Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0001011

Physical Location & Seq

Genomic Coordinates Forward (+)

59710456 .. 59739599

Gene Structure 29144 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG400200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGAAACCAAAACCGGGTCCCACCAAATGTGTTCATCTCTTCTACACCAACCACCATCACCATGGCATGACTATTCATTTTCTTCAGACCCTGCATCTTCTTCACCAAGTCAAATTCAAAAACTCCACCTCACCTCCTCCCCCTACTCCGACGGACCACGCCACCGCTACTGCTACAATGACTGAGTATGCCACCCCTCCGACTGAGAATGCCACCCCTCCCGCTCCTACAAGGGCTGGTTTTCCCGCTTTCATTCCTACAATGACTGGTTATCCCCCCACTTTCATTCCTAAAAGGACTGGTTATCCCCGCTTGGATCCCGCTCCTATAAGAACGCCGGTCGGGGATATGGTCGGACTTGCGACAGGAGTGTTCAGTGTATTTGTTGTATTGGTCATTATCTCCTTTATCTATCGGAGACGGAAGAACAGGTTAGCGAGAGCTAATGAGTCAGGGCAACAACCCAAAGATAAACCGCCCCCAGCCTTTGGATTTTCCGAAAGCACATTTACATATGAAGAATTAGTCATGGCAACAAATGGATTCTCCAACGACAATCTTCTTGGTCAAGGAGGCTTTGGTTTTGTCCATAAAGGTATTCTTCCAAATGGGAAAGTGGTTGCAATTAAACAGCTGAAAGCTGGGAGTGGACAGGGGGAGCGTGAATTCCAGGCAGAGGTTGAAGTCATTAATCGTGTCCGTCACAGACAACTTGTATCACTGGTTGGATACTGCATTAGTGGGGCCCAGAGATTGCTTGTTTATGAGTTCGTTTCCAACAACACCGTGGAATTTCACTTGCATGGAAAGAGGCGACCAACTATGACTTGGCCAACAAGAATGAAAATTGCTCTAGGATCTGCAAAAGGATTGGCATATCTCCATGAGGACTGTCATCCCAAGATCATACACCGTGACATCAAGGCTGCCAATATCCTTATTGATGCCAACTTTGAGGCAAAGGTTGCAGACTTTGGACTTGCCAAGTTTGCCTTAGATACGGATACTCATGTCTCCACAAGGGTTATGGGAACTTTTGGATACTTAGCTCCTGAATATGCATCCAGTGGAAAGCTCAGTGATAAGTCAGATGTCTTCTCATTCGGAGTCGTGCTATTGGAATTGATTACTGGACGACAACCCATTGATAAAACTCATTCCTTCACTGATGATAGCATGGTTGAGTGGGCAAGGCCTTTGCTCGCGCGAGCATTGGAAAAGGGAAACTTTGATGGTCTTGTTGATGAAAGGTTGCAGAATGATTACAACTCCAGCGAAATGGCTCGTATGATTGCCTGCGCTGCTGCTTCTGTGCGTCATTCTGCCCGCCGTCGGCCAAAAATGAGCCAGGTACTTCGAGCTTTGGAAGGCAATCTTTCTCCAGATGAATTAAATGAAGGAGTTATACCAGGTCAAAGTATGATATACAGTTCCTCTGAAAGCACACGATACAGCACTCGTGAATACAAGGAAGACATGTTGAAATTTAGAAAGTTAGCACTAGAAAGCCAAGAGCTAGATGAAGGAATTAGTGAGACCAGTGGGCCCAGCAGTGATTTTGGCCAGCACCAATCTGCCTCTAGTGGTGAAGGCCGACAAACCAGTCAAGATACCGAACACGGGCCAATGGACAAAGACAGCCAAGACTATATACGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

552

Amino Acids

61.12

Weight (kDa)

8.63

Isoelectric Point (pI)

