Rmu_sc0012206.1_g000004

proline-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012206.1
Physical Location & Seq
Forward (+)
18875 .. 23510
4636 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012206.1_g000004.1.cds

Sequence Viewer

Length: 1479 bp
atgactgattattatccccccgctctcgctcccgctcctacaagcactcctccgatgatcagcactaccacgtctcctcctcctacaatgactggttatgaccccactttcactcctacaatgactggttatgtcctggatcccgctcctacaagcacgccggtcggggttatagtaggagtggcgataggagggttcagtgtacttgttgtaatggtcattatcttctttatctatcggagacggaagaacaggttagcgagagctaatgagtcagggcaacaacccaaagataaaccacctccagcctttggattttccgaaagcacatttacatatgaagaattagtcatggcaacaaatggattctccaacgacaatcttcttggtcaaggaggctttggttttgtccataaaggtattcttccagatgggaaagtggttgcaattaaacagctgaaagctgggagtggacagggggagcgtgaattccaggcagaggttgaagtcattagtcgtgtccatcacagacatcttgtatcactggttggatactgcattagtggggcccatagattgcttgcttatgagttcatttccaacaacaccttggaatttcacttgcatggaaagaggcgaccaactatgacttggccaacaagaatgaaaattgctctaggatctgcaaaaggattggcatatctccatgaggactgtcatcccaagatcatacaccgtgacatcaaggctgccaatattcttattgatgacaactttgaggcaaaggttgcagactttggacttgccaagttggccttagatacagatactcatgtctccacaagggttatgggaacttttggatacctagctcctgaatatgcatccagtggaaagctcagtgataagtcagatgtcttctcattcggagtcatgctattggaattgattactggacgccaacccattgataaaactcgttccttcactgatgatagcatggttgagtgggcaaggcctttgctcgcgcgagcattggaaaagggaaactttgatggtcttgttgatgaaaggttgcagaatgattacaactccagcgaaatggctcgtatgattgcctgcgctgctgcttctgtgcatcattctgcccgccgtcggccaaaaatgagccaggtagttcgagctttggaaggcaatctttctccagatgaattaaatggagttataccaggtcaaagtatgatatacagttcctctgaaagcacacaatacagtactcgtgaatacaaggaagacatgttgaaatttagaaagttagcactagaaagccaagagctagatcaaggaattagtgagaccagtgggcccagcagtgattttggccagcaccaatctacctctagtggtgaaagccaacaaaccagtcaagataccgaacacgggcgaatgtacaaagacagacagccaagactatggtaa

Protein Analysis

492

Amino Acids

54.31

Weight (kDa)

6.58

Isoelectric Point (pI)

