Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0001011

Physical Location & Seq

Genomic Coordinates Reverse (-)

11607507 .. 11611527

Gene Structure 4021 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g16560.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGTCGGCTCCGGCGCCGTCGACCAACACAACCTCGCCACCACCACCCACAGCTCCGCCGCCTTCTGCGACTCCGAGCGCACCGCCTCCATCGACTCCGAGTGCACCGCCACCAGCGACACCGAGCGCGCCACCACCAGCCACTCCGTCGTCACCACCACCACCGTCTTCGACCACACCCACGCCCACACCACCATCGACAACTCCACCTCCAGCCTCGTCTGCATCTCCGCCGCCGCCGACATCAACCACTCCCTCTCCTCCACCGCCGAAATCAACCACCCCATCTCCTCCACCGCCGAAATCAACCACACCATCTCCTCCGCCGCCGACTGGTTCGGGTTCTACGCCATCTACCCCGTCAAAGAGTCCTCCGCCTCCGCCACAATCGTCTTCGTCGCCGTCGCCACCATCTTCAGGCTTGGACACGGGGGTTATAATCGGGATTGCCATCGGGGCTGTGGCGATCTTACTGGTGCTGAGTCTTCTCTGCATTTGTTGCAGTAAGAAGAAGAAAAGGAGAAGAAGTGATGAAGAGTATTATACGCCTCCGCCGCCGCCTCCTGGGCCCAAAGTTGACCCATACGGTGGTCCGCCGCATGAGTGGCAACAAAATGCTCCTCCGCCTGGTAATCATGCAGTCGCAATGATGCCAAAGCCATCTCCGCCACCACCAGTAGCAGCACGGCCACCACACTCACCACAATATAATCCAAGTCCGGAAGCAGCACCACCACCACCTTTCACAAGCAGCAGTGGAGGTTCTGGTTCCAATTATTCAGGGGGTGATCTACCCCCTCCACCACCTCCACCAGGCTATACCTTGGGATTTTCTAAAAGCACATTCGCATATGAGGAACTAGCATTGGCAACTGAAGGCTTCTCGGATTCCAATCTTCTTGGTCAAGGTGGATTTGGATACGTACACAAAGGAGTCCTTCCAAATGGGAAGGAAGTGGCAGTCAAGCAGCTGAAAGCTGGAAGTGGGCAAGGGGAACGTGAATTCCAGGCAGAAGTTGAAATTATTAGCCGTGTACATCATAGGCATCTTGTTTCACTGGTTGGATATTGCATGACTGGATCCGAGAGACTACTGGTTTATGAGTTTGTTCCCAATAATACTATGGAGTTTCACTTACATGGAAAAGGGCGACCTACCATGGATTGGTCAACAAGACTAAAAATTGCTTTAGGATCTGCCAAAGGAATAGCATATCTTCATGAAGACTGTCATCCAAAAATCATTCATCGTGATATTAAAGCAGCTAATATACTTTTGGATTTCAAGTTTGAGGCAAAGGTTGCGGATTTTGGACTTGCCAAGCTTTCGTCCGATGTTAATACTCACATTTCCACCCGAGTGATGGGAACTTTTGGGTATCTAGCTCCGGAATATGCTTCAAGTGGAAAACTCACCGACAAGTCAGATGTTTACTCCTTTGGTGTTATGCTTTTGGAGTTGATTACTGGACGCCGGCCTGTTGATGCATCTCAAACTTACATGGAGGATAGTTTGGTAGACTGGGCAAGGCCTGTGCTAAATCGAGCGTTGGAAGAAAGAAACTTTGATGAACTGGTTGACCCTAAGCTTCAAAACAGTTACGACCCCAATGAGATGGCTCGCATGGTTGCTTGTGCTGCAGCTTGTGTACGTCATTCTGCACGGCGTCGACCTCGAATGAGTCAGGTTGTCCGAGCTTTAGAGGGCGACGTGTCTCTTTCTGATCTCAACGAAGGAATCCGGCCTGGGCAGAGCAATGTCTATAGCTCTTACGGGAGCTCAGACTACGACACAAGCCAATACAAAGATGACATGAAAAAGTTCAGGAAGATGGCATTGGGAAGCCAGGAGTACGGTGCTAGTAGTGAGTATAGCGCGCCCACAAGTGATTACGGTTTGTATCCATCTGGCTCAAGCAGCGGGGAAGGCCAAAGCCGCCAAACCACCCGAGAAATGGAGTTGGGAAGGATAAAGAAAACCAACCACGGTTTTAGCAGCGGAACCTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 ko05169 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164 map05169