37.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	183 - 389	2.3e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	185 - 402	8.6e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001011)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24540 AT3G24550
fragaria_vesca	FvH4_1g04680 FvH4_1g04680 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540
malus_domestica	MD02G1045800.v1.1 MD15G1184000.v1.1 MD15G1318900.v1.1 MD17G1193400.v1.1
prunus_persica	Prupe.3G068800_v2.0.a1 Prupe.7G232200_v2.0.a1
pyrus_communis	pycom02g03820 pycom09g12790 pycom15g16560 pycom17g19940
rosa_chinensis	RchiOBHm_Chr2g0090291 RchiOBHm_Chr2g0138371 RchiOBHm_Chr2g0138381 RchiOBHm_Chr2g0138481 RchiOBHm_Chr2g0138511 RchiOBHm_Chr2g0138521 RchiOBHm_Chr2g0138601 RchiOBHm_Chr6g0297471
rosa_laevigata	RLG00000016095 RLG00000019740 RLG00000019744 RLG00000019747
rosa_multiflora	Rmu_co8232347.1_g000001 Rmu_co8362561.1_g000001 Rmu_sc0000436.1_g000004 Rmu_sc0001534.1_g000011 Rmu_sc0006235.1_g000002 Rmu_sc0008467.1_g000011 Rmu_sc0012206.1_g000004
rosa_roxburghii	Rroxscaffold_2G00106070 Rroxscaffold_2G00106140 Rroxscaffold_2G00106150 Rroxscaffold_2G00106280 Rroxscaffold_2G00151310
rosa_rugosa	Rorug02G0006300 Rorug02G0351700 Rorug06G0272400
rosa_samantha	Rh2AG052200 Rh2AG400100 Rh2AG400200 Rh2AG400800 Rh2CG386300 Rh2DG052100 Rh2DG419800 Rh2DG419900 Rh2DG420100 Rh2DG420600 Rh2DG421200
rosa_wichuraiana	Rw2G004470 Rw2G032550 Rw2G032580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1602
AccB7I	CCANNNNNTGG	1 cut(s)	488
AccBSI	CCGCTC	2 cut(s)	224, 323
AccII	CGCG	2 cut(s)	1205, 1207
AciI	CCGC	7 cut(s)	165, 222, 246, 310, 321, 476, 1327
AclWI	GGATC	3 cut(s)	311, 324, 865
AcoI	YGGCCR	3 cut(s)	830, 1334, 1561
AcsI	RAATTY	4 cut(s)	113, 665, 791, 1484
AcuI	CTGAAG	1 cut(s)	68
AfaI	GTAC	1 cut(s)	1353
AfiI	CCNNNNNNNGG	5 cut(s)	14, 488, 676, 1332, 1620
AflIII	ACRYGT	1 cut(s)	1476
AgsI	TTSAA	3 cut(s)	118, 683, 1483
AjnI	CCWGG	3 cut(s)	669, 1347, 1408
AluBI	AGCT	7 cut(s)	443, 634, 641, 1049, 1075, 1361, 1516
AluI	AGCT	7 cut(s)	443, 634, 641, 1049, 1075, 1361, 1516
Alw26I	GTCTC	3 cut(s)	412, 1018, 1529