40.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 311
AccBSI CCGCTC 3 cut(s) 23, 35, 146
AccII CGCG 2 cut(s) 1028, 1030
AciI CCGC 4 cut(s) 21, 33, 144, 1150
AclWI GGATC 3 cut(s) 134, 147, 688
AcoI YGGCCR 3 cut(s) 653, 1157, 1381
AcsI RAATTY 3 cut(s) 488, 614, 1304
AcyI GRCGYC 1 cut(s) 958
AfaI GTAC 3 cut(s) 204, 1276, 1451
AfiI CCNNNNNNNGG 4 cut(s) 311, 499, 1155, 1440
AflIII ACRYGT 1 cut(s) 1296
AgsI TTSAA 2 cut(s) 506, 1303
AjiI CACGTC 1 cut(s) 72
AjnI CCWGG 4 cut(s) 135, 492, 1170, 1228
AluBI AGCT 7 cut(s) 266, 457, 464, 872, 898, 1184, 1336
AluI AGCT 7 cut(s) 266, 457, 464, 872, 898, 1184, 1336
Alw26I GTCTC 4 cut(s) 78, 235, 841, 1349
AlwI GGATC 3 cut(s) 134, 147, 688
AoxI GGCC 7 cut(s) 567, 653, 813, 1016, 1157, 1364, 1381
ApaI GGGCCC 2 cut(s) 571, 1368
ApeKI GCWGC 3 cut(s) 749, 1124, 1127
ApoI RAATTY 3 cut(s) 488, 614, 1304
AspLEI GCGC 2 cut(s) 1030, 1124
AspS9I GGNCC 4 cut(s) 567, 568, 1364, 1365
AsuHPI GGTGA 1 cut(s) 1418
BaeGI GKGCMC 2 cut(s) 571, 1368
BaeI ACNNNNGTAYC 2 cut(s) 819, 852
BalI TGGCCA 2 cut(s) 655, 1383
BamHI GGATCC 1 cut(s) 139
BanII GRGCYC 2 cut(s) 571, 1368
BauI CACGAG 1 cut(s) 1278
BbsI GAAGAC 2 cut(s) 910, 1299
BbvI GCAGC 3 cut(s) 736, 1111, 1114
BccI CCATC 3 cut(s) 425, 531, 1049
BceAI ACGGC 1 cut(s) 1137
BcgI CGANNNNNNTGC 2 cut(s) 145, 179
BciT130I CCWGG 4 cut(s) 137, 494, 1172, 1230
BciVI GTATCC 2 cut(s) 545, 857
BclI TGATCA 1 cut(s) 57
BcoDI GTCTC 4 cut(s) 78, 235, 841, 1349
BfaI CTAG 5 cut(s) 677, 869, 1322, 1337, 1401
BfuI GTATCC 2 cut(s) 545, 857
BglI GCCNNNNNGGC 1 cut(s) 812
BisI GCNGC 3 cut(s) 750, 1125, 1128
BlsI GCNGC 3 cut(s) 751, 1126, 1129
BmcAI AGTACT 1 cut(s) 1276
Bme1390I CCNGG 4 cut(s) 137, 494, 1172, 1230
BmgBI CACGTC 1 cut(s) 72
BmgT120I GGNCC 4 cut(s) 567, 568, 1364, 1365
BmiI GGNNCC 4 cut(s) 141, 568, 569, 1366
BmrFI CCNGG 4 cut(s) 137, 494, 1172, 1230
BmsI GCATC 2 cut(s) 893, 1147
BpiI GAAGAC 2 cut(s) 910, 1299
BpmI CTGGAG 3 cut(s) 288, 1078, 1188
BsaBI GATNNNNATC 1 cut(s) 12
BsaHI GRCGYC 1 cut(s) 958
BsaI GGTCTC 1 cut(s) 1349
BsaJI CCNNGG 1 cut(s) 609
BsaXI ACNNNNNCTCC 8 cut(s) 31, 58, 61, 61, 88, 91, 97, 127
Bsc4I CCNNNNNNNGG 4 cut(s) 311, 499, 1155, 1440