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

670

Amino Acids

70.66

Weight (kDa)

8.28

Isoelectric Point (pI)

68.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001011)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24540 AT3G24550
fragaria_vesca	FvH4_1g04680 FvH4_1g04680 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540
malus_domestica	MD02G1045800.v1.1 MD15G1184000.v1.1 MD15G1318900.v1.1 MD17G1193400.v1.1
prunus_persica	Prupe.3G068800_v2.0.a1 Prupe.7G232200_v2.0.a1
pyrus_communis	pycom02g03820 pycom09g12790 pycom15g16560 pycom17g19940
rosa_chinensis	RchiOBHm_Chr2g0090291 RchiOBHm_Chr2g0138371 RchiOBHm_Chr2g0138381 RchiOBHm_Chr2g0138481 RchiOBHm_Chr2g0138511 RchiOBHm_Chr2g0138521 RchiOBHm_Chr2g0138601 RchiOBHm_Chr6g0297471
rosa_laevigata	RLG00000016095 RLG00000019740 RLG00000019744 RLG00000019747
rosa_multiflora	Rmu_co8232347.1_g000001 Rmu_co8362561.1_g000001 Rmu_sc0000436.1_g000004 Rmu_sc0001534.1_g000011 Rmu_sc0006235.1_g000002 Rmu_sc0008467.1_g000011 Rmu_sc0012206.1_g000004
rosa_roxburghii	Rroxscaffold_2G00106070 Rroxscaffold_2G00106140 Rroxscaffold_2G00106150 Rroxscaffold_2G00106280 Rroxscaffold_2G00151310
rosa_rugosa	Rorug02G0006300 Rorug02G0351700 Rorug06G0272400
rosa_samantha	Rh2AG052200 Rh2AG400100 Rh2AG400200 Rh2AG400800 Rh2CG386300 Rh2DG052100 Rh2DG419800 Rh2DG419900 Rh2DG420100 Rh2DG420600 Rh2DG421200
rosa_wichuraiana	Rw2G004470 Rw2G032550 Rw2G032580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	437
AccB1I	GGYRCC	1 cut(s)	13
AccB7I	CCANNNNNTGG	2 cut(s)	587, 1164
AccI	GTMKAC	3 cut(s)	20, 1518, 1669
AccII	CGCG	2 cut(s)	128, 1877
AccIII	TCCGGA	2 cut(s)	718, 1387
AclWI	GGATC	3 cut(s)	1074, 1087, 1201
AcoI	YGGCCR	1 cut(s)	686
AcsI	RAATTY	1 cut(s)	1001
AcuI	CTGAAG	2 cut(s)	399, 894
AcyI	GRCGYC	3 cut(s)	14, 1471, 1666
AfaI	GTAC	4 cut(s)	924, 1035, 1650, 1853
AfiI	CCNNNNNNNGG	9 cut(s)	332, 416, 563, 587, 626, 812, 1164, 1363, 1954