AlwI	GGATC	3 cut(s)	311, 324, 865
AlwNI	CAGNNNCTG	1 cut(s)	91
AoxI	GGCC	8 cut(s)	744, 830, 1193, 1334, 1544, 1561, 1591, 1622
ApaI	GGGCCC	2 cut(s)	748, 1548
ApeKI	GCWGC	3 cut(s)	926, 1301, 1304
ApoI	RAATTY	4 cut(s)	113, 665, 791, 1484
AseI	ATTAAT	1 cut(s)	690
AspLEI	GCGC	2 cut(s)	1207, 1301
AspS9I	GGNCC	7 cut(s)	17, 154, 744, 745, 1544, 1545, 1622
AsuC2I	CCSGG	1 cut(s)	15
AsuHPI	GGTGA	4 cut(s)	50, 95, 123, 1598
AvaII	GGWCC	2 cut(s)	17, 154
BaeGI	GKGCMC	2 cut(s)	748, 1548
BaeI	ACNNNNGTAYC	2 cut(s)	996, 1029
BalI	TGGCCA	2 cut(s)	832, 1563
BamHI	GGATCC	1 cut(s)	316
BanII	GRGCYC	2 cut(s)	748, 1548
BarI	GAAGNNNNNNTAC	2 cut(s)	1389, 1421
BauI	CACGAG	1 cut(s)	1458
BbsI	GAAGAC	2 cut(s)	1087, 1479
BbvI	GCAGC	3 cut(s)	913, 1288, 1291
BccI	CCATC	2 cut(s)	63, 1226
BceAI	ACGGC	1 cut(s)	1314
BciT130I	CCWGG	3 cut(s)	671, 1349, 1410
BciVI	GTATCC	3 cut(s)	722, 997, 1034
BcnI	CCSGG	1 cut(s)	15
BcoDI	GTCTC	3 cut(s)	412, 1018, 1529
BfaI	CTAG	4 cut(s)	854, 1502, 1517, 1581
BfuI	GTATCC	3 cut(s)	722, 997, 1034
BisI	GCNGC	3 cut(s)	927, 1302, 1305
BlsI	GCNGC	3 cut(s)	928, 1303, 1306
Bme1390I	CCNGG	4 cut(s)	15, 671, 1349, 1410
Bme18I	GGWCC	2 cut(s)	17, 154
BmgT120I	GGNCC	7 cut(s)	17, 154, 744, 745, 1544, 1545, 1622
BmiI	GGNNCC	6 cut(s)	18, 19, 318, 745, 746, 1546
BmrFI	CCNGG	4 cut(s)	15, 671, 1349, 1410
BmsI	GCATC	3 cut(s)	103, 934, 1070
BpiI	GAAGAC	2 cut(s)	1087, 1479
BpmI	CTGGAG	2 cut(s)	1255, 1365
BpuMI	CCSGG	1 cut(s)	15
BsaI	GGTCTC	1 cut(s)	1529
BsaJI	CCNNGG	2 cut(s)	61, 786
BsaXI	ACNNNNNCTCC	2 cut(s)	118, 148
Bsc4I	CCNNNNNNNGG	5 cut(s)	14, 488, 676, 1332, 1620
Bse118I	RCCGGY	1 cut(s)	337
Bse1I	ACTGG	7 cut(s)	271, 304, 726, 1065, 1135, 1539, 1602
BseBI	CCWGG	3 cut(s)	671, 1349, 1410
BseDI	CCNNGG	2 cut(s)	61, 786
BseGI	GGATG	2 cut(s)	895, 1061
BseLI	CCNNNNNNNGG	5 cut(s)	14, 488, 676, 1332, 1620
BseMII	CTCAG	3 cut(s)	174, 195, 1090
BseNI	ACTGG	7 cut(s)	271, 304, 726, 1065, 1135, 1539, 1602
BseRI	GAGGAG	1 cut(s)	126
BseSI	GKGCMC	2 cut(s)	748, 1548
BseXI	GCAGC	3 cut(s)	913, 1288, 1291
BseYI	CCCAGC	3 cut(s)	481, 641, 1547
Bsh1236I	CGCG	2 cut(s)	1205, 1207
