Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0001011

Physical Location & Seq

Genomic Coordinates Reverse (-)

23194969 .. 23199947

Gene Structure 4979 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1193400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGTCGGCGCCGTCTCCGGCGACCAACTCCACGTCGCCTCCTCCTCCTTCACCTGCGACTACCGCCACCTCACCAACTCCTCCTACGACCAACGCCACCGCGCCAACTCCTCCTTCGACGACCAACGACTCCACACCTTCTCCGCCTCCTCCAACGGTGACAGCGTCAGCGCCGACCGCGTCTCCGCCACCTCCGCAACCTGCGTCTAATTCGCCGGGATTGCCGACGAACCCAAACTTGGGGGTTATATTGGGGGTTGTGATTGGAGGGTTTTGTACGCTACTTGTGGTGGGCATTTTCTTCCTTTTCTACAGAAGGCGAAAGAGGCGGCAGGCGAGAGCGCAGGAGTCGGGCAACTATCCAGAAGAACCCAAAAATGATTTTGGTGGTCCACCTCAGTATTTGCAACATAATTATGTTCCTCCACCACAAAAAGTAGAACTGTTTCCAAAGCCTACTCATCCCCCAGTACCATCTTCAAGTTCAACTAGTAGCAGCTTGGGCTCTGAGAAACCACCCTCAGTAGCATCATCTGGCTTTGCCTTTGGATCGTCACAAATCACATTTACATACGAAGAATTGGCGATGGCAACAAATGGTTTCTCCAATGTCAATCTCCTTGGTCAAGGAGGATTTGGATATGTTCATAAAGGAGTCCTACCAAATGGGAAAGTGGTTGCAATTAAGCAGCTGAAAGCTGGGAGTGGGCAAGGGGAGCGTGAATTCCAAGCAGAGATTGAAGTTATTAGTCGTGTCCATCATAGACATCTTGTTTCACTGGTTGGATACTGCATTAGTGGGGTCCAGAGGTTGCTTGTTTACGAGTTCGTTCCAAACAATACCCTGGAATTTCATCTGCATGGAAAGGGGAGACCAACTATGGATTGGCCAACTAGATTGAAAATCGCCCTAGGTTCTGCAAAAGGATTGGCATATCTCCATGAGGACTGTCAACCCAAGATCATACACCGTGACATCAAGGCAGCTAATATTCTTCTTGATCATCACTTTGAGGCAAAGGTTGCAGATTTTGGACTTGCCAAGTTGTCTTTAGATACAGATACTCATGTTTCCACAAGGGTCATGGGAACTTTTGGTTACTTAGCTCCTGAATATGCATCTAGCGGAAAGCTCACTGAGAAGTCAGATGTATTTTCGTATGGGGTTGTACTTTTGGAGTTGATAACTGGACGCCAACCCATTGATAAAACTCAAACCTTCACTGATGATAGCATGGTCGAGTGGGCGAGGCCTTTGCTTGCGCAAGCATTGGAAACAGGCAACTTTGATGCTCTTGTTGACGTAAGGTTGCAGAATGATTACAACACCAGTGAAATGGCCTCTATGCTTGCTTGCGCTGCTGCTTGCGTGCGTCATTCTGGCCGACGTCGGCCGCGAATGAGCCAGGTGGTTCGAGCATTGGAAGGAAATCTTTCTCCTGATGAGTTAAATGAGGGAATTATACCGGGTCAAAGTACGGTATTCAGTTATGGAAGCTCAGAGTACAATGCTAGTGAGTACAAGGAAGATTTGAATAAATTCAGAAAACTAGCACTAGAAAGCCAAGAGCAAGGGACCAGTGAGAACAGTGGACCTAGCAGTGATTTTGGTCTGCTCCAGTCTACCTCAAGTGGTGAAGGCCAACAAACCACCCAAGAGCTGGAACTCGGGAAAATAAAGAAAAACACCCGAGATCTTGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

568

