649, 1867, 1885
CviAII	CATG	8 cut(s)	656, 1072, 1139, 1159, 1220, 1346, 1624, 1772
CviQI	GTAC	6 cut(s)	252, 1034, 1498, 1649, 1867, 1885
DdeI	CTNAG	3 cut(s)	494, 672, 1780
DinI	GGCGCC	2 cut(s)	18, 69
DpnI	GATC	6 cut(s)	651, 1081, 1195, 1335, 1581, 1725
DpnII	GATC	6 cut(s)	649, 1079, 1193, 1333, 1579, 1723
DrdI	GACNNNNNNGTC	1 cut(s)	415
DriI	GACNNNNNGTC	1 cut(s)	1094
DseDI	GACNNNNNNGTC	1 cut(s)	415
Eam1104I	CTCTTC	1 cut(s)	532
Eam1105I	GACNNNNNGTC	1 cut(s)	1094
EarI	CTCTTC	1 cut(s)	532
EciI	GGCGGA	6 cut(s)	81, 105, 129, 378, 555, 795
Eco105I	TACGTA	1 cut(s)	1497
Eco130I	CCWWGG	4 cut(s)	822, 898, 1158, 1771
Eco147I	AGGCCT	2 cut(s)	1744, 1798
Eco24I	GRGCYC	1 cut(s)	386
Eco31I	GGTCTC	1 cut(s)	1144
Eco32I	GATATC	1 cut(s)	1255
Eco47I	GGWCC	3 cut(s)	309, 608, 1167
Eco47III	AGCGCT	3 cut(s)	85, 109, 133
Eco57I	CTGAAG	1 cut(s)	992
Eco88I	CYCGRG	3 cut(s)	1356, 1542, 1956
EcoNI	CCTNNNNNAGG	1 cut(s)	902
EcoO109I	RGGNCCY	1 cut(s)	309
EcoRI	GAATTC	1 cut(s)	1001
EcoRII	CCWGG	5 cut(s)	701, 718, 1005, 1744, 1860
EcoRV	GATATC	1 cut(s)	1255
EcoT14I	CCWWGG	4 cut(s)	822, 898, 1158, 1771
EcoT38I	GRGCYC	1 cut(s)	386
EgeI	GGCGCC	2 cut(s)	18, 69
EheI	GGCGCC	2 cut(s)	18, 69
ErhI	CCWWGG	4 cut(s)	822, 898, 1158, 1771
FaeI	CATG	8 cut(s)	659, 1075, 1142, 1162, 1223, 1349, 1627, 1775
FalI	AAGNNNNNCTT	2 cut(s)	921, 953
FaqI	GGGAC	1 cut(s)	1381
FatI	CATG	8 cut(s)	655, 1071, 1138, 1158, 1219, 1345, 1623, 1771
FauI	CCCGC	5 cut(s)	64, 160, 184, 226, 627
FblI	GTMKAC	2 cut(s)	407, 1761
FokI	GGATG	3 cut(s)	217, 685, 1218
FriOI	GRGCYC	1 cut(s)	386
FspBI	CTAG	5 cut(s)	485, 1382, 1401, 1584, 1875
GlaI	GCGC	9 cut(s)	18, 69, 85, 109, 133, 208, 210, 279, 1873
GsaI	CCCAGC	4 cut(s)	207, 278, 293, 1985
GsuI	CTGGAG	1 cut(s)	1371
HaeII	RGCGCY	7 cut(s)	20, 71, 87, 111, 135, 281, 1875
HaeIII	GGCC	6 cut(s)	585, 706, 1531, 1744, 1798, 1947
HapII	CCGG	7 cut(s)	14, 65, 227, 305, 582, 812, 1957
HgaI	GACGC	2 cut(s)	1479, 1493
HhaI	GCGC	9 cut(s)	19, 70, 86, 110, 134, 209, 211, 280, 1874
Hin1I	GRCGYC	3 cut(s)	17, 68, 1471
Hin1II	CATG	8 cut(s)	659, 1075, 1142, 1162, 1223, 1349, 1627, 1775
Hin6I	GCGC	9 cut(s)	17, 68, 84, 108, 132, 207, 209, 278, 1872
HinP1I	GCGC	9 cut(s)	17, 68, 84, 108, 132, 207, 209, 278, 1872
HincII	GTYRAC	2 cut(s)	408, 1483
HindII	GTYRAC	2 cut(s)	408, 1483
HindIII	AAGCTT	1 cut(s)	1322
HinfI	GANTC	9 cut(s)	223, 481, 828, 887, 1540, 1553, 1681, 1737, 1790
HpaII	CCGG	7 cut(s)	14, 65, 227, 305, 582, 812, 1957
HphI	GGTGA	2 cut(s)	255, 261
Hpy188III	TCNNGA	5 cut(s)	432, 1220, 1250, 1388, 1823