AflIII	ACRYGT	1 cut(s)	1710
AgsI	TTSAA	4 cut(s)	1019, 1285, 1401, 1592
AjiI	CACGTC	1 cut(s)	1711
AjnI	CCWGG	6 cut(s)	562, 625, 811, 1005, 1744, 1845
AjuI	GAANNNNNNNTTGG	2 cut(s)	1820, 1852
AleI	CACNNNNGTG	1 cut(s)	1358
AloI	GAACNNNNNNTCC	2 cut(s)	987, 1019
Alw21I	GWGCWC	2 cut(s)	106, 1781
Alw26I	GTCTC	2 cut(s)	1081, 1719
Alw44I	GTGCAC	1 cut(s)	102
AlwI	GGATC	3 cut(s)	1074, 1087, 1201
Ama87I	CYCGRG	2 cut(s)	1356, 1947
Aor13HI	TCCGGA	2 cut(s)	718, 1387
AoxI	GGCC	6 cut(s)	566, 686, 1475, 1529, 1742, 1927
ApaI	GGGCCC	1 cut(s)	570
ApaLI	GTGCAC	1 cut(s)	102
ApeKI	GCWGC	9 cut(s)	680, 725, 750, 967, 1262, 1637, 1640, 1917, 1995
ApoI	RAATTY	1 cut(s)	1001
Asp700I	GAANNNNTTC	1 cut(s)	1820
AspLEI	GCGC	6 cut(s)	16, 80, 128, 130, 1877, 1879
AspS9I	GGNCC	3 cut(s)	566, 567, 590
AsuHPI	GGTGA	4 cut(s)	144, 690, 797, 1405
AvaI	CYCGRG	2 cut(s)	1356, 1947
AvaII	GGWCC	1 cut(s)	590
BaeGI	GKGCMC	2 cut(s)	106, 570
BamHI	GGATCC	1 cut(s)	1079
BanI	GGYRCC	1 cut(s)	13
BanII	GRGCYC	2 cut(s)	570, 1781
BbsI	GAAGAC	4 cut(s)	159, 384, 476, 1230
Bbv12I	GWGCWC	2 cut(s)	106, 1781
BbvI	GCAGC	8 cut(s)	692, 737, 762, 979, 1274, 1624, 1652, 1929
BceAI	ACGGC	4 cut(s)	385, 701, 1014, 1679
BciT130I	CCWGG	6 cut(s)	564, 627, 813, 1007, 1746, 1847
BciVI	GTATCC	2 cut(s)	911, 1911
BcoDI	GTCTC	2 cut(s)	1081, 1719
BfaI	CTAG	3 cut(s)	860, 1382, 1860
BfmI	CTRYAG	2 cut(s)	1638, 1762
BfoI	RGCGCY	1 cut(s)	17
BfuI	GTATCC	2 cut(s)	911, 1911
BglI	GCCNNNNNGGC	2 cut(s)	455, 565
Bme1390I	CCNGG	6 cut(s)	564, 627, 813, 1007, 1746, 1847
Bme18I	GGWCC	1 cut(s)	590
BmeT110I	CYCGRG	2 cut(s)	1356, 1947
BmgBI	CACGTC	1 cut(s)	1711
BmgT120I	GGNCC	3 cut(s)	566, 567, 590
BmiI	GGNNCC	6 cut(s)	9, 15, 568, 769, 1081, 2002
BmrFI	CCNGG	6 cut(s)	564, 627, 813, 1007, 1746, 1847
BmrI	ACTGGG	1 cut(s)	1531
BmsI	GCATC	5 cut(s)	233, 639, 1054, 1474, 1496
BmuI	ACTGGG	1 cut(s)	1531
BpiI	GAAGAC	4 cut(s)	159, 384, 476, 1230
BpmI	CTGGAG	1 cut(s)	195
Bpu10I	CCTNAGC	1 cut(s)	1584
BpuEI	CTTGAG	1 cut(s)	1897
BsaAI	YACGTR	1 cut(s)	922
BsaBI	GATNNNNATC	2 cut(s)	449, 891
BsaHI	GRCGYC	3 cut(s)	14, 1471, 1666
BsaJI	CCNNGG	5 cut(s)	563, 822, 1158, 1745, 1984
BsaWI	WCCGGW	2 cut(s)	718, 1387
