RchiOBHm_Chr2g0138511

proline-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
56221731 .. 56227780
6050 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ50918

Sequence Viewer

Length: 1206 bp
ATGAGTACTCAGGGCAACAACCCAAAGGCCTGGCAACGTGCGGGTATAGTGCGAGTACCGTGCGGGTTCTTAACAGATCGACCCGGTTCCGCCACTGTTTCTGAGGATGAATTGTATGGATCAGATAAACCGCCCCCAGCCTTTGGATTTTCCGAAAGCACATTTACATACGAAGAATTAGTCAGGGCAACAAATGGATTCTCCAACGACAATCTTCTTGGTCAAGGAGGCTTTGGTTTTGTCCATAAAGGTGTTCTTCCAAATGGGAAAGTGGTTGCAATTAAACAGCTGAAAGCTGGGAGTGGACAGGGGGACCGTGAATTCCAGGCAGAGGTTGAAGTCATTAATCGTGTCCATCACAGACATCTTGTATCACTGGTTGGATACTGCATTAGTGGGGCCCAGAGATTGCTTGTTTATGAGTTCATTTCCAACAACACCTTGGAATTTCACTTGCATCGAAAGGGGCGACCAACTATGACTTGGCCGACAAGAATGAGAATTGCTCTAGGATCTGCAAAAGGATTGGCATATCTCCATGAGGACTGTCATCCCAAGATCATACACCGTGACATCAAGGCTGCCAATATTCTTATTGATGACGACTTTGAGGCAAAGGTTGCAGACTTTGGACTCGCCAAGTTTGCCTTAGATACAGATACTCATGTCTCCACAAGGGTTATGGGAACTTTTGGATACTTAGATCCTGAATATGCAGCCAGTGGAAAGCTCAGTGATAAGTCAGATGTCTTCTCATTCGGAGTTGTGCTATTGGAATTGATTACTGGACGCCAACCCATTGATAAAACTCATTCCTTCACAACTCATTCCTTCACTGATGATAGCTTGGTTGAGTGGGCAAGGCCTTTGCTCGCGCGAGCATTGGAAAAGGGAAACATTGATGGTCTTGTTGATGAAAGGTTGCAGAATGTTTACAACTCCAGCGAAATGACTCGTATGATTGCCTGCGCTGCTGCTTCTGTGCGACATTCTGCCCACCGTCGGCCAAAAATGAGCCAGGTAGTTCGAGCTTTGGAAGGCAATCTTTCTCCAGATGAATTAAATGAAGGAGTTATACCAGGTCAAAGTATGATATACATTTCCTCTGAAAGCACACAATACAGCACTCGTAAATACAAGGAAGACATGTTGAAATTTAGAAAGTTGGCACTAGAAAGCCAAGGGCTAGATCAAGGAATTAGCTAG

Protein Analysis

401

Amino Acids

44.38

Weight (kDa)

6.71

Isoelectric Point (pI)