Amino Acids

61.09

Weight (kDa)

6.42

Isoelectric Point (pI)

53.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	202 - 452	2.8e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	205 - 474	1.1e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001011)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24540 AT3G24550
fragaria_vesca	FvH4_1g04680 FvH4_1g04680 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540
malus_domestica	MD02G1045800.v1.1 MD15G1184000.v1.1 MD15G1318900.v1.1 MD17G1193400.v1.1
prunus_persica	Prupe.3G068800_v2.0.a1 Prupe.7G232200_v2.0.a1
pyrus_communis	pycom02g03820 pycom09g12790 pycom15g16560 pycom17g19940
rosa_chinensis	RchiOBHm_Chr2g0090291 RchiOBHm_Chr2g0138371 RchiOBHm_Chr2g0138381 RchiOBHm_Chr2g0138481 RchiOBHm_Chr2g0138511 RchiOBHm_Chr2g0138521 RchiOBHm_Chr2g0138601 RchiOBHm_Chr6g0297471
rosa_laevigata	RLG00000016095 RLG00000019740 RLG00000019744 RLG00000019747
rosa_multiflora	Rmu_co8232347.1_g000001 Rmu_co8362561.1_g000001 Rmu_sc0000436.1_g000004 Rmu_sc0001534.1_g000011 Rmu_sc0006235.1_g000002 Rmu_sc0008467.1_g000011 Rmu_sc0012206.1_g000004
rosa_roxburghii	Rroxscaffold_2G00106070 Rroxscaffold_2G00106140 Rroxscaffold_2G00106150 Rroxscaffold_2G00106280 Rroxscaffold_2G00151310
rosa_rugosa	Rorug02G0006300 Rorug02G0351700 Rorug06G0272400
rosa_samantha	Rh2AG052200 Rh2AG400100 Rh2AG400200 Rh2AG400800 Rh2CG386300 Rh2DG052100 Rh2DG419800 Rh2DG419900 Rh2DG420100 Rh2DG420600 Rh2DG421200
rosa_wichuraiana	Rw2G004470 Rw2G032550 Rw2G032580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	61
AatII	GACGTC	1 cut(s)	1390
Acc16I	TGCGCA	1 cut(s)	1263
Acc36I	ACCTGC	2 cut(s)	61, 208
AccB1I	GGYRCC	1 cut(s)	7
AccB7I	CCANNNNNTGG	1 cut(s)	1660
AccI	GTMKAC	1 cut(s)	1622
AccII	CGCG	3 cut(s)	101, 179, 1396
AciI	CCGC	9 cut(s)	63, 99, 143, 177, 185, 194, 328, 1125, 1394
AclWI	GGATC	1 cut(s)	556
AcoI	YGGCCR	3 cut(s)	887, 1381, 1391
AcsI	RAATTY	3 cut(s)	722, 848, 1538
AcyI	GRCGYC	3 cut(s)	8, 1192, 1387
AfaI	GTAC	6 cut(s)	277, 471, 1170, 1477, 1505, 1520
AfiI	CCNNNNNNNGG	3 cut(s)	238, 239, 1660