Hpy99I	CGWCG	6 cut(s)	196, 199, 409, 421, 427, 1671
HpyAV	CCTTC	7 cut(s)	270, 276, 869, 943, 967, 1727, 1937
HpyCH4III	ACNGT	7 cut(s)	340, 417, 608, 1511, 1766, 1889, 2015
HpyCH4IV	ACGT	3 cut(s)	842, 997, 1496
HpyF3I	CTNAG	3 cut(s)	494, 672, 1780
HpySE526I	ACGT	3 cut(s)	842, 997, 1496
Hsp92I	GRCGYC	3 cut(s)	17, 68, 1471
Hsp92II	CATG	8 cut(s)	659, 1075, 1142, 1162, 1223, 1349, 1627, 1775
HspAI	GCGC	9 cut(s)	17, 68, 84, 108, 132, 207, 209, 278, 1872
KasI	GGCGCC	2 cut(s)	16, 67
KpnI	GGTACC	1 cut(s)	255
Kzo9I	GATC	6 cut(s)	649, 1079, 1193, 1333, 1579, 1723
LmnI	GCTCC	9 cut(s)	91, 115, 139, 298, 521, 544, 1390, 1978, 2027
Lsp1109I	GCAGC	6 cut(s)	491, 751, 979, 1274, 1624, 1652
LweI	GCATC	4 cut(s)	239, 631, 707, 1496
MaeI	CTAG	5 cut(s)	485, 1382, 1401, 1584, 1875
MaeII	ACGT	3 cut(s)	842, 997, 1496
MaeIII	GTNAC	2 cut(s)	340, 2009
MalI	GATC	6 cut(s)	651, 1081, 1195, 1335, 1581, 1725
MboI	GATC	6 cut(s)	649, 1079, 1193, 1333, 1579, 1723
MboII	GAAGA	7 cut(s)	535, 546, 549, 929, 1208, 1320, 1855
MflI	RGATCY	2 cut(s)	1079, 1193
MhlI	GDGCHC	2 cut(s)	386, 495
MluCI	AATT	6 cut(s)	459, 597, 769, 1001, 1020, 1103
Mly113I	GGCGCC	2 cut(s)	17, 68
MlyI	GAGTC	4 cut(s)	217, 1534, 1690, 1784
MmeI	TCCRAC	4 cut(s)	320, 436, 602, 1042
MroXI	GAANNNNTTC	1 cut(s)	1107
MseI	TTAA	2 cut(s)	1338, 2032
MslI	CAYNNNNRTG	3 cut(s)	1137, 1358, 1755
MspA1I	CMGCKG	1 cut(s)	970
MspI	CCGG	7 cut(s)	14, 65, 227, 305, 582, 812, 1957
MspR9I	CCNGG	9 cut(s)	306, 703, 720, 813, 1007, 1746, 1862, 1957, 1958
MvaI	CCWGG	5 cut(s)	703, 720, 1007, 1746, 1862
MvnI	CGCG	2 cut(s)	209, 221
NarI	GGCGCC	2 cut(s)	17, 68
NciI	CCSGG	4 cut(s)	306, 813, 1957, 1958
NcoI	CCATGG	2 cut(s)	1158, 1771
NdeII	GATC	6 cut(s)	649, 1079, 1193, 1333, 1579, 1723
NlaIII	CATG	8 cut(s)	659, 1075, 1142, 1162, 1223, 1349, 1627, 1775
NlaIV	GGNNCC	7 cut(s)	18, 69, 253, 310, 546, 766, 1081
NmuCI	GTSAC	1 cut(s)	340
OliI	CACNNNNGTG	1 cut(s)	1358
PaeR7I	CTCGAG	1 cut(s)	1542
PagI	TCATGA	1 cut(s)	1219
PaqCI	CACCTGC	1 cut(s)	652
PauI	GCGCGC	1 cut(s)	207
PceI	AGGCCT	2 cut(s)	1744, 1798
PcsI	WCGNNNNNNNCGW	2 cut(s)	371, 413
PdmI	GAANNNNTTC	1 cut(s)	1107
PfeI	GAWTC	5 cut(s)	481, 828, 887, 1553, 1737
PflMI	CCANNNNNTGG	1 cut(s)	1164
PleI	GAGTC	4 cut(s)	217, 1534, 1689, 1784
PluTI	GGCGCC	2 cut(s)	20, 71
PpsI	GAGTC	4 cut(s)	217, 1534, 1689, 1784
Ppu21I	YACGTR	1 cut(s)	1497
PpuMI	RGGWCCY	1 cut(s)	309
PshAI	GACNNNNGTC	1 cut(s)	1311
Psp5II	RGGWCCY	1 cut(s)	309
Psp6I	CCWGG	5 cut(s)	701, 718, 1005, 1744, 1860
PspFI	CCCAGC	4 cut(s)	203, 274, 289, 1981
PspGI	CCWGG	5 cut(s)	701, 718, 1005, 1744, 1860