Bsh1285I	CGRYCG	1 cut(s)	342
BshFI	GGCC	8 cut(s)	746, 832, 1195, 1336, 1546, 1563, 1593, 1624
BsiEI	CGRYCG	1 cut(s)	342
BsiSI	CCGG	2 cut(s)	14, 338
BslFI	GGGAC	1 cut(s)	3
BslI	CCNNNNNNNGG	5 cut(s)	14, 488, 676, 1332, 1620
BsmAI	GTCTC	3 cut(s)	412, 1018, 1529
BsmBI	CGTCTC	1 cut(s)	412
BsmFI	GGGAC	1 cut(s)	3
BsmI	GAATGC	1 cut(s)	214
BsnI	GGCC	8 cut(s)	746, 832, 1195, 1336, 1546, 1563, 1593, 1624
Bso31I	GGTCTC	1 cut(s)	1529
Bsp120I	GGGCCC	2 cut(s)	744, 1544
Bsp1286I	GDGCHC	2 cut(s)	748, 1548
Bsp143I	GATC	3 cut(s)	316, 857, 903
Bsp19I	CCATGG	1 cut(s)	61
BspACI	CCGC	7 cut(s)	165, 222, 246, 310, 321, 476, 1327
BspANI	GGCC	8 cut(s)	746, 832, 1195, 1336, 1546, 1563, 1593, 1624
BspCNI	CTCAG	3 cut(s)	175, 196, 1089
BspFNI	CGCG	2 cut(s)	1205, 1207
BspLI	GGNNCC	6 cut(s)	18, 19, 318, 745, 746, 1546
BspPI	GGATC	3 cut(s)	311, 324, 865
BspTNI	GGTCTC	1 cut(s)	1529
BsrBI	CCGCTC	2 cut(s)	224, 323
BsrFI	RCCGGY	1 cut(s)	337
BsrI	ACTGG	7 cut(s)	271, 304, 726, 1065, 1135, 1539, 1602
BssAI	RCCGGY	1 cut(s)	337
BssECI	CCNNGG	2 cut(s)	61, 786
BssMI	GATC	3 cut(s)	316, 857, 903
BssSI	CACGAG	1 cut(s)	1458
BssT1I	CCWWGG	1 cut(s)	61
Bst2BI	CACGAG	1 cut(s)	1458
Bst2UI	CCWGG	3 cut(s)	671, 1349, 1410
Bst4CI	ACNGT	5 cut(s)	787, 893, 914, 1430, 1656
Bst6I	CTCTTC	1 cut(s)	44
BstAPI	GCANNNNNTGC	1 cut(s)	965
BstC8I	GCNNGC	5 cut(s)	1203, 1209, 1297, 1327, 1565
BstDEI	CTNAG	5 cut(s)	183, 204, 994, 1045, 1076
BstDSI	CCRYGG	2 cut(s)	61, 786
BstF5I	GGATG	2 cut(s)	895, 1061
BstFNI	CGCG	2 cut(s)	1205, 1207
BstHHI	GCGC	2 cut(s)	1207, 1301
BstKTI	GATC	3 cut(s)	319, 860, 906
BstMAI	GTCTC	3 cut(s)	412, 1018, 1529
BstMBI	GATC	3 cut(s)	316, 857, 903
BstMCI	CGRYCG	1 cut(s)	342
BstMWI	GCNNNNNNNGC	3 cut(s)	965, 989, 1301
BstNI	CCWGG	3 cut(s)	671, 1349, 1410
BstNSI	RCATGY	1 cut(s)	1480
BstSCI	CCNGG	4 cut(s)	13, 669, 1347, 1408
BstSLI	GKGCMC	2 cut(s)	748, 1548
BstUI	CGCG	2 cut(s)	1205, 1207
BstV1I	GCAGC	3 cut(s)	913, 1288, 1291
BstV2I	GAAGAC	2 cut(s)	1087, 1479
BstX2I	RGATCY	2 cut(s)	316, 857
BstXI	CCANNNNNNTGG	2 cut(s)	62, 1279
BstYI	RGATCY	2 cut(s)	316, 857
BsuI	GTATCC	3 cut(s)	722, 997, 1034