AgsI	TTSAA	5 cut(s)	480, 486, 740, 901, 1534
AhlI	ACTAGT	1 cut(s)	488
AjiI	CACGTC	1 cut(s)	33
AjnI	CCWGG	2 cut(s)	843, 1404
AjuI	GAANNNNNNNTTGG	4 cut(s)	97, 129, 221, 253
AluBI	AGCT	8 cut(s)	498, 691, 698, 986, 1106, 1132, 1497, 1660
AluI	AGCT	8 cut(s)	498, 691, 698, 986, 1106, 1132, 1497, 1660
Alw26I	GTCTC	3 cut(s)	18, 186, 865
AlwI	GGATC	1 cut(s)	556
Ama87I	CYCGRG	2 cut(s)	1667, 1689
AoxI	GGCC	6 cut(s)	887, 1250, 1338, 1381, 1391, 1639
ApeKI	GCWGC	5 cut(s)	495, 688, 983, 1358, 1361
ApoI	RAATTY	3 cut(s)	722, 848, 1538
Asp700I	GAANNNNTTC	3 cut(s)	444, 1432, 1538
AspA2I	CCTAGG	1 cut(s)	910
AspLEI	GCGC	6 cut(s)	10, 103, 172, 343, 1264, 1358
AspS9I	GGNCC	4 cut(s)	389, 802, 1575, 1592
AsuC2I	CCSGG	2 cut(s)	216, 1467
AsuHPI	GGTGA	4 cut(s)	42, 63, 169, 1646
AvaI	CYCGRG	2 cut(s)	1667, 1689
AvaII	GGWCC	4 cut(s)	389, 802, 1575, 1592
AvrII	CCTAGG	1 cut(s)	910
BaeI	ACNNNNGTAYC	2 cut(s)	1053, 1086
BalI	TGGCCA	1 cut(s)	889
BanI	GGYRCC	1 cut(s)	7
BanII	GRGCYC	1 cut(s)	506
BbvI	GCAGC	5 cut(s)	507, 700, 995, 1345, 1348
BccI	CCATC	3 cut(s)	481, 580, 765
BcgI	CGANNNNNNTGC	2 cut(s)	1237, 1271
BciT130I	CCWGG	2 cut(s)	845, 1406
BciVI	GTATCC	1 cut(s)	779
BclI	TGATCA	1 cut(s)	1000
BcnI	CCSGG	2 cut(s)	216, 1467
BcoDI	GTCTC	3 cut(s)	18, 186, 865
BcuI	ACTAGT	1 cut(s)	488
BfaI	CTAG	8 cut(s)	489, 894, 911, 1122, 1512, 1550, 1556, 1596
BfmI	CTRYAG	1 cut(s)	310
BfoI	RGCGCY	2 cut(s)	11, 173
BfuAI	ACCTGC	2 cut(s)	61, 208
BfuI	GTATCC	1 cut(s)	779
BglII	AGATCT	1 cut(s)	1693
BisI	GCNGC	7 cut(s)	329, 496, 689, 984, 1359, 1362, 1394
BlnI	CCTAGG	1 cut(s)	910
BlsI	GCNGC	7 cut(s)	330, 497, 690, 985, 1360, 1363, 1395
Bme1390I	CCNGG	4 cut(s)	216, 845, 1406, 1467
Bme18I	GGWCC	4 cut(s)	389, 802, 1575, 1592
BmeT110I	CYCGRG	2 cut(s)	1667, 1689
BmgBI	CACGTC	1 cut(s)	33
BmgT120I	GGNCC	4 cut(s)	389, 802, 1575, 1592
BmiI	GGNNCC	3 cut(s)	9, 803, 1576
BmrFI	CCNGG	4 cut(s)	216, 845, 1406, 1467
BmrI	ACTGGG	1 cut(s)	461
BmsI	GCATC	3 cut(s)	536, 1127, 1279
BmuI	ACTGGG	1 cut(s)	461
BpmI	CTGGAG	1 cut(s)	1601
BpuEI	CTTGAG	1 cut(s)	1612
BpuMI	CCSGG	2 cut(s)	216, 1467