Bsc4I	CCNNNNNNNGG	9 cut(s)	332, 416, 563, 587, 626, 812, 1164, 1363, 1954
Bse118I	RCCGGY	1 cut(s)	1473
Bse1I	ACTGG	9 cut(s)	337, 477, 674, 1062, 1081, 1098, 1471, 1526, 1578
Bse3DI	GCAATG	2 cut(s)	651, 1762
Bse8I	GATNNNNATC	2 cut(s)	449, 891
BseAI	TCCGGA	2 cut(s)	718, 1387
BseBI	CCWGG	6 cut(s)	564, 627, 813, 1007, 1746, 1847
BseDI	CCNNGG	5 cut(s)	563, 822, 1158, 1745, 1984
BseGI	GGATG	1 cut(s)	1231
BseJI	GATNNNNATC	2 cut(s)	449, 891
BseLI	CCNNNNNNNGG	9 cut(s)	332, 416, 563, 587, 626, 812, 1164, 1363, 1954
BseMI	GCAATG	2 cut(s)	651, 1762
BseMII	CTCAG	2 cut(s)	470, 1794
BseNI	ACTGG	9 cut(s)	337, 477, 674, 1062, 1081, 1098, 1471, 1526, 1578
BsePI	GCGCGC	2 cut(s)	126, 1875
BseRI	GAGGAG	4 cut(s)	249, 279, 309, 609
BseSI	GKGCMC	2 cut(s)	106, 570
BseXI	GCAGC	8 cut(s)	692, 737, 762, 979, 1274, 1624, 1652, 1929
BsgI	GTGCAG	1 cut(s)	1644
Bsh1236I	CGCG	2 cut(s)	128, 1877
BshFI	GGCC	6 cut(s)	568, 688, 1477, 1531, 1744, 1929
BshNI	GGYRCC	1 cut(s)	13
BsiHKAI	GWGCWC	2 cut(s)	106, 1781
BsiHKCI	CYCGRG	2 cut(s)	1356, 1947
BsiSI	CCGG	5 cut(s)	11, 719, 1388, 1474, 1741
BslI	CCNNNNNNNGG	9 cut(s)	332, 416, 563, 587, 626, 812, 1164, 1363, 1954
BsmAI	GTCTC	2 cut(s)	1081, 1719
BsnI	GGCC	6 cut(s)	568, 688, 1477, 1531, 1744, 1929
BsoBI	CYCGRG	2 cut(s)	1356, 1947
Bsp120I	GGGCCC	1 cut(s)	566
Bsp1286I	GDGCHC	3 cut(s)	106, 570, 1781
Bsp13I	TCCGGA	2 cut(s)	718, 1387
Bsp1407I	TGTACA	1 cut(s)	1033
Bsp143I	GATC	5 cut(s)	465, 787, 1079, 1193, 1723
Bsp19I	CCATGG	1 cut(s)	1158
BspANI	GGCC	6 cut(s)	568, 688, 1477, 1531, 1744, 1929
BspCNI	CTCAG	2 cut(s)	471, 1793
BspEI	TCCGGA	2 cut(s)	718, 1387
BspFNI	CGCG	2 cut(s)	128, 1877
BspHI	TCATGA	1 cut(s)	1219
BspLI	GGNNCC	6 cut(s)	9, 15, 568, 769, 1081, 2002
BspMAI	CTGCAG	1 cut(s)	1642
BspPI	GGATC	3 cut(s)	1074, 1087, 1201
BspT107I	GGYRCC	1 cut(s)	13
BsrDI	GCAATG	2 cut(s)	651, 1762
BsrFI	RCCGGY	1 cut(s)	1473
BsrGI	TGTACA	1 cut(s)	1033
BsrI	ACTGG	9 cut(s)	337, 477, 674, 1062, 1081, 1098, 1471, 1526, 1578
BssAI	RCCGGY	1 cut(s)	1473
BssECI	CCNNGG	5 cut(s)	563, 822, 1158, 1745, 1984
BssHII	GCGCGC	2 cut(s)	126, 1875
BssMI	GATC	5 cut(s)	465, 787, 1079, 1193, 1723
BssNI	GRCGYC	3 cut(s)	14, 1471, 1666
BssT1I	CCWWGG	2 cut(s)	822, 1158