25.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 68 - 277 1.7e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 70 - 278 4.4e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 143
AccII CGCG 2 cut(s) 875, 877
AciI CCGC 4 cut(s) 41, 63, 90, 131
AclWI GGATC 3 cut(s) 127, 520, 698
AcoI YGGCCR 2 cut(s) 485, 1004
AcsI RAATTY 3 cut(s) 320, 446, 1154
AcyI GRCGYC 1 cut(s) 790
AfaI GTAC 2 cut(s) 7, 57
AfiI CCNNNNNNNGG 3 cut(s) 143, 331, 1002
AflIII ACRYGT 1 cut(s) 1146
AgsI TTSAA 2 cut(s) 338, 1153
AjnI CCWGG 4 cut(s) 29, 324, 1017, 1078
AluBI AGCT 6 cut(s) 289, 296, 730, 846, 1031, 1203
AluI AGCT 6 cut(s) 289, 296, 730, 846, 1031, 1203
Alw26I GTCTC 1 cut(s) 673
AlwI GGATC 3 cut(s) 127, 520, 698
AoxI GGCC 5 cut(s) 27, 399, 485, 863, 1004
ApaI GGGCCC 1 cut(s) 403
ApeKI GCWGC 4 cut(s) 581, 716, 971, 974
ApoI RAATTY 3 cut(s) 320, 446, 1154
ArsI GACNNNNNNTTYG 2 cut(s) 165, 197
AseI ATTAAT 1 cut(s) 345
AspLEI GCGC 2 cut(s) 877, 971
AspS9I GGNCC 3 cut(s) 313, 399, 400
AsuC2I CCSGG 1 cut(s) 84
AvaII GGWCC 1 cut(s) 313
BaeGI GKGCMC 1 cut(s) 403
BaeI ACNNNNGTAYC 2 cut(s) 651, 684
BanII GRGCYC 1 cut(s) 403
BarI GAAGNNNNNNTAC 2 cut(s) 1059, 1091
BbsI GAAGAC 2 cut(s) 742, 1149
BbvI GCAGC 4 cut(s) 568, 728, 958, 961
BccI CCATC 2 cut(s) 363, 896
BcgI CGANNNNNNTGC 2 cut(s) 42, 76
BciT130I CCWGG 4 cut(s) 31, 326, 1019, 1080
BciVI GTATCC 2 cut(s) 377, 689
BcnI CCSGG 1 cut(s) 84
BcoDI GTCTC 1 cut(s) 673
BfaI CTAG 4 cut(s) 509, 1172, 1187, 1204
BfuI GTATCC 2 cut(s) 377, 689
BisI GCNGC 4 cut(s) 582, 717, 972, 975
BlsI GCNGC 4 cut(s) 583, 718, 973, 976
BmcAI AGTACT 1 cut(s) 7
Bme1390I CCNGG 5 cut(s) 31, 84, 326, 1019, 1080
Bme18I GGWCC 1 cut(s) 313
BmgT120I GGNCC 3 cut(s) 313, 399, 400
BmiI GGNNCC 4 cut(s) 88, 314, 400, 401
BmrFI CCNGG 5 cut(s) 31, 84, 326, 1019, 1080
BmsI GCATC 1 cut(s) 466
BpiI GAAGAC 2 cut(s) 742, 1149
BplI GAGNNNNNCTC 2 cut(s) 490, 522
BpmI CTGGAG 2 cut(s) 925, 1035
BpuMI CCSGG 1 cut(s) 84
BsaHI GRCGYC 1 cut(s) 790
BsaJI CCNNGG 2 cut(s) 441, 1180
Bsc4I CCNNNNNNNGG 3 cut(s) 143, 331, 1002
Bse1I ACTGG 3 cut(s) 381, 720, 790
BseBI CCWGG 4 cut(s) 31, 326, 1019, 1080
BseDI CCNNGG 2 cut(s) 441, 1180
BseGI GGATG 2 cut(s) 112, 550
BseLI CCNNNNNNNGG 3 cut(s) 143, 331, 1002
BseMII CTCAG 3 cut(s) 23, 93, 745
BseNI ACTGG 3 cut(s) 381, 720, 790
BseSI GKGCMC 1 cut(s) 403