BsaHI	GRCGYC	3 cut(s)	8, 1192, 1387
BsaI	GGTCTC	1 cut(s)	865
BsaJI	CCNNGG	3 cut(s)	619, 843, 910
BsaXI	ACNNNNNCTCC	6 cut(s)	22, 52, 124, 154, 166, 196
Bsc4I	CCNNNNNNNGG	3 cut(s)	238, 239, 1660
Bse1I	ACTGG	6 cut(s)	467, 783, 1192, 1329, 1578, 1618
BseBI	CCWGG	2 cut(s)	845, 1406
BseDI	CCNNGG	3 cut(s)	619, 843, 910
BseGI	GGATG	1 cut(s)	460
BseLI	CCNNNNNNNGG	3 cut(s)	238, 239, 1660
BseMII	CTCAG	5 cut(s)	410, 498, 534, 1128, 1512
BseNI	ACTGG	6 cut(s)	467, 783, 1192, 1329, 1578, 1618
BseRI	GAGGAG	5 cut(s)	30, 33, 69, 99, 138
BseX3I	CGGCCG	1 cut(s)	1391
BseXI	GCAGC	5 cut(s)	507, 700, 995, 1345, 1348
BseYI	CCCAGC	1 cut(s)	698
Bsh1236I	CGCG	3 cut(s)	101, 179, 1396
Bsh1285I	CGRYCG	2 cut(s)	177, 1394
BshFI	GGCC	6 cut(s)	889, 1252, 1340, 1383, 1393, 1641
BshNI	GGYRCC	1 cut(s)	7
BsiEI	CGRYCG	2 cut(s)	177, 1394
BsiHKCI	CYCGRG	2 cut(s)	1667, 1689
BsiSI	CCGG	3 cut(s)	17, 215, 1466
BslFI	GGGAC	1 cut(s)	1588
BslI	CCNNNNNNNGG	3 cut(s)	238, 239, 1660
BsmAI	GTCTC	3 cut(s)	18, 186, 865
BsmBI	CGTCTC	2 cut(s)	18, 186
BsmFI	GGGAC	1 cut(s)	1588
BsnI	GGCC	6 cut(s)	889, 1252, 1340, 1383, 1393, 1641
Bso31I	GGTCTC	1 cut(s)	865
BsoBI	CYCGRG	2 cut(s)	1667, 1689
Bsp1286I	GDGCHC	1 cut(s)	506
Bsp143I	GATC	4 cut(s)	548, 960, 1000, 1693
BspACI	CCGC	9 cut(s)	63, 99, 143, 177, 185, 194, 328, 1125, 1394
BspANI	GGCC	6 cut(s)	889, 1252, 1340, 1383, 1393, 1641
BspCNI	CTCAG	5 cut(s)	409, 499, 533, 1129, 1511
BspFNI	CGCG	3 cut(s)	101, 179, 1396
BspLI	GGNNCC	3 cut(s)	9, 803, 1576
BspMI	ACCTGC	2 cut(s)	61, 208
BspPI	GGATC	1 cut(s)	556
BspT107I	GGYRCC	1 cut(s)	7
BspTNI	GGTCTC	1 cut(s)	865
BsrI	ACTGG	6 cut(s)	467, 783, 1192, 1329, 1578, 1618
BssECI	CCNNGG	3 cut(s)	619, 843, 910
BssMI	GATC	4 cut(s)	548, 960, 1000, 1693
BssNI	GRCGYC	3 cut(s)	8, 1192, 1387
BssT1I	CCWWGG	2 cut(s)	619, 910
Bst2UI	CCWGG	2 cut(s)	845, 1406
Bst4CI	ACNGT	6 cut(s)	157, 444, 950, 971, 1480, 1589
BstACI	GRCGYC	3 cut(s)	8, 1192, 1387
BstAPI	GCANNNNNTGC	1 cut(s)	1022
BstC8I	GCNNGC	7 cut(s)	333, 1260, 1266, 1350, 1354, 1366, 1370
BstDEI	CTNAG	6 cut(s)	396, 507, 520, 1102, 1137, 1498