BsuRI	GGCC	8 cut(s)	746, 832, 1195, 1336, 1546, 1563, 1593, 1624
BtgI	CCRYGG	2 cut(s)	61, 786
BtsCI	GGATG	2 cut(s)	895, 1061
BtsI	GCAGTG	1 cut(s)	1558
BtsIMutI	CAGTG	7 cut(s)	382, 719, 1072, 1084, 1164, 1546, 1558
Cac8I	GCNNGC	5 cut(s)	1203, 1209, 1297, 1327, 1565
CaiI	CAGNNNCTG	1 cut(s)	91
CfoI	GCGC	2 cut(s)	1207, 1301
Cfr10I	RCCGGY	1 cut(s)	337
Cfr13I	GGNCC	7 cut(s)	17, 154, 744, 745, 1544, 1545, 1622
CseI	GACGC	1 cut(s)	1304
CsiI	ACCWGGT	1 cut(s)	1408
Csp6I	GTAC	1 cut(s)	1352
CviAII	CATG	8 cut(s)	62, 67, 529, 803, 884, 1010, 1177, 1477
CviQI	GTAC	1 cut(s)	1352
DdeI	CTNAG	5 cut(s)	183, 204, 994, 1045, 1076
DpnI	GATC	3 cut(s)	318, 859, 905
DpnII	GATC	3 cut(s)	316, 857, 903
DrdI	GACNNNNNNGTC	1 cut(s)	1602
DseDI	GACNNNNNNGTC	1 cut(s)	1602
EaeI	YGGCCR	3 cut(s)	830, 1334, 1561
Eam1104I	CTCTTC	1 cut(s)	44
EarI	CTCTTC	1 cut(s)	44
Eco130I	CCWWGG	1 cut(s)	61
Eco147I	AGGCCT	1 cut(s)	1195
Eco24I	GRGCYC	2 cut(s)	748, 1548
Eco31I	GGTCTC	1 cut(s)	1529
Eco47I	GGWCC	2 cut(s)	17, 154
Eco57I	CTGAAG	1 cut(s)	68
EcoO109I	RGGNCCY	2 cut(s)	17, 744
EcoRI	GAATTC	1 cut(s)	665
EcoRII	CCWGG	3 cut(s)	669, 1347, 1408
EcoT14I	CCWWGG	1 cut(s)	61
EcoT22I	ATGCAT	1 cut(s)	1063
EcoT38I	GRGCYC	2 cut(s)	748, 1548
ErhI	CCWWGG	1 cut(s)	61
Esp3I	CGTCTC	1 cut(s)	412
FaeI	CATG	8 cut(s)	65, 70, 532, 806, 887, 1013, 1180, 1480
FalI	AAGNNNNNCTT	8 cut(s)	585, 617, 977, 1009, 1211, 1243, 1359, 1391
FaqI	GGGAC	1 cut(s)	3
FatI	CATG	8 cut(s)	61, 66, 528, 802, 883, 1009, 1176, 1476
FauI	CCCGC	5 cut(s)	229, 253, 317, 328, 1334
FauNDI	CATATG	1 cut(s)	514
Fnu4HI	GCNGC	3 cut(s)	927, 1302, 1305
FokI	GGATG	2 cut(s)	882, 1048
FriOI	GRGCYC	2 cut(s)	748, 1548
Fsp4HI	GCNGC	3 cut(s)	927, 1302, 1305
FspBI	CTAG	4 cut(s)	854, 1502, 1517, 1581
GlaI	GCGC	2 cut(s)	1206, 1300
GluI	GCNGC	3 cut(s)	927, 1302, 1305
GsaI	CCCAGC	3 cut(s)	485, 645, 1551
GsuI	CTGGAG	2 cut(s)	1255, 1365
HaeIII	GGCC	8 cut(s)	746, 832, 1195, 1336, 1546, 1563, 1593, 1624
HapII	CCGG	2 cut(s)	14, 338
HgaI	GACGC	1 cut(s)	1304
HhaI	GCGC	2 cut(s)	1207, 1301
Hin1II	CATG	8 cut(s)	65, 70, 532, 806, 887, 1013, 1180, 1480