BseXI GCAGC 4 cut(s) 568, 728, 958, 961
BseYI CCCAGC 2 cut(s) 136, 296
Bsh1236I CGCG 2 cut(s) 875, 877
BshFI GGCC 5 cut(s) 29, 401, 487, 865, 1006
BsiSI CCGG 1 cut(s) 84
BslFI GGGAC 1 cut(s) 326
BslI CCNNNNNNNGG 3 cut(s) 143, 331, 1002
BsmAI GTCTC 1 cut(s) 673
BsmFI GGGAC 1 cut(s) 326
BsnI GGCC 5 cut(s) 29, 401, 487, 865, 1006
Bsp120I GGGCCC 1 cut(s) 399
Bsp1286I GDGCHC 1 cut(s) 403
Bsp143I GATC 6 cut(s) 76, 119, 512, 558, 703, 1189
BspACI CCGC 4 cut(s) 41, 63, 90, 131
BspANI GGCC 5 cut(s) 29, 401, 487, 865, 1006
BspCNI CTCAG 3 cut(s) 22, 94, 744
BspFNI CGCG 2 cut(s) 875, 877
BspLI GGNNCC 4 cut(s) 88, 314, 400, 401
BspPI GGATC 3 cut(s) 127, 520, 698
BsrI ACTGG 3 cut(s) 381, 720, 790
BssECI CCNNGG 2 cut(s) 441, 1180
BssMI GATC 6 cut(s) 76, 119, 512, 558, 703, 1189
BssNI GRCGYC 1 cut(s) 790
BssT1I CCWWGG 2 cut(s) 441, 1180
Bst2UI CCWGG 4 cut(s) 31, 326, 1019, 1080
Bst4CI ACNGT 6 cut(s) 60, 97, 317, 548, 569, 1001
BstACI GRCGYC 1 cut(s) 790
BstAPI GCANNNNNTGC 1 cut(s) 620
BstC8I GCNNGC 3 cut(s) 873, 879, 967
BstDEI CTNAG 5 cut(s) 9, 102, 649, 700, 731
BstF5I GGATG 2 cut(s) 112, 550
BstFNI CGCG 2 cut(s) 875, 877
BstHHI GCGC 2 cut(s) 877, 971
BstKTI GATC 6 cut(s) 79, 122, 515, 561, 706, 1192
BstMAI GTCTC 1 cut(s) 673
BstMBI GATC 6 cut(s) 76, 119, 512, 558, 703, 1189
BstMWI GCNNNNNNNGC 3 cut(s) 620, 644, 971
BstNI CCWGG 4 cut(s) 31, 326, 1019, 1080
BstNSI RCATGY 1 cut(s) 1150
BstSCI CCNGG 5 cut(s) 29, 82, 324, 1017, 1078
BstSLI GKGCMC 1 cut(s) 403
BstUI CGCG 2 cut(s) 875, 877
BstV1I GCAGC 4 cut(s) 568, 728, 958, 961
BstV2I GAAGAC 2 cut(s) 742, 1149
BstX2I RGATCY 2 cut(s) 512, 703
BstXI CCANNNNNNTGG 1 cut(s) 30
BstYI RGATCY 2 cut(s) 512, 703
BsuI GTATCC 2 cut(s) 377, 689
BsuRI GGCC 5 cut(s) 29, 401, 487, 865, 1006
BtsCI GGATG 2 cut(s) 112, 550
BtsIMutI CAGTG 5 cut(s) 93, 374, 727, 739, 834
Cac8I GCNNGC 3 cut(s) 873, 879, 967
CfoI GCGC 2 cut(s) 877, 971
Cfr13I GGNCC 3 cut(s) 313, 399, 400
CseI GACGC 1 cut(s) 798
CsiI ACCWGGT 1 cut(s) 1078
Csp6I GTAC 2 cut(s) 6, 56
CviAII CATG 3 cut(s) 539, 665, 1147
CviQI GTAC 2 cut(s) 6, 56
DdeI CTNAG 5 cut(s) 9, 102, 649, 700, 731
DpnI GATC 6 cut(s) 78, 121, 514, 560, 705, 1191
DpnII GATC 6 cut(s) 76, 119, 512, 558, 703, 1189
EaeI YGGCCR 2 cut(s) 485, 1004
EciI GGCGGA 1 cut(s) 79
Eco130I CCWWGG 2 cut(s) 441, 1180
Eco147I AGGCCT 2 cut(s) 29, 865