Bst2UI	CCWGG	6 cut(s)	564, 627, 813, 1007, 1746, 1847
Bst4CI	ACNGT	7 cut(s)	165, 587, 1229, 1598, 1856, 1895, 1988
Bst6I	CTCTTC	1 cut(s)	528
BstACI	GRCGYC	3 cut(s)	14, 1471, 1666
BstAPI	GCANNNNNTGC	2 cut(s)	498, 1301
BstAUI	TGTACA	1 cut(s)	1033
BstBAI	YACGTR	1 cut(s)	922
BstC8I	GCNNGC	4 cut(s)	128, 1475, 1621, 1877
BstDEI	CTNAG	3 cut(s)	479, 1584, 1780
BstDSI	CCRYGG	2 cut(s)	1158, 1984
BstENI	CCTNNNNNAGG	1 cut(s)	810
BstF5I	GGATG	1 cut(s)	1231
BstFNI	CGCG	2 cut(s)	128, 1877
BstH2I	RGCGCY	1 cut(s)	17
BstHHI	GCGC	6 cut(s)	16, 80, 128, 130, 1877, 1879
BstKTI	GATC	5 cut(s)	468, 790, 1082, 1196, 1726
BstMAI	GTCTC	2 cut(s)	1081, 1719
BstMBI	GATC	5 cut(s)	465, 787, 1079, 1193, 1723
BstNI	CCWGG	6 cut(s)	564, 627, 813, 1007, 1746, 1847
BstSCI	CCNGG	6 cut(s)	562, 625, 811, 1005, 1744, 1845
BstSFI	CTRYAG	2 cut(s)	1638, 1762
BstSLI	GKGCMC	2 cut(s)	106, 570
BstSNI	TACGTA	1 cut(s)	922
BstUI	CGCG	2 cut(s)	128, 1877
BstV1I	GCAGC	8 cut(s)	692, 737, 762, 979, 1274, 1624, 1652, 1929
BstV2I	GAAGAC	4 cut(s)	159, 384, 476, 1230
BstX2I	RGATCY	2 cut(s)	1079, 1193
BstXI	CCANNNNNNTGG	1 cut(s)	1615
BstYI	RGATCY	2 cut(s)	1079, 1193
BsuI	GTATCC	2 cut(s)	911, 1911
BsuRI	GGCC	6 cut(s)	568, 688, 1477, 1531, 1744, 1929
BtgI	CCRYGG	2 cut(s)	1158, 1984
BtrI	CACGTC	1 cut(s)	1711
BtsCI	GGATG	1 cut(s)	1231
BtsI	GCAGTG	1 cut(s)	760
BtsIMutI	CAGTG	2 cut(s)	760, 1055
Cac8I	GCNNGC	4 cut(s)	128, 1475, 1621, 1877
CciI	TCATGA	1 cut(s)	1219
CfoI	GCGC	6 cut(s)	16, 80, 128, 130, 1877, 1879
Cfr10I	RCCGGY	1 cut(s)	1473
Cfr13I	GGNCC	3 cut(s)	566, 567, 590
CseI	GACGC	2 cut(s)	1479, 1655
Csp6I	GTAC	4 cut(s)	923, 1034, 1649, 1852
CviAII	CATG	9 cut(s)	599, 635, 1072, 1139, 1159, 1220, 1501, 1624, 1813
CviQI	GTAC	4 cut(s)	923, 1034, 1649, 1852
DdeI	CTNAG	3 cut(s)	479, 1584, 1780
DinI	GGCGCC	1 cut(s)	15
DpnI	GATC	5 cut(s)	467, 789, 1081, 1195, 1725
DpnII	GATC	5 cut(s)	465, 787, 1079, 1193, 1723
EaeI	YGGCCR	1 cut(s)	686
Eam1104I	CTCTTC	1 cut(s)	528
EarI	CTCTTC	1 cut(s)	528
EciI	GGCGGA	9 cut(s)	45, 219, 312, 363, 369, 540, 582, 612, 654
Ecl136II	GAGCTC	1 cut(s)	1779
Eco105I	TACGTA	1 cut(s)	922
Eco130I	CCWWGG	2 cut(s)	822, 1158
Eco147I	AGGCCT	1 cut(s)	1531
Eco24I	GRGCYC	2 cut(s)	570, 1781