BstF5I	GGATG	1 cut(s)	460
BstFNI	CGCG	3 cut(s)	101, 179, 1396
BstH2I	RGCGCY	2 cut(s)	11, 173
BstHHI	GCGC	6 cut(s)	10, 103, 172, 343, 1264, 1358
BstKTI	GATC	4 cut(s)	551, 963, 1003, 1696
BstMAI	GTCTC	3 cut(s)	18, 186, 865
BstMBI	GATC	4 cut(s)	548, 960, 1000, 1693
BstMCI	CGRYCG	2 cut(s)	177, 1394
BstMWI	GCNNNNNNNGC	9 cut(s)	62, 176, 193, 220, 325, 501, 715, 1022, 1358
BstNI	CCWGG	2 cut(s)	845, 1406
BstSCI	CCNGG	4 cut(s)	214, 843, 1404, 1465
BstSFI	CTRYAG	1 cut(s)	310
BstUI	CGCG	3 cut(s)	101, 179, 1396
BstV1I	GCAGC	5 cut(s)	507, 700, 995, 1345, 1348
BstX2I	RGATCY	1 cut(s)	1693
BstXI	CCANNNNNNTGG	1 cut(s)	1336
BstYI	RGATCY	1 cut(s)	1693
BstZI	CGGCCG	1 cut(s)	1391
BsuI	GTATCC	1 cut(s)	779
BsuRI	GGCC	6 cut(s)	889, 1252, 1340, 1383, 1393, 1641
BtgZI	GCGATG	1 cut(s)	599
BtrI	CACGTC	1 cut(s)	33
BtsCI	GGATG	1 cut(s)	460
BtsI	GCAGTG	1 cut(s)	1606
BtsIMutI	CAGTG	7 cut(s)	776, 1134, 1221, 1336, 1585, 1594, 1606
BveI	ACCTGC	2 cut(s)	61, 208
Cac8I	GCNNGC	7 cut(s)	333, 1260, 1266, 1350, 1354, 1366, 1370
CfoI	GCGC	6 cut(s)	10, 103, 172, 343, 1264, 1358
Cfr13I	GGNCC	4 cut(s)	389, 802, 1575, 1592
CseI	GACGC	5 cut(s)	153, 168, 192, 1200, 1361
Csp6I	GTAC	6 cut(s)	276, 470, 1169, 1476, 1504, 1519
CviAII	CATG	5 cut(s)	860, 941, 1067, 1084, 1234
CviQI	GTAC	6 cut(s)	276, 470, 1169, 1476, 1504, 1519
DdeI	CTNAG	6 cut(s)	396, 507, 520, 1102, 1137, 1498
DinI	GGCGCC	1 cut(s)	9
DpnI	GATC	4 cut(s)	550, 962, 1002, 1695
DpnII	GATC	4 cut(s)	548, 960, 1000, 1693
EaeI	YGGCCR	3 cut(s)	887, 1381, 1391
EagI	CGGCCG	1 cut(s)	1391
EciI	GGCGGA	2 cut(s)	132, 174
EclXI	CGGCCG	1 cut(s)	1391
Eco130I	CCWWGG	2 cut(s)	619, 910
Eco147I	AGGCCT	1 cut(s)	1252
Eco24I	GRGCYC	1 cut(s)	506
Eco31I	GGTCTC	1 cut(s)	865
Eco47I	GGWCC	4 cut(s)	389, 802, 1575, 1592
Eco52I	CGGCCG	1 cut(s)	1391
Eco88I	CYCGRG	2 cut(s)	1667, 1689
EcoRI	GAATTC	1 cut(s)	722
EcoRII	CCWGG	2 cut(s)	843, 1404
EcoT14I	CCWWGG	2 cut(s)	619, 910
EcoT22I	ATGCAT	1 cut(s)	1120
EcoT38I	GRGCYC	1 cut(s)	506
EgeI	GGCGCC	1 cut(s)	9
EheI	GGCGCC	1 cut(s)	9
ErhI	CCWWGG	2 cut(s)	619, 910