Eco24I GRGCYC 1 cut(s) 403
Eco47I GGWCC 1 cut(s) 313
EcoO109I RGGNCCY 1 cut(s) 399
EcoRI GAATTC 1 cut(s) 320
EcoRII CCWGG 4 cut(s) 29, 324, 1017, 1078
EcoT14I CCWWGG 2 cut(s) 441, 1180
EcoT38I GRGCYC 1 cut(s) 403
ErhI CCWWGG 2 cut(s) 441, 1180
FaeI CATG 3 cut(s) 542, 668, 1150
FalI AAGNNNNNCTT 6 cut(s) 240, 272, 632, 664, 1029, 1061
FaqI GGGAC 1 cut(s) 326
FatI CATG 3 cut(s) 538, 664, 1146
FauI CCCGC 2 cut(s) 34, 56
Fnu4HI GCNGC 4 cut(s) 582, 717, 972, 975
FokI GGATG 2 cut(s) 119, 537
FriOI GRGCYC 1 cut(s) 403
Fsp4HI GCNGC 4 cut(s) 582, 717, 972, 975
FspBI CTAG 4 cut(s) 509, 1172, 1187, 1204
GlaI GCGC 2 cut(s) 876, 970
GluI GCNGC 4 cut(s) 582, 717, 972, 975
GsaI CCCAGC 2 cut(s) 140, 300
GsuI CTGGAG 2 cut(s) 925, 1035
HaeIII GGCC 5 cut(s) 29, 401, 487, 865, 1006
HapII CCGG 1 cut(s) 84
HgaI GACGC 1 cut(s) 798
HhaI GCGC 2 cut(s) 877, 971
Hin1I GRCGYC 1 cut(s) 790
Hin1II CATG 3 cut(s) 542, 668, 1150
Hin6I GCGC 2 cut(s) 875, 969
HinP1I GCGC 2 cut(s) 875, 969
HinfI GANTC 3 cut(s) 198, 633, 952
HpaII CCGG 1 cut(s) 84
Hpy166II GTNNAC 2 cut(s) 305, 934
Hpy188I TCNGA 6 cut(s) 103, 124, 154, 745, 761, 1108
Hpy188III TCNNGA 2 cut(s) 707, 1052
Hpy8I GTNNAC 2 cut(s) 305, 934
Hpy99I CGWCG 1 cut(s) 1005
HpyAV CCTTC 4 cut(s) 826, 841, 1031, 1061
HpyCH4III ACNGT 6 cut(s) 60, 97, 317, 548, 569, 1001
HpyCH4IV ACGT 1 cut(s) 37
HpyCH4V TGCA 7 cut(s) 278, 390, 457, 518, 623, 716, 925
HpyF10VI GCNNNNNNNGC 3 cut(s) 620, 644, 971
HpyF3I CTNAG 5 cut(s) 9, 102, 649, 700, 731
HpySE526I ACGT 1 cut(s) 37
Hsp92I GRCGYC 1 cut(s) 790
Hsp92II CATG 3 cut(s) 542, 668, 1150
HspAI GCGC 2 cut(s) 875, 969
Kzo9I GATC 6 cut(s) 76, 119, 512, 558, 703, 1189
Lsp1109I GCAGC 4 cut(s) 568, 728, 958, 961
LweI GCATC 1 cut(s) 466
MabI ACCWGGT 1 cut(s) 1078
MaeI CTAG 4 cut(s) 509, 1172, 1187, 1204
MaeII ACGT 1 cut(s) 37
MaeIII GTNAC 1 cut(s) 569
MalI GATC 6 cut(s) 78, 121, 514, 560, 705, 1191
MboI GATC 6 cut(s) 76, 119, 512, 558, 703, 1189
MboII GAAGA 5 cut(s) 185, 206, 248, 742, 1154
MflI RGATCY 2 cut(s) 512, 703
MhlI GDGCHC 1 cut(s) 403
MlyI GAGTC 2 cut(s) 627, 946
MmeI TCCRAC 3 cut(s) 228, 361, 456
MnlI CCTC 6 cut(s) 97, 221, 325, 535, 604, 1114
MseI TTAA 4 cut(s) 71, 282, 345, 1061
MslI CAYNNNNRTG 1 cut(s) 249
MspA1I CMGCKG 1 cut(s) 289
MspI CCGG 1 cut(s) 84
MspR9I CCNGG 5 cut(s) 31, 84, 326, 1019, 1080
MvaI CCWGG 4 cut(s) 31, 326, 1019, 1080