Bse118I RCCGGY 1 cut(s) 160
Bse1I ACTGG 7 cut(s) 97, 130, 549, 888, 958, 1359, 1422
Bse8I GATNNNNATC 1 cut(s) 12
BseBI CCWGG 4 cut(s) 137, 494, 1172, 1230
BseDI CCNNGG 1 cut(s) 609
BseGI GGATG 2 cut(s) 718, 884
BseJI GATNNNNATC 1 cut(s) 12
BseLI CCNNNNNNNGG 4 cut(s) 311, 499, 1155, 1440
BseMII CTCAG 1 cut(s) 913
BseNI ACTGG 7 cut(s) 97, 130, 549, 888, 958, 1359, 1422
BseRI GAGGAG 3 cut(s) 39, 66, 69
BseSI GKGCMC 2 cut(s) 571, 1368
BseXI GCAGC 3 cut(s) 736, 1111, 1114
BseYI CCCAGC 2 cut(s) 464, 1367
Bsh1236I CGCG 2 cut(s) 1028, 1030
Bsh1285I CGRYCG 1 cut(s) 165
BshFI GGCC 7 cut(s) 569, 655, 815, 1018, 1159, 1366, 1383
BsiEI CGRYCG 1 cut(s) 165
BsiSI CCGG 1 cut(s) 161
BslI CCNNNNNNNGG 4 cut(s) 311, 499, 1155, 1440
BsmAI GTCTC 4 cut(s) 78, 235, 841, 1349
BsmBI CGTCTC 2 cut(s) 78, 235
BsnI GGCC 7 cut(s) 569, 655, 815, 1018, 1159, 1366, 1383
Bso31I GGTCTC 1 cut(s) 1349
Bsp120I GGGCCC 2 cut(s) 567, 1364
Bsp1286I GDGCHC 2 cut(s) 571, 1368
Bsp1407I TGTACA 1 cut(s) 1449
Bsp143I GATC 5 cut(s) 57, 139, 680, 726, 1339
BspACI CCGC 4 cut(s) 21, 33, 144, 1150
BspANI GGCC 7 cut(s) 569, 655, 815, 1018, 1159, 1366, 1383
BspCNI CTCAG 1 cut(s) 912
BspFNI CGCG 2 cut(s) 1028, 1030
BspLI GGNNCC 4 cut(s) 141, 568, 569, 1366
BspPI GGATC 3 cut(s) 134, 147, 688
BspTNI GGTCTC 1 cut(s) 1349
BsrBI CCGCTC 3 cut(s) 23, 35, 146
BsrFI RCCGGY 1 cut(s) 160
BsrGI TGTACA 1 cut(s) 1449
BsrI ACTGG 7 cut(s) 97, 130, 549, 888, 958, 1359, 1422
BssAI RCCGGY 1 cut(s) 160
BssECI CCNNGG 1 cut(s) 609
BssMI GATC 5 cut(s) 57, 139, 680, 726, 1339
BssNI GRCGYC 1 cut(s) 958
BssSI CACGAG 1 cut(s) 1278
BssT1I CCWWGG 1 cut(s) 609
Bst2BI CACGAG 1 cut(s) 1278
Bst2UI CCWGG 4 cut(s) 137, 494, 1172, 1230
Bst4CI ACNGT 4 cut(s) 716, 737, 1250, 1274
BstACI GRCGYC 1 cut(s) 958
BstAPI GCANNNNNTGC 1 cut(s) 788
BstAUI TGTACA 1 cut(s) 1449
BstC8I GCNNGC 7 cut(s) 158, 582, 1026, 1032, 1120, 1150, 1385
BstDEI CTNAG 2 cut(s) 817, 899
BstF5I GGATG 2 cut(s) 718, 884
BstFNI CGCG 2 cut(s) 1028, 1030
BstHHI GCGC 2 cut(s) 1030, 1124
BstKTI GATC 5 cut(s) 60, 142, 683, 729, 1342
BstMAI GTCTC 4 cut(s) 78, 235, 841, 1349
BstMBI GATC 5 cut(s) 57, 139, 680, 726, 1339
BstMCI CGRYCG 1 cut(s) 165
BstMWI GCNNNNNNNGC 3 cut(s) 788, 812, 1124