Eco47I	GGWCC	1 cut(s)	590
Eco53kI	GAGCTC	1 cut(s)	1779
Eco57I	CTGAAG	2 cut(s)	399, 894
Eco88I	CYCGRG	2 cut(s)	1356, 1947
EcoICRI	GAGCTC	1 cut(s)	1779
EcoNI	CCTNNNNNAGG	1 cut(s)	810
EcoRI	GAATTC	1 cut(s)	1001
EcoRII	CCWGG	6 cut(s)	562, 625, 811, 1005, 1744, 1845
EcoT14I	CCWWGG	2 cut(s)	822, 1158
EcoT22I	ATGCAT	1 cut(s)	1489
EcoT38I	GRGCYC	2 cut(s)	570, 1781
EgeI	GGCGCC	1 cut(s)	15
EheI	GGCGCC	1 cut(s)	15
ErhI	CCWWGG	2 cut(s)	822, 1158
FaeI	CATG	9 cut(s)	602, 638, 1075, 1142, 1162, 1223, 1504, 1627, 1816
FalI	AAGNNNNNCTT	2 cut(s)	921, 953
FatI	CATG	9 cut(s)	598, 634, 1071, 1138, 1158, 1219, 1500, 1623, 1812
FauI	CCCGC	1 cut(s)	1913
FauNDI	CATATG	1 cut(s)	850
FblI	GTMKAC	3 cut(s)	20, 1518, 1669
FokI	GGATG	1 cut(s)	1218
FriOI	GRGCYC	2 cut(s)	570, 1781
FspBI	CTAG	3 cut(s)	860, 1382, 1860
GlaI	GCGC	6 cut(s)	15, 79, 127, 129, 1876, 1878
GsuI	CTGGAG	1 cut(s)	195
HaeII	RGCGCY	1 cut(s)	17
HaeIII	GGCC	6 cut(s)	568, 688, 1477, 1531, 1744, 1929
HapII	CCGG	5 cut(s)	11, 719, 1388, 1474, 1741
HgaI	GACGC	2 cut(s)	1479, 1655
HhaI	GCGC	6 cut(s)	16, 80, 128, 130, 1877, 1879
Hin1I	GRCGYC	3 cut(s)	14, 1471, 1666
Hin1II	CATG	9 cut(s)	602, 638, 1075, 1142, 1162, 1223, 1504, 1627, 1816
Hin6I	GCGC	6 cut(s)	14, 78, 126, 128, 1875, 1877
HinP1I	GCGC	6 cut(s)	14, 78, 126, 128, 1875, 1877
HincII	GTYRAC	5 cut(s)	21, 577, 1170, 1579, 1670
HindII	GTYRAC	5 cut(s)	21, 577, 1170, 1579, 1670
HindIII	AAGCTT	2 cut(s)	1322, 1586
HinfI	GANTC	8 cut(s)	70, 94, 367, 481, 887, 933, 1681, 1737
HpaII	CCGG	5 cut(s)	11, 719, 1388, 1474, 1741
HphI	GGTGA	4 cut(s)	144, 690, 797, 1405
Hpy188I	TCNGA	9 cut(s)	75, 99, 886, 1084, 1333, 1426, 1694, 1723, 1783
Hpy188III	TCNNGA	6 cut(s)	442, 719, 1220, 1250, 1388, 1825
Hpy99I	CGWCG	6 cut(s)	22, 151, 400, 406, 1671, 1712
HpyAV	CCTTC	7 cut(s)	72, 869, 943, 947, 1727, 1919, 1959
HpyCH4III	ACNGT	7 cut(s)	165, 587, 1229, 1598, 1856, 1895, 1988
HpyCH4IV	ACGT	4 cut(s)	921, 997, 1651, 1710
HpyCH4V	TGCA	9 cut(s)	104, 224, 492, 501, 638, 1071, 1487, 1640, 1661
HpyF3I	CTNAG	3 cut(s)	479, 1584, 1780
HpySE526I	ACGT	4 cut(s)	921, 997, 1651, 1710
Hsp92I	GRCGYC	3 cut(s)	14, 1471, 1666
Hsp92II	CATG	9 cut(s)	602, 638, 1075, 1142, 1162, 1223, 1504, 1627, 1816