Esp3I	CGTCTC	2 cut(s)	18, 186
FaeI	CATG	5 cut(s)	863, 944, 1070, 1087, 1237
FalI	AAGNNNNNCTT	2 cut(s)	1416, 1448
FaqI	GGGAC	1 cut(s)	1588
FatI	CATG	5 cut(s)	859, 940, 1066, 1083, 1233
FbaI	TGATCA	1 cut(s)	1000
FblI	GTMKAC	1 cut(s)	1622
Fnu4HI	GCNGC	7 cut(s)	329, 496, 689, 984, 1359, 1362, 1394
FokI	GGATG	1 cut(s)	447
FriOI	GRGCYC	1 cut(s)	506
Fsp4HI	GCNGC	7 cut(s)	329, 496, 689, 984, 1359, 1362, 1394
FspBI	CTAG	8 cut(s)	489, 894, 911, 1122, 1512, 1550, 1556, 1596
FspI	TGCGCA	1 cut(s)	1263
GlaI	GCGC	6 cut(s)	9, 102, 171, 342, 1263, 1357
GluI	GCNGC	7 cut(s)	329, 496, 689, 984, 1359, 1362, 1394
GsaI	CCCAGC	1 cut(s)	702
GsuI	CTGGAG	1 cut(s)	1601
HaeII	RGCGCY	2 cut(s)	11, 173
HaeIII	GGCC	6 cut(s)	889, 1252, 1340, 1383, 1393, 1641
HapII	CCGG	3 cut(s)	17, 215, 1466
HgaI	GACGC	5 cut(s)	153, 168, 192, 1200, 1361
HhaI	GCGC	6 cut(s)	10, 103, 172, 343, 1264, 1358
Hin1I	GRCGYC	3 cut(s)	8, 1192, 1387
Hin1II	CATG	5 cut(s)	863, 944, 1070, 1087, 1237
Hin6I	GCGC	6 cut(s)	8, 101, 170, 341, 1262, 1356
HinP1I	GCGC	6 cut(s)	8, 101, 170, 341, 1262, 1356
HincII	GTYRAC	2 cut(s)	953, 1300
HindII	GTYRAC	2 cut(s)	953, 1300
HinfI	GANTC	3 cut(s)	128, 347, 654
HpaII	CCGG	3 cut(s)	17, 215, 1466
HphI	GGTGA	4 cut(s)	42, 63, 169, 1646
Hpy166II	GTNNAC	6 cut(s)	392, 820, 953, 1300, 1592, 1623
Hpy188I	TCNGA	4 cut(s)	508, 1147, 1501, 1544
Hpy188III	TCNNGA	7 cut(s)	362, 805, 998, 1109, 1439, 1669, 1697
Hpy8I	GTNNAC	6 cut(s)	392, 820, 953, 1300, 1592, 1623
Hpy99I	CGWCG	5 cut(s)	37, 121, 229, 1389, 1392
HpyAV	CCTTC	7 cut(s)	57, 123, 147, 309, 1228, 1418, 1631
HpyCH4III	ACNGT	6 cut(s)	157, 444, 950, 971, 1480, 1589
HpyCH4IV	ACGT	3 cut(s)	32, 1302, 1387
HpyCH4V	TGCA	8 cut(s)	406, 680, 792, 859, 920, 1025, 1118, 1312
HpyF10VI	GCNNNNNNNGC	9 cut(s)	62, 176, 193, 220, 325, 501, 715, 1022, 1358
HpyF3I	CTNAG	6 cut(s)	396, 507, 520, 1102, 1137, 1498
HpySE526I	ACGT	3 cut(s)	32, 1302, 1387
Hsp92I	GRCGYC	3 cut(s)	8, 1192, 1387
Hsp92II	CATG	5 cut(s)	863, 944, 1070, 1087, 1237
HspAI	GCGC	6 cut(s)	8, 101, 170, 341, 1262, 1356
KasI	GGCGCC	1 cut(s)	7
Ksp22I	TGATCA	1 cut(s)	1000