BstNI CCWGG 4 cut(s) 137, 494, 1172, 1230
BstNSI RCATGY 1 cut(s) 1300
BstSCI CCNGG 4 cut(s) 135, 492, 1170, 1228
BstSLI GKGCMC 2 cut(s) 571, 1368
BstUI CGCG 2 cut(s) 1028, 1030
BstV1I GCAGC 3 cut(s) 736, 1111, 1114
BstV2I GAAGAC 2 cut(s) 910, 1299
BstX2I RGATCY 2 cut(s) 139, 680
BstXI CCANNNNNNTGG 2 cut(s) 1102, 1473
BstYI RGATCY 2 cut(s) 139, 680
BsuI GTATCC 2 cut(s) 545, 857
BsuRI GGCC 7 cut(s) 569, 655, 815, 1018, 1159, 1366, 1383
BtrI CACGTC 1 cut(s) 72
BtsCI GGATG 2 cut(s) 718, 884
BtsI GCAGTG 1 cut(s) 1378
BtsIMutI CAGTG 7 cut(s) 205, 542, 895, 907, 987, 1366, 1378
Cac8I GCNNGC 7 cut(s) 158, 582, 1026, 1032, 1120, 1150, 1385
CfoI GCGC 2 cut(s) 1030, 1124
Cfr10I RCCGGY 1 cut(s) 160
Cfr13I GGNCC 4 cut(s) 567, 568, 1364, 1365
CseI GACGC 1 cut(s) 966
CsiI ACCWGGT 1 cut(s) 1228
Csp6I GTAC 3 cut(s) 203, 1275, 1450
CviAII CATG 7 cut(s) 352, 626, 707, 833, 934, 1000, 1297
CviQI GTAC 3 cut(s) 203, 1275, 1450
DdeI CTNAG 2 cut(s) 817, 899
DpnI GATC 5 cut(s) 59, 141, 682, 728, 1341
DpnII GATC 5 cut(s) 57, 139, 680, 726, 1339
EaeI YGGCCR 3 cut(s) 653, 1157, 1381
Eco130I CCWWGG 1 cut(s) 609
Eco147I AGGCCT 1 cut(s) 1018
Eco24I GRGCYC 2 cut(s) 571, 1368
Eco31I GGTCTC 1 cut(s) 1349
EcoO109I RGGNCCY 1 cut(s) 567
EcoRI GAATTC 1 cut(s) 488
EcoRII CCWGG 4 cut(s) 135, 492, 1170, 1228
EcoT14I CCWWGG 1 cut(s) 609
EcoT22I ATGCAT 1 cut(s) 886
EcoT38I GRGCYC 2 cut(s) 571, 1368
ErhI CCWWGG 1 cut(s) 609
Esp3I CGTCTC 2 cut(s) 78, 235
FaeI CATG 7 cut(s) 355, 629, 710, 836, 937, 1003, 1300
FalI AAGNNNNNCTT 8 cut(s) 408, 440, 800, 832, 1034, 1066, 1182, 1214
FatI CATG 7 cut(s) 351, 625, 706, 832, 933, 999, 1296
FauI CCCGC 4 cut(s) 28, 40, 151, 1157
FauNDI CATATG 1 cut(s) 337
FbaI TGATCA 1 cut(s) 57
Fnu4HI GCNGC 3 cut(s) 750, 1125, 1128
FokI GGATG 2 cut(s) 705, 871
FriOI GRGCYC 2 cut(s) 571, 1368
Fsp4HI GCNGC 3 cut(s) 750, 1125, 1128
FspBI CTAG 5 cut(s) 677, 869, 1322, 1337, 1401
GlaI GCGC 2 cut(s) 1029, 1123
GluI GCNGC 3 cut(s) 750, 1125, 1128
GsaI CCCAGC 2 cut(s) 468, 1371
GsuI CTGGAG 3 cut(s) 288, 1078, 1188
HaeIII GGCC 7 cut(s) 569, 655, 815, 1018, 1159, 1366, 1383
HapII CCGG 1 cut(s) 161
HgaI GACGC 1 cut(s) 966
HhaI GCGC 2 cut(s) 1030, 1124