PspN4I	GGNNCC	7 cut(s)	18, 69, 253, 310, 546, 766, 1081
PspPI	GGNCC	5 cut(s)	309, 584, 608, 1167, 1530
PspPPI	RGGWCCY	1 cut(s)	309
PspXI	VCTCGAGB	1 cut(s)	1542
PstI	CTGCAG	3 cut(s)	649, 1593, 1642
PstNI	CAGNNNCTG	1 cut(s)	782
PsuI	RGATCY	2 cut(s)	1079, 1193
PteI	GCGCGC	1 cut(s)	207
PvuII	CAGCTG	1 cut(s)	970
RsaI	GTAC	6 cut(s)	253, 1035, 1499, 1650, 1868, 1886
RsaNI	GTAC	6 cut(s)	252, 1034, 1498, 1649, 1867, 1885
RseI	CAYNNNNRTG	3 cut(s)	1137, 1358, 1755
SalI	GTCGAC	1 cut(s)	406
SaqAI	TTAA	2 cut(s)	1338, 2032
Sau3AI	GATC	6 cut(s)	649, 1079, 1193, 1333, 1579, 1723
Sau96I	GGNCC	5 cut(s)	309, 584, 608, 1167, 1530
SchI	GAGTC	4 cut(s)	217, 1534, 1690, 1784
ScrFI	CCNGG	9 cut(s)	306, 703, 720, 813, 1007, 1746, 1862, 1957, 1958
SduI	GDGCHC	2 cut(s)	386, 495
SfaNI	GCATC	4 cut(s)	239, 631, 707, 1496
SfcI	CTRYAG	5 cut(s)	645, 693, 1589, 1638, 1762
SfoI	GGCGCC	2 cut(s)	18, 69
Sfr274I	CTCGAG	1 cut(s)	1542
SgrAI	CRCCGGYG	1 cut(s)	64
SinI	GGWCC	3 cut(s)	309, 608, 1167
SlaI	CTCGAG	1 cut(s)	1542
SmaI	CCCGGG	1 cut(s)	1958
SmiMI	CAYNNNNRTG	3 cut(s)	1137, 1358, 1755
SmlI	CTYRAG	2 cut(s)	1542, 1792
SmoI	CTYRAG	2 cut(s)	1542, 1792
SnaBI	TACGTA	1 cut(s)	1497
Sse9I	AATT	6 cut(s)	459, 597, 769, 1001, 1020, 1103
SseBI	AGGCCT	2 cut(s)	1744, 1798
SspDI	GGCGCC	2 cut(s)	16, 67
SspMI	CTAG	5 cut(s)	485, 1382, 1401, 1584, 1875
StuI	AGGCCT	2 cut(s)	1744, 1798
StyD4I	CCNGG	9 cut(s)	304, 701, 718, 811, 1005, 1744, 1860, 1955, 1956
StyI	CCWWGG	4 cut(s)	822, 898, 1158, 1771
TaaI	ACNGT	7 cut(s)	340, 417, 608, 1511, 1766, 1889, 2015
TaiI	ACGT	3 cut(s)	845, 1000, 1499
TaqI	TCGA	3 cut(s)	407, 1543, 2005
TasI	AATT	6 cut(s)	459, 597, 769, 1001, 1020, 1103
TatI	WGTACW	2 cut(s)	1033, 1884
TfiI	GAWTC	5 cut(s)	481, 828, 887, 1553, 1737
Tru1I	TTAA	2 cut(s)	1338, 2032
Tru9I	TTAA	2 cut(s)	1338, 2032
TscAI	CASTG	5 cut(s)	757, 1762, 1894, 1945, 2020
TseFI	GTSAC	1 cut(s)	340
TseI	GCWGC	6 cut(s)	504, 739, 967, 1262, 1637, 1640
Tsp45I	GTSAC	1 cut(s)	340
TspDTI	ATGAA	5 cut(s)	1116, 1208, 1235, 1584, 2006
TspGWI	ACGGA	2 cut(s)	887, 1682
TspMI	CCCGGG	1 cut(s)	1956
TspRI	CASTG	5 cut(s)	757, 1762, 1894, 1945, 2020
Van91I	CCANNNNNTGG	1 cut(s)	1164
VpaK11BI	GGWCC	3 cut(s)	309, 608, 1167
XagI	CCTNNNNNAGG	1 cut(s)	902
XapI	RAATTY	3 cut(s)	597, 1001, 1103
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1360, 1972
XhoI	CTCGAG	1 cut(s)	1542
XmaI	CCCGGG	1 cut(s)	1956
XmiI	GTMKAC	2 cut(s)	407, 1761
XmnI	GAANNNNTTC	1 cut(s)	1107
XspI	CTAG	5 cut(s)	485, 1382, 1401, 1584, 1875

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.