HspAI	GCGC	6 cut(s)	14, 78, 126, 128, 1875, 1877
KasI	GGCGCC	1 cut(s)	13
Kpn2I	TCCGGA	2 cut(s)	718, 1387
KroI	GCCGGC	1 cut(s)	1473
KroNI	GCCGGC	1 cut(s)	1475
Kzo9I	GATC	5 cut(s)	465, 787, 1079, 1193, 1723
LmnI	GCTCC	5 cut(s)	13, 58, 622, 1390, 1776
Lsp1109I	GCAGC	8 cut(s)	692, 737, 762, 979, 1274, 1624, 1652, 1929
LweI	GCATC	5 cut(s)	233, 639, 1054, 1474, 1496
MaeI	CTAG	3 cut(s)	860, 1382, 1860
MaeII	ACGT	4 cut(s)	921, 997, 1651, 1710
MaeIII	GTNAC	2 cut(s)	150, 1598
MalI	GATC	5 cut(s)	467, 789, 1081, 1195, 1725
MboI	GATC	5 cut(s)	465, 787, 1079, 1193, 1723
MflI	RGATCY	2 cut(s)	1079, 1193
MhlI	GDGCHC	3 cut(s)	106, 570, 1781
MluCI	AATT	4 cut(s)	772, 1001, 1020, 1182
Mly113I	GGCGCC	1 cut(s)	14
MlyI	GAGTC	6 cut(s)	64, 88, 376, 490, 942, 1690
MmeI	TCCRAC	2 cut(s)	1042, 1530
Mph1103I	ATGCAT	1 cut(s)	1489
MroI	TCCGGA	2 cut(s)	718, 1387
MroNI	GCCGGC	1 cut(s)	1473
MroXI	GAANNNNTTC	1 cut(s)	1820
MseI	TTAA	3 cut(s)	1257, 1338, 2008
MslI	CAYNNNNRTG	2 cut(s)	1137, 1358
MspA1I	CMGCKG	3 cut(s)	970, 1920, 1998
MspI	CCGG	5 cut(s)	11, 719, 1388, 1474, 1741
MspR9I	CCNGG	6 cut(s)	564, 627, 813, 1007, 1746, 1847
MvaI	CCWGG	6 cut(s)	564, 627, 813, 1007, 1746, 1847
MvnI	CGCG	2 cut(s)	128, 1877
NaeI	GCCGGC	1 cut(s)	1475
NarI	GGCGCC	1 cut(s)	14
NcoI	CCATGG	1 cut(s)	1158
NdeI	CATATG	1 cut(s)	850
NdeII	GATC	5 cut(s)	465, 787, 1079, 1193, 1723
NgoMIV	GCCGGC	1 cut(s)	1473
NlaIII	CATG	9 cut(s)	602, 638, 1075, 1142, 1162, 1223, 1504, 1627, 1816
NlaIV	GGNNCC	6 cut(s)	9, 15, 568, 769, 1081, 2002
NmuCI	GTSAC	1 cut(s)	150
NsiI	ATGCAT	1 cut(s)	1489
OliI	CACNNNNGTG	1 cut(s)	1358
PagI	TCATGA	1 cut(s)	1219
PauI	GCGCGC	2 cut(s)	126, 1875
PceI	AGGCCT	1 cut(s)	1531
PdiI	GCCGGC	1 cut(s)	1475
PdmI	GAANNNNTTC	1 cut(s)	1820
PfeI	GAWTC	2 cut(s)	887, 1737
PflMI	CCANNNNNTGG	2 cut(s)	587, 1164
PleI	GAGTC	6 cut(s)	64, 88, 375, 489, 941, 1689
PluTI	GGCGCC	1 cut(s)	17
PpsI	GAGTC	6 cut(s)	64, 88, 375, 489, 941, 1689
Ppu21I	YACGTR	1 cut(s)	922
PsiI	TTATAA	1 cut(s)	437
Psp124BI	GAGCTC	1 cut(s)	1781
Psp6I	CCWGG	6 cut(s)	562, 625, 811, 1005, 1744, 1845
PspGI	CCWGG	6 cut(s)	562, 625, 811, 1005, 1744, 1845
PspN4I	GGNNCC	6 cut(s)	9, 15, 568, 769, 1081, 2002