MvnI CGCG 2 cut(s) 875, 877
MwoI GCNNNNNNNGC 3 cut(s) 620, 644, 971
NciI CCSGG 1 cut(s) 84
NdeII GATC 6 cut(s) 76, 119, 512, 558, 703, 1189
NlaIII CATG 3 cut(s) 542, 668, 1150
NlaIV GGNNCC 4 cut(s) 88, 314, 400, 401
NmuCI GTSAC 1 cut(s) 569
NspI RCATGY 1 cut(s) 1150
PceI AGGCCT 2 cut(s) 29, 865
PciI ACATGT 1 cut(s) 1146
PcsI WCGNNNNNNNCGW 1 cut(s) 466
PfeI GAWTC 1 cut(s) 198
PflMI CCANNNNNTGG 1 cut(s) 143
PkrI GCNGC 4 cut(s) 583, 718, 973, 976
PleI GAGTC 2 cut(s) 627, 946
PpsI GAGTC 2 cut(s) 627, 946
PscI ACATGT 1 cut(s) 1146
PshBI ATTAAT 1 cut(s) 345
Psp6I CCWGG 4 cut(s) 29, 324, 1017, 1078
PspFI CCCAGC 2 cut(s) 136, 296
PspGI CCWGG 4 cut(s) 29, 324, 1017, 1078
PspN4I GGNNCC 4 cut(s) 88, 314, 400, 401
PspOMI GGGCCC 1 cut(s) 399
PspPI GGNCC 3 cut(s) 313, 399, 400
PsuI RGATCY 2 cut(s) 512, 703
PvuII CAGCTG 1 cut(s) 289
RsaI GTAC 2 cut(s) 7, 57
RsaNI GTAC 2 cut(s) 6, 56
RseI CAYNNNNRTG 1 cut(s) 249
SaqAI TTAA 4 cut(s) 71, 282, 345, 1061
SatI GCNGC 4 cut(s) 582, 717, 972, 975
Sau3AI GATC 6 cut(s) 76, 119, 512, 558, 703, 1189
Sau96I GGNCC 3 cut(s) 313, 399, 400
ScaI AGTACT 1 cut(s) 7
SchI GAGTC 2 cut(s) 627, 946
ScrFI CCNGG 5 cut(s) 31, 84, 326, 1019, 1080
SduI GDGCHC 1 cut(s) 403
SexAI ACCWGGT 1 cut(s) 1078
SfaNI GCATC 1 cut(s) 466
SinI GGWCC 1 cut(s) 313
SmiMI CAYNNNNRTG 1 cut(s) 249
SseBI AGGCCT 2 cut(s) 29, 865
SsiI CCGC 4 cut(s) 41, 63, 90, 131
SspI AATATT 1 cut(s) 589
SspMI CTAG 4 cut(s) 509, 1172, 1187, 1204
StuI AGGCCT 2 cut(s) 29, 865
StyD4I CCNGG 5 cut(s) 29, 82, 324, 1017, 1078
StyI CCWWGG 2 cut(s) 441, 1180
TaaI ACNGT 6 cut(s) 60, 97, 317, 548, 569, 1001
TaiI ACGT 1 cut(s) 40
TaqI TCGA 3 cut(s) 79, 460, 1027
TatI WGTACW 1 cut(s) 5
TfiI GAWTC 1 cut(s) 198
Tru1I TTAA 4 cut(s) 71, 282, 345, 1061
Tru9I TTAA 4 cut(s) 71, 282, 345, 1061
TscAI CASTG 5 cut(s) 100, 381, 727, 739, 841
TseFI GTSAC 1 cut(s) 569
TseI GCWGC 4 cut(s) 581, 716, 971, 974
Tsp45I GTSAC 1 cut(s) 569
TspDTI ATGAA 5 cut(s) 123, 415, 930, 1071, 1080
TspRI CASTG 5 cut(s) 100, 381, 727, 739, 841
Van91I CCANNNNNTGG 1 cut(s) 143
VpaK11BI GGWCC 1 cut(s) 313
VspI ATTAAT 1 cut(s) 345
XapI RAATTY 3 cut(s) 320, 446, 1154
XceI RCATGY 1 cut(s) 1150
XcmI CCANNNNNNNNNTGG 3 cut(s) 439, 480, 679
XspI CTAG 4 cut(s) 509, 1172, 1187, 1204
ZrmI AGTACT 1 cut(s) 7
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.