Hin6I	GCGC	2 cut(s)	1205, 1299
HinP1I	GCGC	2 cut(s)	1205, 1299
HinfI	GANTC	3 cut(s)	449, 543, 1107
HpaII	CCGG	2 cut(s)	14, 338
HphI	GGTGA	4 cut(s)	50, 95, 123, 1598
Hpy166II	GTNNAC	1 cut(s)	650
Hpy188I	TCNGA	9 cut(s)	87, 150, 201, 356, 417, 499, 1090, 1106, 1438
Hpy188III	TCNNGA	4 cut(s)	1052, 1382, 1460, 1607
Hpy8I	GTNNAC	1 cut(s)	650
Hpy99I	CGWCG	2 cut(s)	154, 1335
HpyAV	CCTTC	5 cut(s)	1171, 1361, 1391, 1517, 1583
HpyCH4III	ACNGT	5 cut(s)	787, 893, 914, 1430, 1656
HpyCH4V	TGCA	8 cut(s)	94, 623, 735, 802, 863, 968, 1061, 1255
HpyF10VI	GCNNNNNNNGC	3 cut(s)	965, 989, 1301
HpyF3I	CTNAG	5 cut(s)	183, 204, 994, 1045, 1076
Hsp92II	CATG	8 cut(s)	65, 70, 532, 806, 887, 1013, 1180, 1480
HspAI	GCGC	2 cut(s)	1205, 1299
KflI	GGGWCCC	1 cut(s)	17
Kzo9I	GATC	3 cut(s)	316, 857, 903
LmnI	GCTCC	4 cut(s)	229, 328, 658, 1054
Lsp1109I	GCAGC	3 cut(s)	913, 1288, 1291
LweI	GCATC	3 cut(s)	103, 934, 1070
MabI	ACCWGGT	1 cut(s)	1408
MaeI	CTAG	4 cut(s)	854, 1502, 1517, 1581
MaeIII	GTNAC	2 cut(s)	701, 914
MalI	GATC	3 cut(s)	318, 859, 905
MbiI	CCGCTC	2 cut(s)	224, 323
MboI	GATC	3 cut(s)	316, 857, 903
MflI	RGATCY	2 cut(s)	316, 857
MhlI	GDGCHC	2 cut(s)	748, 1548
MlsI	TGGCCA	2 cut(s)	832, 1563
MluNI	TGGCCA	2 cut(s)	832, 1563
MlyI	GAGTC	2 cut(s)	458, 1116
MmeI	TCCRAC	6 cut(s)	173, 224, 334, 573, 706, 801
Mox20I	TGGCCA	2 cut(s)	832, 1563
Mph1103I	ATGCAT	1 cut(s)	1063
MscI	TGGCCA	2 cut(s)	832, 1563
MseI	TTAA	3 cut(s)	627, 690, 1391
MslI	CAYNNNNRTG	2 cut(s)	60, 801
Msp20I	TGGCCA	2 cut(s)	832, 1563
MspA1I	CMGCKG	1 cut(s)	634
MspI	CCGG	2 cut(s)	14, 338
MspR9I	CCNGG	4 cut(s)	15, 671, 1349, 1410
Mva1269I	GAATGC	1 cut(s)	214
MvaI	CCWGG	3 cut(s)	671, 1349, 1410
MvnI	CGCG	2 cut(s)	1205, 1207
MwoI	GCNNNNNNNGC	3 cut(s)	965, 989, 1301
NciI	CCSGG	1 cut(s)	15
NcoI	CCATGG	1 cut(s)	61
NdeI	CATATG	1 cut(s)	514
NdeII	GATC	3 cut(s)	316, 857, 903
NlaIII	CATG	8 cut(s)	65, 70, 532, 806, 887, 1013, 1180, 1480
NlaIV	GGNNCC	6 cut(s)	18, 19, 318, 745, 746, 1546
NmuCI	GTSAC	2 cut(s)	701, 914
NsiI	ATGCAT	1 cut(s)	1063
NspI	RCATGY	1 cut(s)	1480
PceI	AGGCCT	1 cut(s)	1195
PciI	ACATGT	1 cut(s)	1476
PctI	GAATGC	1 cut(s)	214