Hin1I GRCGYC 1 cut(s) 958
Hin1II CATG 7 cut(s) 355, 629, 710, 836, 937, 1003, 1300
Hin6I GCGC 2 cut(s) 1028, 1122
HinP1I GCGC 2 cut(s) 1028, 1122
HinfI GANTC 3 cut(s) 272, 366, 930
HpaII CCGG 1 cut(s) 161
HphI GGTGA 1 cut(s) 1418
Hpy166II GTNNAC 2 cut(s) 203, 473
Hpy188I TCNGA 6 cut(s) 54, 240, 322, 913, 929, 1258
Hpy188III TCNNGA 5 cut(s) 428, 875, 1205, 1280, 1427
Hpy8I GTNNAC 2 cut(s) 203, 473
Hpy99I CGWCG 1 cut(s) 1158
HpyAV CCTTC 2 cut(s) 994, 1184
HpyCH4III ACNGT 4 cut(s) 716, 737, 1250, 1274
HpyCH4IV ACGT 1 cut(s) 71
HpyCH4V TGCA 8 cut(s) 446, 558, 625, 686, 791, 884, 1078, 1138
HpyF10VI GCNNNNNNNGC 3 cut(s) 788, 812, 1124
HpyF3I CTNAG 2 cut(s) 817, 899
HpySE526I ACGT 1 cut(s) 71
Hsp92I GRCGYC 1 cut(s) 958
Hsp92II CATG 7 cut(s) 355, 629, 710, 836, 937, 1003, 1300
HspAI GCGC 2 cut(s) 1028, 1122
Ksp22I TGATCA 1 cut(s) 57
Kzo9I GATC 5 cut(s) 57, 139, 680, 726, 1339
LmnI GCTCC 5 cut(s) 34, 40, 151, 481, 877
Lsp1109I GCAGC 3 cut(s) 736, 1111, 1114
LweI GCATC 2 cut(s) 893, 1147
MabI ACCWGGT 1 cut(s) 1228
MaeI CTAG 5 cut(s) 677, 869, 1322, 1337, 1401
MaeII ACGT 1 cut(s) 71
MaeIII GTNAC 1 cut(s) 737
MalI GATC 5 cut(s) 59, 141, 682, 728, 1341
MbiI CCGCTC 3 cut(s) 23, 35, 146
MboI GATC 5 cut(s) 57, 139, 680, 726, 1339
MboII GAAGA 7 cut(s) 217, 259, 353, 374, 416, 910, 1304
MflI RGATCY 2 cut(s) 139, 680
MhlI GDGCHC 2 cut(s) 571, 1368
MlsI TGGCCA 2 cut(s) 655, 1383
MluCI AATT 9 cut(s) 344, 447, 488, 614, 669, 944, 1211, 1304, 1347
MluNI TGGCCA 2 cut(s) 655, 1383
MlyI GAGTC 2 cut(s) 281, 939
MmeI TCCRAC 3 cut(s) 396, 529, 624
Mox20I TGGCCA 2 cut(s) 655, 1383
Mph1103I ATGCAT 1 cut(s) 886
MscI TGGCCA 2 cut(s) 655, 1383
MseI TTAA 2 cut(s) 450, 1214
MslI CAYNNNNRTG 1 cut(s) 624
Msp20I TGGCCA 2 cut(s) 655, 1383
MspA1I CMGCKG 1 cut(s) 457
MspI CCGG 1 cut(s) 161
MspR9I CCNGG 4 cut(s) 137, 494, 1172, 1230
MvaI CCWGG 4 cut(s) 137, 494, 1172, 1230
MvnI CGCG 2 cut(s) 1028, 1030
MwoI GCNNNNNNNGC 3 cut(s) 788, 812, 1124
NdeI CATATG 1 cut(s) 337
NdeII GATC 5 cut(s) 57, 139, 680, 726, 1339
NlaIII CATG 7 cut(s) 355, 629, 710, 836, 937, 1003, 1300
NlaIV GGNNCC 4 cut(s) 141, 568, 569, 1366
NmuCI GTSAC 1 cut(s) 737
NsiI ATGCAT 1 cut(s) 886