PspOMI	GGGCCC	1 cut(s)	566
PspPI	GGNCC	3 cut(s)	566, 567, 590
PstI	CTGCAG	1 cut(s)	1642
PsuI	RGATCY	2 cut(s)	1079, 1193
PteI	GCGCGC	2 cut(s)	126, 1875
PvuII	CAGCTG	1 cut(s)	970
RsaI	GTAC	4 cut(s)	924, 1035, 1650, 1853
RsaNI	GTAC	4 cut(s)	923, 1034, 1649, 1852
RseI	CAYNNNNRTG	2 cut(s)	1137, 1358
SacI	GAGCTC	1 cut(s)	1781
SalI	GTCGAC	2 cut(s)	19, 1668
SaqAI	TTAA	3 cut(s)	1257, 1338, 2008
Sau3AI	GATC	5 cut(s)	465, 787, 1079, 1193, 1723
Sau96I	GGNCC	3 cut(s)	566, 567, 590
SchI	GAGTC	6 cut(s)	64, 88, 376, 490, 942, 1690
ScrFI	CCNGG	6 cut(s)	564, 627, 813, 1007, 1746, 1847
SduI	GDGCHC	3 cut(s)	106, 570, 1781
SfaNI	GCATC	5 cut(s)	233, 639, 1054, 1474, 1496
SfcI	CTRYAG	2 cut(s)	1638, 1762
SfoI	GGCGCC	1 cut(s)	15
SinI	GGWCC	1 cut(s)	590
SmiMI	CAYNNNNRTG	2 cut(s)	1137, 1358
SmlI	CTYRAG	1 cut(s)	1912
SmoI	CTYRAG	1 cut(s)	1912
SnaBI	TACGTA	1 cut(s)	922
Sse9I	AATT	4 cut(s)	772, 1001, 1020, 1182
SseBI	AGGCCT	1 cut(s)	1531
SspDI	GGCGCC	1 cut(s)	13
SspMI	CTAG	3 cut(s)	860, 1382, 1860
SstI	GAGCTC	1 cut(s)	1781
StuI	AGGCCT	1 cut(s)	1531
StyD4I	CCNGG	6 cut(s)	562, 625, 811, 1005, 1744, 1845
StyI	CCWWGG	2 cut(s)	822, 1158
TaaI	ACNGT	7 cut(s)	165, 587, 1229, 1598, 1856, 1895, 1988
TaiI	ACGT	4 cut(s)	924, 1000, 1654, 1713
TaqI	TCGA	7 cut(s)	20, 92, 170, 197, 1543, 1669, 1675
TasI	AATT	4 cut(s)	772, 1001, 1020, 1182
TatI	WGTACW	1 cut(s)	1033
TauI	GCSGC	8 cut(s)	61, 235, 238, 328, 556, 559, 598, 1938
TfiI	GAWTC	2 cut(s)	887, 1737
Tru1I	TTAA	3 cut(s)	1257, 1338, 2008
Tru9I	TTAA	3 cut(s)	1257, 1338, 2008
TscAI	CASTG	2 cut(s)	760, 1062
TseFI	GTSAC	1 cut(s)	150
TseI	GCWGC	9 cut(s)	680, 725, 750, 967, 1262, 1637, 1640, 1917, 1995
Tsp45I	GTSAC	1 cut(s)	150
TspDTI	ATGAA	6 cut(s)	546, 1208, 1235, 1236, 1584, 1829
TspGWI	ACGGA	1 cut(s)	135
TspRI	CASTG	2 cut(s)	760, 1062
Van91I	CCANNNNNTGG	2 cut(s)	587, 1164
VneI	GTGCAC	1 cut(s)	102
VpaK11BI	GGWCC	1 cut(s)	590
XagI	CCTNNNNNAGG	1 cut(s)	810
XapI	RAATTY	1 cut(s)	1001
XcmI	CCANNNNNNNNNTGG	4 cut(s)	457, 1120, 1360, 1951
XmiI	GTMKAC	3 cut(s)	20, 1518, 1669
XmnI	GAANNNNTTC	1 cut(s)	1820
XspI	CTAG	3 cut(s)	860, 1382, 1860
Zsp2I	ATGCAT	1 cut(s)	1489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.