PfeI	GAWTC	1 cut(s)	543
PflMI	CCANNNNNTGG	1 cut(s)	488
PkrI	GCNGC	3 cut(s)	928, 1303, 1306
PleI	GAGTC	2 cut(s)	457, 1115
PpsI	GAGTC	2 cut(s)	457, 1115
PpuMI	RGGWCCY	1 cut(s)	17
PscI	ACATGT	1 cut(s)	1476
PshBI	ATTAAT	1 cut(s)	690
Psp5II	RGGWCCY	1 cut(s)	17
Psp6I	CCWGG	3 cut(s)	669, 1347, 1408
PspFI	CCCAGC	3 cut(s)	481, 641, 1547
PspGI	CCWGG	3 cut(s)	669, 1347, 1408
PspN4I	GGNNCC	6 cut(s)	18, 19, 318, 745, 746, 1546
PspOMI	GGGCCC	2 cut(s)	744, 1544
PspPI	GGNCC	7 cut(s)	17, 154, 744, 745, 1544, 1545, 1622
PspPPI	RGGWCCY	1 cut(s)	17
PstNI	CAGNNNCTG	1 cut(s)	91
PsuI	RGATCY	2 cut(s)	316, 857
PvuII	CAGCTG	1 cut(s)	634
RsaI	GTAC	1 cut(s)	1353
RsaNI	GTAC	1 cut(s)	1352
RseI	CAYNNNNRTG	2 cut(s)	60, 801
SaqAI	TTAA	3 cut(s)	627, 690, 1391
SatI	GCNGC	3 cut(s)	927, 1302, 1305
Sau3AI	GATC	3 cut(s)	316, 857, 903
Sau96I	GGNCC	7 cut(s)	17, 154, 744, 745, 1544, 1545, 1622
SchI	GAGTC	2 cut(s)	458, 1116
ScrFI	CCNGG	4 cut(s)	15, 671, 1349, 1410
SduI	GDGCHC	2 cut(s)	748, 1548
SexAI	ACCWGGT	1 cut(s)	1408
SfaNI	GCATC	3 cut(s)	103, 934, 1070
SinI	GGWCC	2 cut(s)	17, 154
SmiMI	CAYNNNNRTG	2 cut(s)	60, 801
SseBI	AGGCCT	1 cut(s)	1195
SsiI	CCGC	7 cut(s)	165, 222, 246, 310, 321, 476, 1327
SspMI	CTAG	4 cut(s)	854, 1502, 1517, 1581
StuI	AGGCCT	1 cut(s)	1195
StyD4I	CCNGG	4 cut(s)	13, 669, 1347, 1408
StyI	CCWWGG	1 cut(s)	61
TaaI	ACNGT	5 cut(s)	787, 893, 914, 1430, 1656
TaqI	TCGA	1 cut(s)	1357
TfiI	GAWTC	1 cut(s)	543
Tru1I	TTAA	3 cut(s)	627, 690, 1391
Tru9I	TTAA	3 cut(s)	627, 690, 1391
TscAI	CASTG	7 cut(s)	382, 726, 1072, 1084, 1171, 1546, 1558
TseFI	GTSAC	2 cut(s)	701, 914
TseI	GCWGC	3 cut(s)	926, 1301, 1304
Tsp45I	GTSAC	2 cut(s)	701, 914
TspGWI	ACGGA	4 cut(s)	167, 436, 689, 1016
TspRI	CASTG	7 cut(s)	382, 726, 1072, 1084, 1171, 1546, 1558
Van91I	CCANNNNNTGG	1 cut(s)	488
VpaK11BI	GGWCC	2 cut(s)	17, 154
VspI	ATTAAT	1 cut(s)	690
XapI	RAATTY	4 cut(s)	113, 665, 791, 1484
XceI	RCATGY	1 cut(s)	1480
XcmI	CCANNNNNNNNNTGG	4 cut(s)	59, 784, 825, 1024
XspI	CTAG	4 cut(s)	854, 1502, 1517, 1581
Zsp2I	ATGCAT	1 cut(s)	1063

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.