NspI RCATGY 1 cut(s) 1300
PceI AGGCCT 1 cut(s) 1018
PciI ACATGT 1 cut(s) 1296
PfeI GAWTC 1 cut(s) 366
PflMI CCANNNNNTGG 1 cut(s) 311
PfoI TCCNGGA 1 cut(s) 135
PkrI GCNGC 3 cut(s) 751, 1126, 1129
PleI GAGTC 2 cut(s) 280, 938
PpsI GAGTC 2 cut(s) 280, 938
PscI ACATGT 1 cut(s) 1296
Psp6I CCWGG 4 cut(s) 135, 492, 1170, 1228
PspFI CCCAGC 2 cut(s) 464, 1367
PspGI CCWGG 4 cut(s) 135, 492, 1170, 1228
PspN4I GGNNCC 4 cut(s) 141, 568, 569, 1366
PspOMI GGGCCC 2 cut(s) 567, 1364
PspPI GGNCC 4 cut(s) 567, 568, 1364, 1365
PsuI RGATCY 2 cut(s) 139, 680
PvuII CAGCTG 1 cut(s) 457
RsaI GTAC 3 cut(s) 204, 1276, 1451
RsaNI GTAC 3 cut(s) 203, 1275, 1450
RseI CAYNNNNRTG 1 cut(s) 624
SaqAI TTAA 2 cut(s) 450, 1214
SatI GCNGC 3 cut(s) 750, 1125, 1128
Sau3AI GATC 5 cut(s) 57, 139, 680, 726, 1339
Sau96I GGNCC 4 cut(s) 567, 568, 1364, 1365
ScaI AGTACT 1 cut(s) 1276
SchI GAGTC 2 cut(s) 281, 939
ScrFI CCNGG 4 cut(s) 137, 494, 1172, 1230
SduI GDGCHC 2 cut(s) 571, 1368
SexAI ACCWGGT 1 cut(s) 1228
SfaNI GCATC 2 cut(s) 893, 1147
SmiMI CAYNNNNRTG 1 cut(s) 624
Sse9I AATT 9 cut(s) 344, 447, 488, 614, 669, 944, 1211, 1304, 1347
SseBI AGGCCT 1 cut(s) 1018
SsiI CCGC 4 cut(s) 21, 33, 144, 1150
SspI AATATT 1 cut(s) 757
SspMI CTAG 5 cut(s) 677, 869, 1322, 1337, 1401
StuI AGGCCT 1 cut(s) 1018
StyD4I CCNGG 4 cut(s) 135, 492, 1170, 1228
StyI CCWWGG 1 cut(s) 609
TaaI ACNGT 4 cut(s) 716, 737, 1250, 1274
TaiI ACGT 1 cut(s) 74
TaqI TCGA 1 cut(s) 1180
TasI AATT 9 cut(s) 344, 447, 488, 614, 669, 944, 1211, 1304, 1347
TatI WGTACW 3 cut(s) 202, 1274, 1449
TfiI GAWTC 1 cut(s) 366
Tru1I TTAA 2 cut(s) 450, 1214
Tru9I TTAA 2 cut(s) 450, 1214
TscAI CASTG 7 cut(s) 205, 549, 895, 907, 994, 1366, 1378
TseFI GTSAC 1 cut(s) 737
TseI GCWGC 3 cut(s) 749, 1124, 1127
Tsp45I GTSAC 1 cut(s) 737
TspDTI ATGAA 5 cut(s) 354, 583, 680, 1083, 1224
TspGWI ACGGA 1 cut(s) 259
TspRI CASTG 7 cut(s) 205, 549, 895, 907, 994, 1366, 1378
Van91I CCANNNNNTGG 1 cut(s) 311
XapI RAATTY 3 cut(s) 488, 614, 1304
XceI RCATGY 1 cut(s) 1300
XcmI CCANNNNNNNNNTGG 3 cut(s) 607, 648, 847
XspI CTAG 5 cut(s) 677, 869, 1322, 1337, 1401
ZrmI AGTACT 1 cut(s) 1276
Zsp2I ATGCAT 1 cut(s) 886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.