Kzo9I	GATC	4 cut(s)	548, 960, 1000, 1693
LmnI	GCTCC	3 cut(s)	715, 1111, 1620
Lsp1109I	GCAGC	5 cut(s)	507, 700, 995, 1345, 1348
LweI	GCATC	3 cut(s)	536, 1127, 1279
MaeI	CTAG	8 cut(s)	489, 894, 911, 1122, 1512, 1550, 1556, 1596
MaeII	ACGT	3 cut(s)	32, 1302, 1387
MaeIII	GTNAC	4 cut(s)	157, 552, 971, 1097
MalI	GATC	4 cut(s)	550, 962, 1002, 1695
MboI	GATC	4 cut(s)	548, 960, 1000, 1693
MboII	GAAGA	6 cut(s)	292, 377, 468, 587, 986, 1538
MflI	RGATCY	1 cut(s)	1693
MhlI	GDGCHC	1 cut(s)	506
MlsI	TGGCCA	1 cut(s)	889
MluCI	AATT	8 cut(s)	208, 412, 578, 681, 722, 848, 1458, 1538
MluNI	TGGCCA	1 cut(s)	889
Mly113I	GGCGCC	1 cut(s)	8
MlyI	GAGTC	3 cut(s)	122, 356, 663
MmeI	TCCRAC	2 cut(s)	176, 763
Mox20I	TGGCCA	1 cut(s)	889
Mph1103I	ATGCAT	1 cut(s)	1120
MroXI	GAANNNNTTC	3 cut(s)	444, 1432, 1538
MscI	TGGCCA	1 cut(s)	889
MseI	TTAA	2 cut(s)	684, 1448
MslI	CAYNNNNRTG	2 cut(s)	414, 858
Msp20I	TGGCCA	1 cut(s)	889
MspA1I	CMGCKG	1 cut(s)	691
MspI	CCGG	3 cut(s)	17, 215, 1466
MspR9I	CCNGG	4 cut(s)	216, 845, 1406, 1467
MvaI	CCWGG	2 cut(s)	845, 1406
MvnI	CGCG	3 cut(s)	101, 179, 1396
MwoI	GCNNNNNNNGC	9 cut(s)	62, 176, 193, 220, 325, 501, 715, 1022, 1358
NarI	GGCGCC	1 cut(s)	8
NciI	CCSGG	2 cut(s)	216, 1467
NdeII	GATC	4 cut(s)	548, 960, 1000, 1693
NlaIII	CATG	5 cut(s)	863, 944, 1070, 1087, 1237
NlaIV	GGNNCC	3 cut(s)	9, 803, 1576
NmuCI	GTSAC	3 cut(s)	157, 552, 971
NsbI	TGCGCA	1 cut(s)	1263
NsiI	ATGCAT	1 cut(s)	1120
PaqCI	CACCTGC	1 cut(s)	61
PceI	AGGCCT	1 cut(s)	1252
PcsI	WCGNNNNNNNCGW	2 cut(s)	161, 1393
PdmI	GAANNNNTTC	3 cut(s)	444, 1432, 1538
PflFI	GACNNNGTC	2 cut(s)	163, 178
PflMI	CCANNNNNTGG	1 cut(s)	1660
PkrI	GCNGC	7 cut(s)	330, 497, 690, 985, 1360, 1363, 1395
PleI	GAGTC	3 cut(s)	122, 355, 662
PluTI	GGCGCC	1 cut(s)	11
PpsI	GAGTC	3 cut(s)	122, 355, 662
Psp6I	CCWGG	2 cut(s)	843, 1404
PspFI	CCCAGC	1 cut(s)	698
PspGI	CCWGG	2 cut(s)	843, 1404
PspN4I	GGNNCC	3 cut(s)	9, 803, 1576
PspPI	GGNCC	4 cut(s)	389, 802, 1575, 1592
PsuI	RGATCY	1 cut(s)	1693
PsyI	GACNNNGTC	2 cut(s)	163, 178
PvuII	CAGCTG	1 cut(s)	691
RsaI	GTAC	6 cut(s)	277, 471, 1170, 1477, 1505, 1520
RsaNI	GTAC	6 cut(s)	276, 470, 1169, 1476, 1504, 1519
RseI	CAYNNNNRTG	2 cut(s)	414, 858
SaqAI	TTAA	2 cut(s)	684, 1448
SatI	GCNGC	7 cut(s)	329, 496, 689, 984, 1359, 1362, 1394
Sau3AI	GATC	4 cut(s)	548, 960, 1000, 1693
Sau96I	GGNCC	4 cut(s)	389, 802, 1575, 1592
SchI	GAGTC	3 cut(s)	122, 356, 663
ScrFI	CCNGG	4 cut(s)	216, 845, 1406, 1467
SduI	GDGCHC	1 cut(s)	506
SfaNI	GCATC	3 cut(s)	536, 1127, 1279
SfcI	CTRYAG	1 cut(s)	310
SfoI	GGCGCC	1 cut(s)	9
SinI	GGWCC	4 cut(s)	389, 802, 1575, 1592
SmiMI	CAYNNNNRTG	2 cut(s)	414, 858
SmlI	CTYRAG	2 cut(s)	1627, 1697
SmoI	CTYRAG	2 cut(s)	1627, 1697
SpeI	ACTAGT	1 cut(s)	488
Sse9I	AATT	8 cut(s)	208, 412, 578, 681, 722, 848, 1458, 1538
SseBI	AGGCCT	1 cut(s)	1252
SsiI	CCGC	9 cut(s)	63, 99, 143, 177, 185, 194, 328, 1125, 1394
SspDI	GGCGCC	1 cut(s)	7
SspI	AATATT	1 cut(s)	991
SspMI	CTAG	8 cut(s)	489, 894, 911, 1122, 1512, 1550, 1556, 1596
StuI	AGGCCT	1 cut(s)	1252
StyD4I	CCNGG	4 cut(s)	214, 843, 1404, 1465
StyI	CCWWGG	2 cut(s)	619, 910
TaaI	ACNGT	6 cut(s)	157, 444, 950, 971, 1480, 1589
TaiI	ACGT	3 cut(s)	35, 1305, 1390
TaqI	TCGA	3 cut(s)	116, 1239, 1414
TasI	AATT	8 cut(s)	208, 412, 578, 681, 722, 848, 1458, 1538
TatI	WGTACW	3 cut(s)	1168, 1503, 1518
TauI	GCSGC	2 cut(s)	331, 1396
Tru1I	TTAA	2 cut(s)	684, 1448
Tru9I	TTAA	2 cut(s)	684, 1448
TscAI	CASTG	7 cut(s)	783, 1141, 1228, 1336, 1585, 1594, 1606
TseFI	GTSAC	3 cut(s)	157, 552, 971
TseI	GCWGC	5 cut(s)	495, 688, 983, 1358, 1361
Tsp45I	GTSAC	3 cut(s)	157, 552, 971
TspDTI	ATGAA	2 cut(s)	635, 842
TspRI	CASTG	7 cut(s)	783, 1141, 1228, 1336, 1585, 1594, 1606
Tth111I	GACNNNGTC	2 cut(s)	163, 178
Van91I	CCANNNNNTGG	1 cut(s)	1660
VpaK11BI	GGWCC	4 cut(s)	389, 802, 1575, 1592
XapI	RAATTY	3 cut(s)	722, 848, 1538
XcmI	CCANNNNNNNNNTGG	3 cut(s)	882, 1081, 1657
XmaJI	CCTAGG	1 cut(s)	910
XmiI	GTMKAC	1 cut(s)	1622
XmnI	GAANNNNTTC	3 cut(s)	444, 1432, 1538
XspI	CTAG	8 cut(s)	489, 894, 911, 1122, 1512, 1550, 1556, 1596
ZraI	GACGTC	1 cut(s)	1388
Zsp2I	ATGCAT	1 cut(s)	1120

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.